AP954A - Xanthone analogs for the treatment of infectious diseases. - Google Patents

Abstract

Methods of inhibiting the growth of protozoan parasites are disclosed. The methods comprise contacting the protozoan parasites with compositions comprising xanthones or xanthone derivatives such as 2,3,4,5,6-pentahydroxyxanthone. The invention includes the use of these compounds in the manufacture of preparations for the treatment of patients infected with protozoan parasites.

Description

XANTHOME ANALOGS FOR TEE TREATMENT

OF INFECTIOUS DISEASES

TECHNICAL FIELD

This invention pertains to therapeutic compositions for the treatment of infectious diseases.

ACKNOWLEDGMENT OF U.S. GOVERNMENT SUPPORT

This invention was made with partial support from the United States Government to Drs. Michael K. Riscoe and David J. Hinrichs through the Veterans Affairs Merit Review System. The U.S. Government may have certain rights to this invention.

BACKGROUND OF THE INVENTION

Protozoan parasites cause diseases such as malaria, trypanosomiasis, Chagas' disease, leishmaniasis, giardiasis, and amoebiasis. These and other protozoan parasite diseases have historically occurred in tropical and sub-tropical areas where they cause widespread damage to human populations. A-lthough they receive little attention in the Western world, protozoan diseases affect more people worldwide than diseases brought on by any other biological cause (Heyneman, 1988).

Today, malaria remains the most destructive single infectious disease in the developing world. It is responsible for more human energy loss, more debilitation, more loss of work capacity, and more economic damage than any-other human ailment facing the world today (Heyneman, 1988) . The World Health Organization estimates that 1 to 2 million deaths are caused by malaria each year in Africa alone; most of these are children under the age of five (World Health

Organization, 1991) . In addition, over 300 million peoole worldwide are believed to be chronically infected, and each year nearly one third ot these

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2the individuals will suffer acute manifestations cf ' disease .

Today, the pathologic capacity of protozoa is being increasingly demonstrated in the Western world among the victims of AIDS (Acquired Immunodeficiency

Syndrome). AIDS depletes the immune syscsm of affected individuals; this allows opportunistic agents which would be defeated by an active immune system to infect AIDS patients. Several protozoa have emerged as important opportunistic infections in AIDS patients including Cryptosporidium parvus, Entamoeba histolytica, Giardia lamblia, Pneumocystis carinii (which may be a fungal or protozoal pathogen), and Toxoplasmosis gondii.

Despite the prevalence and significance of protozoan- infections, therapy for these diseases is generally poor or in need of improvement . Many chemotherapeutic agents used to treat protozoan infections are non-specific cytotoxins that are highly toxic and cause severe side effects in patients.

However, these drugs are used because there are no better alternatives. For example, giardiasis and amoebiasis are treated using metronidazole (a nitroimidazole) , but the use of this drug is clouded by its mutagenic potential (Campbell, 198 6) and its adverse interaction with alcohol. For trypanosomiasis and leishmaniasis standard therapies (suramin, melarsoproi, and pentavalent antimonials) are dangerously toxic, occasionally fatal, and often ineffective (Mehrahtu,

1989 ; Grogl et al. , 1992) . Other drugs are becoming ineffective due to emerging resistance. In the case of malaria, effective therapy has previously been provided by chloroguine but its efficacy is now threatened by che rapid emergence of drug resistant strains of Plasmodium falciparum, the causative agent for the most severe, often fatal, form of the disease (Cowman, 1990) . Other protozoal infections such as cryptosporidiosis or Chacas' disease have no oroven curative agenc.

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-3DISCUSSION

As a result of studies aimed at developing anti-parasitic agents, it has been found that xanthones and a wide range of xanthone derivatives and structurally related compounds, as shown in formula XI below, have potent anti-parasitic activity. The compounds have broad-spectrum anti10 microbial activity, including anti-fungal activity against Candida, albicans and Apergillus fumigatus.

Formula XI:

wherein:

A is oxygen, substituted antimony (stibium), sulfur or N-R' wherein R' is K, OH, alkyl, haloalkyl, aryl or haloaryl; and

Rj^-Rg are independently selected from the group 25 consisting of H, OH, halogen, aryl, arylamine, alkyl, alkene, substituted alkyl (such as alkylamine, alkylthio and haloalkyl), amino, ester, ether and nitro groups and O-linked and C-linked carbohydrates.

Examples of substituted antimony include 30 antimonial oxides and antimony substituted with hydroxy, chlorine, alkyl and aryl groups (e.g. SbCl, SbCl₃, SbOH, Sb (0) (OH) ) .

In another embodiment, A .is oxygen, sulfur or NH, and R_t-R_a are independently selected from the group

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- 4 consisting of H, OH, aryl, haloaryl, arylamine, alkyl, alkene substituted alkyl, halogen, amino, ester, ether and nitro groups .

In other embodiments, A is oxygen and H_x-H₈ are 5 independently selected from the group consisting of H,

OH, and acetoxy (CH₃C(O)O) .

Other embodiments include compounds according to formula X2

Formula X2

O

II

R3 R4 wherein A is oxygen, sulfur or ΝΉ, and rd-Rs are independently selected from the group consisting of H, OH, aryl, arylamine, alkyl, alkene substituted alkyl, halogen, amino, ester, ether and nitro groups. In particular embodiments of the present invention, the term alkyl refers to substituents having lower alkyl groups, i.e., 03.-03.(,.

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Other embodiments, the formulae :

Formula X3:

are compounds according to

Ra

O

I

R4

A

0 9 5 A

-5 Formula X4:

wherein A is selected from the group consisting of oxygen, sulfur and NH, and Rj^-Rg are independently selected from the group consisting of H, OH or an ester group, such as OCOCH₃ or OCO(CH₂)₃CH₃ or a carbamate ester. In preferred embodiments, the R₂ and R₅ groups are esters. In yet other embodiments, A is oxygen and R₂-R_s are all hydroxy; in further preferred embodiments, at least one. of R_x and R₆ are H.

Other embodiments of the formula XI compounds are compounds having the following formulae-. Formula X5:

O

II

OH OH

ZV i l 0 / 8 6 /d/dV

OH

OH

AP 00954

-6Formula Χ6Ξ:

wherein A is oxygen, sulfur or NH and Ξ is an ester. Specific examples of such compounds include 2,3,4,5,6pentahydroxyxanthone; 2,3,4,5,6,-pentaacetoxyxanthone; 2,3,4,5,6,7,-hexahydroxyxanthone; 2,3,4,5,6,7,hexaacetoxyxanthons; 2,3,4,5,6-pentahydroxyacridone; 2,3,4,5,6, -pentaacetoxyacridone ,· 2,3,4,5,6,7,hexahydroxyacridone,· 2,3,4,5,6,7,-hexaacetoxyacridone ; 2,3,4,5,6-pentahydroxythioxanthone; 2,3,4,5,6,pentaacstoxythioxanthone ,· 2,3,4,5,6,7,hexahydroxythioxanthone; and 2,3,4,5,6,7,hexaacetoxythioxanthone.

Other embodiments . of the formula

XI compounds are 2,3,4,5,6,-pentahydroxyxanthcne and esterified forms of this compound, including 2,3,4,5,6pentaacetoxyxanthone and 2,3,4,5,6,7-hexahydroxyxanthone and esterified forms of this compound, including 2,3,4,5,6,7-hexaacetoxyxanthone.

The present invention relates to the use of compositions for the treatment of diseases such as malaria, the compositions including a compound according to formula XI. Also disclosed is a method of inhibiting the growth of a microbial pathogen comprising providing a sufficient amount of a formula XI compound and contacting the microbial pathogen with this compound. Such a method is applicable to inhibit microbial growth in vivo and in vitro.

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-7Certain compounds having the underlying xanthone ring structure depicted in formula XI bind to, and inhibit the polymerization of, heme. A number of pathogens, including Plasmodium, a causative agent of malaria, degrade hemoglobin to obtain amino acids, and in so doing liberate toxic heme (Olliaro and Goldberg, 1995) . To avoid the toxic effects of the liberated heme, these pathogens polymerize the heme to form hemozoin. The compounds disclosed herein which are shown to inhibit heme polymerization may thus be used to block heme polymerization and therefore to treat infections caused by these pathogens. It is self-evident that these heme complexing compounds may kill pathogens by preventing these organisms from gaining access to the host's supply of heme iron, or by causing build-up of toxic levels of heme in the organism's vacuole.

