CA2294053A1 - Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction - Google Patents

Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction Download PDF

Info

Publication number
CA2294053A1
CA2294053A1 CA002294053A CA2294053A CA2294053A1 CA 2294053 A1 CA2294053 A1 CA 2294053A1 CA 002294053 A CA002294053 A CA 002294053A CA 2294053 A CA2294053 A CA 2294053A CA 2294053 A1 CA2294053 A1 CA 2294053A1
Authority
CA
Canada
Prior art keywords
nucleotide
group
molecule
primer
ligand
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002294053A
Other languages
English (en)
Inventor
Tina Mcintosh
Steven Head
Philip Goelet
Michael T. Boyce-Jacino
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Orchid Cellmark Inc
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2294053A1 publication Critical patent/CA2294053A1/fr
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Physics & Mathematics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)

Abstract

L'invention se rapporte à des molécules et procédés permettant d'identifier de multiples sites polymorphes dans le génome d'une plante ou d'un animal. L'identification de ces sites est utilisée pour déterminer l'identité, l'ascendance, la prédisposition à une maladie génétique, la présence ou l'absence d'un trait souhaité, etc.
CA002294053A 1997-06-25 1998-06-24 Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction Abandoned CA2294053A1 (fr)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US88184597A 1997-06-25 1997-06-25
US08/881,845 1997-06-25
PCT/US1998/013042 WO1998059066A1 (fr) 1997-06-25 1998-06-24 Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction

Publications (1)

Publication Number Publication Date
CA2294053A1 true CA2294053A1 (fr) 1998-12-30

Family

ID=25379330

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002294053A Abandoned CA2294053A1 (fr) 1997-06-25 1998-06-24 Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction

Country Status (5)

Country Link
EP (1) EP0994960A1 (fr)
JP (1) JP2002508664A (fr)
AU (1) AU8162498A (fr)
CA (1) CA2294053A1 (fr)
WO (1) WO1998059066A1 (fr)

