AU2022344243A1 - Methods and compositions for modulating a genome - Google Patents
Methods and compositions for modulating a genome Download PDFInfo
- Publication number
- AU2022344243A1 AU2022344243A1 AU2022344243A AU2022344243A AU2022344243A1 AU 2022344243 A1 AU2022344243 A1 AU 2022344243A1 AU 2022344243 A AU2022344243 A AU 2022344243A AU 2022344243 A AU2022344243 A AU 2022344243A AU 2022344243 A1 AU2022344243 A1 AU 2022344243A1
- Authority
- AU
- Australia
- Prior art keywords
- sequence
- domain
- nucleic acid
- gene
- dna
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Pending
Links
- 238000000034 method Methods 0.000 title claims abstract description 72
- 239000000203 mixture Substances 0.000 title abstract description 17
- 108090000623 proteins and genes Proteins 0.000 claims description 573
- 108090000765 processed proteins & peptides Proteins 0.000 claims description 416
- 229920001184 polypeptide Polymers 0.000 claims description 404
- 102000004196 processed proteins & peptides Human genes 0.000 claims description 404
- 150000007523 nucleic acids Chemical class 0.000 claims description 319
- 102000039446 nucleic acids Human genes 0.000 claims description 266
- 108020004707 nucleic acids Proteins 0.000 claims description 266
- 108091032973 (ribonucleotides)n+m Proteins 0.000 claims description 262
- 210000004027 cell Anatomy 0.000 claims description 225
- 108020004414 DNA Proteins 0.000 claims description 210
- 108020005004 Guide RNA Proteins 0.000 claims description 182
- 230000035772 mutation Effects 0.000 claims description 135
- 108091033409 CRISPR Proteins 0.000 claims description 133
- 108091028043 Nucleic acid sequence Proteins 0.000 claims description 110
- 125000003275 alpha amino acid group Chemical group 0.000 claims description 75
- 230000027455 binding Effects 0.000 claims description 62
- 108010008532 Deoxyribonuclease I Proteins 0.000 claims description 60
- 102000007260 Deoxyribonuclease I Human genes 0.000 claims description 60
- 125000006850 spacer group Chemical group 0.000 claims description 48
- -1 DNA or RNA Chemical class 0.000 claims description 41
- 210000004899 c-terminal region Anatomy 0.000 claims description 24
- 230000000295 complement effect Effects 0.000 claims description 15
- 241000282414 Homo sapiens Species 0.000 claims description 11
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims description 11
- 201000010099 disease Diseases 0.000 claims description 10
- 108020004999 messenger RNA Proteins 0.000 claims description 9
- 230000009395 genetic defect Effects 0.000 claims description 8
- 210000005260 human cell Anatomy 0.000 claims description 8
- 230000007547 defect Effects 0.000 claims description 2
- 102100034343 Integrase Human genes 0.000 description 198
- 108010092799 RNA-directed DNA polymerase Proteins 0.000 description 182
- 108010042407 Endonucleases Proteins 0.000 description 163
- 102100031780 Endonuclease Human genes 0.000 description 158
- 102000004169 proteins and genes Human genes 0.000 description 147
- 235000018102 proteins Nutrition 0.000 description 143
- 125000003729 nucleotide group Chemical group 0.000 description 114
- 239000002773 nucleotide Substances 0.000 description 108
- 230000004568 DNA-binding Effects 0.000 description 95
- 230000004048 modification Effects 0.000 description 90
- 238000012986 modification Methods 0.000 description 90
- 230000000694 effects Effects 0.000 description 79
- 238000006467 substitution reaction Methods 0.000 description 75
- 235000001014 amino acid Nutrition 0.000 description 71
- 108010073062 Transcription Activator-Like Effectors Proteins 0.000 description 64
- 239000011701 zinc Substances 0.000 description 62
- 150000001413 amino acids Chemical class 0.000 description 59
- 239000012634 fragment Substances 0.000 description 55
- 210000001519 tissue Anatomy 0.000 description 55
- 238000012217 deletion Methods 0.000 description 53
- 230000037430 deletion Effects 0.000 description 53
- 238000003780 insertion Methods 0.000 description 53
- 230000037431 insertion Effects 0.000 description 53
- 125000005647 linker group Chemical group 0.000 description 53
- 230000000875 corresponding effect Effects 0.000 description 44
- 102000053602 DNA Human genes 0.000 description 38
- 230000017730 intein-mediated protein splicing Effects 0.000 description 36
- 238000010839 reverse transcription Methods 0.000 description 34
- 230000004570 RNA-binding Effects 0.000 description 31
- 239000012636 effector Substances 0.000 description 31
- 230000006870 function Effects 0.000 description 29
- 230000014509 gene expression Effects 0.000 description 29
- 108010077850 Nuclear Localization Signals Proteins 0.000 description 28
- HCHKCACWOHOZIP-UHFFFAOYSA-N Zinc Chemical compound [Zn] HCHKCACWOHOZIP-UHFFFAOYSA-N 0.000 description 25
- 230000004807 localization Effects 0.000 description 25
- 229910052725 zinc Inorganic materials 0.000 description 25
- 102000053642 Catalytic RNA Human genes 0.000 description 24
- 108090000994 Catalytic RNA Proteins 0.000 description 24
- 102000007999 Nuclear Proteins Human genes 0.000 description 24
- 108010089610 Nuclear Proteins Proteins 0.000 description 24
- 108091092562 ribozyme Proteins 0.000 description 24
- 230000015572 biosynthetic process Effects 0.000 description 23
- 239000013598 vector Substances 0.000 description 23
- 238000010362 genome editing Methods 0.000 description 21
- 102000016928 DNA-directed DNA polymerase Human genes 0.000 description 20
- 108010014303 DNA-directed DNA polymerase Proteins 0.000 description 20
- 230000004927 fusion Effects 0.000 description 20
- 238000010453 CRISPR/Cas method Methods 0.000 description 19
- 108091028113 Trans-activating crRNA Proteins 0.000 description 19
- 230000010354 integration Effects 0.000 description 19
- 238000000338 in vitro Methods 0.000 description 18
- 101710163270 Nuclease Proteins 0.000 description 17
- 238000003776 cleavage reaction Methods 0.000 description 17
- 210000004962 mammalian cell Anatomy 0.000 description 17
- 230000007017 scission Effects 0.000 description 17
- 239000013603 viral vector Substances 0.000 description 17
- 210000004940 nucleus Anatomy 0.000 description 15
- 230000001177 retroviral effect Effects 0.000 description 15
- 230000000903 blocking effect Effects 0.000 description 14
- 239000013615 primer Substances 0.000 description 14
- 101710203526 Integrase Proteins 0.000 description 13
- 230000001419 dependent effect Effects 0.000 description 13
- 238000005755 formation reaction Methods 0.000 description 13
- 239000003446 ligand Substances 0.000 description 13
- 238000004519 manufacturing process Methods 0.000 description 13
- 108091026890 Coding region Proteins 0.000 description 12
- 102000004190 Enzymes Human genes 0.000 description 12
- 108090000790 Enzymes Proteins 0.000 description 12
- 230000003197 catalytic effect Effects 0.000 description 12
- OPTASPLRGRRNAP-UHFFFAOYSA-N cytosine Chemical compound NC=1C=CNC(=O)N=1 OPTASPLRGRRNAP-UHFFFAOYSA-N 0.000 description 12
- UYTPUPDQBNUYGX-UHFFFAOYSA-N guanine Chemical compound O=C1NC(N)=NC2=C1N=CN2 UYTPUPDQBNUYGX-UHFFFAOYSA-N 0.000 description 12
- 230000001939 inductive effect Effects 0.000 description 12
- 239000002679 microRNA Substances 0.000 description 12
- 230000001105 regulatory effect Effects 0.000 description 12
- RWQNBRDOKXIBIV-UHFFFAOYSA-N thymine Chemical compound CC1=CNC(=O)NC1=O RWQNBRDOKXIBIV-UHFFFAOYSA-N 0.000 description 12
- 239000003550 marker Substances 0.000 description 11
- RYYWUUFWQRZTIU-UHFFFAOYSA-K thiophosphate Chemical compound [O-]P([O-])([O-])=S RYYWUUFWQRZTIU-UHFFFAOYSA-K 0.000 description 11
- 230000014616 translation Effects 0.000 description 11
