WO2023215266A1 - Bag3 and protein quality control in the brain - Google Patents

Bag3 and protein quality control in the brain Download PDF

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Publication number
WO2023215266A1
WO2023215266A1 PCT/US2023/020659 US2023020659W WO2023215266A1 WO 2023215266 A1 WO2023215266 A1 WO 2023215266A1 US 2023020659 W US2023020659 W US 2023020659W WO 2023215266 A1 WO2023215266 A1 WO 2023215266A1
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WO
WIPO (PCT)
Prior art keywords
bag3
vector
brain
promoter
expression
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
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PCT/US2023/020659
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English (en)
French (fr)
Inventor
Arthur M. Feldman
Valerie MYERS
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Temple University
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Temple University
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Filing date
Publication date
Priority to KR1020247039888A priority Critical patent/KR20250010008A/ko
Priority to JP2024564848A priority patent/JP2025514489A/ja
Priority to US18/861,495 priority patent/US20250289858A1/en
Priority to IL316559A priority patent/IL316559A/en
Priority to AU2023265031A priority patent/AU2023265031A1/en
Priority to EP23799909.9A priority patent/EP4518882A4/en
Application filed by Temple University filed Critical Temple University
Priority to CA3250880A priority patent/CA3250880A1/en
Priority to CN202380037961.7A priority patent/CN119255814A/zh
Publication of WO2023215266A1 publication Critical patent/WO2023215266A1/en
Priority to MX2024013495A priority patent/MX2024013495A/es
Anticipated expiration legal-status Critical
Ceased legal-status Critical Current

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    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00—Medicinal preparations containing peptides
    • A61K38/16—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • A61K38/17—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • A61K38/1703—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • A61K38/1709—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • C07K14/4701—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals not used
    • C07K14/4702—Regulators; Modulating activity
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • A61K48/005—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy characterised by an aspect of the 'active' part of the composition delivered, i.e. the nucleic acid delivered
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A61P25/14—Drugs for disorders of the nervous system for treating abnormal movements, e.g. chorea, dyskinesia
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A61P25/14—Drugs for disorders of the nervous system for treating abnormal movements, e.g. chorea, dyskinesia
    • A61P25/16—Anti-Parkinson drugs
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00—Drugs for disorders of the nervous system
    • A61P25/28—Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K14/00—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • C07K14/4701—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals not used
    • C07K14/4702—Regulators; Modulating activity
    • C07K14/4705—Regulators; Modulating activity stimulating, promoting or activating activity
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09—Recombinant DNA-technology
    • C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85—Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
    • C12N15/86—Viral vectors
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00—Medicinal preparations containing peptides
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2750/00—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
    • C12N2750/00011—Details
    • C12N2750/14011—Parvoviridae
    • C12N2750/14111—Dependovirus, e.g. adenoassociated viruses
    • C12N2750/14141—Use of virus, viral particle or viral elements as a vector
    • C12N2750/14143—Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector

