AU2002239679A1 - Rolling circle amplification detection of rna and dna - Google Patents

Rolling circle amplification detection of rna and dna

Info

Publication number
AU2002239679A1
AU2002239679A1 AU2002239679A AU3967902A AU2002239679A1 AU 2002239679 A1 AU2002239679 A1 AU 2002239679A1 AU 2002239679 A AU2002239679 A AU 2002239679A AU 3967902 A AU3967902 A AU 3967902A AU 2002239679 A1 AU2002239679 A1 AU 2002239679A1
Authority
AU
Australia
Prior art keywords
rna
dna
rolling circle
circle amplification
amplification detection
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
AU2002239679A
Inventor
Cristina M. Attix
Allen T. Christian
Melissa S. Pattee
James D. Tucker
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
University of California
Original Assignee
University of California
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University of California filed Critical University of California
Publication of AU2002239679A1 publication Critical patent/AU2002239679A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2002239679A 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna Abandoned AU2002239679A1 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US25721600P 2000-12-20 2000-12-20
US60/257,216 2000-12-20
PCT/US2001/049780 WO2002050310A2 (en) 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna

Publications (1)

Publication Number Publication Date
AU2002239679A1 true AU2002239679A1 (en) 2002-07-01

Family

ID=22975349

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2002239679A Abandoned AU2002239679A1 (en) 2000-12-20 2001-12-18 Rolling circle amplification detection of rna and dna

Country Status (3)

Country Link
US (1) US6783943B2 (en)
AU (1) AU2002239679A1 (en)
WO (1) WO2002050310A2 (en)

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Publication number Priority date Publication date Assignee Title
US7141371B2 (en) * 2002-09-06 2006-11-28 State Of Oregon Acting By And Through The State Board Of Higher Education On Behalf Of The University Of Oregon Methods for detecting and localizing DNA mutations by microarray
US7989166B2 (en) 2005-04-12 2011-08-02 In Situ Rcp A/S Circle probes and their use in the identification of biomolecules
CN101213310A (en) 2005-04-12 2008-07-02 Novia公司名下的现场Rcp公司 Methods for production of oligonucleotides
US7449297B2 (en) 2005-04-14 2008-11-11 Euclid Diagnostics Llc Methods of copying the methylation pattern of DNA during isothermal amplification and microarrays
NZ564095A (en) * 2005-05-10 2009-06-26 Oregon State Methods of mapping polymorphisms and polymorphism microarrays
WO2006138284A2 (en) 2005-06-15 2006-12-28 Callida Genomics, Inc. Nucleic acid analysis by random mixtures of non-overlapping fragments
WO2007133831A2 (en) 2006-02-24 2007-11-22 Callida Genomics, Inc. High throughput genome sequencing on dna arrays
US7960104B2 (en) * 2005-10-07 2011-06-14 Callida Genomics, Inc. Self-assembled single molecule arrays and uses thereof
US20070168197A1 (en) * 2006-01-18 2007-07-19 Nokia Corporation Audio coding
SG10201405158QA (en) * 2006-02-24 2014-10-30 Callida Genomics Inc High throughput genome sequencing on dna arrays
GB0621361D0 (en) * 2006-10-26 2006-12-06 Fermentas Uab Use of DNA polymerases
US7910354B2 (en) 2006-10-27 2011-03-22 Complete Genomics, Inc. Efficient arrays of amplified polynucleotides
US20090111705A1 (en) 2006-11-09 2009-04-30 Complete Genomics, Inc. Selection of dna adaptor orientation by hybrid capture
US20080221832A1 (en) * 2006-11-09 2008-09-11 Complete Genomics, Inc. Methods for computing positional base probabilities using experminentals base value distributions
US8415099B2 (en) * 2007-11-05 2013-04-09 Complete Genomics, Inc. Efficient base determination in sequencing reactions
US8617811B2 (en) 2008-01-28 2013-12-31 Complete Genomics, Inc. Methods and compositions for efficient base calling in sequencing reactions
US8518640B2 (en) * 2007-10-29 2013-08-27 Complete Genomics, Inc. Nucleic acid sequencing and process
US8298768B2 (en) * 2007-11-29 2012-10-30 Complete Genomics, Inc. Efficient shotgun sequencing methods
US7897344B2 (en) * 2007-11-06 2011-03-01 Complete Genomics, Inc. Methods and oligonucleotide designs for insertion of multiple adaptors into library constructs
WO2009061840A1 (en) * 2007-11-05 2009-05-14 Complete Genomics, Inc. Methods and oligonucleotide designs for insertion of multiple adaptors employing selective methylation
US8592150B2 (en) 2007-12-05 2013-11-26 Complete Genomics, Inc. Methods and compositions for long fragment read sequencing
WO2009094583A1 (en) * 2008-01-23 2009-07-30 Complete Genomics, Inc. Methods and compositions for preventing bias in amplification and sequencing reactions
WO2009132028A1 (en) * 2008-04-21 2009-10-29 Complete Genomics, Inc. Array structures for nucleic acid detection
US9524369B2 (en) 2009-06-15 2016-12-20 Complete Genomics, Inc. Processing and analysis of complex nucleic acid sequence data
AU2012219132B2 (en) * 2011-02-15 2016-05-12 Mats Nilsson Bernitz Method for localized in situ detection of mRNA
EP2744916A4 (en) 2011-07-13 2015-06-17 Primeradx Inc Multimodal methods for simultaneous detection and quantification of multiple nucleic acids in a sample
US20130157259A1 (en) * 2011-12-15 2013-06-20 Samsung Electronics Co., Ltd. Method of amplifying dna from rna in sample and use thereof
US10208339B2 (en) * 2015-02-19 2019-02-19 Takara Bio Usa, Inc. Systems and methods for whole genome amplification
KR20230166141A (en) 2016-12-09 2023-12-06 얼티뷰, 인크. Improved methods for multiplex imaging using labeled nucleic acid imaging agents
US20190382838A1 (en) * 2018-06-01 2019-12-19 The Trustees Of The University Of Pennsylvania Methods For Single-Molecule Fluorescence Amplification Of RNA
US20210381025A1 (en) * 2018-10-31 2021-12-09 The Board Of Trustees Of The Leland Stanford Junior University Methods and kits for detecting cells using oligonucleotide conjugated antibodies

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4889799A (en) * 1984-02-17 1989-12-26 Fred Hutchinson Cancer Research Center Reagent kit producing shortened target DNA segments usable in sequencing large DNA segments
CA2074214C (en) * 1991-07-23 2000-02-22 Will Bloch Improvements in the in situ pcr
US5543297A (en) * 1992-12-22 1996-08-06 Merck Frosst Canada, Inc. Human cyclooxygenase-2 cDNA and assays for evaluating cyclooxygenase-2 activity
DK0862656T3 (en) * 1995-11-21 2001-04-09 Univ Yale Unimolecular segment amplification and detection
US5854033A (en) * 1995-11-21 1998-12-29 Yale University Rolling circle replication reporter systems
AU3567099A (en) * 1998-04-16 1999-11-01 Packard Bioscience Company Analysis of polynucleotide sequence
JP2002525078A (en) * 1998-09-15 2002-08-13 イェール ユニバーシティ Artificial long terminal repeat

Also Published As

Publication number Publication date
WO2002050310A9 (en) 2002-11-28
US20020177142A1 (en) 2002-11-28
WO2002050310A3 (en) 2004-03-04
WO2002050310A2 (en) 2002-06-27
US6783943B2 (en) 2004-08-31

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