- 238000011144 upstream manufacturing Methods 0.000 description 11
- 102000040650 (ribonucleotides)n+m Human genes 0.000 description 10
- 241000700605 Viruses Species 0.000 description 10
- 238000013459 approach Methods 0.000 description 10
- 230000005782 double-strand break Effects 0.000 description 10
- 230000001965 increasing effect Effects 0.000 description 10
- 230000030648 nucleus localization Effects 0.000 description 10
- 230000002441 reversible effect Effects 0.000 description 10
- 238000003786 synthesis reaction Methods 0.000 description 10
- 238000013519 translation Methods 0.000 description 10
- 108700028369 Alleles Proteins 0.000 description 9
- 108700011259 MicroRNAs Proteins 0.000 description 9
- 101000910035 Streptococcus pyogenes serotype M1 CRISPR-associated endonuclease Cas9/Csn1 Proteins 0.000 description 9
- 230000004075 alteration Effects 0.000 description 9
- 239000003623 enhancer Substances 0.000 description 9
- 239000013612 plasmid Substances 0.000 description 9
- 108091028075 Circular RNA Proteins 0.000 description 8
- 102100029766 DNA polymerase theta Human genes 0.000 description 8
- 230000033616 DNA repair Effects 0.000 description 8
- 108091007494 Nucleic acid- binding domains Proteins 0.000 description 8
- 241000193996 Streptococcus pyogenes Species 0.000 description 8
- 230000007423 decrease Effects 0.000 description 8
- 238000006116 polymerization reaction Methods 0.000 description 8
- 230000008569 process Effects 0.000 description 8
- RXWNCPJZOCPEPQ-NVWDDTSBSA-N puromycin Chemical compound C1=CC(OC)=CC=C1C[C@H](N)C(=O)N[C@H]1[C@@H](O)[C@H](N2C3=NC=NC(=C3N=C2)N(C)C)O[C@@H]1CO RXWNCPJZOCPEPQ-NVWDDTSBSA-N 0.000 description 8
- 238000012216 screening Methods 0.000 description 8
- 230000035897 transcription Effects 0.000 description 8
- 238000013518 transcription Methods 0.000 description 8
- 230000003612 virological effect Effects 0.000 description 8
- 208000031886 HIV Infections Diseases 0.000 description 7
- 101001094659 Homo sapiens DNA polymerase kappa Proteins 0.000 description 7
- 101000865085 Homo sapiens DNA polymerase theta Proteins 0.000 description 7
- 108091092195 Intron Proteins 0.000 description 7
- 241000713869 Moloney murine leukemia virus Species 0.000 description 7
- 108020005067 RNA Splice Sites Proteins 0.000 description 7
- 108091028664 Ribonucleotide Proteins 0.000 description 7
- 210000000805 cytoplasm Anatomy 0.000 description 7
- 230000003247 decreasing effect Effects 0.000 description 7
- 108020001507 fusion proteins Proteins 0.000 description 7
- 102000037865 fusion proteins Human genes 0.000 description 7
- 238000001727 in vivo Methods 0.000 description 7
- 208000015181 infectious disease Diseases 0.000 description 7
- 238000005304 joining Methods 0.000 description 7
- 239000002245 particle Substances 0.000 description 7
- 239000002336 ribonucleotide Substances 0.000 description 7
- 125000002652 ribonucleotide group Chemical group 0.000 description 7
- 238000012163 sequencing technique Methods 0.000 description 7
- 230000008685 targeting Effects 0.000 description 7
- 229930024421 Adenine Natural products 0.000 description 6
- GFFGJBXGBJISGV-UHFFFAOYSA-N Adenine Chemical compound NC1=NC=NC2=C1N=CN2 GFFGJBXGBJISGV-UHFFFAOYSA-N 0.000 description 6
- 108010040467 CRISPR-Associated Proteins Proteins 0.000 description 6
- 102220605874 Cytosolic arginine sensor for mTORC1 subunit 2_D10A_mutation Human genes 0.000 description 6
- 241000713772 Human immunodeficiency virus 1 Species 0.000 description 6
- 208000009869 Neu-Laxova syndrome Diseases 0.000 description 6
- 238000007792 addition Methods 0.000 description 6
- 229960000643 adenine Drugs 0.000 description 6
- 108010013829 alpha subunit DNA polymerase III Proteins 0.000 description 6
- 229940104302 cytosine Drugs 0.000 description 6
- 125000002637 deoxyribonucleotide group Chemical group 0.000 description 6
- 239000000539 dimer Substances 0.000 description 6
- 239000013604 expression vector Substances 0.000 description 6
- 150000002632 lipids Chemical class 0.000 description 6
- 239000002105 nanoparticle Substances 0.000 description 6
- 210000000056 organ Anatomy 0.000 description 6
- 108091008146 restriction endonucleases Proteins 0.000 description 6
- 241000894007 species Species 0.000 description 6
- 229940113082 thymine Drugs 0.000 description 6
- 108091093088 Amplicon Proteins 0.000 description 5
- 108091023037 Aptamer Proteins 0.000 description 5
- 102000004533 Endonucleases Human genes 0.000 description 5
- 108010061833 Integrases Proteins 0.000 description 5
- 239000004698 Polyethylene Substances 0.000 description 5
- 241000194020 Streptococcus thermophilus Species 0.000 description 5
- 108091023040 Transcription factor Proteins 0.000 description 5
- 102000040945 Transcription factor Human genes 0.000 description 5
- 108091023045 Untranslated Region Proteins 0.000 description 5
- 101710185494 Zinc finger protein Proteins 0.000 description 5
- 102100023597 Zinc finger protein 816 Human genes 0.000 description 5
- 238000003556 assay Methods 0.000 description 5
- 230000008859 change Effects 0.000 description 5
- 230000001268 conjugating effect Effects 0.000 description 5
- 238000013461 design Methods 0.000 description 5
- 238000004520 electroporation Methods 0.000 description 5
- 230000001747 exhibiting effect Effects 0.000 description 5
- 230000002068 genetic effect Effects 0.000 description 5
- 238000009396 hybridization Methods 0.000 description 5
- 238000010348 incorporation Methods 0.000 description 5
- 239000000178 monomer Substances 0.000 description 5
- 239000000546 pharmaceutical excipient Substances 0.000 description 5
- 230000037452 priming Effects 0.000 description 5
- 230000008439 repair process Effects 0.000 description 5
- 241000713838 Avian myeloblastosis virus Species 0.000 description 4
- 241000894006 Bacteria Species 0.000 description 4
- DWRXFEITVBNRMK-UHFFFAOYSA-N Beta-D-1-Arabinofuranosylthymine Natural products O=C1NC(=O)C(C)=CN1C1C(O)C(O)C(CO)O1 DWRXFEITVBNRMK-UHFFFAOYSA-N 0.000 description 4
- 108700004991 Cas12a Proteins 0.000 description 4
- 108020004705 Codon Proteins 0.000 description 4
- 241000196324 Embryophyta Species 0.000 description 4
- 101000889900 Enterobacteria phage T4 Intron-associated endonuclease 1 Proteins 0.000 description 4
- 108060002716 Exonuclease Proteins 0.000 description 4
- 238000012156 HITS-CLIP Methods 0.000 description 4
- 241000714177 Murine leukemia virus Species 0.000 description 4
- 108700026244 Open Reading Frames Proteins 0.000 description 4
- 108091093037 Peptide nucleic acid Proteins 0.000 description 4
- 108010008281 Recombinant Fusion Proteins Proteins 0.000 description 4
- 102000007056 Recombinant Fusion Proteins Human genes 0.000 description 4
- 241000714474 Rous sarcoma virus Species 0.000 description 4
- 230000003115 biocidal effect Effects 0.000 description 4
- 108091092356 cellular DNA Proteins 0.000 description 4
- 238000007385 chemical modification Methods 0.000 description 4
- 239000002299 complementary DNA Substances 0.000 description 4
- 239000003937 drug carrier Substances 0.000 description 4
- 108010050663 endodeoxyribonuclease CreI Proteins 0.000 description 4
- 102000013165 exonuclease Human genes 0.000 description 4
- 102000034287 fluorescent proteins Human genes 0.000 description 4
- 108091006047 fluorescent proteins Proteins 0.000 description 4
- 238000012239 gene modification Methods 0.000 description 4
- 230000001976 improved effect Effects 0.000 description 4
- 238000000126 in silico method Methods 0.000 description 4
- 230000003993 interaction Effects 0.000 description 4