Definitions

  • Embodiments of the invention are directed to BAG3 protein quality control in diseases or disorders of the brain, central nervous system, neurological, including traumatic injuries.
  • BAG3 plays a critical role in the heart by regulating protein quality control through enhanced autophagy and decreased apoptosis. Most recently we identified a group of functional mutations in BAG3 that were found only in individuals of African ancestry which resulted in a nearly 2-fold increase in the risk of either death or worsening heart failure requiring hospitalization.
  • Embodiments of the invention are directed to BAG3 protein quality control in diseases or disorders of the brain, central nervous system, neurological, including traumatic injuries. Examples, include, but not limited to Parkinson’s Disease, Alzheimer’s Disease and Traumatic Brain Injury complicated by Chronic Traumatic Encephalopathy.
  • genes disclosed herein which in some embodiments relate to mammalian nucleic acid and amino acid sequences are intended to encompass homologous and/or orthologous genes and gene products from other animals including, but not limited to other mammals, fish, amphibians, reptiles, and birds.
  • the genes or nucleic acid sequences are human.
  • BAG3 BAG3 molecules
  • BCL2-associated athanogene 3 (BAG3) genes BCL2-associated athanogene 3 (BAG3) molecules
  • HGNC 99) Entrez Gene (9531) Ensembl (ENSG00000151929) OMIM (603883) UniProtKB (095817)).
  • BAG3 BAG3 molecules
  • BCL2 -associated athanogene 3 (BAG3) molecules also refer to BAG3 polypeptides or active fragment thereof, proteins, variants, derivatives etc.
  • the terms “comprising,” “comprise” or “comprised,” and variations thereof, in reference to defined or described elements of an item, composition, apparatus, method, process, system, etc. are meant to be inclusive or open ended, permitting additional elements, thereby indicating that the defined or described item, composition, apparatus, method, process, system, etc. includes those specified elements — or, as appropriate, equivalents thereof — and that other elements can be included and still fall within the scope/definition of the defined item, composition, apparatus, method, process, system, etc.
  • the term “about” or “approximately” means within an acceptable error range for the particular value as determined by one of ordinary skill in the art, which will depend in part on how the value is measured or determined, i.e., the limitations of the measurement system. For example, “about” can mean within 1 or more than 1 standard deviation, per the practice in the art. Alternatively, “about” can mean a range of up to 20%, preferably up to 10%, more preferably up to 5%, and more preferably still up to 1% of a given value. Alternatively, particularly with respect to biological systems or processes, the term can mean within an order of magnitude, preferably within 5-fold, and more preferably within 2-fold, of a value. Where particular values are described in the application and claims, unless otherwise stated the term “about” meaning within an acceptable error range for the particular value should be assumed.
  • expression vector refers to a vector containing a nucleic acid sequence coding for at least part of a gene product capable of being transcribed. In some cases, RNA molecules are then translated into a protein, polypeptide, or peptide. In other cases, these sequences are not translated, for example, in the production of antisense molecules, siRNA, ribozymes, and the like.
  • Expression vectors can contain a variety of control sequences, which refer to nucleic acid sequences necessary for the transcription and possibly translation of an operatively linked coding sequence in a particular host organism. In addition to control sequences that govern transcription and translation, vectors and expression vectors may contain nucleic acid sequences that serve other functions as well.
  • a “recombinant viral vector” refers to a viral vector comprising one or more heterologous gene products or sequences. Since many viral vectors exhibit size-constraints associated with packaging, the heterologous gene products or sequences are typically introduced by replacing one or more portions of the viral genome. Such viruses may become replication- defective, requiring the deleted function(s) to be provided in trans during viral replication and encapsidation (by using, e.g., a helper virus or a packaging cell line carrying gene products necessary for replication and/or encapsidation).
  • modulate it is meant that any of the mentioned activities of the compounds embodied herein, are, e.g., increased, enhanced, increased, agonized (acts as an agonist), promoted, decreased, reduced, suppressed blocked, or antagonized (acts as an antagonist). Modulation can increase activity more than 1-fold, 2-fold, 3-fold, 5-fold, 10-fold, 100-fold, etc., over baseline values. Modulation can also decrease its activity below baseline values.
  • agent is meant to encompass any molecule, chemical entity, composition, drug, therapeutic agent, chemotherapeutic agent, or biological agent capable of preventing, ameliorating, or treating a disease or other medical condition.
  • the term includes small molecule compounds, antisense reagents, siRNA reagents, antibodies, enzymes, peptides organic or inorganic molecules, natural or synthetic compounds and the like.
  • An agent can be assayed in accordance with the methods of the invention at any stage during clinical trials, during pre-trial testing, or following FDA-approval.
  • a “therapeutically effective” amount of a compound or agent means an amount sufficient to produce a therapeutically (e.g., clinically) desirable result.
  • the compositions can be administered one from one or more times per day to one or more times per week; including once every other day.
  • the skilled artisan will appreciate that certain factors can influence the dosage and timing required to effectively treat a subject, including but not limited to the severity of the disease or disorder, previous treatments, the general health and/or age of the subject, and other diseases present.
  • treatment of a subject with a therapeutically effective amount of the compounds of the invention can include a single treatment or a series of treatments.
  • Treatment is an intervention performed with the intention of preventing the development or altering the pathology or symptoms of a disorder. Accordingly, “treatment” refers to both therapeutic treatment and prophylactic or preventative measures. “Treatment” may also be specified as palliative care. Those in need of treatment include those already with the disorder as well as those in which the disorder is to be prevented.
  • treating or “treatment” of a state, disorder or condition includes; (1) preventing or delaying the appearance of clinical symptoms of the state, disorder or condition developing in a human or other mammal that may be afflicted with or predisposed to the state, disorder or condition but does not yet experience or display clinical or subclinical symptoms of the state, disorder or condition; (2) inhibiting the state, disorder or condition, i.e., arresting, reducing or delaying the development of the disease or a relapse thereof (in case of maintenance treatment) or at least one clinical or subclinical symptom thereof; or (3) relieving the disease, i.e., causing regression of the state, disorder or condition or at least one of its clinical or subclinical symptoms.
  • the benefit to an individual to be treated is either statistically significant or at least perceptible to the patient or to the physician.
  • an agent modulates expression or amount of BCL2- associated athanogene 3 (BAG3) molecules, proteins or peptides thereof in a target cell or tissue, as compared to a normal control, comprising an expression vector expressing a BAG3 protein or active fragments thereof, oligonucleotides or combinations thereof.
  • BAG3 BCL2- associated athanogene 3
  • an agent induces expression of BAG3.
  • the agent comprises proteins or peptides thereof, peptidomimetics, small molecules, organic or inorganic compounds, synthetic or natural compounds.
  • Bcl-2 associated anthanogene-3 also known as BCL2-Associated Athanogene 3; MFM6; Bcl-2-Binding Protein Bis;CAIR-l; Docking Protein CAIR-1; BAG Family Molecular Chaperone Regulator 3; BAG-3; BCL2 -Binding Athanogene 3; or BIS, is a cytoprotective polypeptide that competes with Hip-1 for binding to HSP 70.
  • the NCBI reference amino acid sequence for BAG3 can be found at Genbank under accession number NP_004272.2; Public GI: 14043024.
  • the NCBI reference nucleic acid sequence for BAG3 can be found at Genbank under accession number NM 004281.3 GI:62530382.
  • Other BAG3 amino acid sequences include, for example, without limitation, 095817.3 GI: 12643665; EAW49383.1 GL119569768; EAW49382.1 GL119569767; and CAE55998.1 GF38502170.
  • the BAG3 polypeptide of the invention can be a variant of a polypeptide described herein, provided it retains functionality.
  • Table 1 Exemplary gene promoters driving expression in the Central Nervous System (CNS) 1
  • BAG3 plays a role in neurodegenerative diseases of the brain and can serve as an important therapeutic target: 1) BAG3 levels are expressed at high levels in the brain of mice in fact, by contrast with earlier reports, levels in the brain are comparable to those found in the heart; 2) BAG3 couples tightly with both tau and alpha-sinuclein, peptides that play an important role in Alzheimer’ s/CTE and Parkinson’s Disease respectively; and 3) Common (>1%) loss of function genetic variants found in individuals of African ancestry fail to bind to these disease causing peptides.