Compounds which are herein disclosed to inhibit heme polymerization may be represented by the structure

X - Y - Z wherein X is a group capable of interacting with the iron atom in heme;

Y is a planar aromatic system capable of interacting with the porphyrin ring of heme through overlapping pi-pi orbitals; and

Z represents one or more groups capable of interacting with at least one carboxylate side group of heme. In preferred embodiments, these compounds are formula XH compounds, having a structure:

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-a wherein :

A is oxygen, substituted antimony (stibium), sulfu:

N-R' wb is

OH, alkyl, haloalkyl, preferably lower alkyl or lower haloalkyl wherein 5 lower means 10 or fewer carbon atoms, aryl or haloarvl;

Rx-Rj and R_s-R_a are independently selected from the group consisting of K, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyi), amino, ester and nitro groups and O-linked and C-linked carbohydrates;

at least one (and preferably both) of the R₄ and R_s substituent pair is selected from the group consisting of amino, substituted amino, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamiainium, gaunidinium, alkylguanidinium, hydroxy, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxvhydroxy groups, COOH, alkyl-COOH, CONH₂ and alkyl2 0 CONH₂; and the other member of the R₄ and R_s substituent pair is selected from the group consisting of K, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyi), amino, substituted amino, ester and nitro groups, O-linked and C-linked carbohydrates, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamiainium, guanidinium, alkylguanidinium, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxvhydroxy groups, COOH, alkyl-COOK, CQNH₂ and alkylCONK₂. In preferred embodiments, both R₄ and R_s are selected from the group consisting of amino, substituted amino, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamiainium, guanidinium, alkylguanidinium, hydroxy, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxyhydroxy

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-9groups, and carboxamide derivatives of hydroxy, alkylhydroxy and alkoxyhydroxy groups .

Examples of formula XH compounds include 4,5dihvdroxyxanthone, 2,3,4 -trihydroxyxanthone, 3,4,5,6tetrahydroxyxanthone, 2,3,4,5,6 -pentahydroxyxanthone , 1,3,5,6,7-pentahydroxyxanthone , 2,3,4,5,6,7hexahydroxyxanthone; 4 , 5-bis- ( (/3diethylamino)ethoxy)xanthone; and 3,6-dihydroxy-4,5-bis (piperidinomethvl)xanthone.

Formula XI and XH compounds can be administered to patients in a pro-drug form, typically a corresponding substituted benzophenone which will react with oxidant radicals under physiological conditions to produce the active formula XI or XH comp;ound (Winter et al., 1996).

SUMMARY OF THE INVENTION

According to the present invention, there is provided a method of inhibiting the growth of a protozoan parasite, the method comprising the steps of:

providing an effective amount of a composition comprising a compound having a formula

m ι o / β 6 /d/av wherein A is oxygen, substituted antimony (stibium), sulfur, or N-R' wherein R' is H, hydroxy, alkyl, haloalkyi, aryl or haloaryl, and R-^Rg are independently selected from the group consisting of H, OH, aryl, arylamine, alkyl, substituted alkyl, halogen, amino, ester and nitro groups, and 0-linked and C-linked carbohydrates; and

A ^s~, «' *

-9Acontacting the protozoan parasite with the compound .

The present invention extends to the use of a 5 non-therapeutic method of inhibiting the growth of a protozoan parasite, the method comprising the steps of:

providing an effective amount of a composition comprising a compound having a formula

Ac A4 wherein A is oxygen, substituted antimony (stibium), sulfur, or N-R' wherein R' is H, hydroxy, alkyl, haloalkyl, aryl or haloaryl, and R]_-R₈ are independently selected from the group consisting of H, OH, aryl, arylamine, alkyl, substituted alkyl, halogen, amino, ester and nitro groups, and O-linked and C-linked carbohydrates; and contacting the protozoan parasite with the compound.

The present invention extends, further, to a substance or composition for use in a method of inhibiting the growth of a protozoan parasite, said substance or composition comprising a compound having a formula

AP/P/ 9 8 / 0 1 3 <7 wherein A is oxygen, substituted antimony (stibium), sulfur, or N-R' wherein R' is H, hydroxy, alkyl, haloalkyl, aryl or haloaryl, and R₁-R_s are independently selected from the group consisting of H, OH, aryl,

AP 00954

-9Barylamine, alkyl, substituted alkyl, halogen, amino, ester, and nitro groups, and 0-linked and C-linked carbohydrates ,and said method comprising contacting the 5 protozoan parasite with said substance or composition.

In said compound, R_x and R_a are preferably H.

The step of contacting the parasite with the preparation may comprise administering a therapeutically effective dosage of the compound to a patient infected with the parasite, and the protozoan parasite may be a Plasmodium sp. or a Leishmania sp.

The compound used in the present invention may be selected from the following group, the amount sufficient to inhibit the growth of the parasite: 2 , 3 , 4 , 5, 6-pentahydroxyxanthone; 2,3,4, 5, 6 pentaacetoxyxanthone; 2,3,4,5,6,7-hexahydroxyxanthone;

2,3,4,5,6,7-hexaacetoxyxanthone, and then the protozoan parasite may be selected from the group consisting of Leishmania donovani, Plasmodium falciparum, Giardia lamblia, Trypanosoma gambiense, Trypanasoma cruzi, Cryptosporidium parvum, Entamoeba histolytica,

Pneumocystis carinii, and Toxoplasmosis gondii.

BRIEF DESCRIPTION OF THE FIGURES Fig. 1 illustrates a proposed mechanism for the formation of 2,3,4,5,6-pentahydroxyxanthone from the metabolic activation of exifone by rufigallol within a red blood cell infected with the Plasmodium parasite.

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-10Fic. 2 is a schematic depiction of hemoglobin digestion (with the concomitant release of heme) by the intracellular oarasite Plasmodium ialcLoarum.

Fig. 3 is a graph showing the inhibition of in vitro heme polymerization by compound X5 (A=O) ( 2,3,4,5,□-pentahydroxyxanthone) . Heme and X5 (A=O) concentrations were 25 μΜ. Open diamonds indicate heme alone (control), filled diamonds represent heme and X5 (A=0) together.

Fig. 4 is a computer simulation of compound X6 (A=0) (2,3,4,5,6,7-hexahydroxyxanthone) complexing with free heme .

Fig 5. Shows the structure of 45-DEAE-X (4,5bis-( (/3-diethylamino) ethoxy) xanthone) and formation of the diprotonated form upon entry of this compound into the parasite digestive vacuole.

20.

DETAILED DESCRIPTION

1. Definitions

The phrase a compound according to formula XI and a xanthone derivative according to formula XI refer to a compound having the following structure:

AP/P/ 9 8/0 1 3 4,7

wherein :

A is oxygen, substituted antimony (stibium), sulfur or N-R' wherein R' is H, OH, alkyl, haloalkyl, oreferablv lower alkyl or lower haloalkyl wherein lower means 10 cr fewer carbon atoms, aryl or haloaryl; and

AP 00954

-1110

R_x-R_a are independently selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyl), amino, ester and nitro groups and O-linked and C-linked carbohydrates. In alternative embodiments, an alkyl substituent is a lower alkyl.

References to compounds such as an X5 compound refer to the compounds shown in the Summary of the Invention section above. Where a particular substituent in the formula is intended, it is given parenthetically. For example X5 (A=O) refers to a compound according to formula X5 wherein the A substituent is oxygen, i.e., 2,3,4,5,6 -pentahyaroxyxanthone .

Compounds which may be used to inhibit heme polymerization (and therefore to treat certain parasitic diseases such as malaria) are referred to as formula XH compounds. A formula XH compound is a compound broadly defined as :

X - Y - Z wherein X is a group capable of interacting with the iron atom in heme;

Y is a planar aromatic system capable of interacting with the porphyrin ring of heme through overlapping pi-pi orbitals; and

Z represents one or more groups capable of interacting with at least one carboxylate side group of heme .

In preferred embodiments, a formula XH compound has the following structure:

AP/P/ 9 8/ 0 1 3 47 wherein .·

AP 00954

-12A is oxygen, substituted antimony (stibium), sulfur or N-R' wherein R' is K, OH, alkyl, haloalkvl, preferably lower alkyl or lower haloalkvl wherein lower means 10 or fewer carbon atoms, aryl or haloaryl;

R_l-R₃ and R_s-R_g are independently selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyl), amino, ester and nitro groups and O-linked and C-linked carbohydrates;

at least one member of the R„ and R_s substituent pair (and preferably both) is selected from the group consisting of amino, substituted amino, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamidinium, guanidinium, alkylguanidinium, hydroxy, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxysubstituted amine, azido, carboxylic eszers of hydroxy, alkylhydroxy and alkoxyhydroxy groups, COOH, alkvl-COOH, CONH, and alkvl-CONH₂; and the other member of the R₄ and R_s substituent pair is selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyl), amino, subsZituzed amino, ester and nitro groups, O-linked and

C-linked carbohydrates, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamidinium, guanidinium, alkylguanidinium, alkylhydroxy, a1koxy hydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxyhydroxy groups, COOK, alkyl-COOH, CONH₂and alkylconh₂ .

