AU2001247808A1 - Chimeric proteins for detection and quantitation of dna mutations, dna sequence variations, dna damage and dna mismatches - Google Patents
Chimeric proteins for detection and quantitation of dna mutations, dna sequence variations, dna damage and dna mismatchesInfo
- Publication number
- AU2001247808A1 AU2001247808A1 AU2001247808A AU4780801A AU2001247808A1 AU 2001247808 A1 AU2001247808 A1 AU 2001247808A1 AU 2001247808 A AU2001247808 A AU 2001247808A AU 4780801 A AU4780801 A AU 4780801A AU 2001247808 A1 AU2001247808 A1 AU 2001247808A1
- Authority
- AU
- Australia
- Prior art keywords
- dna
- quantitation
- detection
- mismatches
- mutations
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Abandoned
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Y—ENZYMES
- C12Y402/00—Carbon-oxygen lyases (4.2)
- C12Y402/99—Other carbon-oxygen lyases (4.2.99)
- C12Y402/99018—DNA-(apurinic or apyrimidinic site)lyase (4.2.99.18)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/14—Hydrolases (3)
- C12N9/16—Hydrolases (3) acting on ester bonds (3.1)
- C12N9/22—Ribonucleases RNAses, DNAses
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/88—Lyases (4.)
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/90—Isomerases (5.)
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07K—PEPTIDES
- C07K2319/00—Fusion polypeptide
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Health & Medical Sciences (AREA)
- Organic Chemistry (AREA)
- Genetics & Genomics (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- General Health & Medical Sciences (AREA)
- Biochemistry (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biotechnology (AREA)
- Biomedical Technology (AREA)
- Medicinal Chemistry (AREA)
- Peptides Or Proteins (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Enzymes And Modification Thereof (AREA)
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US19276400P | 2000-03-28 | 2000-03-28 | |
US60192764 | 2000-03-28 | ||
US09650855 | 2000-08-29 | ||
US09/650,855 US6365355B1 (en) | 2000-03-28 | 2000-08-29 | Chimeric proteins for detection and quantitation of DNA mutations, DNA sequence variations, DNA damage and DNA mismatches |
PCT/US2001/009700 WO2001073079A2 (en) | 2000-03-28 | 2001-03-26 | Chimeric proteins for detection and quantitation of dna mutations, dna sequence variations, dna damage and dna mismatches |
Publications (1)
Publication Number | Publication Date |
---|---|
AU2001247808A1 true AU2001247808A1 (en) | 2001-10-08 |
Family
ID=26888339
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
AU2001247808A Abandoned AU2001247808A1 (en) | 2000-03-28 | 2001-03-26 | Chimeric proteins for detection and quantitation of dna mutations, dna sequence variations, dna damage and dna mismatches |
Country Status (3)
Country | Link |
---|---|
US (1) | US6365355B1 (en) |
AU (1) | AU2001247808A1 (en) |
WO (1) | WO2001073079A2 (en) |
Families Citing this family (45)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20050130156A1 (en) * | 2002-01-14 | 2005-06-16 | Gerhard Frey | Methods for making polynucleotides and purifying double-stranded polynucleotides |
US20040009498A1 (en) * | 2002-01-14 | 2004-01-15 | Diversa Corporation | Chimeric antigen binding molecules and methods for making and using them |
US20030215837A1 (en) * | 2002-01-14 | 2003-11-20 | Diversa Corporation | Methods for purifying double-stranded nucleic acids lacking base pair mismatches or nucleotide gaps |