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  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
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  • Proteomics, Peptides & Aminoacids (AREA)
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  • General Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • General Chemical & Material Sciences (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
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  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
PCT/US2023/020659 2022-05-03 2023-05-02 Bag3 and protein quality control in the brain Ceased WO2023215266A1 (en)

Priority Applications (9)

Application Number Priority Date Filing Date Title
JP2024564848A JP2025514489A (ja) 2022-05-03 2023-05-02 脳におけるbag3およびタンパク質品質管理
US18/861,495 US20250289858A1 (en) 2022-05-03 2023-05-02 Bag3 and protein quality control in the brain
IL316559A IL316559A (en) 2022-05-03 2023-05-02 Quality control of BAG3 and brain proteins
AU2023265031A AU2023265031A1 (en) 2022-05-03 2023-05-02 Bag3 and protein quality control in the brain
EP23799909.9A EP4518882A4 (en) 2022-05-03 2023-05-02 QUALITY CONTROL OF BAG3 PROTEIN IN THE BRAIN
KR1020247039888A KR20250010008A (ko) 2022-05-03 2023-05-02 뇌에서 bag3 및 단백질 품질 관리
CA3250880A CA3250880A1 (en) 2022-05-03 2023-05-02 QUALITY CONTROL OF BAG3 PROTEIN IN THE BRAIN
CN202380037961.7A CN119255814A (zh) 2022-05-03 2023-05-02 脑中bag3和蛋白质的质量控制
MX2024013495A MX2024013495A (es) 2022-05-03 2024-10-31 Control de calidad de proteina y bag3 en el cerebro

