AR084631A1 - Analisis de datos de secuencia de adn - Google Patents
Analisis de datos de secuencia de adnInfo
- Publication number
- AR084631A1 AR084631A1 ARP110104982A ARP110104982A AR084631A1 AR 084631 A1 AR084631 A1 AR 084631A1 AR P110104982 A ARP110104982 A AR P110104982A AR P110104982 A ARP110104982 A AR P110104982A AR 084631 A1 AR084631 A1 AR 084631A1
- Authority
- AR
- Argentina
- Prior art keywords
- sequences
- sequence data
- mutations
- data analysis
- data
- Prior art date
Links
Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
Landscapes
- Physics & Mathematics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Biotechnology (AREA)
- Evolutionary Biology (AREA)
- General Health & Medical Sciences (AREA)
- Medical Informatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
Se brindan métodos y sistemas para el análisis de datos. En una de las realizaciones, se puede brindar un método para el análisis que incluye electrónicamente recibir datos de las secuencias relativas a una pluralidad de secuencias y a una secuencia de referencia, vinculando los datos de las secuencias con al menos uno de los dos grupos; identificar una pluralidad de secuencias de lectura de alta calidad a partir de una pluralidad de secuencias; extraer una pluralidad de secuencias de lectura única a partir de una pluralidad de secuencias de lectura de alta calidad y alinear la pluralidad de secuencias de lectura única en contraposición a los datos de una secuencia de referencia que corresponde a la muestra de referencia. El método puede además identificar mutaciones en una ubicación seleccionada, mostrar las mutaciones seleccionadas y priorizar las tecnologías que causan las mutaciones conforme según su eficacia. En un ejemplo, los sistemas y los métodos son usados para caracterizar la actividad de varios tipos de ZFN (nucleasas de dedos de zinc).
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201061428191P | 2010-12-29 | 2010-12-29 | |
| US201161503784P | 2011-07-01 | 2011-07-01 | |
| US13/332,242 US20120173153A1 (en) | 2010-12-29 | 2011-12-20 | Data analysis of dna sequences |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| AR084631A1 true AR084631A1 (es) | 2013-05-29 |
Family
ID=45509679
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ARP110104982A AR084631A1 (es) | 2010-12-29 | 2011-12-28 | Analisis de datos de secuencia de adn |
Country Status (13)
| Country | Link |
|---|---|
| US (1) | US20120173153A1 (es) |
| EP (1) | EP2659411A1 (es) |
| JP (1) | JP6066924B2 (es) |
| KR (1) | KR20140006846A (es) |
| CN (1) | CN103403725A (es) |
| AR (1) | AR084631A1 (es) |
| AU (1) | AU2011352786B2 (es) |
| BR (1) | BR112013016631A2 (es) |
| CA (1) | CA2823061A1 (es) |
| IL (1) | IL227246A (es) |
| RU (1) | RU2013135282A (es) |
| WO (1) | WO2012092039A1 (es) |
| ZA (1) | ZA201305274B (es) |
Families Citing this family (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US20140195216A1 (en) * | 2013-01-08 | 2014-07-10 | Imperium Biotechnologies, Inc. | Computational design of ideotypically modulated pharmacoeffectors for selective cell treatment |
| RU2019128647A (ru) | 2013-11-04 | 2019-11-05 | ДАУ АГРОСАЙЕНСИЗ ЭлЭлСи | Оптимальные локусы кукурузы |
| CN106232821A (zh) | 2013-11-04 | 2016-12-14 | 美国陶氏益农公司 | 最优大豆座位 |