US6673552B2 (en) * | 2002-01-14 | 2004-01-06 | Diversa Corporation | Methods for purifying annealed double-stranded oligonucleotides lacking base pair mismatches or nucleotide gaps |
US7563600B2 (en) | 2002-09-12 | 2009-07-21 | Combimatrix Corporation | Microarray synthesis and assembly of gene-length polynucleotides |
US7932025B2 (en) * | 2002-12-10 | 2011-04-26 | Massachusetts Institute Of Technology | Methods for high fidelity production of long nucleic acid molecules with error control |
US7879580B2 (en) * | 2002-12-10 | 2011-02-01 | Massachusetts Institute Of Technology | Methods for high fidelity production of long nucleic acid molecules |
US7316903B2 (en) * | 2003-03-28 | 2008-01-08 | United States Of America As Represented By The Department Of Health And Human Services | Detection of nucleic acid sequence variations using phase Mu transposase |
US20070122817A1 (en) * | 2005-02-28 | 2007-05-31 | George Church | Methods for assembly of high fidelity synthetic polynucleotides |
EP1812598A1 (en) * | 2004-10-18 | 2007-08-01 | Codon Devices, Inc. | Methods for assembly of high fidelity synthetic polynucleotides |
GB2424886A (en) * | 2005-04-04 | 2006-10-11 | Dxs Ltd | Polynucleotide primers against epidermal growth factor receptor and method of detecting gene mutations |
US20070231805A1 (en) * | 2006-03-31 | 2007-10-04 | Baynes Brian M | Nucleic acid assembly optimization using clamped mismatch binding proteins |
WO2008027558A2 (en) | 2006-08-31 | 2008-03-06 | Codon Devices, Inc. | Iterative nucleic acid assembly using activation of vector-encoded traits |
WO2011056872A2 (en) | 2009-11-03 | 2011-05-12 | Gen9, Inc. | Methods and microfluidic devices for the manipulation of droplets in high fidelity polynucleotide assembly |
US9216414B2 (en) | 2009-11-25 | 2015-12-22 | Gen9, Inc. | Microfluidic devices and methods for gene synthesis |
WO2011085075A2 (en) | 2010-01-07 | 2011-07-14 | Gen9, Inc. | Assembly of high fidelity polynucleotides |
US10457935B2 (en) | 2010-11-12 | 2019-10-29 | Gen9, Inc. | Protein arrays and methods of using and making the same |
CN103502448B (en) | 2010-11-12 | 2017-03-29 | Gen9股份有限公司 | The method and apparatus of nucleic acid synthesis |
LT2944693T (en) | 2011-08-26 | 2019-08-26 | Gen9, Inc. | Compositions and methods for high fidelity assembly of nucleic acids |
US9150853B2 (en) | 2012-03-21 | 2015-10-06 | Gen9, Inc. | Methods for screening proteins using DNA encoded chemical libraries as templates for enzyme catalysis |
LT2841601T (en) | 2012-04-24 | 2019-07-10 | Gen9, Inc. | Methods for sorting nucleic acids and multiplexed preparative in vitro cloning |
EP3483311A1 (en) | 2012-06-25 | 2019-05-15 | Gen9, Inc. | Methods for nucleic acid assembly and high throughput sequencing |
CN105637097A (en) | 2013-08-05 | 2016-06-01 | 特韦斯特生物科学公司 | De novo synthesized gene libraries |
CA2975855A1 (en) | 2015-02-04 | 2016-08-11 | Twist Bioscience Corporation | Compositions and methods for synthetic gene assembly |
US10669304B2 (en) | 2015-02-04 | 2020-06-02 | Twist Bioscience Corporation | Methods and devices for de novo oligonucleic acid assembly |
US9981239B2 (en) | 2015-04-21 | 2018-05-29 | Twist Bioscience Corporation | Devices and methods for oligonucleic acid library synthesis |
EP3350314A4 (en) | 2015-09-18 | 2019-02-06 | Twist Bioscience Corporation | Oligonucleic acid variant libraries and synthesis thereof |