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US202263337914P 2022-05-03 2022-05-03
US63/337,914 2022-05-03

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WO2023215266A1 true WO2023215266A1 (en) 2023-11-09

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PCT/US2023/020659 Ceased WO2023215266A1 (en) 2022-05-03 2023-05-02 Bag3 and protein quality control in the brain

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US (1) US20250289858A1 (enExample)
EP (1) EP4518882A4 (enExample)
JP (1) JP2025514489A (enExample)
KR (1) KR20250010008A (enExample)
CN (1) CN119255814A (enExample)
AU (1) AU2023265031A1 (enExample)
CA (1) CA3250880A1 (enExample)
CL (1) CL2024003318A1 (enExample)
IL (1) IL316559A (enExample)
MX (1) MX2024013495A (enExample)
WO (1) WO2023215266A1 (enExample)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2024229259A1 (en) * 2023-05-02 2024-11-07 Research Institute At Nationwide Children's Hospital Gene therapy for treatment of protein misfolding diseases

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN120478386B (zh) * 2025-07-18 2025-10-17 南京大学 一种用于预防、改善和/或治疗阿尔茨海默症的siRNA及其用途

Citations (6)

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US20090306192A1 (en) * 2001-12-28 2009-12-10 Arturo Leone BAG3 nucleotide and protein sequences to be used in research, diagnostics and therapy for cell death-involving diseases, and for modulation of cell survival and/or death
US20170016066A1 (en) * 2014-01-31 2017-01-19 Temple University Of The Commonwealth System Of Higher Education Bag3 as a target for therapy of heart failure
US20190183971A1 (en) * 2016-08-11 2019-06-20 Temple University - Of The Commonwealth System Of Higher Education Ischemia/reperfusion injury
WO2020150377A1 (en) * 2019-01-15 2020-07-23 Temple University - Of The Commonwealth System Of Higher Education Targeting the bag family for the treatment of neurodegenerative disease
US20220023350A1 (en) * 2018-11-04 2022-01-27 Figene, Llc Treatment of cerebral hypoxia including stroke, chronic traumatic encephalopathy, and traumatic brain injury
WO2023069744A1 (en) * 2021-10-22 2023-04-27 Temple University Of The Commonwealth System Of Higher Education Bag3 methods and uses for treatment of inflammation

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US20210353613A1 (en) * 2018-10-19 2021-11-18 Aclipse One Inc. Treatment of neurological disease

Patent Citations (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20090306192A1 (en) * 2001-12-28 2009-12-10 Arturo Leone BAG3 nucleotide and protein sequences to be used in research, diagnostics and therapy for cell death-involving diseases, and for modulation of cell survival and/or death
US20170016066A1 (en) * 2014-01-31 2017-01-19 Temple University Of The Commonwealth System Of Higher Education Bag3 as a target for therapy of heart failure
US20190183971A1 (en) * 2016-08-11 2019-06-20 Temple University - Of The Commonwealth System Of Higher Education Ischemia/reperfusion injury
US20220023350A1 (en) * 2018-11-04 2022-01-27 Figene, Llc Treatment of cerebral hypoxia including stroke, chronic traumatic encephalopathy, and traumatic brain injury
WO2020150377A1 (en) * 2019-01-15 2020-07-23 Temple University - Of The Commonwealth System Of Higher Education Targeting the bag family for the treatment of neurodegenerative disease
WO2023069744A1 (en) * 2021-10-22 2023-04-27 Temple University Of The Commonwealth System Of Higher Education Bag3 methods and uses for treatment of inflammation

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
See also references of EP4518882A4 *

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2024229259A1 (en) * 2023-05-02 2024-11-07 Research Institute At Nationwide Children's Hospital Gene therapy for treatment of protein misfolding diseases

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JP2025514489A (ja) 2025-05-02
EP4518882A1 (en) 2025-03-12
IL316559A (en) 2024-12-01
CA3250880A1 (en) 2023-11-09
US20250289858A1 (en) 2025-09-18
KR20250010008A (ko) 2025-01-20
EP4518882A4 (en) 2026-04-22
AU2023265031A1 (en) 2024-11-28
MX2024013495A (es) 2025-02-10
CL2024003318A1 (es) 2025-03-21
CN119255814A (zh) 2025-01-03

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