- 230000000670 limiting effect Effects 0.000 description 4
- 108091070501 miRNA Proteins 0.000 description 4
- 229950010131 puromycin Drugs 0.000 description 4
- 230000001225 therapeutic effect Effects 0.000 description 4
- 230000002103 transcriptional effect Effects 0.000 description 4
- 238000001890 transfection Methods 0.000 description 4
- 238000012546 transfer Methods 0.000 description 4
- 239000001226 triphosphate Substances 0.000 description 4
- 241001430294 unidentified retrovirus Species 0.000 description 4
- 229940045145 uridine Drugs 0.000 description 4
- OGHAROSJZRTIOK-KQYNXXCUSA-O 7-methylguanosine Chemical compound C1=2N=C(N)NC(=O)C=2[N+](C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O OGHAROSJZRTIOK-KQYNXXCUSA-O 0.000 description 3
- 102100035875 C-C chemokine receptor type 5 Human genes 0.000 description 3
- 108090000565 Capsid Proteins Proteins 0.000 description 3
- 102100023321 Ceruloplasmin Human genes 0.000 description 3
- 238000001353 Chip-sequencing Methods 0.000 description 3
- 108700010070 Codon Usage Proteins 0.000 description 3
- 101100300807 Drosophila melanogaster spn-A gene Proteins 0.000 description 3
- 101710091045 Envelope protein Proteins 0.000 description 3
- 108091029865 Exogenous DNA Proteins 0.000 description 3
- 108700024394 Exon Proteins 0.000 description 3
- 229940123611 Genome editing Drugs 0.000 description 3
- 241000714260 Human T-lymphotropic virus 1 Species 0.000 description 3
- 102100034349 Integrase Human genes 0.000 description 3
- 101710188315 Protein X Proteins 0.000 description 3
- 229930185560 Pseudouridine Natural products 0.000 description 3
- PTJWIQPHWPFNBW-UHFFFAOYSA-N Pseudouridine C Natural products OC1C(O)C(CO)OC1C1=CNC(=O)NC1=O PTJWIQPHWPFNBW-UHFFFAOYSA-N 0.000 description 3
- 108091046869 Telomeric non-coding RNA Proteins 0.000 description 3
- 241000589634 Xanthomonas Species 0.000 description 3
- 230000004913 activation Effects 0.000 description 3
- 238000000137 annealing Methods 0.000 description 3
- WGDUUQDYDIIBKT-UHFFFAOYSA-N beta-Pseudouridine Natural products OC1OC(CN2C=CC(=O)NC2=O)C(O)C1O WGDUUQDYDIIBKT-UHFFFAOYSA-N 0.000 description 3
- 238000004113 cell culture Methods 0.000 description 3
- 230000001413 cellular effect Effects 0.000 description 3
- 239000003795 chemical substances by application Substances 0.000 description 3
- 210000000349 chromosome Anatomy 0.000 description 3
- 239000005547 deoxyribonucleotide Substances 0.000 description 3
- 238000010586 diagram Methods 0.000 description 3
- 230000011559 double-strand break repair via nonhomologous end joining Effects 0.000 description 3
- 238000005516 engineering process Methods 0.000 description 3
- 230000002708 enhancing effect Effects 0.000 description 3
- 230000008676 import Effects 0.000 description 3
- 230000002458 infectious effect Effects 0.000 description 3
- 230000007246 mechanism Effects 0.000 description 3
- 230000001404 mediated effect Effects 0.000 description 3
- 230000037361 pathway Effects 0.000 description 3
- 239000008194 pharmaceutical composition Substances 0.000 description 3
- 239000013600 plasmid vector Substances 0.000 description 3
- 230000008488 polyadenylation Effects 0.000 description 3
- 102000040430 polynucleotide Human genes 0.000 description 3
- 108091033319 polynucleotide Proteins 0.000 description 3
- 239000002157 polynucleotide Substances 0.000 description 3
- 230000002028 premature Effects 0.000 description 3
- PTJWIQPHWPFNBW-GBNDHIKLSA-N pseudouridine Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1C1=CNC(=O)NC1=O PTJWIQPHWPFNBW-GBNDHIKLSA-N 0.000 description 3
- 102200028520 rs1057520297 Human genes 0.000 description 3
- 102200054079 rs121907976 Human genes 0.000 description 3
- 102200111286 rs2234704 Human genes 0.000 description 3
- 102220057650 rs730881913 Human genes 0.000 description 3
- 102220242537 rs762217448 Human genes 0.000 description 3
- 102200078515 rs779270933 Human genes 0.000 description 3
- 239000000523 sample Substances 0.000 description 3
- 239000000126 substance Substances 0.000 description 3
- 230000009897 systematic effect Effects 0.000 description 3
- 238000004885 tandem mass spectrometry Methods 0.000 description 3
- 230000007704 transition Effects 0.000 description 3
- 235000011178 triphosphate Nutrition 0.000 description 3
- 108020005345 3' Untranslated Regions Proteins 0.000 description 2
- 108020003589 5' Untranslated Regions Proteins 0.000 description 2
- ZAYHVCMSTBRABG-UHFFFAOYSA-N 5-Methylcytidine Natural products O=C1N=C(N)C(C)=CN1C1C(O)C(O)C(CO)O1 ZAYHVCMSTBRABG-UHFFFAOYSA-N 0.000 description 2
- ZXIATBNUWJBBGT-JXOAFFINSA-N 5-methoxyuridine Chemical compound O=C1NC(=O)C(OC)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 ZXIATBNUWJBBGT-JXOAFFINSA-N 0.000 description 2
- ZAYHVCMSTBRABG-JXOAFFINSA-N 5-methylcytidine Chemical compound O=C1N=C(N)C(C)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 ZAYHVCMSTBRABG-JXOAFFINSA-N 0.000 description 2
- 241000702423 Adeno-associated virus - 2 Species 0.000 description 2
- 241000203069 Archaea Species 0.000 description 2
- 101710148099 Blue fluorescence protein Proteins 0.000 description 2
- 241000283690 Bos taurus Species 0.000 description 2
- 241000713704 Bovine immunodeficiency virus Species 0.000 description 2
- 241000714266 Bovine leukemia virus Species 0.000 description 2
- 101710149870 C-C chemokine receptor type 5 Proteins 0.000 description 2
- 101710132601 Capsid protein Proteins 0.000 description 2
- 108010077544 Chromatin Proteins 0.000 description 2
- 101710094648 Coat protein Proteins 0.000 description 2
- 241000186216 Corynebacterium Species 0.000 description 2
- 102220605961 Cytosolic arginine sensor for mTORC1 subunit 2_D11A_mutation Human genes 0.000 description 2
- 102220605872 Cytosolic arginine sensor for mTORC1 subunit 2_D16A_mutation Human genes 0.000 description 2
- 230000008836 DNA modification Effects 0.000 description 2
- 108010093204 DNA polymerase theta Proteins 0.000 description 2
- 230000006820 DNA synthesis Effects 0.000 description 2
- 241000702421 Dependoparvovirus Species 0.000 description 2
- 101000617550 Dictyostelium discoideum Presenilin-A Proteins 0.000 description 2
- 101100162704 Emericella nidulans I-AniI gene Proteins 0.000 description 2
- 241000713730 Equine infectious anemia virus Species 0.000 description 2
- 241000588724 Escherichia coli Species 0.000 description 2
- 241001524679 Escherichia virus M13 Species 0.000 description 2
- 101150106478 GPS1 gene Proteins 0.000 description 2
- 102100021181 Golgi phosphoprotein 3 Human genes 0.000 description 2
- 108091064358 Holliday junction Proteins 0.000 description 2
- 102000039011 Holliday junction Human genes 0.000 description 2
- 101001105683 Homo sapiens Pre-mRNA-processing-splicing factor 8 Proteins 0.000 description 2
- 241000713673 Human foamy virus Species 0.000 description 2
- 229930010555 Inosine Natural products 0.000 description 2
- UGQMRVRMYYASKQ-KQYNXXCUSA-N Inosine Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C2=NC=NC(O)=C2N=C1 UGQMRVRMYYASKQ-KQYNXXCUSA-N 0.000 description 2
- 108091007767 MALAT1 Proteins 0.000 description 2
- FYYHWMGAXLPEAU-UHFFFAOYSA-N Magnesium Chemical compound [Mg] FYYHWMGAXLPEAU-UHFFFAOYSA-N 0.000 description 2
- 101710125418 Major capsid protein Proteins 0.000 description 2
- 241000713821 Mason-Pfizer monkey virus Species 0.000 description 2
- 101100219625 Mus musculus Casd1 gene Proteins 0.000 description 2
- 241000588650 Neisseria meningitidis Species 0.000 description 2
- 101710141454 Nucleoprotein Proteins 0.000 description 2
- 229910019142 PO4 Inorganic materials 0.000 description 2
- 241000881705 Porcine endogenous retrovirus Species 0.000 description 2