Families Citing this family (57)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6287766B1 (en) * 1997-10-28 2001-09-11 The Regents Of The University Of California DNA polymorphism identity determination using flow cytometry
WO2000056925A2 (fr) * 1999-03-19 2000-09-28 Aclara Biosciences, Inc. Techniques de detection de polymorphismes nucleotidiques uniques
US6403309B1 (en) 1999-03-19 2002-06-11 Valigen (Us), Inc. Methods for detection of nucleic acid polymorphisms using peptide-labeled oligonucleotides and antibody arrays
ATE386819T1 (de) * 1999-04-09 2008-03-15 Keygene Nv Verfahren zur analyse von aflp reaktionsmischungen unter verwendung von primer verlängerungstechniken
US6573047B1 (en) 1999-04-13 2003-06-03 Dna Sciences, Inc. Detection of nucleotide sequence variation through fluorescence resonance energy transfer label generation
US20060275782A1 (en) 1999-04-20 2006-12-07 Illumina, Inc. Detection of nucleic acid reactions on bead arrays
WO2001040520A1 (fr) 1999-12-02 2001-06-07 Dna Sciences, Inc. Procedes de determination de variations de nucleotides simples et genotypage
US6762018B1 (en) * 1999-12-23 2004-07-13 Tetragen Sa Analysis of nucleotide polymorphisms at a site
US6355433B1 (en) 2000-06-02 2002-03-12 Dna Sciences, Inc. Determination of nucleotide sequence variations through limited primer extension
US7846733B2 (en) 2000-06-26 2010-12-07 Nugen Technologies, Inc. Methods and compositions for transcription-based nucleic acid amplification
US20040072200A1 (en) * 2000-11-13 2004-04-15 Rudolf Rigler Detection of nucleic acid polymorphisms
JP2005503755A (ja) 2000-12-13 2005-02-10 ニューゲン テクノロジーズ， インコーポレイテッド 核酸配列の複数コピーを作製するための方法および組成物、ならびにそれらを検出する方法
US20020142336A1 (en) * 2001-02-02 2002-10-03 Genome Therapeutics Corporation Methods for determining a nucleotide at a specific location within a nucleic acid molecule
AU2002252279B2 (en) 2001-03-09 2005-05-12 Nugen Technologies, Inc. Methods and compositions for amplification of RNA sequences
GB0205455D0 (en) 2002-03-07 2002-04-24 Molecular Sensing Plc Nucleic acid probes, their synthesis and use
WO2003093502A2 (fr) * 2002-04-30 2003-11-13 Gnothis Holding Sa Identification multiplex de polymorphismes d'acide nucleique
DE10245145B4 (de) * 2002-09-27 2004-12-02 IPK-Institut für Pflanzengenetik und Kulturpflanzenforschung Verfahren zum Nachweis von SNPs auf polydimensionalen Microarrays
JP3867926B2 (ja) 2002-10-29 2007-01-17 独立行政法人理化学研究所 核酸の増幅法
SE0300965D0 (sv) * 2003-04-02 2003-04-02 Dynamic Code Ab Metod att påvisa mutationer
AU2004230494A1 (en) 2003-04-14 2004-10-28 Nugen Technologies, Inc. Global amplification using a randomly primed composite primer
US20040259100A1 (en) 2003-06-20 2004-12-23 Illumina, Inc. Methods and compositions for whole genome amplification and genotyping
WO2005063977A1 (fr) 2003-12-25 2005-07-14 Riken Procede d'amplification d'acides nucleiques et procede de detection d'acides nucleiques mutes l'utilisant
WO2005080604A2 (fr) * 2004-02-12 2005-09-01 Compass Genetics, Llc Analyse genetique par tri specifique de sequences
US7702466B1 (en) 2004-06-29 2010-04-20 Illumina, Inc. Systems and methods for selection of nucleic acid sequence probes
US7393665B2 (en) 2005-02-10 2008-07-01 Population Genetics Technologies Ltd Methods and compositions for tagging and identifying polynucleotides
AU2006248189A1 (en) 2005-05-20 2006-11-23 Synergenz Bioscience Limited Methods of analysis of polymorphisms and uses thereof
US7939258B2 (en) 2005-09-07 2011-05-10 Nugen Technologies, Inc. Nucleic acid amplification procedure using RNA and DNA composite primers
US7329860B2 (en) 2005-11-23 2008-02-12 Illumina, Inc. Confocal imaging methods and apparatus
US20090291440A1 (en) * 2006-05-24 2009-11-26 Ken Hirano Method for synthesizing nucleic acid using dna polymerase beta and single molecule sequencing method
EP2514841A1 (fr) 2008-01-25 2012-10-24 Theranostics Laboratory Procédés et composition pour évaluer la réponse aux médicaments
US8034568B2 (en) 2008-02-12 2011-10-11 Nugen Technologies, Inc. Isothermal nucleic acid amplification methods and compositions
US7846666B2 (en) 2008-03-21 2010-12-07 Nugen Technologies, Inc. Methods of RNA amplification in the presence of DNA
PL2531880T3 (pl) 2010-02-01 2017-09-29 Illumina Inc. Sposoby ogniskowania oraz układy optyczne i zespoły optyczne realizujące te sposoby
CN202281746U (zh) 2010-03-06 2012-06-20 伊鲁米那股份有限公司 检测来自样品光信号的测定设备及其光学组件和光学系统
US8951781B2 (en) 2011-01-10 2015-02-10 Illumina, Inc. Systems, methods, and apparatuses to image a sample for biological or chemical analysis
CA3106132C (fr) * 2011-05-12 2023-08-29 Ande Corporation Procedes et compositions destines a l'amplification multiplex rapide de loci de sequences courtes repetees en tandem
EP3290528B1 (fr) 2011-09-23 2019-08-14 Illumina, Inc. Procédés et compositions de séquençage d'acide nucléique
US10378051B2 (en) 2011-09-29 2019-08-13 Illumina Cambridge Limited Continuous extension and deblocking in reactions for nucleic acids synthesis and sequencing
US9200274B2 (en) 2011-12-09 2015-12-01 Illumina, Inc. Expanded radix for polymeric tags
NL2017959B1 (en) 2016-12-08 2018-06-19 Illumina Inc Cartridge assembly
EP3699577B1 (fr) 2012-08-20 2023-11-08 Illumina, Inc. Système de séquençage basé sur la durée de vie de la fluorescence
US9193998B2 (en) 2013-03-15 2015-11-24 Illumina, Inc. Super resolution imaging
CA2914248C (fr) 2013-07-03 2021-09-07 Illumina, Inc. Sequencage par synthese orthogonale
EP3274692B1 (fr) 2015-03-24 2022-08-10 Illumina, Inc. Procédés pour l'imagerie d'échantillons pour une analyse biologique ou chimique
RU2742955C2 (ru) 2015-07-30 2021-02-12 Иллюмина, Инк. Ортогональное деблокирование нуклеотидов
EP3377226B1 (fr) 2016-03-28 2021-02-17 Illumina, Inc. Micro-réseaux multi-plans
WO2018064116A1 (fr) 2016-09-28 2018-04-05 Illumina, Inc. Procédés et systèmes de traitement de données
TWI781669B (zh) 2016-10-14 2022-10-21 美商伊路米納有限公司 卡匣總成
EP3596099A4 (fr) 2017-03-06 2020-12-09 Singular Genomics Systems, Inc. Méthodes de séquençage par synthèse (sbs) d'acides nucléiques combinant des étapes à cycles sbs
AU2018237331B2 (en) 2017-03-24 2022-02-03 Gen-Probe Incorporated Compositions and methods for detection of viral pathogens in samples
BR112019027603A2 (pt) 2018-03-09 2020-11-10 Illumina, Inc. sequenciamento estocástico generalizado de super-resolução
US11421271B2 (en) 2019-03-28 2022-08-23 Illumina Cambridge Limited Methods and compositions for nucleic acid sequencing using photoswitchable labels
EP4174189A1 (fr) 2021-10-28 2023-05-03 Volker, Leen Étiquetage des biomolécules dirigé par les enzymes
WO2023122363A1 (fr) 2021-12-23 2023-06-29 Illumina Software, Inc. Résumés dynamiques d'état graphique pour séquençage de nucléotides
US20230215515A1 (en) 2021-12-23 2023-07-06 Illumina Software, Inc. Facilitating secure execution of external workflows for genomic sequencing diagnostics
WO2023129764A1 (fr) 2021-12-29 2023-07-06 Illumina Software, Inc. Permutation automatique des versions de modèle d'analyse de variants pour les applications d'analyse génomique
BE1030246B1 (nl) 2022-02-04 2023-09-04 Leen Volker Polymeer geassisteerde biomolecule analyse