As used herein, the term alkyl encompasses alkanes, alkenes and alkynes, including branched forms, isomers and stereoisomers. In cerzain embodimenzs, an alkyl is a lower alkyl, meaning an alkyl having 10 or fewer carbon atoms .

The terms eszer and eszerificszicn are used herein as ordinarily understood in zhe chemical arzs,

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-13 see, for example, Morrison and Boyd, Orcranic Chemistry, Allyn & Bacon, Inc., Boston, 1983, herein incorporated by reference. Thus, an ester may be formed by, for example, the combination of an alcohol and an organic acid, with the concurrent elimination of water. The process of forming an ester is termed esterification. For example, the formula XI compound 2,3,4,5,6pentahydroxyxanthone may be esterified by reaction with appropriate acid anhydrides resulting in the net replacement of one or more hydroxyl substituents with ester substituents including, but not limited to: acetoxy (OCOCH₃) ; propionyloxy (OCOCH₂CH₃) ; and butyryloxy OCO (CH₂) ₂CH₃) substituents. Esters produced in this manner may be generally represented by the formula OCO (CH₂) _nCH₃ wherein n is zero or a positive integer. In particular embodiments, the term ester as used herein refers to an ester wherein n is 1-10.

A microbial pathogen¹' is a microorganism capable of causing disease in an animal . The term microbial pathogen includes bacterial, mycoplasmal, fungal, helminth and protozoan organisms. Protozoan parasites are a subclass of microbial pathogens, being protozoan organisms that are capable of invading, colonizing and, under appropriate conditions, causing disease in an animal. Examples of protozoan parasites include Leishmania donovani, Plasmodium falciparum, Giardia lamblia, Trypanosoma gambiense and Trypanasoma cruzi. See generally, Robbins et al., Pathologic Basis of Disease (Saunders, 1984) 273-75, 360-83.

A microbial infection is a disease caused by a microbial pathogen.

A compound having anti-microbial activity is a compound that is capable of inhibiting the growth of a microbial oathogen as determined in in vivo or in vitro assays of the kind normally employed to determine minimum inhibitory concentrations (MICs) or 50¾ inhibitory concentrations (IC_SQ) of an antimicrobial agent .

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-14An oxidant agent is an agent having the ability to produce or liberate free radical oxygen species or to render parasites or their host cells more susceptible to oxygen radical attack, or having the capacity of oxidizing another compound. Examples of oxidant agents in this general sense include ascorbic acid, hydrogen peroxide, primaquine (or its metabolites) and gamma radiation.

2. Methods

A. Methods for determining biological activity The anti-parasitic activity of the compounds of the present invention was determined using two different parasites : Plasmodium falciparum, a causative agent of malaria; and Leishmania donovani, a causative agent of leishmaniasis. The activity of the compounds against yeast was determined using Candida albicans.

i Assay for anti-malarial activity

The D6 strain of P. falciparum was cultured in Group A* human erythrocytes and suspended at a 3.3% hematocrit in RPMI-1640 (Gibco, Grand Island, NY) (containing 4g/L glucose, 50mg/L gentamicin and 10% group A* human serum), buffered with 25mM HEPES and 25 mM NaHCO₃ (Trager and Jensen, 1976) . Cultures were maintained at 37°C in a gas mixture of 5% oxygen, 5% CO₂, and 90% nitrogen.

The in vitro anti-malarial activities of 2,3,4,5,6-pentahydroxyxanthone and other formula XI compounds were measured by the [³H] -ethanolamine incorporation method as described in Elabbadi et al. , 1992, with minor modifications. [³H] -ethanolamine was obtained from American Radiolabeled Chemicals, Inc., St. Louis, MO. Experiments were conducted in 96 well plates in a total volume of 200μ1 at a final red blood cell concentration of 3.3% (v/v). An inicial parasitemia of

0.2 to 0.5% was attained by addition of normal uninfected red cells . Radiolabeled ethanolamine was added after 48 hours of incubation and the exoeriment ή £40 / 8 fi M/dV

-15was terminated after 72 hours by collecting the cells onto glass fiber filters with an automated multiwell harvester.

Stock solutions of the various formula XI 5 compounds were dissolved in DMSO at a concentration of 1 mM and diluted in complete medium (including 10% human serum) to provide 10X stock concentrations in the range of 1 to 10,000 nM. The concentration of the formula XI compound giving 50% inhibition of label incorporation (IC_S0) relative to control (i.e., drug-free) conditions was calculated from the dose-response curve.

ii. Assay foranti-leishmania activity Leishmania donovani was cultivated in

Schneider's medium (Gibco, Grand Island, NY) according.

to the methods described by Grogl et al . (1992) . The in vitro susceptibility of L. donovani to formula XI compounds was determined using the radiolabeled thymidine uptake assay essentially as described by Grogl et al. (1992). Briefly, promastigotes were cultivated at 25°C in Schneiders medium supplemented with 20% inactivated fetal calf serum and lOO^g/mL of gentamicin. Cells were maintained in log phase by seeding at 1 x 10^s/mL with subculturing when cultured densities approached 4 x 10⁷/mL before reaching their maximal density. For the assay, early log phase promastigotes were counted on a hemacytometer and resuspended at a concentration of- 1-2 x 10^s cell/mL in assay media (Schneiders medium plus 10% fetal bovine serum). Tenfold serial dilutions of each test compound were prepared as described above and added to 180 pL of the parasite suspension. After incubation for 24 hours at 25°C, methyl-³H-thymidine was added to each sample for a final concentration of 1-2 p.Ci per well. Each sample was then incubated for an additional 18 hours prior to harvesting. After this incubation time, each sample was asoirated onto a filter mat, washed thoroughly with deionized water, dried and then counted rn a scintillation counter wrth scintillation cocktail.

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-1Siii. Assay for anti-Candida activity The minimum inhibitory concentration (MIC) of formula XI compounds against a clinical isolate of Candida albicans was determined using the following method. As used herein MIC represents the concentration of formula XI compound that completely inhibits growth of Candida albicans over the course of a 15-13 hour incubation period. The determination of this concentration is made by visual inspection; there is no 10 visible growth in a tube containing the MIC of the formula XI compound whereas visible growth is present in tubes containing sub-MIC concentrations of the compound.

Candida albicans was grown to midlog-phase in Luria-Bercani broth (10 grams Bacto-oryptone, 5 grams

Bacto-yeast extract and 10 grams NaCl per liter) and then inoculated into sterile test tubes containing LB broth to an initial density of 10³/ml. The formula XI compound to be tested is dissolved in dimethylsulfoxide (DMSO) at a concentration of lOmM and added to each tube at serial dilutions (ΙμΜ, 10μΜ, 25μΜ, 50μΜ, ΙΟΟμΜ and ΟμΜ) ., The tubes are incubated at 35°C for 15-13 hours and then visually inspected.

/ 8 6 ItVdV

3. Heme Assays

i. In Vitro Kerne Polymerization Assay

Heme polymerization was carried out in 0.02 M phosphate buffer, pH 5.2 at 37°C in the absence of proteins. A 10 mM stock solution of hemin chloride in 0.1 M NaOH was prepared freshly and incubated at 37°C for at least 1 hour to effect complete dissolution.

Xanthones were dissolved in dimethylformamide at 10 mM and diluted into 10 ml of pre-warmed phosphate solution to a final concentration of 25 μΜ . Polymerization was initiated by addition of 25 μΐ of the hemin stock solution to the test samole to yield a final μΐ of dimethylformamide After 7, 30, SO, 120 3 7°C, a 1 ml aliquot was oendorf cube, and concentration of 25 μΜ heme, was added to the control sample. and 210 minutes of incubation at withdrawn, cransferred moo an Ξ

AP 00954

-17centrifuged at 14000g for 2 minutes at room temperature to pellet the precipitate. The soluble fraction was then transferred to a semi-microcuvette (polymethylacrylate, VWR), and its absorption was 5 measured at 360 nm against a blank of the test compound in buffer. Control experiments indicated that (I) the pH of the phosphate solution did not change upon addition of the reagents or during the polymerization process, and (ii) the amount of dimethylformamide used in this assay did not significantly affect the rate of polymerization. To estimate the effect of test compounds on heme polymerization at a given time of incubation, the percentage of soluble hemin remaining in the sample was calculated using the following formula:

% sol. hemin = [A_{(drug+hejnia)t} - A_(drug)c]/ [A_{(henin) t-0}J x 100% where A,_h is the absorption (3 60 nm) of the soluble fraction in the drug-hemin sample after various times of incubation; A_(d__ug)e is the absorption of the drug alone; and A_(hemia)c__Q is the absorption of the hemin control sample (25 μΜ) measured immediately upon addition of the hemin stock solution.

