AU2001275523A1 - Deprotection of synthetic oligonucleotides using acrylonitrile scavenger - Google Patents
Deprotection of synthetic oligonucleotides using acrylonitrile scavengerInfo
- Publication number
- AU2001275523A1 AU2001275523A1 AU2001275523A AU7552301A AU2001275523A1 AU 2001275523 A1 AU2001275523 A1 AU 2001275523A1 AU 2001275523 A AU2001275523 A AU 2001275523A AU 7552301 A AU7552301 A AU 7552301A AU 2001275523 A1 AU2001275523 A1 AU 2001275523A1
- Authority
- AU
- Australia
- Prior art keywords
- deprotection
- synthetic oligonucleotides
- acrylonitrile scavenger
- scavenger
- acrylonitrile
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
- NLHHRLWOUZZQLW-UHFFFAOYSA-N Acrylonitrile Chemical compound C=CC#N NLHHRLWOUZZQLW-UHFFFAOYSA-N 0.000 title 1
- 108091034117 Oligonucleotide Proteins 0.000 title 1
- JLCPHMBAVCMARE-UHFFFAOYSA-N [3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[3-[[3-[[3-[[3-[[3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-[[5-(2-amino-6-oxo-1H-purin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxyoxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(5-methyl-2,4-dioxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(6-aminopurin-9-yl)oxolan-2-yl]methoxy-hydroxyphosphoryl]oxy-5-(4-amino-2-oxopyrimidin-1-yl)oxolan-2-yl]methyl [5-(6-aminopurin-9-yl)-2-(hydroxymethyl)oxolan-3-yl] hydrogen phosphate Polymers Cc1cn(C2CC(OP(O)(=O)OCC3OC(CC3OP(O)(=O)OCC3OC(CC3O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c3nc(N)[nH]c4=O)C(COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3COP(O)(=O)OC3CC(OC3CO)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3ccc(N)nc3=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cc(C)c(=O)[nH]c3=O)n3cc(C)c(=O)[nH]c3=O)n3ccc(N)nc3=O)n3cc(C)c(=O)[nH]c3=O)n3cnc4c3nc(N)[nH]c4=O)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)n3cnc4c(N)ncnc34)O2)c(=O)[nH]c1=O JLCPHMBAVCMARE-UHFFFAOYSA-N 0.000 title 1
- 238000010511 deprotection reaction Methods 0.000 title 1
- 239000002516 radical scavenger Substances 0.000 title 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H1/00—Processes for the preparation of sugar derivatives
- C07H1/06—Separation; Purification
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02P—CLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
- Y02P20/00—Technologies relating to chemical industry
- Y02P20/50—Improvements relating to the production of bulk chemicals
- Y02P20/55—Design of synthesis routes, e.g. reducing the use of auxiliary or protecting groups
Landscapes
- Chemical & Material Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Biochemistry (AREA)
- Molecular Biology (AREA)
- Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Saccharide Compounds (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US21075700P | 2000-06-12 | 2000-06-12 | |
| US60210757 | 2000-06-12 | ||
| PCT/US2001/040922 WO2001096358A1 (en) | 2000-06-12 | 2001-06-12 | Deprotection of synthetic oligonucleotides using acrylonitrile scavenger |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AU2001275523A1 true AU2001275523A1 (en) | 2001-12-24 |
Family
ID=22784155
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| AU2001275523A Abandoned AU2001275523A1 (en) | 2000-06-12 | 2001-06-12 | Deprotection of synthetic oligonucleotides using acrylonitrile scavenger |
Country Status (9)
| Country | Link |
|---|---|
| US (2) | US7038027B2 (en) |
| EP (1) | EP1294736A1 (en) |
| JP (1) | JP2004503561A (en) |
| KR (1) | KR20030036218A (en) |
| CN (1) | CN1444595A (en) |
| AU (1) | AU2001275523A1 (en) |
| CA (1) | CA2411356A1 (en) |
| MX (1) | MXPA02012216A (en) |
| WO (1) | WO2001096358A1 (en) |
Families Citing this family (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US6465628B1 (en) * | 1999-02-04 | 2002-10-15 | Isis Pharmaceuticals, Inc. | Process for the synthesis of oligomeric compounds |