KR20180058772A (en) | 2015-09-22 | 2018-06-01 | 트위스트 바이오사이언스 코포레이션 | Flexible substrate for nucleic acid synthesis |
CN108350441B (en) | 2015-10-07 | 2022-09-27 | 诺维信公司 | Polypeptides |
CN115920796A (en) | 2015-12-01 | 2023-04-07 | 特韦斯特生物科学公司 | Functionalized surfaces and preparation thereof |
WO2017170418A1 (en) * | 2016-03-30 | 2017-10-05 | 株式会社カネカ | Polypeptide having endonuclease activity and production method for same |
KR102212257B1 (en) | 2016-08-22 | 2021-02-04 | 트위스트 바이오사이언스 코포레이션 | De novo synthesized nucleic acid library |
WO2018057526A2 (en) | 2016-09-21 | 2018-03-29 | Twist Bioscience Corporation | Nucleic acid based data storage |
EA201991262A1 (en) | 2016-12-16 | 2020-04-07 | Твист Байосайенс Корпорейшн | LIBRARIES OF OPTIONS OF IMMUNOLOGICAL SYNAPSIS AND THEIR SYNTHESIS |
CN118116478A (en) | 2017-02-22 | 2024-05-31 | 特韦斯特生物科学公司 | Nucleic acid-based data storage |
CN110913865A (en) | 2017-03-15 | 2020-03-24 | 特韦斯特生物科学公司 | Library of variants of immune synapses and synthesis thereof |
WO2018231864A1 (en) | 2017-06-12 | 2018-12-20 | Twist Bioscience Corporation | Methods for seamless nucleic acid assembly |
KR20240013290A (en) | 2017-06-12 | 2024-01-30 | 트위스트 바이오사이언스 코포레이션 | Methods for seamless nucleic acid assembly |
KR20200047706A (en) | 2017-09-11 | 2020-05-07 | 트위스트 바이오사이언스 코포레이션 | GPCR binding protein and method for synthesis thereof |
EP3697529B1 (en) | 2017-10-20 | 2023-05-24 | Twist Bioscience Corporation | Heated nanowells for polynucleotide synthesis |
WO2019136175A1 (en) | 2018-01-04 | 2019-07-11 | Twist Bioscience Corporation | Dna-based digital information storage |
CA3100739A1 (en) | 2018-05-18 | 2019-11-21 | Twist Bioscience Corporation | Polynucleotides, reagents, and methods for nucleic acid hybridization |
WO2020176678A1 (en) | 2019-02-26 | 2020-09-03 | Twist Bioscience Corporation | Variant nucleic acid libraries for glp1 receptor |
CA3131691A1 (en) | 2019-02-26 | 2020-09-03 | Twist Bioscience Corporation | Variant nucleic acid libraries for antibody optimization |
AU2020298294A1 (en) | 2019-06-21 | 2022-02-17 | Twist Bioscience Corporation | Barcode-based nucleic acid sequence assembly |
Family Cites Families (27)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US6008031A (en) * | 1989-05-12 | 1999-12-28 | Duke University | Method of analysis and manipulation of DNA utilizing mismatch repair systems |
US5556750A (en) * | 1989-05-12 | 1996-09-17 | Duke University | Methods and kits for fractionating a population of DNA molecules based on the presence or absence of a base-pair mismatch utilizing mismatch repair systems |
JPH06509417A (en) | 1991-07-16 | 1994-10-20 | トランスメッド バイオテック インコーポレイテッド | Method and configuration for simultaneous analysis of multiple samples |
CA2113716A1 (en) * | 1991-07-19 | 1993-02-04 | Robert E. Wagner, Jr. | Method for detection of mutations |
WO1993020233A1 (en) * | 1992-03-27 | 1993-10-14 | University Of Maryland At Baltimore | Detection of gene mutations with mismatch repair enzymes |
WO1993022457A1 (en) * | 1992-04-24 | 1993-11-11 | Massachusetts Institute Of Technology | Screening for genetic variation |
US6027877A (en) * | 1993-11-04 | 2000-02-22 | Gene Check, Inc. | Use of immobilized mismatch binding protein for detection of mutations and polymorphisms, purification of amplified DNA samples and allele identification |
US6051397A (en) | 1993-11-16 | 2000-04-18 | Max Planck Gesellschaft Zur Forderung Der Wissenschaften | DNA encoding MCK-10, a novel receptor tyrosine kinase |