The dose-dependent inhibition of heme polymerization was evaluated as described above except the concentration of each drug was varied in the range of. 0 to 1 mM. The reactions were allowed to proceed for 2 hours in a 37°C waterbath. After incubation, the polymer was pelleted as described above and the absorption (360 nm) of each soluble fraction was measured against a blank containing the drug alone in buffer. The IC_S0 values were determined by nonlinear regression analysis of the dose-response curves of percent inhibition of heme polymerization vs . drug concentration.

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-183. Production of 2,3,4,5,6-oentahvdroxvxanchone inoarasitized ervthrocvtes treated with ruficrallol and exifone

As disclosed in Winter et al. (1996) , rufigallol (1,2,3,5,6,7,-hexahydroxy-9,10-anthraquinone) is a potent anti-parasitic agent and, when rufigallol is combined with exifone (2,3,3',4,4',5'hexahvdroxybenzophenone), a synergistic effect is observed. The synergy between rufigallol and exifone is noted to produce about a 350-fcld increase in potency against malaria Plasmodium parasites.

One aspect of the present invention is the discovery that rufigallol and exifone interact in the parasitized erythrocyte to yield 2,3,4,5,615 pentahydroxyxanthone, and that this compound is a potent anti-malarial agent. Fig. 1 shows a possible mechanism by which 2,3,4,5,6-pentahydroxyxanthone could be produced when rufigallol and exifone are present in a parasitized erythrocyte. Basically, rufigallol is proposed to enter the parasitized erythrocyte, leading to the formation of hydrogen peroxide in a manner similar to the well-documented redox cycling behavior of hydroxynaphthoquinones. In the presence of large quantities of adventitious iron or iron chelates, such as heme, (liberated as a result of the Plasmodium parasite digesting hemoglobin, Atamna and Ginsburg,

1993), hydrogen peroxide is readily decomposed to hydroxyl radicals (Goldstein et al., 1993; Aust et al. , 1985). These highly reactive radicals are proposed to attack exifone and transform the diphenyl compound into

2,3,4,5,6-pentahydroxyxanthone.

As reported in U.S. application serial No. 08/520,694, the anti-malarial activity of exifone can be potentiated by a very wide range of oxidant agents, including ascorbic acid, artemisinin and doxorubicin. This observation is consistent with the mechanism proposed above. The production of 2,3,4,5,5pentahydroxvxanthone in the proposed reaction scheme was confirmed by incubating exifone with ascorbic acid in

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0 9 5 4

-19the presence of iron salt and oxygen in a buffered solution at 37-40°C (the Udenfriend system, Brodie et al., 1954; Maisant et al., 1983 ; Udenfriend et al. , 1954). Samples were removed from the reaction at various time points, lyophilized and extracted with acetone. The solubilized products were then methylated by addition of excess potassium carbonate and dimethvlsulfate in acetone and analyzed by gas chromatography-mass spectrometry. A peak corresponding to the methoxy derivative of 2,3,4,5,5pentahydroxyxanthone was detected.

4. Synthesis and anti-microbial activity of

2,3,4,5,6-pentahydroxvxanthone

The formula XI compound 2,3,4,5,6pentahydroxyxanthone is produced using the following method .

A mixture of 1,2,3-Trimethoxybenzene (1.48g) and

2-hydroxy-3,4,5-trimethoxybenzoic acid (2.00g) is stirred in 40ml of -9¾ solution of P₂O₅ in methanesulfonic acid at room temperature in a stoppered flask for 4 hours. The 2-hydroxy-3,4,5 trimethoxybenzoic acid was obtained by the method of

Mayer and Fikentscher (Mayer and Fikentscher (1956)

Chem. Ber. 89:511) from 3,4,5 -trimethoxybenzoic acid by bromination and then copper-catalyzed replacement of bromine (by OH) of 2-bromo-3,4,5-trimethoxybenzoic acid. The resultant orange mixture is poured onto crushed ice (500ml) producing an unfilterable gummy precipitate.

This crude product is then subjected to base-catalyzed ring closure by heating in a beaker in 100ml of 40% ethanol and 10ml of ION NaOH just below boiling point.

As the mixture reaches 80°C, a white flocculent product appears. The temperature is maintained just below the boiling point and the volume is kept constant by addition of water. After 5 hours, the supernatant, is bright yellow and a mass of the precipitate has formed. Heacing is continued for 4 more hours. Cooling,

AP/P/ 9 8/ 0 1 3 47

AP 00954

-20faltering (by suction) and washing with water afforded 1.37g of analytically pure 2,3,4,5,6pentamethoxyxanthone (yield approximately 45% relative to benzoic acid) . This base - catalyzed ring closure is illustrated below;

2,3,4,5,6-pentahydroxyxanthone is then obtained by boron tribromide treatment (200 ml of a 0.8 M solution in CH₂C1₂) as the pentamethyl ether (0.45 c) is stirred at room temperature for 24 hours. After this period, the solution is poured into 100 ml of water and stirred for approximately 45 minutes before the precipitate is collected by centrifugation. The supernatant is then decanted, the precipitate is shaken with water and centrifuged again. The final product is obtained by freeze-drying of the wet precipitate to produce an orange powder (0.290g, 81%).

The anti-malarial activity of 2,3,4,5,6pentahydroxyxanthone was determined by the method described above. The IC_5Q was determined to be 0.4-0.5 .20 μΜ. Chloroquine, a standard anti-malarial agent has an IC_S0 in this assay system of approximately 0.02 μΜ.

The anti-leishmanial activity of 2,3,4,5,6pentahydroxyxanthone was determined by the method described above. The IC₅₀ was determined to be approximately 5 μΜ or 0.001 mg/ml. Mangostin, a naturally occurring xanthone, exhibited an IC₅₀ of 1 μΜ (or 0.00041 mg/ml) in this same system. Grog! et al. (1992) report that two commonly used and-leishmanial drugs, Pentostam and Glucandne, have IC_S0 values in the range of approximately 0.1 - 2 mg/ml.

The MIC of 2,3,4,5,6-pentahydroxyxanthone against Candida albicans, determined usinc the method

AP/P/ 9 8 / 0 1 3 47

AP 00954

-21described above was found to be approximately 37.5 pM. This corresponds to an IC_S0 of approximately 10 pg/ml.

5. Synthesis and anti-microbial activity of

2,3,4,5,6-oentaacetoxvxanthone

Although 2,3,4,5, 6-pentahydroxyxanthone was found to have potent anti-malarial activity, the inventors postulated that the highly acidic nature of the 3 and 6 hydroxy groups of this compound (i.e. the R₃ and R_s positions as shown in formula XI) could lead these groups to be highly ionized at physiological pH values . Such ionization would likely reduce the rate at which the compound could cross biological membranes, thereby lowering the uptake of the compound into parasitized erythrocytes. Accordingly, two derivatives of

2.3.4.5.6- pentahydroxyxanthone were produced which were expected to be more stable and uncharged above neutral, pH: a pentacetoxy (i.e. esterified) derivative,

2.3.4.5.6- pentaacetoxvxanthone, as well as a methoxy (i.e. methyl ether) derivative, 2,3,4,5,6pentamethoxyxanthone. The activity of these two derivatives against P. falciparum was measured.

As shown in Table 1, the addition of the ether (methoxy) groups essentially eliminated the antimalarial activity of the compound, resulting in an IC_S0 of >100 pM . This reduction in activity is believed to be attributable to the extreme stability of the methoxy groups; the methoxy group is less amenable to enzymatic cleavage under physiological conditions.

The pentaacetoxy derivative was produced by heating 2,3,4,5,6,-pentahydroxyxanthone in acetic anhydride in the presence of a catalytic amount of sulfuric acid, followed by recrystallization. In contrast to the methoxy derivative, the esterified 2,3,4,5,6,-pentaacetoxyxanthone was several times more potent than 2,3,4,5 , 6-pentahydroxyxanthone (exhibiting an IC₅₀ of approximately 0.075 pM). The enhanced activity of the esterified compound is postulated to be due to the ability of the compound to cross membranes

AP/P/ 9 8/013 47 λ -ί '

ΑΡ 00954 (due to its neutral charge at physiological pH) . Esters are also known to be amenable to enzymatic cleavage under physiological conditions. Accordingly, it is expected that the pentaacetoxyxar.thone enters the cell wnere ,s enzvmaticallv cleaved to oroduci

Dentahvdroxvxanthone

Svnthesis and anti-microbial .IVltV Oi

2.3,4.5,6.7,-hexahvdroxvxanthone

The newly discovered anti-malarial activity of

2,3,4,5,6-pentahvdroxyxanthone prompted the investigation of other xanthones and related compounds. One such related compound was 2,3,4,5,6,7,hexahydroxyxanthone which was prepared using the following method:

