AU2002334672A1 - A clone-array pooled shotgun strategy for nucleic acid sequencing - Google Patents

A clone-array pooled shotgun strategy for nucleic acid sequencing

Info

Publication number
AU2002334672A1
AU2002334672A1 AU2002334672A AU2002334672A AU2002334672A1 AU 2002334672 A1 AU2002334672 A1 AU 2002334672A1 AU 2002334672 A AU2002334672 A AU 2002334672A AU 2002334672 A AU2002334672 A AU 2002334672A AU 2002334672 A1 AU2002334672 A1 AU 2002334672A1
Authority
AU
Australia
Prior art keywords
clone
nucleic acid
acid sequencing
shotgun strategy
pooled
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002334672A
Other languages
English (en)
Inventor
Allan Bradley
Wei-Wen Cai
Richard Gibbs
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Seqwright Inc
Original Assignee
Seqwright Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Seqwright Inc filed Critical Seqwright Inc
Publication of AU2002334672A1 publication Critical patent/AU2002334672A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
    • C12N15/1034—Isolating an individual clone by screening libraries
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation

Landscapes

  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Biomedical Technology (AREA)
  • Wood Science & Technology (AREA)
  • Organic Chemistry (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Plant Pathology (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2002334672A 2001-09-24 2002-09-24 A clone-array pooled shotgun strategy for nucleic acid sequencing Abandoned AU2002334672A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/969,111 US6975943B2 (en) 2001-09-24 2001-09-24 Clone-array pooled shotgun strategy for nucleic acid sequencing
US09/969,111 2001-09-24
PCT/US2002/030464 WO2003027311A2 (en) 2001-09-24 2002-09-24 A clone-array pooled shotgun strategy for nucleic acid sequencing

Publications (1)

Publication Number Publication Date
AU2002334672A1 true AU2002334672A1 (en) 2003-04-07

Family

ID=25515191

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002334672A Abandoned AU2002334672A1 (en) 2001-09-24 2002-09-24 A clone-array pooled shotgun strategy for nucleic acid sequencing

Country Status (3)

Country Link
US (1) US6975943B2 (US20030092007A1-20030515-M00001.png)
AU (1) AU2002334672A1 (US20030092007A1-20030515-M00001.png)
WO (1) WO2003027311A2 (US20030092007A1-20030515-M00001.png)

Families Citing this family (25)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7875440B2 (en) 1998-05-01 2011-01-25 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
US6780591B2 (en) 1998-05-01 2004-08-24 Arizona Board Of Regents Method of determining the nucleotide sequence of oligonucleotides and DNA molecules
US20080125978A1 (en) * 2002-10-11 2008-05-29 International Business Machines Corporation Method and apparatus for deriving the genome of an individual
FR2856410B1 (fr) * 2003-06-20 2007-06-15 Integragen Sa Methodes de preparation de puces genetiques et utilisations
US7169560B2 (en) 2003-11-12 2007-01-30 Helicos Biosciences Corporation Short cycle methods for sequencing polynucleotides
JP2005224103A (ja) * 2004-02-10 2005-08-25 Hitachi Ltd Ｄｎａアレイ、それを用いた遺伝子発現解析方法及び有用遺伝子探索方法
CA2557177A1 (en) 2004-02-19 2005-09-01 Stephen Quake Methods and kits for analyzing polynucleotide sequences
JP2006020524A (ja) * 2004-07-06 2006-01-26 Sony Corp 概日リズム制御遺伝子群、ｄｎａチップ、ｄｎａチップを用いた方法
DK1907571T3 (en) 2005-06-15 2017-08-21 Complete Genomics Inc NUCLEIC ACID ANALYSIS USING INCIDENTAL MIXTURES OF NON-OVERLAPPING FRAGMENTS
US7666593B2 (en) 2005-08-26 2010-02-23 Helicos Biosciences Corporation Single molecule sequencing of captured nucleic acids
US20070168197A1 (en) * 2006-01-18 2007-07-19 Nokia Corporation Audio coding
US7397546B2 (en) * 2006-03-08 2008-07-08 Helicos Biosciences Corporation Systems and methods for reducing detected intensity non-uniformity in a laser beam
US20080309926A1 (en) * 2006-03-08 2008-12-18 Aaron Weber Systems and methods for reducing detected intensity non uniformity in a laser beam
EP2038425B1 (en) 2006-07-12 2010-09-15 Keygene N.V. High throughput physical mapping using aflp
US20080281819A1 (en) * 2007-05-10 2008-11-13 The Research Foundation Of State University Of New York Non-random control data set generation for facilitating genomic data processing
US8592150B2 (en) 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
ES2403312T3 (es) 2009-01-13 2013-05-17 Keygene N.V. Nuevas estrategias para la secuenciación del genoma
US9524369B2 (en) 2009-06-15 2016-12-20 Complete Genomics, Inc. Processing and analysis of complex nucleic acid sequence data
WO2011071382A1 (en) 2009-12-10 2011-06-16 Keygene N.V. Polymorfphic whole genome profiling
EP2513333B1 (en) 2009-12-17 2013-10-02 Keygene N.V. Restriction enzyme based whole genome sequencing
EP2663655B1 (en) 2011-01-14 2015-09-02 Keygene N.V. Paired end random sequence based genotyping
US9582309B2 (en) 2014-12-09 2017-02-28 Vmware, Inc. Allocating cost of disk usage to a linked clone virtual machine based on a parameter of usage
US9710296B2 (en) 2014-12-09 2017-07-18 Vmware, Inc. Allocating cost of disk usage to a linked clone virtual machine
US20220336052A1 (en) * 2021-04-19 2022-10-20 University Of Utah Research Foundation Systems and methods for facilitating rapid genome sequence analysis
CN114842911B (zh) * 2022-06-21 2022-09-20 深圳市睿法生物科技有限公司 基于精准医疗的基因检测流程的优化方法及装置

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2002504820A (ja) 1997-06-04 2002-02-12 スミスクライン・ビーチャム・コーポレイション 全長ｃＤＮＡの迅速クローニング法
US20010046669A1 (en) 1999-02-24 2001-11-29 Mccobmie William R. Genetically filtered shotgun sequencing of complex eukaryotic genomes
US20030180775A1 (en) 1999-02-24 2003-09-25 Cold Spring Harbor Laboratory Filtered shotgun sequencing of complex eukaryotic genomes
GB0012186D0 (en) 2000-05-20 2000-07-12 Univ Leeds Treatment of cancer and neurological diseases

Also Published As

Publication number Publication date
US20030092007A1 (en) 2003-05-15
US6975943B2 (en) 2005-12-13
WO2003027311A2 (en) 2003-04-03
WO2003027311A3 (en) 2003-10-30

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Legal Events

Date Code Title Description
MK6 Application lapsed section 142(2)(f)/reg. 8.3(3) - pct applic. not entering national phase