Family Cites Families (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6004744A (en) * 1991-03-05 1999-12-21 Molecular Tool, Inc. Method for determining nucleotide identity through extension of immobilized primer
US5610287A (en) * 1993-12-06 1997-03-11 Molecular Tool, Inc. Method for immobilizing nucleic acid molecules

Also Published As

Publication number Publication date
AU8162498A (en) 1999-01-04
EP0994960A1 (fr) 2000-04-26
JP2002508664A (ja) 2002-03-19
WO1998059066A1 (fr) 1998-12-30

Similar Documents

Publication Publication Date Title
CA2294053A1 (fr) Procedes permettant de deceler de multiples polymorphismes a nucleotide unique grace a une seule reaction
US20020094525A1 (en) Methods for the detection of multiple single nucleotide polymorphisms in a single reaction
US5679524A (en) Ligase/polymerase mediated genetic bit analysis of single nucleotide polymorphisms and its use in genetic analysis
Ahmadian et al. Single-nucleotide polymorphism analysis by pyrosequencing
US6294336B1 (en) Method for analyzing the nucleotide sequence of a polynucleotide by oligonucleotide extension on an array
JP4422897B2 (ja) 核酸を検出するためのプライマ伸長法
US6004783A (en) Cleaved amplified RFLP detection methods
US5888778A (en) High-throughput screening method for identification of genetic mutations or disease-causing microorganisms using segmented primers
Delahunty et al. Testing the feasibility of DNA typing for human identification by PCR and an oligonucleotide ligation assay.
EP1256632A2 (fr) Criblage à haut rendement de polymorphismes
US20050191636A1 (en) Detection of STRP, such as fragile X syndrome
EP0948645A1 (fr) Procedes de detection des fragments de restriction polymorphes (rfpl) amplifies et clives
US20030077584A1 (en) Methods and compositons for bi-directional polymorphism detection
Gut An overview of genotyping and single nucleotide polymorphisms (SNP)
Li et al. Tag/anti-tag liquid-phase primer extension array: a flexible and versatile genotyping platform
KR101075392B1 (ko) Ｆｇａ 유전자로부터 유래된 단일염기다형을 포함하는 폴리뉴클레오티드, 이를 포함하는 마이크로어레이 및 진단키트, 이를 이용한 검출 방법
US20080189800A1 (en) Certain human genomic DNA associated with total red-green colorblindness
Gut and Single Nucleotide Polymorphisms (SNP)

Legal Events

Date Code Title Description
FZDE Discontinued