2-hydroxy-3,4,5-trimethoxybenzoic acid (1.14g, 0.005 mol) and 1,2,3,4-tetramethoxybenzene (0.99g, 0.005 mol) and 25 ml of a 9% solution of P₂O₃ iu methanesulfonic acid were shaken in a 50ml cylindrical 20 glass tube with a Teflon-lined screw-cap at room temperature for 54 hours. The dark orange mixture was then poured onto crushed ice (150 ml). After melting, the product was extracted with methylene chloride (3 x 40 ml). After removal of the solvent, the residue ’ was chromatographed on silica gel (30 g) with CH₂C1₂. Of the three fractions obtained (the eluent was monitored by thin-layer chromatography), the middle one was uniform and left pure 2-hydroxy-, 3,4,5,2',3', 4',5'heptamethoxybenzophenone (0.51 g, 25%) as a yellow oil upon evaporation of the solvent. This was dissolved in 100 ml 75% alcohol whereafter 5 ml of 10N NaOH were added and the mixture was heated to boiling in a beaker for three hours; the volume was kept at 100 ml by occasional addition of water. The mixture was then transferred to a 250 ml round bottom flask and refluxed for another 17 hours. After cooling, suction filtration yielded 0.36 g of 2,3,4,5,6,7-hexamethoxyxanthone as a white oroduct (small needles, matted, 77%). In a

AP/P/ 9 8/013*7

AP 00954

-2310 deprotection procedure, similar to the one described above for pentamethoxyxanthone, 0.42 g of the hexamethoxyxanthone produced 0.296 g cf hexahydroxyxanthone (91%) as a pale yellow powder. It was found advantageous to circumvent the need for centrifugation by stirring the methylene chloride-water mixture (from the quenching of the BBr₃ - solution) in a wide-mouthed container for several hours, leading to the evaporation of the methylene chloride,· the mixture is then easily filterable.

The antimalarial activity of 2,3,4,5,6,7hexahydroxyxanthone was determined by the method described above. The IC_S0 was determined to be 0.075 μΜ. The IC_S0 of this compound against Leishmania was determined to be approximately 5 μΜ. The MIC of the compound against Candida albicans was determined to be approximately 37.5 μΜ, corresponding to an IC_S0 of approximately 10 pg/ml.

7. Scope of formula XI compounds

The inventors have discovered that a wide range of compounds related to 2,3,4,5,6-pentahydroxyxanthone have anti-microbial activity. These compounds can be represented by the formula XI shown below.

AP/P/ 9 8 / 0 1 3 4,7

wherein :

A is oxygen, substituted antimony (stibium), sulfur or N-R' wherein R' is H, OH, alkyl, haloalkyl, aryl or haloaryl; and

R_t-R_e are independently selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkylamine, alkylthio and

AP 00954

-24haloakyi), amino, ester and nitro groups and O-linked and C-linked carbohydrates.

The activities of various formula XI compounds the Plasmodium falciparum parasite are shown in The activities of various formula XI compound; Leishmania donovani are shown In Table 2. For comparison, Table 2 also shows the activity of stibogluconate, a standard anti-leishmanial. Other examples of specific formula XI compounds are illustrated below:

against Table 1 against

O

II

OH OH

2,3,4,5,6-pentahydroxythioxanthona

2,3,4,5,6-pentaacs;oxythioxanthone

O

OH OH

2,3,4,5,6-pentahydroxyacridone

AP/P/ 9 8/013 V

O

OAc OAc

2,3,4,5,6,7-hexaacetoxyxanthone

O

2,3,4,5,6,7-hexahydroxythioxanthons

O

II

OAc OAc

2,3,4,5,6,7-hexaacatoxythioxanttione

0 II
I il I	/^Y°Ac
AcO^	ΎΥ OAc	'^Y^OAc OAc
2,3,4,5,6,7-hexaacstoxyacridone

AP 00954

-2510

Ο

II

2,3,4,5,6,7-hexahydroxyacridone

II

OH OH

AP/P/ 9 8 / 0 1 3 V

2,4,5-trihydroxy-3,6-acetoxyxanthone i

rr. 0 0 9 5 4

-26Table 1

Compound Name	Xanthone Structure	ICjo, μΜ vs. Plasmodium
Xanthone		0		> 10
		II
	ΓΊί
		O'
Mangostin				5
T	o	1 OH
	ΟΗ,Ο^Χ
	I J HO'''*'5^	o'	1^OH
Mangiferin				50
	0	OH	HO
	1 n I	J	'0——r-Λ—OH
		Όη )
			HO
3,4,5,6,- Tetrahdroxy-		o 11		10
xanthone		c„
	I II		ii Ί
		o'^Y^OH
	HO		0H
2,3,4,5,6- Pentahydroxy-		0 II		0.4 to 0.5
xanthone	ΎΊ	/C.	γγ
	HO^<	o'	Y^OH
	HO		OH
2,3,4,5,6,7- hexahydroxy-		0 II		0.075
xanthone			nr
	HO^Y^	o'	Y^OH
	OH		OH
2,3,4,5,6- Pentamethoxy-	CH.O	0 il 0		> 100
xanthone	1		o
			Y^och3
	CHjO	och3

AP/P/ 9 8/013 47

AP 00954

Compound Name	Xanthone Structure	IC30, μΜ vs. Plasmodium
2,3,4,5,6-Penta- acetoxyxanthone	AcO^	T ii	o II ,c.	Y	A	0.075
	ΑσΖ	• I AcO	Ό'	A	Ύ^ΟΑο OAc
1,2,3,5,6,7- Hexahydroxy- xanthone	HO		0 H,	Ύ	OH AyOH	25-50
	HO^	Ύ1 HO	Ό'	A	'^A^-qh
1,3- d ihy droxy xanthone		OH Λ		o		> 100μΜ
	HO		L	O'
1,3,5,6,7- pentahydroxy- xanthone		OH Λ	0 A	A		ΙμΜ
	HO^		'0'	A	'γΑ'ΌΗ OH

ΑΡ/Γ/ 9 8/0 1 3 41

AP 00954

-28Table 2

Compound	ICi0, mg/ml vs. Leishmania
0 HO O'YOH HO OH 2,3,4,5,6-Pcntahydroxyxantnor.s “X5”
0.0015
0 ho^^c^^oh ΗΟ^γθ^Ι 0H HO OH 7,3,4,5,6,7-hcxahydroxyxanthone “X6”	0.0015
1 θ ?H I ch3c\A.YaY Υϊ n ΗΟ/^χΛΟ>^/χΟΗ Mangostin	0.00041
0 OH HO ho’ go θ OH Mangiferin	>0.05
Γ CH2OH φΗ2ΟΗ (~HOH pHOH H-c-ο^φΗ φ-χο-ς-Η (+- C-O-Sb-O-SbmO · ς- H H-C-OZ 0-9-H QOQ· COO Na3 -SH,0 Sodium Antimonyl (V) Gluconate 'Stibogluconate' Stibogluconate	0.1 to 1.0*

“taken from literature values

AP/P/ 9 8 / 0 1 3 4,7

AP 00954

-298 - Sources of formula XI compounds and preferred method of synthesis

Many xanthones and xanthone derivatives can be 5 purchased commercially from sources including: ICN

Biomedicals, Irvine, California, U.S.A.; Sigma Chemical Company, St. Louis, Missouri, U.S.A.,· Aldrich Chemical Company, Milwaukee, Wisconisin, U.S.A.; and Janssen Chimica (Belgium). In addition, many xanthones are naturally occurring compounds which can be purified by methods such as those described in Hostettmann et al. (1995).

A. General method of xanthone synthesis Xanthones according to the present invention may 15 be synthesized by the general method described above, for the synthesis of 2,3,4,5,6,7 -hexahydroxyxanthone and 2,3,4,5,6-pentahydroxyxanthone. Essentially, this method comprises subjecting an o-hydroxy-o'-methoxybenzophenone to base treatment (e.g., aqueous sodium 20 hydroxide), which leads to the formation of the central oxygen-bridged ring; the o-phenoxide (from the ohydroxyl in basic medium) then replaces the methoxide on the other ring by nucleophilic substitution. The net effect is expulsion of CH-,Ο^-, and the formation of a 25 diphenyl ether. Since the two phenyl rings are already linked by a carbonyl group, a xanthone is obtained. The o-OH, o'-OCH-j groupings are required for this reaction; although the methyl could be replaced with other groups, this is not likely to be of any advantage since methyl 30 ethers are readily available. However, other substituents can be present in the two aromatic rings of the benzophenones. For example, for the synthesis of the penta- and hexa-hydroxyxanthones described above, these other substituents were methoxy groups.