- 102100021231 Pre-mRNA-processing-splicing factor 8 Human genes 0.000 description 2
- 101710083689 Probable capsid protein Proteins 0.000 description 2
- 102000018120 Recombinases Human genes 0.000 description 2
- 108010091086 Recombinases Proteins 0.000 description 2
- 240000004808 Saccharomyces cerevisiae Species 0.000 description 2
- 238000012300 Sequence Analysis Methods 0.000 description 2
- 241000713656 Simian foamy virus Species 0.000 description 2
- 241000713311 Simian immunodeficiency virus Species 0.000 description 2
- 108020004682 Single-Stranded DNA Proteins 0.000 description 2
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 2
- 102100029452 T cell receptor alpha chain constant Human genes 0.000 description 2
- 108700019146 Transgenes Proteins 0.000 description 2
- ISAKRJDGNUQOIC-UHFFFAOYSA-N Uracil Chemical compound O=C1C=CNC(=O)N1 ISAKRJDGNUQOIC-UHFFFAOYSA-N 0.000 description 2
- 108700005077 Viral Genes Proteins 0.000 description 2
- 108010017070 Zinc Finger Nucleases Proteins 0.000 description 2
- DZBUGLKDJFMEHC-UHFFFAOYSA-N acridine Chemical compound C1=CC=CC2=CC3=CC=CC=C3N=C21 DZBUGLKDJFMEHC-UHFFFAOYSA-N 0.000 description 2
- AVKUERGKIZMTKX-NJBDSQKTSA-N ampicillin Chemical compound C1([C@@H](N)C(=O)N[C@H]2[C@H]3SC([C@@H](N3C2=O)C(O)=O)(C)C)=CC=CC=C1 AVKUERGKIZMTKX-NJBDSQKTSA-N 0.000 description 2
- 229960000723 ampicillin Drugs 0.000 description 2
- 238000004458 analytical method Methods 0.000 description 2
- 210000004102 animal cell Anatomy 0.000 description 2
- 239000003242 anti bacterial agent Substances 0.000 description 2
- 230000001580 bacterial effect Effects 0.000 description 2
- 238000002869 basic local alignment search tool Methods 0.000 description 2
- 230000008901 benefit Effects 0.000 description 2
- 101150055766 cat gene Proteins 0.000 description 2
- 230000030570 cellular localization Effects 0.000 description 2
- 238000006243 chemical reaction Methods 0.000 description 2
- 238000012710 chemistry, manufacturing and control Methods 0.000 description 2
- 210000003483 chromatin Anatomy 0.000 description 2
- 238000004891 communication Methods 0.000 description 2
- 230000002596 correlated effect Effects 0.000 description 2
- ZPTBLXKRQACLCR-XVFCMESISA-N dihydrouridine Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)CC1 ZPTBLXKRQACLCR-XVFCMESISA-N 0.000 description 2
- 230000003828 downregulation Effects 0.000 description 2
- 239000003814 drug Substances 0.000 description 2
- 238000009510 drug design Methods 0.000 description 2
- 229940124642 endogenous agent Drugs 0.000 description 2
- 230000001973 epigenetic effect Effects 0.000 description 2
- 239000013613 expression plasmid Substances 0.000 description 2
- 238000001943 fluorescence-activated cell sorting Methods 0.000 description 2
- 230000002538 fungal effect Effects 0.000 description 2
- 239000000833 heterodimer Substances 0.000 description 2
- 239000000710 homodimer Substances 0.000 description 2
- 230000005764 inhibitory process Effects 0.000 description 2
- 230000000977 initiatory effect Effects 0.000 description 2
- 229960003786 inosine Drugs 0.000 description 2
- 229930027917 kanamycin Natural products 0.000 description 2
- 229960000318 kanamycin Drugs 0.000 description 2
- SBUJHOSQTJFQJX-NOAMYHISSA-N kanamycin Chemical compound O[C@@H]1[C@@H](O)[C@H](O)[C@@H](CN)O[C@@H]1O[C@H]1[C@H](O)[C@@H](O[C@@H]2[C@@H]([C@@H](N)[C@H](O)[C@@H](CO)O2)O)[C@H](N)C[C@@H]1N SBUJHOSQTJFQJX-NOAMYHISSA-N 0.000 description 2
- 229930182823 kanamycin A Natural products 0.000 description 2
- 229910052749 magnesium Inorganic materials 0.000 description 2
- 239000011777 magnesium Substances 0.000 description 2
- 238000012423 maintenance Methods 0.000 description 2
- 239000000463 material Substances 0.000 description 2
- 210000003470 mitochondria Anatomy 0.000 description 2
- 239000003607 modifier Substances 0.000 description 2
- 238000010369 molecular cloning Methods 0.000 description 2
- 238000012544 monitoring process Methods 0.000 description 2
- 108091027963 non-coding RNA Proteins 0.000 description 2
- 102000042567 non-coding RNA Human genes 0.000 description 2
- 230000036961 partial effect Effects 0.000 description 2
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 2
- 239000010452 phosphate Substances 0.000 description 2
- 230000000379 polymerizing effect Effects 0.000 description 2
- 238000002360 preparation method Methods 0.000 description 2
- 230000001915 proofreading effect Effects 0.000 description 2
- 230000016434 protein splicing Effects 0.000 description 2
- ZCCUUQDIBDJBTK-UHFFFAOYSA-N psoralen Chemical compound C1=C2OC(=O)C=CC2=CC2=C1OC=C2 ZCCUUQDIBDJBTK-UHFFFAOYSA-N 0.000 description 2
- 230000002829 reductive effect Effects 0.000 description 2
- 230000010076 replication Effects 0.000 description 2
- 238000011160 research Methods 0.000 description 2
- 125000000548 ribosyl group Chemical group C1([C@H](O)[C@H](O)[C@H](O1)CO)* 0.000 description 2
- DWRXFEITVBNRMK-JXOAFFINSA-N ribothymidine Chemical compound O=C1NC(=O)C(C)=CN1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 DWRXFEITVBNRMK-JXOAFFINSA-N 0.000 description 2
- 102220289632 rs33941849 Human genes 0.000 description 2
- 230000009870 specific binding Effects 0.000 description 2
- 230000006641 stabilisation Effects 0.000 description 2
- 238000011105 stabilization Methods 0.000 description 2
- 230000004960 subcellular localization Effects 0.000 description 2
- 238000003239 susceptibility assay Methods 0.000 description 2
- 238000001089 thermophoresis Methods 0.000 description 2
- 230000001960 triggered effect Effects 0.000 description 2
- 230000003827 upregulation Effects 0.000 description 2
- 239000003981 vehicle Substances 0.000 description 2
- 230000017613 viral reproduction Effects 0.000 description 2
- KYEKLQMDNZPEFU-KVTDHHQDSA-N 1-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-1,3,5-triazine-2,4-dione Chemical compound O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)N=C1 KYEKLQMDNZPEFU-KVTDHHQDSA-N 0.000 description 1
- RVWUFECBVNXJEN-YGOYTEALSA-N 1-[(2s,4s,5r)-4-hydroxy-5-(hydroxymethyl)-2-prop-1-ynyloxolan-2-yl]pyrimidine-2,4-dione Chemical compound C1=CC(=O)NC(=O)N1[C@@]1(C#CC)C[C@H](O)[C@@H](CO)O1 RVWUFECBVNXJEN-YGOYTEALSA-N 0.000 description 1
- UVBYMVOUBXYSFV-XUTVFYLZSA-N 1-methylpseudouridine Chemical compound O=C1NC(=O)N(C)C=C1[C@H]1[C@H](O)[C@H](O)[C@@H](CO)O1 UVBYMVOUBXYSFV-XUTVFYLZSA-N 0.000 description 1
- YHRRPHCORALGKQ-FDDDBJFASA-N 2'-O-methyl-5-methyluridine Chemical compound CO[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)C(C)=C1 YHRRPHCORALGKQ-FDDDBJFASA-N 0.000 description 1
- VXGRJERITKFWPL-UHFFFAOYSA-N 4',5'-Dihydropsoralen Natural products C1=C2OC(=O)C=CC2=CC2=C1OCC2 VXGRJERITKFWPL-UHFFFAOYSA-N 0.000 description 1
- LMMLLWZHCKCFQA-UGKPPGOTSA-N 4-amino-1-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)-2-prop-1-ynyloxolan-2-yl]pyrimidin-2-one Chemical compound C1=CC(N)=NC(=O)N1[C@]1(C#CC)O[C@H](CO)[C@@H](O)[C@H]1O LMMLLWZHCKCFQA-UGKPPGOTSA-N 0.000 description 1
- MSHADEGKNJRMIU-YGOYTEALSA-N 4-amino-1-[(2s,4s,5r)-4-hydroxy-5-(hydroxymethyl)-2-prop-1-ynyloxolan-2-yl]pyrimidin-2-one Chemical compound C1=CC(N)=NC(=O)N1[C@@]1(C#CC)C[C@H](O)[C@@H](CO)O1 MSHADEGKNJRMIU-YGOYTEALSA-N 0.000 description 1
- LUCHPKXVUGJYGU-XLPZGREQSA-N 5-methyl-2'-deoxycytidine Chemical compound O=C1N=C(N)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 LUCHPKXVUGJYGU-XLPZGREQSA-N 0.000 description 1
- HCPQEJWMXCYZTE-UHFFFAOYSA-N 8-methoxy-7h-purine-2,6-diamine Chemical compound NC1=NC(N)=C2NC(OC)=NC2=N1 HCPQEJWMXCYZTE-UHFFFAOYSA-N 0.000 description 1