US5922855A (en) | 1993-12-17 | 1999-07-13 | Oregon Health Sciences University | Mammalian DNA mismatch repair genes MLH1 and PMS1 |
US5919623A (en) * | 1994-04-27 | 1999-07-06 | St. James's And Seacroft University Hospitals Nhs Trust | Nucleic acid mutation assays |
WO1995032225A1 (en) | 1994-05-23 | 1995-11-30 | The Salk Institute For Biological Studies | Method for site-specific integration of nucleic acids and related products |
US5834318A (en) | 1995-05-10 | 1998-11-10 | Bayer Corporation | Screening of combinatorial peptide libraries for selection of peptide ligand useful in affinity purification of target proteins |
FR2734567B1 (en) | 1995-05-26 | 1997-08-08 | Commissariat Energie Atomique | CHIMERIC PROTEINS ACTIVATING TRANSCRIPTION BY POLYMERASE III, THEIR USE FOR THE DETECTION AND ANALYSIS OF INTERACTIONS BETWEEN PROTEINS, AND GENES ENCODING SAID PROTEINS |
US5707806A (en) * | 1995-06-07 | 1998-01-13 | Genzyme Corporation | Direct sequence identification of mutations by cleavage- and ligation-associated mutation-specific sequencing |
US5736330A (en) | 1995-10-11 | 1998-04-07 | Luminex Corporation | Method and compositions for flow cytometric determination of DNA sequences |
GB9521788D0 (en) * | 1995-10-24 | 1996-01-03 | Univ Leeds | DNA repair |
US6232095B1 (en) * | 1995-11-28 | 2001-05-15 | Thomas Jefferson University | Recombinant helix modification recognition proteins and uses thereof |
WO1997031612A2 (en) | 1996-02-27 | 1997-09-04 | New York University | Mammalian endonuclease iii, and diagnostic and therapeutic uses thereof |
US6046036A (en) | 1996-10-25 | 2000-04-04 | Advanced Research And Technology Institute | DNA sequences encoding fusions of DNA repair proteins and uses thereof |
JPH10215897A (en) | 1997-02-05 | 1998-08-18 | Bunshi Bio Photonics Kenkyusho:Kk | Detection of mutant cell by chromosomal reciprocal translocation, probe kit for the same detection and detector therefor |
US6365347B1 (en) | 1997-04-11 | 2002-04-02 | The Regents Of The University Of California | Method for identifying disruptors of biological pathways using genetic selection |
WO1998046793A1 (en) * | 1997-04-16 | 1998-10-22 | Trevigen, Inc. | Detection and mapping of point mutations using partial digestion |
US5948627A (en) | 1997-05-30 | 1999-09-07 | One Lambda | Immunobead flow cytometric detection of anti-HLA panel-reactive antibody |
EP1032701A1 (en) | 1997-10-28 | 2000-09-06 | The Regents of The University of California | Dna base mismatch detection using flow cytometry |
WO1999036564A1 (en) | 1998-01-16 | 1999-07-22 | Luminex Corporation | Multiplexed analysis of clinical specimens apparatus and methods |
EP1053352B1 (en) * | 1998-02-04 | 2002-09-18 | Variagenics, Inc. | Mismatch detection techniques |
WO1999042622A1 (en) * | 1998-02-23 | 1999-08-26 | Dana-Farber Cancer Institute, Inc. | Method for identifying mismatch repair glycosylase reactive sites, compound and uses thereof_____________________________________ |
-
2000
- 2000-08-29 US US09/650,855 patent/US6365355B1/en not_active Expired - Fee Related
-
2001
- 2001-03-26 AU AU2001247808A patent/AU2001247808A1/en not_active Abandoned
- 2001-03-26 WO PCT/US2001/009700 patent/WO2001073079A2/en active Application Filing
Also Published As
Publication number | Publication date |
---|---|
WO2001073079A3 (en) | 2002-05-16 |
WO2001073079A2 (en) | 2001-10-04 |
US6365355B1 (en) | 2002-04-02 |
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