The benzophenones used in synthesizing the xanthones as described above may be obtained by combining substituted benzoic acids and methoxybenzenes by a condensation or ocher coupling procedure. In an

Li £4 0 / 8 6 /d/dV

AP 00954

-30exemplary condensation procedure, the benzoic acid carries an o-hydroxy group:

This coupling can be achieved by condensation in polypnosphoric acid or a mixture of phosphorus pentoxide and methanesulfonic acid. Alternatively, benzophenones may be synthesized by Friedel-Crafts acylation (of a benzoyl chloride and a polymethoxybenzene), or by the Hoesch synthesis, or by reaction of a benzoyl chloride with an appropriately metalated (e.g., lithiated) aromatic .

In particular cases, additional substituents may be introduced into the benzophenone after the benzophenone has been synthesized.

Alternatively, xanthones may be derived from benzophenones by oxidative cyclization. This method essentially requires an o-hydroxy group on one ring and a free position (occupied by H) on the other ring. Oxidation (e.g., with K₃[Fe(CN)_s], or KPInOj produces an oxygen bridge with the elimination of 2H.

AP/P/ 9 8 / 0 1 3 4,7 •20 o o

0¼ — ©00 OH O . Synthesis of Thioxanthones Thioxanthones may be obtained by a number of methods. Exemplary syntheses include: (1) combining an o-mercaptobenzoic acid with a halobenzene (preferably iodo or bromo); and (2) combining an o-halobenzoic acid (preferably either bromo or iodo) with a mercaotobenzene. The intermediate diohenylsulfide

Droduced in each case is then condensed to vield the

AP 00954

-31recruired thioxanthone as illustrated in the following schematic :

Methods of synthesizing thioxanthones using this general reaction scheme are described in HollisShowalter et al., J. Med. Chem. 31, 1527 (1988) .

C. Synthesis of Acridones

Acridones may be synthesized by a number of different methods. The following methods are exemplary and are well known in the art'.

Acridones may be formed from o-nitrobenzophenones, which are reduced to obtain o-aminobenzophenones which are in turn cyclized with either o'-methoxy or o'-hydroxy groups to produce the acridones. The o-nitrobenzophenones which are used as starting materials may be obtained either by FriedelCrafts acylation of phenols or methoxybenzenes using o-nitrobenzoylchlorides, or by direct nitration of benzophenones, or by coupling of lithiated arenes with o-nitrobenzol chlorides (e.g., as described by Parkham et al., Journal of Organic Chemistry 46, 1057 (1981).

An exemplary synthesis is illustrated below:

AP/P/ 98/013 4 7

AP 00954

-32Alternatively, o-nitrobenzophenones may be formed by coupling of 2-methyl-3 , l-benzoxazin-4-ones (from o-aminobenzoic acid by heating with acetic anhydride) with aromatic Grignard reagents (e.g., -Adams et al.

J.C.S. Perkin Trans I 2099 (1976)).

Alternatively, acridones may be produced by zinc chloride catalyzed condensation of hydroxyanthranilic acids and polyhydroxybenzenes (such as described by Bahar et al., Phytochemistry 21, 2729 (1982)) and illustrated in the following scheme:

Acridones may also be formed by cycloaddition of derivatives of anthranilic acids with dehydrobenzenes such as described by Khanapure et al., Tetrahedron

Letters 31 : 2869 (1990) .

h₃co h₃co och₃

+ c₂h₅ou

AP/P/ 9 8/01347

D. Deorotection

Deprotection of polymethoxyxanthones, polymethyoxythioxanthones or polymethoxyacridones may be achieved in a number of ways, including treating with either hydriodic acid or with a methylene chloride solution of boron tribromide, and hydrolysis ot the intermediate boron-phenoxy compound.

AF 00954

-33 9. Activity of formula XI compounds

The formula XI compounds according to the present invention are useful in inhibiting the growth of microbial pathogens, including protozoan parasites (for example, Plasmodium sp . and Leishmania sp.) and yeast (for example, Candida albicans) . Thus, one aspect of the present invention is a method of inhibiting the growth of a protozoan parasite by contacting the parasite with a formula XI compound. In this context, it is, of course, necessary to contact the parasite with a sufficient amount of the formula XI compound to inhibit growth thereof .

One skilled in the art will readily appreciate that the amount of compound sufficient to inhibit the growth of a microbial pathogen will vary according to the formula XI compounds selected, the target microbial pathogen and the environment in which the microbial pathogen is growing. Standard methods are available for determining the IC_S0 concentration of formula XI compounds for microbial pathogens in vitro.

Alternatively, ED_S0 values may be determined in an animal. See Munson, Principles of Pharmacology (Chapman and Hall, 1995) Chapter 1. Exemplary 1C_SQ values (showing activities against Plasmodium and Leishmania, respectively) are presented in Tables 1 and 2. These values relate 'to the inhibition of a microbial pathogen grown in vitro. Contacting the microbial pathogen with a compound according to formula XI may also be performed in vivo where necessary to inhibit the growth of microbial pathogens under physiological conditions. Section 11 below (Pharmaceutical Compositions) addresses compositions and dosages appropriate for inhibiting the growth of microbial pathogens in such circumstances .

5 10 . Hems Polymerization and Formula XH Compounds

Certain parasites, including Plasmodium spp. and

Schistosoma spp., obtain amino acids for growth by degrading hemoglobin from che red blocd cells of the

AP/P/ 9 8 / 0 1 3 V

AP 00954

-34 infected host. In the case of the malarial parasite, degradation of hemoglobin takes place in the parasite's digestive vacuole, which is an acidic proteolytic compartment essential to the metabolism of the parasite (see Fig. 2). As the hemoglobin is broken down, free toxic heme is released. To prevent the build-up of toxic heme, the parasites polymerize the heme for storage in a non-toxic form called hemczoin.

While the formula XI compounds of the present 10 invention exhibit anti-microbial activity against a range of pathogens, it has now been discovered that a certain sub-group of these compounds form complexes with free heme, which results in the inhibition of heme polymerization. In turn, this leads to the accumulation of toxic heme in the parasite's digestive vacuole and ultimately to the death of the parasite. These compounds, include X5 (A=O) and X6 (A=O) and belong to a group related to formula XI compounds which are referred to herein as formula XH compounds . Formula HX compounds may be particularly effective against those parasites, including Plasmodium and. Schistosoma, which rely on hemoglobin catabolism to survive in the infected host or must rely on the host's heme iron reserves for synthesis of critical ferroproteins.

.25 Table 3 below shows the ability of a range of formula XI compounds to inhibit heme polymerization, as determined using the simple in vitro heme polymerization assay described above. Under the conditions of this assay, heme polymerization was found to be pH dependent (polymerization required a pH of between 4.5 and 5.5).

Polymerization occurred spontaneously and was more than 95% complete within 2 hours of commencement of incubation with the compound X5 (A=O)(see Fig. 3).

The ±C_sa values shown in Table 3 are the average of at lease two independent determinations of full doseresponse curves. Xanthone and the teseed monohydroxyxanthones did not exhibit any inhibitory activity in this assav. Moderate inhibitory activity

AP/P/ 98/01347

AP 00954

-35(i.e., IC_S0 8-20 μΜ) was observed for the compounds bearing a single hydroxy group at either 4- or 5position, whereas the greatest activity was observed for xanthones containing hydroxy groups at both positions.

For example, 2,3,4 -trihydroxyxanthone exhibited an IC_S0 of 16.5 μΜ, while 2,3,4,5,□-pentahydroxyxanthone (X5, A=O) yielded a value of 1.2 μΜ. Consistent with this structure-activity profile., the 4,5-hydroxylated xanthones also exhibited the most pronounced in vitro antimalarial activity. Furthermore, pentamethoxy-X5'and pentaacetyl-X5 were inactive in this assay, though the latter was shown to be a potent antimalarial agent. Presumably, pentaacetyl-X5 is hydrolysable in infected red blood cells by a non-specific esterase, whereas pentamethoxy-X5 is not .

AP/P/ 9 θ / 0 1 3 V

AP 00954

AP/P/ 9 8/01347

SUBSTITUTE SHEET (RULE 25)

AP 00954

-37These findings suggest that X5 (A=O) and other compounds shown in Table 3 form soluble complexes with heme monomers or oligomers and interfere with hemozoin formation. Such action may result in the death of the parasite by one of several mechanisms, including preventing detoxification of free heme, starving the parasite for iron, or increasing the osmotic pressure within the parasite digestive vacuole. The relative abilities of these compounds to inhibit in vitro heme polymerization are in good correlation with their in vitro antimalarial activities, and are indicative of the following structure-activity relationships: (I) in general, a higher degree of hydroxylation is favored for the inhibitory activity,· and (ii) hydroxylation at 4and 5-positions appears to be central to full activity. Based on these observations, a model for the interaction of these compounds is presented in Fig. 4. This model shows the interaction of X6 (A=O) with heme and serves to illustrate the following interactions: (1) between the heme iron and the carbonyl oxygen; (2) between the two planar aromatic systems; and (3) between the carboxylate side groups of the heme and the 4- and 5position hydroxyls of the xanthone. These interactions may take any form of known chemical interaction, including covalent bonding, hydrogen bonding, ionic bonding, and polar and nonpolar bonding. Moreover, this model predicts that chemical modifications at the 4and/or 5-positions which improve association with the heme carboxylate groups will result in even greater antimalarial activity.