- ABXGJJVKZAAEDH-IOSLPCCCSA-N 9-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-(dimethylamino)-3h-purine-6-thione Chemical compound C1=NC=2C(=S)NC(N(C)C)=NC=2N1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O ABXGJJVKZAAEDH-IOSLPCCCSA-N 0.000 description 1
- ADPMAYFIIFNDMT-KQYNXXCUSA-N 9-[(2r,3r,4s,5r)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]-2-(methylamino)-3h-purine-6-thione Chemical compound C1=NC=2C(=S)NC(NC)=NC=2N1[C@@H]1O[C@H](CO)[C@@H](O)[C@H]1O ADPMAYFIIFNDMT-KQYNXXCUSA-N 0.000 description 1
- 208000035657 Abasia Diseases 0.000 description 1
- 241000604451 Acidaminococcus Species 0.000 description 1
- 241000093740 Acidaminococcus sp. Species 0.000 description 1
- 101000860090 Acidaminococcus sp. (strain BV3L6) CRISPR-associated endonuclease Cas12a Proteins 0.000 description 1
- 241001588186 Acidaminococcus sp. BV3L6 Species 0.000 description 1
- 102100027211 Albumin Human genes 0.000 description 1
- 108010088751 Albumins Proteins 0.000 description 1
- 108091023043 Alu Element Proteins 0.000 description 1
- 241000180579 Arca Species 0.000 description 1
- 239000004475 Arginine Substances 0.000 description 1
- 241000271566 Aves Species 0.000 description 1
- 208000034309 Bacterial disease carrier Diseases 0.000 description 1
- 108091032955 Bacterial small RNA Proteins 0.000 description 1
- 241000616876 Belliella baltica Species 0.000 description 1
- QCMYYKRYFNMIEC-UHFFFAOYSA-N COP(O)=O Chemical class COP(O)=O QCMYYKRYFNMIEC-UHFFFAOYSA-N 0.000 description 1
- 108091079001 CRISPR RNA Proteins 0.000 description 1
- 101150018129 CSF2 gene Proteins 0.000 description 1
- 101150069031 CSN2 gene Proteins 0.000 description 1
- 241000589875 Campylobacter jejuni Species 0.000 description 1
- 241000283707 Capra Species 0.000 description 1
- 102000014914 Carrier Proteins Human genes 0.000 description 1
- 108091033380 Coding strand Proteins 0.000 description 1
- 108020004635 Complementary DNA Proteins 0.000 description 1
- 241000918600 Corynebacterium ulcerans Species 0.000 description 1
- 241001337994 Cryptococcus <scale insect> Species 0.000 description 1
- 101150074775 Csf1 gene Proteins 0.000 description 1
- 241000192700 Cyanobacteria Species 0.000 description 1
- 241000701022 Cytomegalovirus Species 0.000 description 1
- 102220605836 Cytosolic arginine sensor for mTORC1 subunit 2_E1369R_mutation Human genes 0.000 description 1
- 102220605919 Cytosolic arginine sensor for mTORC1 subunit 2_E1449H_mutation Human genes 0.000 description 1
- 102220605899 Cytosolic arginine sensor for mTORC1 subunit 2_R1556A_mutation Human genes 0.000 description 1
- 102000007528 DNA Polymerase III Human genes 0.000 description 1
- 108010071146 DNA Polymerase III Proteins 0.000 description 1
- 102220507490 E3 ubiquitin-protein ligase pellino homolog 1_Q42A_mutation Human genes 0.000 description 1
- 241000283073 Equus caballus Species 0.000 description 1
- 101100126180 Escherichia coli (strain K12) intS gene Proteins 0.000 description 1
- 241000186394 Eubacterium Species 0.000 description 1
- 241000724791 Filamentous phage Species 0.000 description 1
- 241000192125 Firmicutes Species 0.000 description 1
- 241000589601 Francisella Species 0.000 description 1
- 241000589599 Francisella tularensis subsp. novicida Species 0.000 description 1
- 241000287828 Gallus gallus Species 0.000 description 1
- 108700028146 Genetic Enhancer Elements Proteins 0.000 description 1
- 235000010469 Glycine max Nutrition 0.000 description 1
- 108050008753 HNH endonucleases Proteins 0.000 description 1
- 102000000310 HNH endonucleases Human genes 0.000 description 1
- 108060003760 HNH nuclease Proteins 0.000 description 1
- 102000029812 HNH nuclease Human genes 0.000 description 1
- 241000606790 Haemophilus Species 0.000 description 1
- 108090001102 Hammerhead ribozyme Proteins 0.000 description 1
- 241000700721 Hepatitis B virus Species 0.000 description 1
- 102100028909 Heterogeneous nuclear ribonucleoprotein K Human genes 0.000 description 1
- 241000238631 Hexapoda Species 0.000 description 1
- MAJYPBAJPNUFPV-BQBZGAKWSA-N His-Cys Chemical compound SC[C@@H](C(O)=O)NC(=O)[C@@H](N)CC1=CN=CN1 MAJYPBAJPNUFPV-BQBZGAKWSA-N 0.000 description 1
- 102100038970 Histone-lysine N-methyltransferase EZH2 Human genes 0.000 description 1
- 101000946926 Homo sapiens C-C chemokine receptor type 5 Proteins 0.000 description 1
- 101000926140 Homo sapiens Gem-associated protein 2 Proteins 0.000 description 1
- 101000838964 Homo sapiens Heterogeneous nuclear ribonucleoprotein K Proteins 0.000 description 1
- 101000882127 Homo sapiens Histone-lysine N-methyltransferase EZH2 Proteins 0.000 description 1
- 101000980562 Homo sapiens Microspherule protein 1 Proteins 0.000 description 1
- 101000716750 Homo sapiens Protein SCAF11 Proteins 0.000 description 1
- 101000600434 Homo sapiens Putative uncharacterized protein encoded by MIR7-3HG Proteins 0.000 description 1
- 101000634853 Homo sapiens T cell receptor alpha chain constant Proteins 0.000 description 1
- 101000723833 Homo sapiens Zinc finger E-box-binding homeobox 2 Proteins 0.000 description 1
- 108091029795 Intergenic region Proteins 0.000 description 1
- ODKSFYDXXFIFQN-BYPYZUCNSA-P L-argininium(2+) Chemical compound NC(=[NH2+])NCCC[C@H]([NH3+])C(O)=O ODKSFYDXXFIFQN-BYPYZUCNSA-P 0.000 description 1
- 241001112693 Lachnospiraceae Species 0.000 description 1
- 239000012097 Lipofectamine 2000 Substances 0.000 description 1
- 241000186805 Listeria innocua Species 0.000 description 1
- 108020005198 Long Noncoding RNA Proteins 0.000 description 1
- 102100024160 Microspherule protein 1 Human genes 0.000 description 1
- 241000713333 Mouse mammary tumor virus Species 0.000 description 1
- 241000699666 Mus <mouse, genus> Species 0.000 description 1
- 241000699670 Mus sp. Species 0.000 description 1
- 102000016538 Myb domains Human genes 0.000 description 1
- 108050006056 Myb domains Proteins 0.000 description 1
- BAWFJGJZGIEFAR-NNYOXOHSSA-O NAD(+) Chemical compound NC(=O)C1=CC=C[N+]([C@H]2[C@@H]([C@H](O)[C@@H](COP(O)(=O)OP(O)(=O)OC[C@@H]3[C@H]([C@@H](O)[C@@H](O3)N3C4=NC=NC(N)=C4N=C3)O)O2)O)=C1 BAWFJGJZGIEFAR-NNYOXOHSSA-O 0.000 description 1
- 108010057466 NF-kappa B Proteins 0.000 description 1
- 102000003945 NF-kappa B Human genes 0.000 description 1
- 238000005481 NMR spectroscopy Methods 0.000 description 1
- 241000588653 Neisseria Species 0.000 description 1
- 206010028980 Neoplasm Diseases 0.000 description 1
- 101100385413 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) csm-3 gene Proteins 0.000 description 1
- 102000002488 Nucleoplasmin Human genes 0.000 description 1
- 240000007594 Oryza sativa Species 0.000 description 1
- 235000007164 Oryza sativa Nutrition 0.000 description 1
- 108091081548 Palindromic sequence Proteins 0.000 description 1
- 241000606860 Pasteurella Species 0.000 description 1
- 241001494479 Pecora Species 0.000 description 1
- 108091000080 Phosphotransferase Proteins 0.000 description 1
- 241000605861 Prevotella Species 0.000 description 1
- 241001135221 Prevotella intermedia Species 0.000 description 1
- 101150044917 Prl3b1 gene Proteins 0.000 description 1
- 101150113550 Prl3d1 gene Proteins 0.000 description 1
- 241000577544 Psychroflexus torquis Species 0.000 description 1
- 102100037401 Putative uncharacterized protein encoded by MIR7-3HG Human genes 0.000 description 1
- 101710123256 Pyrrolysine-tRNA ligase Proteins 0.000 description 1
- 102000017143 RNA Polymerase I Human genes 0.000 description 1
- 108010013845 RNA Polymerase I Proteins 0.000 description 1
- 102000009572 RNA Polymerase II Human genes 0.000 description 1
- 108010009460 RNA Polymerase II Proteins 0.000 description 1
- 102000014450 RNA Polymerase III Human genes 0.000 description 1