| US6768005B2 (en) | 2000-12-20 | 2004-07-27 | Avecia Limited | Process |
| KR20040016826A (en) * | 2000-12-05 | 2004-02-25 | 아베시아 리미티드 | Process for the preparation of phosphorothioate oligonucleotides |
| CA2561741C (en) * | 2004-04-05 | 2016-09-27 | Alnylam Pharmaceuticals, Inc. | Processes and reagents for oligonucleotide synthesis and purification |
| JP4797156B2 (en) * | 2005-03-09 | 2011-10-19 | 国立大学法人東京工業大学 | Method for deprotecting 2 'hydroxyl group of ribonucleoside |
| CA2769446A1 (en) * | 2009-07-30 | 2011-02-03 | Sun Chemical Corporation | A method for odor reduction in non-aqueous dispersions |
| JP2014514367A (en) | 2010-11-15 | 2014-06-19 | サン ケミカル コーポレイション | Compositions and methods for improving coagulation properties and rub resistance of printing inks |
| JP5906447B2 (en) * | 2011-01-13 | 2016-04-20 | 国立研究開発法人産業技術総合研究所 | Epithelial ovarian cancer differentiation marker |
| CN111704644B (en) * | 2020-08-18 | 2020-12-04 | 苏州金唯智生物科技有限公司 | Ammonolysis solution and ammonolysis method |
Family Cites Families (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US4419509A (en) | 1981-08-24 | 1983-12-06 | Eli Lilly And Company | Process for de-cyanoethylating blocked nucleotides |
| US5231191A (en) * | 1987-12-24 | 1993-07-27 | Applied Biosystems, Inc. | Rhodamine phosphoramidite compounds |
| US5348868A (en) | 1992-04-24 | 1994-09-20 | Beckman Instruments, Inc. | Methods and reagents for cleaving and deprotecting oligonucleotides |
| US5804683A (en) * | 1992-05-14 | 1998-09-08 | Ribozyme Pharmaceuticals, Inc. | Deprotection of RNA with alkylamine |
| US5614621A (en) | 1993-07-29 | 1997-03-25 | Isis Pharmaceuticals, Inc. | Process for preparing oligonucleotides using silyl-containing diamino phosphorous reagents |
| US5623068A (en) | 1994-03-07 | 1997-04-22 | Beckman Instruments, Inc. | Synthesis of DNA using substituted phenylacetyl-protected nucleotides |
| US5705621A (en) | 1995-11-17 | 1998-01-06 | Isis Pharmaceuticals, Inc. | Oligomeric phosphite, phosphodiester, Phosphorothioate and phosphorodithioate compounds and intermediates for preparing same |
| US5750672A (en) | 1996-11-22 | 1998-05-12 | Barrskogen, Inc. | Anhydrous amine cleavage of oligonucleotides |
| US5760209A (en) | 1997-03-03 | 1998-06-02 | Isis Pharmaceuticals, Inc. | Protecting group for synthesizing oligonucleotide analogs |
| US6465628B1 (en) * | 1999-02-04 | 2002-10-15 | Isis Pharmaceuticals, Inc. | Process for the synthesis of oligomeric compounds |
-
2001
- 2001-06-12 EP EP01942247A patent/EP1294736A1/en not_active Withdrawn
- 2001-06-12 CA CA002411356A patent/CA2411356A1/en not_active Abandoned
- 2001-06-12 AU AU2001275523A patent/AU2001275523A1/en not_active Abandoned
- 2001-06-12 KR KR1020027016810A patent/KR20030036218A/en not_active Application Discontinuation
- 2001-06-12 CN CN01813659A patent/CN1444595A/en active Pending
- 2001-06-12 WO PCT/US2001/040922 patent/WO2001096358A1/en active Application Filing
- 2001-06-12 JP JP2002510499A patent/JP2004503561A/en active Pending
- 2001-06-12 US US09/879,859 patent/US7038027B2/en not_active Expired - Fee Related
- 2001-06-12 MX MXPA02012216A patent/MXPA02012216A/en unknown
-
2006
- 2006-04-19 US US11/406,601 patent/US20060189799A1/en not_active Abandoned
Also Published As
| Publication number | Publication date |
|---|---|
| EP1294736A1 (en) | 2003-03-26 |
| MXPA02012216A (en) | 2004-08-19 |
| US20060189799A1 (en) | 2006-08-24 |
| US20020072593A1 (en) | 2002-06-13 |
| WO2001096358A1 (en) | 2001-12-20 |
| CN1444595A (en) | 2003-09-24 |
| JP2004503561A (en) | 2004-02-05 |
| US7038027B2 (en) | 2006-05-02 |
| CA2411356A1 (en) | 2001-12-20 |
| KR20030036218A (en) | 2003-05-09 |
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