Accordingly, Formula XH compounds can be defined as compounds which inhibit heme polymerization and which have the following structure:

X - Y - z wherein X is a group capable of interacting with the iron atom in heme;

AP/P/ 9 8 / 0 1 3 47

AP 00954

-38Y is a planar aromatic system capable of interacting with the porphyrin ring of heme through overlapping pi-pi orbitals; and

Z represents one or more grouts capable of 5 interacting with at least one carbox/Iate side group of heme .

In preferred embodiments, a formula XH compound has the following structure:

wherein:

A is oxygen, substituted antimony (stibium), sulfur or N-R' wherein R' is H, OH, alkyl, haloalkyi, preferably lower alkyl or lower haloalkyi wherein lower means 10 or fewer carbon atoms, aryl or haloaryl;

R_l-R₃ and R_g-R_a are independently selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyl), amino, ester and nitro groups and O-linked and C-linked carbohydrates;

at least one of the R₄ and R_s substituent pair is selected from the group consisting of amino, substituted amino, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamidinium, guanidinium, alkylguanidinium, hydroxy, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxyhydroxy groups, COOH, alkyl-COOK, CONH, and alkyl-CONH₂; and the other member of the R₄ and R_s substituent pair is selected from the group consisting of H, OH, halogen, aryl, arylamine, alkyl, substituted alkyl (such as alkoxy, alkylamine, alkylthio and haloakyl), amino, substituted amino, ester and nitro groups, O-lrnked and

AP/P/ 9 8 / 0 1 3 47

AP 00954

-39C-linked carbohydrates, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamidinium, guanidinium, alkylguanidinium, alkvlhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxyhydroxy groups, COOH, alkyl-COOK, CONH-, and alkylCONH, .

Preferably, both R₄ and R_s are selected from the group consisting of amino, substituted amino, alkylamino, substituted alkyl amino, arylamino, amidinium, alkylamidinium, guanidinium, alkylguanidinium, hydroxy, alkylhydroxy, alkoxyhydroxy, alkoxyamine, alkoxy-substituted amine, azido, carboxylic esters of hydroxy, alkylhydroxy and alkoxyhydroxy groups, COOH, alkyl-COOH, CONH₂and alkyl-CONH₂.

Examples of formula XH compounds include: 4,5dihydroxyxanthone , , 2,3,4 -trihydroxyxanthone, 3,4,5,6tetrahydroxyxanthone, 2,3,4,5,6-pentahydroxyxanthone, 1,3,5,6,7-pentahydroxyxanthone, 2,3,4,5,6,720 hexahydroxyxanthone. Methods of synthesizing these compounds are known in the art and are described in a representative manner above in relation to formula XI compounds (it will be appreciated that there is significant overlap between formula XI and formula XH compounds).

Based on the mechanism proposed for the interaction of formula XH compounds with heme, the formula XH compound 4,5-bis- ( (/3diethylamino)ethoxy)xanthone (45-DEA-X) is anticipated 30 to be particularly effective in complexing with heme.

4,5-DEAE-X, illustrated in Fig. 5, is a diprotic base which upon entry into the acidic vacuole becomes positively charged, effectively trapprng tne drug within this compartment where it will complex with heme.

The positively charged residues are arranged to be in opposition to the heme carboxylate side chains so as to facilitate formation of a soluble heme:xanthone complex (the ionic nature of the trapped xanthone will also

AP/P/ 9 8 / 0 1 3 V

AP 00954

-40maintain, the drug: heme complex in solution) .

4,5-DEAE-X may be readily prepared from 4,5-dihydroxyxanthone (which as described above, is synthesized by basecatalyzed cyclization of the appropriate ortho-hvdroxymethoxvlated-benzophenone). To produce 4,5-DEAE-X,

4,5-Di-hydroxyxanthone is then reacted under basic conditions with ethylene dibromide to yield 4,5-bis-(/3bromoethoxy)-xanthone. The latter is then reacted with diethylamine to yield the desired product. The shorter dimethylaminomethoxy derivative is also easily available from 4, 5-dihydroxyxanthone through reaction with Eschenmoser's salt.

Formula XH compounds inhibit heme polymerization growth of those pathogens such as Plasmodium. It is formula XH heme-complexing compounds may be used to treat infections caused by pathogens which require access to the host heme iron reserves for survival.

can be used to and to inhibit the which polymerize heme, also apparent that the

11. Pharmaceutical compositions

Formula XI and XH compounds having antimicrobial activity are administered to patients in conventional dosage forms prepared by combining an appropriate dose of the compound with standard pharmaceutical carriers . Suitable pharmaceutical carriers may be, for example, solids or liquids. Suitable solid carriers include lactose, magnesium stearate, terra alba, sucrose, talc, stearic acid, gelatin, agar, pectin, acacia and cocoa butter. The amount of solid carrier will vary widely depending on which carrier is selected, but oreferably will be from about 25mg to about Ig. Suitable liquid carriers include syrup, peanut oil, olive oil, sesame oil, propylene glycol, polyethylene glycol and water. The carrier or diluent may also include tins delay material well known to the art such as, for example, glyceryl,

AP/P/ 9 8 / 0 1 3 4.7

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-41monoscearate or glycerol distearate, either alone or with a wax. The foregoing examples of suitable pharmaceutical carriers are only exemplary and one of skill in the art will recognize that a very wide range of such carriers may be employed.

The formulation of the formula XI and XH compounds with a pharmaceutical carrier can take many forms. For example, the formulation may be a tablet, capsule, powder, suppository, lozenge, syrup, emulsion, liquid suspension or solution, or sterile injectable liquid. The pharmaceutical compositions are prepared by conventional techniques involving procedures such as mixing, granulating and compressing, and dissolving the ingredients. As will be appreciated from the foregoing exemplary formulations, administration of the compounds can be by any known route, including oral administration, intramuscular and intravascular inj action .

The methods of treating a patient suffering from a microbial disease, such as malaria, in accordance with this invention comprise administering to the patient a therapeutically effective amount of a compound according to formula XI or formula XH. Preferably, the patient will be administered the compound in a formulation as described above (i.e. in combination with a pharmaceutical carrier), the formulation having a therapeutically effective amount of the compound.

As used herein, a therapeutically effective amount is preferably an amount that results in complete remission of the disease. However, it recognized that any improvement in the condition is clinically advantageous. therapeutically effective amount also amounts of the administered compound that result m partial remission of the disease or which slow or limit the further progression of the disease, or which inhibit the growth of the infectious agent or wnich reduce the clinical sicns and svmotoms or the disease (tor examoie, will be patient's Hence, a encomoasses

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-42 fever and chills in a malaria infection). It is anticipated that therapeutically effective dosages which slow or limit the spread of the disease, or which inhibit the growth of the parasite will be particularly suitable for combination with other anti-microbial drugs .

The compounds of the invention can be administered in a daily dosage schedule of from about 10 mg to about 10 g. One skilled in the art will recognize that in determining the active amount of the anti-microbial compound co be administered, the activity of the specific compound selection, the age, weight and condition of the patienc and the administration of other drugs to the patient must be considered.

The formula XI and XH compounds may also be indirectly provided to patients in pro-drug formulations,. For example, formula XI and XH xanthones may be produced by co-administration of an oxidant agent with a corresponding substituted benzophenone under physiological conditions. A pro-drug is thus defined herein as a compound which reacts under physiological conditions to produce a formula XI or XH compound.

Thus, the pro-drug for 4,5-DEAE-X would be 3,3 '-bis - (/3diethylamino)ethoxy-2-hydroxy-benzophenone , and the pro25 drug for 2,3,4,5,6-pentahydroxyxanthone would be

2,3,3 ' ,4,4' ,5'-hexahydroxybenzophenone (exifone). The provision of the XI and XH compounds in pro-drug form (i.e. the corresponding benzophenones) may be particularly useful where the oxidant agent which is administered with the pro-drug is another anti-microbial agent. For example, the widely used anti-malarial agent primaquine is such an oxidant agent, and the combination of an XH pro-drug with primaquine is expected to be a particularly efficacious treatment for malaria.

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-43REFERENCSS

Atamna, H., and H. Ginsburg (1993), Origin of reactive oxygen species in erythrocytes infected with Plasmodium falciparum [published erratum appears in Mol . Biochem. Parasitol. (1994) 63..-312] , Mol. Biochem.

Parasitol. 61:231-41.

Aust, S., M. LA, and C. Thomas (1985), Role of metals in oxygen radical reactions . Journal of Free Radicals in Biology and Medicine 1.: 3 -25 .