- 108010078067 RNA Polymerase III Proteins 0.000 description 1
- 108091008103 RNA aptamers Proteins 0.000 description 1
- 230000014632 RNA localization Effects 0.000 description 1
- 230000026279 RNA modification Effects 0.000 description 1
- 101100047461 Rattus norvegicus Trpm8 gene Proteins 0.000 description 1
- 102000001218 Rec A Recombinases Human genes 0.000 description 1
- 108010055016 Rec A Recombinases Proteins 0.000 description 1
- 108020004511 Recombinant DNA Proteins 0.000 description 1
- 108020005091 Replication Origin Proteins 0.000 description 1
- 108700008625 Reporter Genes Proteins 0.000 description 1
- 101500028719 Rhodothermus marinus Homing endonuclease PI-Rma43812IP Proteins 0.000 description 1
- 102000003661 Ribonuclease III Human genes 0.000 description 1
- 108010057163 Ribonuclease III Proteins 0.000 description 1
- 108010083644 Ribonucleases Proteins 0.000 description 1
- 102000006382 Ribonucleases Human genes 0.000 description 1
- PYMYPHUHKUWMLA-LMVFSUKVSA-N Ribose Natural products OC[C@@H](O)[C@@H](O)[C@@H](O)C=O PYMYPHUHKUWMLA-LMVFSUKVSA-N 0.000 description 1
- 108020001027 Ribosomal DNA Proteins 0.000 description 1
- 108020005543 Satellite RNA Proteins 0.000 description 1
- 108020004688 Small Nuclear RNA Proteins 0.000 description 1
- 102000039471 Small Nuclear RNA Human genes 0.000 description 1
- 241001606419 Spiroplasma syrphidicola Species 0.000 description 1
- 241000203029 Spiroplasma taiwanense Species 0.000 description 1
- 101800003630 Ssp GyrB intein Proteins 0.000 description 1
- 241000191940 Staphylococcus Species 0.000 description 1
- 241000191967 Staphylococcus aureus Species 0.000 description 1
- 108091081024 Start codon Proteins 0.000 description 1
- 241000194017 Streptococcus Species 0.000 description 1
- 241000194056 Streptococcus iniae Species 0.000 description 1
- 101100443856 Streptococcus pyogenes serotype M18 (strain MGAS8232) polC gene Proteins 0.000 description 1
- 108091027544 Subgenomic mRNA Proteins 0.000 description 1
- 241000205101 Sulfolobus Species 0.000 description 1
- 241000282898 Sus scrofa Species 0.000 description 1
- 108091008874 T cell receptors Proteins 0.000 description 1
- 102000016266 T-Cell Antigen Receptors Human genes 0.000 description 1
- 208000000389 T-cell leukemia Diseases 0.000 description 1
- 208000028530 T-cell lymphoblastic leukemia/lymphoma Diseases 0.000 description 1
- RYYWUUFWQRZTIU-UHFFFAOYSA-N Thiophosphoric acid Chemical class OP(O)(S)=O RYYWUUFWQRZTIU-UHFFFAOYSA-N 0.000 description 1
- IQFYYKKMVGJFEH-XLPZGREQSA-N Thymidine Chemical compound O=C1NC(=O)C(C)=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 IQFYYKKMVGJFEH-XLPZGREQSA-N 0.000 description 1
- 241000723677 Tobacco ringspot virus Species 0.000 description 1
- 108020004566 Transfer RNA Proteins 0.000 description 1
- 235000021307 Triticum Nutrition 0.000 description 1
- 244000098338 Triticum aestivum Species 0.000 description 1
- 101150114976 US21 gene Proteins 0.000 description 1
- 102000039634 Untranslated RNA Human genes 0.000 description 1
- 108020004417 Untranslated RNA Proteins 0.000 description 1
- DRTQHJPVMGBUCF-XVFCMESISA-N Uridine Natural products O[C@@H]1[C@H](O)[C@@H](CO)O[C@H]1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-XVFCMESISA-N 0.000 description 1
- 108091093126 WHP Posttrascriptional Response Element Proteins 0.000 description 1
- 241001492404 Woodchuck hepatitis virus Species 0.000 description 1
- 241000757094 Xanthomonas campestris pv. raphani 756C Species 0.000 description 1
- 241000589652 Xanthomonas oryzae Species 0.000 description 1
- 241000504809 Xanthomonas oryzae pv. oryzicola BLS256 Species 0.000 description 1
- 240000008042 Zea mays Species 0.000 description 1
- 235000005824 Zea mays ssp. parviglumis Nutrition 0.000 description 1
- 235000002017 Zea mays subsp mays Nutrition 0.000 description 1
- 102100028458 Zinc finger E-box-binding homeobox 2 Human genes 0.000 description 1
- KHYOUGAATNYCAZ-XVFCMESISA-N [[(2r,3s,4r,5r)-3,4-dihydroxy-5-(4-oxo-2-sulfanylidenepyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl] phosphono hydrogen phosphate Chemical compound O1[C@H](COP(O)(=O)OP(O)(=O)OP(O)(O)=O)[C@@H](O)[C@@H](O)[C@@H]1N1C(=S)NC(=O)C=C1 KHYOUGAATNYCAZ-XVFCMESISA-N 0.000 description 1
- 238000009825 accumulation Methods 0.000 description 1
- 239000002253 acid Substances 0.000 description 1
- 150000007513 acids Chemical class 0.000 description 1
- 239000012190 activator Substances 0.000 description 1
- 230000003044 adaptive effect Effects 0.000 description 1
- 150000001299 aldehydes Chemical class 0.000 description 1
- 239000002168 alkylating agent Substances 0.000 description 1
- HMFHBZSHGGEWLO-UHFFFAOYSA-N alpha-D-Furanose-Ribose Natural products OCC1OC(O)C(O)C1O HMFHBZSHGGEWLO-UHFFFAOYSA-N 0.000 description 1
- 125000000539 amino acid group Chemical group 0.000 description 1
- 230000000692 anti-sense effect Effects 0.000 description 1
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 description 1
- 238000003491 array Methods 0.000 description 1
- 208000005266 avian sarcoma Diseases 0.000 description 1
- 244000052616 bacterial pathogen Species 0.000 description 1
- 239000003782 beta lactam antibiotic agent Substances 0.000 description 1
- DRTQHJPVMGBUCF-PSQAKQOGSA-N beta-L-uridine Natural products O[C@H]1[C@@H](O)[C@H](CO)O[C@@H]1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-PSQAKQOGSA-N 0.000 description 1
- 230000002457 bidirectional effect Effects 0.000 description 1
- 239000011230 binding agent Substances 0.000 description 1
- 108091008324 binding proteins Proteins 0.000 description 1
- 238000010364 biochemical engineering Methods 0.000 description 1
- 229960000074 biopharmaceutical Drugs 0.000 description 1
- 210000004900 c-terminal fragment Anatomy 0.000 description 1
- 238000010804 cDNA synthesis Methods 0.000 description 1
- 201000011510 cancer Diseases 0.000 description 1
- 150000004657 carbamic acid derivatives Chemical class 0.000 description 1
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 description 1
- 239000000969 carrier Substances 0.000 description 1
- 230000015556 catabolic process Effects 0.000 description 1
- 210000003855 cell nucleus Anatomy 0.000 description 1
- 108091092328 cellular RNA Proteins 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- 239000002738 chelating agent Substances 0.000 description 1
- 238000010367 cloning Methods 0.000 description 1
- 230000001332 colony forming effect Effects 0.000 description 1
- 230000021615 conjugation Effects 0.000 description 1
- 238000010276 construction Methods 0.000 description 1
- 101150055601 cops2 gene Proteins 0.000 description 1
- 235000005822 corn Nutrition 0.000 description 1
- 210000003618 cortical neuron Anatomy 0.000 description 1
- 239000013078 crystal Substances 0.000 description 1
- 101150037603 cst-1 gene Proteins 0.000 description 1
- 238000005520 cutting process Methods 0.000 description 1
- 230000007123 defense Effects 0.000 description 1
- 230000002950 deficient Effects 0.000 description 1
- 238000006731 degradation reaction Methods 0.000 description 1
- AAXYAFFKOSNMEB-MHARETSRSA-N diguanosine triphosphate Chemical compound C1=NC(C(N=C(N)N2)=O)=C2N1[C@@H]([C@H](O)[C@@H]1O)O[C@@H]1COP(O)(=O)OP(O)(=O)OP(O)(=O)OC[C@H]([C@@H](O)[C@H]1O)O[C@H]1N1C=NC2=C1NC(N)=NC2=O AAXYAFFKOSNMEB-MHARETSRSA-N 0.000 description 1
- 206010013023 diphtheria Diseases 0.000 description 1
- 208000035475 disorder Diseases 0.000 description 1
- NAGJZTKCGNOGPW-UHFFFAOYSA-N dithiophosphoric acid Chemical class OP(O)(S)=S NAGJZTKCGNOGPW-UHFFFAOYSA-N 0.000 description 1
- 101150008507 dnaE gene Proteins 0.000 description 1