| CN104200135A (zh) * | 2014-08-30 | 2014-12-10 | 北京工业大学 | 基于MFA score和排除冗余的基因表达谱特征选择方法 |
| EP3291114B1 (en) | 2015-04-30 | 2024-01-17 | XCOO Inc. | Genome analysis device and genome visualization method |
| US10395759B2 (en) | 2015-05-18 | 2019-08-27 | Regeneron Pharmaceuticals, Inc. | Methods and systems for copy number variant detection |
| WO2017024138A1 (en) * | 2015-08-06 | 2017-02-09 | Arc Bio, Llc | Systems and methods for genomic analysis |
| CN108885648A (zh) * | 2016-02-09 | 2018-11-23 | 托马生物科学公司 | 用于分析核酸的系统和方法 |
| EP3559266A4 (en) * | 2017-12-29 | 2020-12-02 | ACT Genomics (IP) Co., Ltd. | METHOD AND SYSTEM FOR ALIGNING SEQUENCES AND CALLING A VARIANT |
| KR102488671B1 (ko) | 2020-09-15 | 2023-01-13 | 전남대학교산학협력단 | Dna 연성 정보 연산 방법, 이를 위한 dna 저장 장치 및 이를 위한 프로그램 |
Family Cites Families (5)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CA2366559C (en) * | 1999-03-23 | 2011-03-08 | Biovation Limited | Protein isolation and analysis |
| AU2008305568B2 (en) * | 2007-09-27 | 2013-11-21 | Corteva Agriscience Llc | Engineered zinc finger proteins targeting 5-enolpyruvyl shikimate-3-phosphate synthase genes |
| SG10201609144RA (en) * | 2008-08-22 | 2016-12-29 | Sangamo Biosciences Inc | Methods and compositions for targeted single-stranded cleavage and targeted integration |
| CN101429559A (zh) * | 2008-12-12 | 2009-05-13 | 深圳华大基因研究院 | 一种环境微生物检测方法和系统 |
| CA2755192C (en) * | 2009-03-20 | 2018-09-11 | Sangamo Biosciences, Inc. | Modification of cxcr4 using engineered zinc finger proteins |
-
2011
- 2011-12-20 KR KR1020137019861A patent/KR20140006846A/ko not_active Application Discontinuation
- 2011-12-20 JP JP2013547551A patent/JP6066924B2/ja not_active Expired - Fee Related
- 2011-12-20 RU RU2013135282/10A patent/RU2013135282A/ru unknown
- 2011-12-20 US US13/332,242 patent/US20120173153A1/en not_active Abandoned
- 2011-12-20 CA CA2823061A patent/CA2823061A1/en not_active Abandoned
- 2011-12-20 AU AU2011352786A patent/AU2011352786B2/en not_active Ceased
- 2011-12-20 EP EP11811247.3A patent/EP2659411A1/en not_active Withdrawn
- 2011-12-20 CN CN2011800687314A patent/CN103403725A/zh active Pending
- 2011-12-20 WO PCT/US2011/066284 patent/WO2012092039A1/en active Application Filing
- 2011-12-20 BR BR112013016631A patent/BR112013016631A2/pt not_active Application Discontinuation
- 2011-12-28 AR ARP110104982A patent/AR084631A1/es unknown
-
2013
- 2013-06-27 IL IL227246A patent/IL227246A/en active IP Right Grant
- 2013-07-12 ZA ZA2013/05274A patent/ZA201305274B/en unknown
Also Published As
| Publication number | Publication date |
|---|---|
| WO2012092039A1 (en) | 2012-07-05 |
| US20120173153A1 (en) | 2012-07-05 |
| RU2013135282A (ru) | 2015-02-10 |
| CN103403725A (zh) | 2013-11-20 |
| EP2659411A1 (en) | 2013-11-06 |
| IL227246A (en) | 2017-03-30 |
| AU2011352786A1 (en) | 2013-08-01 |
| JP2014505935A (ja) | 2014-03-06 |
| CA2823061A1 (en) | 2012-07-05 |
| ZA201305274B (en) | 2014-09-25 |
| KR20140006846A (ko) | 2014-01-16 |
| BR112013016631A2 (pt) | 2016-10-04 |
| JP6066924B2 (ja) | 2017-01-25 |
| AU2011352786B2 (en) | 2016-09-22 |
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Legal Events
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|---|---|---|---|
| FB | Suspension of granting procedure |