Brodie, 3., J. Axelrod, P. Shore, and S. Udenfriend (1954), Ascorbic acid in aromatic hydroxylation. II. Products formed by reaction of substrates with ascorbic acid, ferrous ion, and oxygen, J. Biological Chemistry 208:741-749 .

Campbell, W. (1986), The chemotherapy of parasitic infections, J. Parasitol. , 72 :45-61.

Cooper et al. (1992) J. of Antibiotics 4 5 :444-453.

Cowman, A.F. and S.J. Foote (1990), Chemotherapy and drug resistance in malaria, Int. J. Parasitol., : 503-13 .

Elabbadi, N., M. Ancelin, and H. Vial (1992), Use of radioactive ethanolamine incorporation into phospholipids to assess in vitro antimalarial activity by the semiautomated microdilution technique. Antimicrob. Agents Chemother. , 3 5:50-55 .

Ghosal et al. (1978) J. Pharm. Sci. 67:721-722.

Goldstein, D., D. Meyerstein, and G. Czapski

AP/P/ 98/01347 (1993), The Fenton Reagents. Medicine 15 :435-445 .

Free Radical Biology and

Grogl, et al. (1992) Am. J. Troo. Med. Hvcr.

47:117-126.

Grover, P. , G. Shah, and R. Shah (1955) , J . 45 Chem. Soc.:3932 and Grover, P., G. Shah, and R. Shah (1956), Xanthones: Part V-A new synthesis of Lichexanthone. 153. J. Sci. Indust. Res. 629-633.

Hambloch and Frahm (1984’ Chim. Ter. 20:71-77.

aU2

Med . Chem. - Heyneman, D.

The Worldwide 3urden of

Parasitic Disease, in Parasitic Infections, J. Leech,

Hostettmann et al . (1995) in Phytochemistry of

Plants Used In Traditional· Medicine, chapter 2, (Hostettmann et al. ed) Oxford Science Publications.

AP 00954

-44M. Sande York. pp and R . 11-32

Root, Eds. Churchill Livingstone

New drug,

Larrey, D. Gastroenterol (1989) , . Clin.

Exifone : a new hepatotoxic Biol . , 13 :33 3 -334 .

Maissant, J., C. Bouchoule, P. Canesson, and M. Blanchard (1983), Hydroxylation des composes aromatiques par le systeme d'Udenfriend: Remplacement de 1'acide ascorbique par une reduction electrochimique, Journal of Molecular Catalysis 18:18 9-192 .

Mayer and Fikentscher (1956) Chem. Ber. 89:511.

Mebrahtu, Y., P. Lawyer, J. Githure, J.B. Were,

R. Muigai, L. Hendricks, J. Leeuwenburg, D. Koech, and C. Roberts (1989), Visceral leishmaniasis unresponsive to pentostam caused by Leishinania tropica in Kenya. Am. J . Troo. Med . Ηνσ., 41:2 8 9 - 94 .

Olliaro and Goldberg (1995) Parasitology Today, 11: 294-297.

Sultanbawa (1980) Tetrahedron 36:1465-1506.

Trager and Jensen (1976) Science 193: 673-675.

Udenfriend, S., C. Clark, J. Axelrod, and B. Brodie (1954), Ascorbic acid in aromatic hydroxylation.

I. A model system for aromatic hydroxylation, J. Biol . Chemistry 208 :731-739 .

Li £ I 0 / 8 6 /d/dV

Vossen, et al. (1993) Lipids 28, 857-861.

Wang and Liu (1994) J. Natural Products

57.: 211-217 .

Winter et al. (1996) Antimicrob. Agents

Chemother. 4 0: 1408-1411.

World Health Organization (1991), United Nations Development Program/WorldBank/WHO Special Programme for Research and Training, in Tropical Diseases. Tropical diseases: progress in research, 1989-1990:29-40.

Claims (15)

1. Use of a compound having a formula

10 wherein A is oxygen, and R₁-R₈ are independently selected from the group consisting of H, OH, aryl, arylamine, alkyl, substituted alkyl, halogen, amino, ester and nitro groups, and O-linked and C-linked carbohydrates, in the manufacture of a preparation for inhibiting the growth of , 15 a protozoan parasite by contacting the protozoan parasite with said preparation.

2 . Use according to claim 1 wherein in the formula R_x and R₈ are H.

3. Use according to claim 1 wherein the step of contacting the parasite with the preparation comprises administering a therapeutically effective dosage of the compound to a patient infected with the parasite.

4. Use according to claim 1 wherein the protozoan parasite is a Plasmodium sp. or a Leishmania sp.

5. Use of a compound selected from the

30 following group: 2,3,4,5,

6-pentahydroxyxanthone;

2,3,4,5,6-pentaacetoxyxanthone; 2,3,4,5,6,7hexahydroxyxanthone; 2,3,4,5,6,7-hexaacetoxyxanthone in the manufacture of a preparation for inhibiting the growth of a protozoan parasite, by contacting the parasite with

35 an amount of said preparation sufficient to inhibit the growth of the parasite.

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-466. Use according to claim 5 wherein the protozoan parasite is selected from the group consisting of: Leishmania donovani, Plasmodium falciparum, Giardia lamblia, Trypanosoma gambiense, Trypanasoma cruzi,

5 Cryptosporidium parvum, Entamoeba histolytica,

Pneumocystis carinii, and Toxoplasmosis gondii.

7 . A substance or composition for use in a method of inhibiting the growth of a protozoan parasite,

10 said substance or composition comprising a compound having a formula

Ft, wherein A is oxygen, and R^pRg are independently selected from the group consisting of H, OH, aryl, arylamine,

20 alkyl, substituted alkyl, halogen, amino, ester and nitro groups, and 0-linked and C-linked carbohydrates; and said method comprising contacting the protozoan parasite with said substance or composition.

25 8 . A substance or composition for use in a method of inhibiting the growth of a protozoan parasite, according to claim 7 wherein in the formula R₁ and R₈ are

H.

30 9. A substance or composition for use in a method of inhibiting the growth of a protozoan parasite, according to claim 7 wherein the step of contacting the parasite with the compound comprises administering a therapeutically effective dosage of the compound to a

35 patient infected with the parasite.

AP/P/ 9 8/013 V

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-4710. A substance or composition for use in a method of inhibiting the growth of a protozoan parasite, according to claim 7 wherein the protozoan parasite is a Plasmodium sp. or a Leishmania sp.

11. A substance or composition for use in a method of inhibiting the growth of a protozoan parasite, said substance or composition comprising a compound selected from the following group: 2,3,4,5,610 pentahydroxyxanthone; 2,3,4,5,6-pentaacetoxyxanthone;

2,3,4,5,6,7-hexahydroxyxanthone; 2,3,4,5,6,7hexaacetoxyxanthone; and said method comprising contacting the parasite with an effective amount of said substance or

15 composition sufficient to inhibit the growth of the parasite .

12 . A substance or composition for use in a method of inhibiting the growth of a protozoan parasite,

20 according to claim 11, wherein the protozoan parasite is selected from the group consisting of: Leishmania donovani, Plasmodium falciparum, Giardia Iambiia, Trypanosoma gambiense, Trypanasoma cruzi, Cryptosporidium parvum, Entamoeba histolytica, Pneumocystis carinii, and

25 Toxoplasmosis gondii.

13 . A non-therapeutic method of inhibiting the growth of a protozoan parasite, the method comprising the steps of :

30 providing an effective amount of a composition comprising a compound having a formula £ V £4 0 / 8 6 /d/dV

AP Ο Ο 9 5 4

-48wherein A is oxygen, and R_x-R_g are independently selected from the group consisting of H, OH, aryl, arylamine, alkyl, substituted alkyl, halogen, amino, ester and nitro groups, and 0-1inked and C-linked carbohydrates; and

5 contacting the protozoan parasite with the compound .

14 . The method of claim 13 wherein in the formula R_x and R₈ are H.

15 . The method of claim 17 wherein the protozoan parasite is a Plasmodium sp. or a Leishmania sp.

16. A non-therapeutic method of inhibiting the

15 growth of a protozoan parasite, the method comprising contacting the parasite with an amount of a compound selected from the following group, the amount sufficient to inhibit the growth of the parasite: 2,3,4,5,6pentahydroxyxanthone; 2,3,4,5,6-pentaacetoxyxanthone;

20 2, 3 ,4, 5, 6 , 7-hexahydroxyxanthone ; 2,3,4,5,6,7hexaacetoxyxanthone.

17. A method according to claim 16 wherein the protozoan parasite is selected from the group consisting

25 of: Leishmania donovani, Plasmodium falciparum, Giardia Iambiia, Trypanosoma gambiense, Trypanasoma cruzi,

Cryptosporidium parvum, Entamoeba histolytica, Pneumocystis carinii, and Toxoplasmosis gondii.