- 101150035285 dnaE1 gene Proteins 0.000 description 1
- 101150003155 dnaG gene Proteins 0.000 description 1
- 230000012361 double-strand break repair Effects 0.000 description 1
- 230000009977 dual effect Effects 0.000 description 1
- 238000001493 electron microscopy Methods 0.000 description 1
- 238000012407 engineering method Methods 0.000 description 1
- 230000007613 environmental effect Effects 0.000 description 1
- 230000002255 enzymatic effect Effects 0.000 description 1
- 230000004049 epigenetic modification Effects 0.000 description 1
- 230000006718 epigenetic regulation Effects 0.000 description 1
- 230000007717 exclusion Effects 0.000 description 1
- 210000001723 extracellular space Anatomy 0.000 description 1
- 238000002866 fluorescence resonance energy transfer Methods 0.000 description 1
- 238000009472 formulation Methods 0.000 description 1
- 125000002485 formyl group Chemical group [H]C(*)=O 0.000 description 1
- 230000037433 frameshift Effects 0.000 description 1
- 238000003197 gene knockdown Methods 0.000 description 1
- 238000001415 gene therapy Methods 0.000 description 1
- 102000054766 genetic haplotypes Human genes 0.000 description 1
- PCHJSUWPFVWCPO-UHFFFAOYSA-N gold Chemical compound [Au] PCHJSUWPFVWCPO-UHFFFAOYSA-N 0.000 description 1
- 239000010931 gold Substances 0.000 description 1
- 229910052737 gold Inorganic materials 0.000 description 1
- 230000012010 growth Effects 0.000 description 1
- 238000002744 homologous recombination Methods 0.000 description 1
- 230000006801 homologous recombination Effects 0.000 description 1
- 229910052739 hydrogen Inorganic materials 0.000 description 1
- 239000001257 hydrogen Substances 0.000 description 1
- 230000001771 impaired effect Effects 0.000 description 1
- 238000011065 in-situ storage Methods 0.000 description 1
- 230000000415 inactivating effect Effects 0.000 description 1
- 239000003112 inhibitor Substances 0.000 description 1
- 239000012212 insulator Substances 0.000 description 1
- 230000002452 interceptive effect Effects 0.000 description 1
- 238000002955 isolation Methods 0.000 description 1
- 208000032839 leukemia Diseases 0.000 description 1
- 125000003588 lysine group Chemical group [H]N([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])(N([H])[H])C(*)=O 0.000 description 1
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 1
- 230000011987 methylation Effects 0.000 description 1
- 238000007069 methylation reaction Methods 0.000 description 1
- 230000003278 mimic effect Effects 0.000 description 1
- 239000007758 minimum essential medium Substances 0.000 description 1
- 238000002703 mutagenesis Methods 0.000 description 1
- 231100000350 mutagenesis Toxicity 0.000 description 1
- 239000003471 mutagenic agent Substances 0.000 description 1
- 231100000707 mutagenic chemical Toxicity 0.000 description 1
- 230000003505 mutagenic effect Effects 0.000 description 1
- 210000004898 n-terminal fragment Anatomy 0.000 description 1
- 230000032965 negative regulation of cell volume Effects 0.000 description 1
- 238000007481 next generation sequencing Methods 0.000 description 1
- 230000030147 nuclear export Effects 0.000 description 1
- 108060005597 nucleoplasmin Proteins 0.000 description 1
- 239000002777 nucleoside Substances 0.000 description 1
- 150000003833 nucleoside derivatives Chemical class 0.000 description 1
- 230000002018 overexpression Effects 0.000 description 1
- 230000003647 oxidation Effects 0.000 description 1
- 238000007254 oxidation reaction Methods 0.000 description 1
- 238000004806 packaging method and process Methods 0.000 description 1
- 238000002823 phage display Methods 0.000 description 1
- 125000002467 phosphate group Chemical group [H]OP(=O)(O[H])O[*] 0.000 description 1
- 150000008298 phosphoramidates Chemical class 0.000 description 1
- 102000020233 phosphotransferase Human genes 0.000 description 1
- 244000000003 plant pathogen Species 0.000 description 1
- 230000027086 plasmid maintenance Effects 0.000 description 1
- 230000029279 positive regulation of transcription, DNA-dependent Effects 0.000 description 1
- 230000001124 posttranscriptional effect Effects 0.000 description 1
- 239000002243 precursor Substances 0.000 description 1
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 description 1
- 108020001580 protein domains Proteins 0.000 description 1
- 230000012846 protein folding Effects 0.000 description 1
- 230000026447 protein localization Effects 0.000 description 1
- 238000001742 protein purification Methods 0.000 description 1
- 238000000746 purification Methods 0.000 description 1
- 150000003230 pyrimidines Chemical class 0.000 description 1
- 238000003908 quality control method Methods 0.000 description 1
- 238000010188 recombinant method Methods 0.000 description 1
- 230000007115 recruitment Effects 0.000 description 1
- 108020004418 ribosomal RNA Proteins 0.000 description 1
- 235000009566 rice Nutrition 0.000 description 1
- 102200070544 rs202198133 Human genes 0.000 description 1
- 230000028327 secretion Effects 0.000 description 1
- 238000010187 selection method Methods 0.000 description 1
- 230000037432 silent mutation Effects 0.000 description 1
- 230000005783 single-strand break Effects 0.000 description 1
- 239000011780 sodium chloride Substances 0.000 description 1
- 239000001509 sodium citrate Substances 0.000 description 1
- NLJMYIDDQXHKNR-UHFFFAOYSA-K sodium citrate Chemical compound O.O.[Na+].[Na+].[Na+].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O NLJMYIDDQXHKNR-UHFFFAOYSA-K 0.000 description 1
- 230000000087 stabilizing effect Effects 0.000 description 1
- 238000005309 stochastic process Methods 0.000 description 1
- 230000004083 survival effect Effects 0.000 description 1
- 230000002123 temporal effect Effects 0.000 description 1
- 238000012360 testing method Methods 0.000 description 1
- 230000009466 transformation Effects 0.000 description 1
- UNXRWKVEANCORM-UHFFFAOYSA-N triphosphoric acid Chemical compound OP(O)(=O)OP(O)(=O)OP(O)(O)=O UNXRWKVEANCORM-UHFFFAOYSA-N 0.000 description 1
- 230000007306 turnover Effects 0.000 description 1
- 238000010396 two-hybrid screening Methods 0.000 description 1
- 229940035893 uracil Drugs 0.000 description 1
- DRTQHJPVMGBUCF-UHFFFAOYSA-N uracil arabinoside Natural products OC1C(O)C(CO)OC1N1C(=O)NC(=O)C=C1 DRTQHJPVMGBUCF-UHFFFAOYSA-N 0.000 description 1
- 229950010342 uridine triphosphate Drugs 0.000 description 1
- 108700026220 vif Genes Proteins 0.000 description 1
- 230000029812 viral genome replication Effects 0.000 description 1
- 238000002424 x-ray crystallography Methods 0.000 description 1
- 239000002132 β-lactam antibiotic Substances 0.000 description 1
- 229940124586 β-lactam antibiotics Drugs 0.000 description 1
Classifications
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K48/00—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
- A61K48/005—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy characterised by an aspect of the 'active' part of the composition delivered, i.e. the nucleic acid delivered
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/102—Mutagenizing nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/111—General methods applicable to biologically active non-coding nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/87—Introduction of foreign genetic material using processes not otherwise provided for, e.g. co-transformation
- C12N15/90—Stable introduction of foreign DNA into chromosome
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
- C12N9/1252—DNA-directed DNA polymerase (2.7.7.7), i.e. DNA replicase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/10—Transferases (2.)
- C12N9/12—Transferases (2.) transferring phosphorus containing groups, e.g. kinases (2.7)
- C12N9/1241—Nucleotidyltransferases (2.7.7)
- C12N9/1264—DNA nucleotidylexotransferase (2.7.7.31), i.e. terminal nucleotidyl transferase
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases [RNase]; Deoxyribonucleases [DNase]
- C12N9/222—Clustered regularly interspaced short palindromic repeats [CRISPR]-associated [CAS] enzymes
- C12N9/226—Class 2 CAS enzyme complex, e.g. single CAS protein
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2319/00—Fusion polypeptide
- C07K2319/01—Fusion polypeptide containing a localisation/targetting motif
- C07K2319/09—Fusion polypeptide containing a localisation/targetting motif containing a nuclear localisation signal
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2319/00—Fusion polypeptide
- C07K2319/80—Fusion polypeptide containing a DNA binding domain, e.g. Lacl or Tet-repressor
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
- C12N2310/20—Type of nucleic acid involving clustered regularly interspaced short palindromic repeats [CRISPR]
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2740/00—Reverse transcribing RNA viruses
- C12N2740/00011—Details
- C12N2740/10011—Retroviridae
- C12N2740/16011—Human Immunodeficiency Virus, HIV
- C12N2740/16041—Use of virus, viral particle or viral elements as a vector
- C12N2740/16043—Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
Landscapes
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Genetics & Genomics (AREA)
- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Wood Science & Technology (AREA)
- Organic Chemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Zoology (AREA)
- Molecular Biology (AREA)
- Biomedical Technology (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Microbiology (AREA)
- Biochemistry (AREA)
- Medicinal Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Plant Pathology (AREA)
- Mycology (AREA)
- Animal Behavior & Ethology (AREA)
- Epidemiology (AREA)
- Public Health (AREA)
- Veterinary Medicine (AREA)
- Crystallography & Structural Chemistry (AREA)
- Pharmacology & Pharmacy (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Cosmetics (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- Toys (AREA)
- Peptides Or Proteins (AREA)
- Agricultural Chemicals And Associated Chemicals (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US202163241931P | 2021-09-08 | 2021-09-08 | |
| US63/241,931 | 2021-09-08 | ||
| PCT/US2022/076024 WO2023039407A2 (en) | 2021-09-08 | 2022-09-07 | Methods and compositions for modulating a genome |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AU2022344243A1 true AU2022344243A1 (en) | 2024-03-28 |
Family
ID=85507691
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2022344243A Pending AU2022344243A1 (en) | 2021-09-08 | 2022-09-07 | Methods and compositions for modulating a genome |
Country Status (10)
| Country | Link |
|---|---|
| US (1) | US20240374759A1 (https=) |
| EP (1) | EP4399291A4 (https=) |
| JP (1) | JP2024533316A (https=) |
| KR (1) | KR20240099166A (https=) |
| CN (1) | CN118318037A (https=) |
| AU (1) | AU2022344243A1 (https=) |
| CA (1) | CA3231676A1 (https=) |
| IL (1) | IL311219A (https=) |
| MX (1) | MX2024002930A (https=) |
| WO (1) | WO2023039407A2 (https=) |
Families Citing this family (6)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP3844272A1 (en) | 2018-08-28 | 2021-07-07 | Flagship Pioneering Innovations VI, LLC | Methods and compositions for modulating a genome |
| CN116209756A (zh) | 2020-03-04 | 2023-06-02 | 旗舰先锋创新Vi有限责任公司 | 调控基因组的方法和组合物 |
| KR20230053735A (ko) | 2020-03-04 | 2023-04-21 | 플래그쉽 파이어니어링 이노베이션스 브이아이, 엘엘씨 | 게놈의 조정을 위한 개선된 방법 및 조성물 |
| CA3231712A1 (en) | 2021-09-08 | 2023-03-16 | Flagship Pioneering Innovations Vi, Llc | Pah-modulating compositions and methods |
| WO2025235506A2 (en) * | 2024-05-06 | 2025-11-13 | Flagship Pioneering Innovations Vi, Llc | Atp7b-modulating compositions and methods |
| CN118581153A (zh) * | 2024-08-05 | 2024-09-03 | 崖州湾国家实验室 | Dna聚合酶介导的核苷酸序列编辑方法及组合物 |
Family Cites Families (4)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2015021426A1 (en) * | 2013-08-09 | 2015-02-12 | Sage Labs, Inc. | A crispr/cas system-based novel fusion protein and its application in genome editing |
| EP3099801B1 (en) * | 2014-01-31 | 2020-03-18 | Factor Bioscience Inc. | Synthetic rna for use in the treatment of dystrophic epidermolysis bullosa |
| US11542496B2 (en) * | 2017-03-10 | 2023-01-03 | President And Fellows Of Harvard College | Cytosine to guanine base editor |
| US11649442B2 (en) * | 2017-09-08 | 2023-05-16 | The Regents Of The University Of California | RNA-guided endonuclease fusion polypeptides and methods of use thereof |
-
2022
- 2022-09-07 IL IL311219A patent/IL311219A/en unknown
- 2022-09-07 AU AU2022344243A patent/AU2022344243A1/en active Pending
- 2022-09-07 MX MX2024002930A patent/MX2024002930A/es unknown
- 2022-09-07 US US18/690,134 patent/US20240374759A1/en active Pending
- 2022-09-07 JP JP2024515072A patent/JP2024533316A/ja active Pending
- 2022-09-07 CA CA3231676A patent/CA3231676A1/en active Pending
- 2022-09-07 CN CN202280073061.3A patent/CN118318037A/zh active Pending
- 2022-09-07 EP EP22868262.1A patent/EP4399291A4/en active Pending
- 2022-09-07 KR KR1020247011697A patent/KR20240099166A/ko active Pending
- 2022-09-07 WO PCT/US2022/076024 patent/WO2023039407A2/en not_active Ceased
Also Published As
| Publication number | Publication date |
|---|---|
| EP4399291A4 (en) | 2025-10-08 |
| US20240374759A1 (en) | 2024-11-14 |
| CA3231676A1 (en) | 2023-03-16 |
| IL311219A (en) | 2024-05-01 |
| WO2023039407A3 (en) | 2023-04-20 |
| KR20240099166A (ko) | 2024-06-28 |
| JP2024533316A (ja) | 2024-09-12 |
| EP4399291A2 (en) | 2024-07-17 |
| WO2023039407A2 (en) | 2023-03-16 |
| MX2024002930A (es) | 2024-05-29 |
| CN118318037A (zh) | 2024-07-09 |
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| US12024728B2 (en) | Methods and compositions for modulating a genome | |
| JP2023502473A (ja) | リコンビナーゼ組成物及び使用方法 | |
| JP2024533313A (ja) | Hbbを調節する組成物及び方法 | |
| WO2023039447A9 (en) | Serpina-modulating compositions and methods | |
| US20240374759A1 (en) | Methods and compositions for modulating a genome | |
| WO2023108153A2 (en) | Cftr-modulating compositions and methods | |
| JP2024533315A (ja) | Pah調節性組成物及び方法 | |
| AU2023365692A1 (en) | Improved gene editing systems utilizing trans recruiting components | |
| US20250305002A1 (en) | Recruitment in trans of gene editing system components | |
| EP4680744A2 (en) | Serpina-modulating compositions and methods | |
| WO2025235506A2 (en) | Atp7b-modulating compositions and methods | |
| WO2025194124A1 (en) | Modified st1cas9 guide nucleic acids | |
| WO2023225471A2 (en) | Helitron compositions and methods | |
| WO2024148290A2 (en) | Trac and b2m modulating compositions and methods | |
| CN118556123A (zh) | Hbb调节性组合物和方法 | |
| CN118489007A (zh) | 调节基因组的方法和组合物 |
Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| DA3 | Amendments made section 104 |
Free format text: THE NATURE OF THE AMENDMENT IS: AMEND THE NAME OF THE INVENTOR TO READ ALTSHULER, ROBERT CHARLES; BOTHMER, ANNE HELEN; CITORIK, ROBERT JAMES; COTTA-RAMUSINO, CECILIA GIOVANNA SILVIA; KIM, KYUSIK; KOTLAR, RANDI MICHELLE; KUMAR, SANDEEP; RAY, ANANYA; ROQUET, NATHANIEL; RUBENS, JACOB ROSENBLUM; SALOMON, WILLIAM EDWARD; STEINBERG, BARRETT ETHAN; WANG, ZI JUN; AKINCI, ERSIN AND DOUSIS, ATHANASIOS DIMITRI |