WO2023027966A1 - Pyrazine compounds as irreversible inhibitors of flt3 - Google Patents
Pyrazine compounds as irreversible inhibitors of flt3 Download PDFInfo
- Publication number
- WO2023027966A1 WO2023027966A1 PCT/US2022/040953 US2022040953W WO2023027966A1 WO 2023027966 A1 WO2023027966 A1 WO 2023027966A1 US 2022040953 W US2022040953 W US 2022040953W WO 2023027966 A1 WO2023027966 A1 WO 2023027966A1
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- formula
- substituted
- compound
- unsubstituted
- pharmaceutically acceptable
- Prior art date
Links
- 239000003112 inhibitor Substances 0.000 title claims abstract description 64
- 230000002427 irreversible effect Effects 0.000 title abstract description 20
- 101100335081 Mus musculus Flt3 gene Proteins 0.000 title 1
- 150000003216 pyrazines Chemical class 0.000 title 1
- 150000001875 compounds Chemical class 0.000 claims abstract description 498
- 102100020718 Receptor-type tyrosine-protein kinase FLT3 Human genes 0.000 claims abstract description 139
- 238000000034 method Methods 0.000 claims abstract description 109
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims abstract description 75
- 239000008194 pharmaceutical composition Substances 0.000 claims abstract description 69
- 201000010099 disease Diseases 0.000 claims abstract description 62
- 239000003814 drug Substances 0.000 claims abstract description 52
- 238000011282 treatment Methods 0.000 claims abstract description 29
- 208000002250 Hematologic Neoplasms Diseases 0.000 claims abstract description 14
- 230000002062 proliferating effect Effects 0.000 claims abstract description 10
- 101000932478 Homo sapiens Receptor-type tyrosine-protein kinase FLT3 Proteins 0.000 claims abstract description 9
- 150000003839 salts Chemical class 0.000 claims description 184
- -1 1-oxo-2-propen-1-yl Chemical group 0.000 claims description 171
- 125000005843 halogen group Chemical group 0.000 claims description 62
- 125000000592 heterocycloalkyl group Chemical group 0.000 claims description 59
- 230000035772 mutation Effects 0.000 claims description 55
- 125000004169 (C1-C6) alkyl group Chemical group 0.000 claims description 51
- 125000000217 alkyl group Chemical group 0.000 claims description 47
- 125000002947 alkylene group Chemical group 0.000 claims description 43
- 239000012453 solvate Substances 0.000 claims description 41
- IJGRMHOSHXDMSA-UHFFFAOYSA-N nitrogen Substances N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 claims description 36
- 208000031261 Acute myeloid leukaemia Diseases 0.000 claims description 33
- 229910052757 nitrogen Inorganic materials 0.000 claims description 33
- 125000002924 primary amino group Chemical group [H]N([H])* 0.000 claims description 33
- 229940002612 prodrug Drugs 0.000 claims description 33
- 239000000651 prodrug Substances 0.000 claims description 33
- 125000005842 heteroatom Chemical group 0.000 claims description 31
- 125000000753 cycloalkyl group Chemical group 0.000 claims description 27
- 125000003545 alkoxy group Chemical group 0.000 claims description 25
- NINIDFKCEFEMDL-UHFFFAOYSA-N Sulfur Chemical group [S] NINIDFKCEFEMDL-UHFFFAOYSA-N 0.000 claims description 24
- 125000004450 alkenylene group Chemical group 0.000 claims description 24
- QVGXLLKOCUKJST-UHFFFAOYSA-N atomic oxygen Chemical group [O] QVGXLLKOCUKJST-UHFFFAOYSA-N 0.000 claims description 24
- 239000001301 oxygen Chemical group 0.000 claims description 24
- 229910052760 oxygen Inorganic materials 0.000 claims description 24
- 229910052717 sulfur Chemical group 0.000 claims description 24
- 239000011593 sulfur Chemical group 0.000 claims description 24
- 125000004419 alkynylene group Chemical group 0.000 claims description 22
- QJGQUHMNIGDVPM-UHFFFAOYSA-N nitrogen group Chemical group [N] QJGQUHMNIGDVPM-UHFFFAOYSA-N 0.000 claims description 22
- 239000000546 pharmaceutical excipient Substances 0.000 claims description 22
- 206010028980 Neoplasm Diseases 0.000 claims description 19
- 125000003342 alkenyl group Chemical group 0.000 claims description 19
- 239000002207 metabolite Substances 0.000 claims description 19
- 125000004191 (C1-C6) alkoxy group Chemical group 0.000 claims description 18
- 125000001449 isopropyl group Chemical group [H]C([H])([H])C([H])(*)C([H])([H])[H] 0.000 claims description 18
- 201000011510 cancer Diseases 0.000 claims description 17
- 125000001072 heteroaryl group Chemical group 0.000 claims description 17
- 125000000304 alkynyl group Chemical group 0.000 claims description 16
- 125000003282 alkyl amino group Chemical group 0.000 claims description 14
- 125000004663 dialkyl amino group Chemical group 0.000 claims description 12
- 229910052731 fluorine Inorganic materials 0.000 claims description 12
- 125000001559 cyclopropyl group Chemical group [H]C1([H])C([H])([H])C1([H])* 0.000 claims description 11
- 125000004178 (C1-C4) alkyl group Chemical group 0.000 claims description 9
- 238000004519 manufacturing process Methods 0.000 claims description 9
- 238000002360 preparation method Methods 0.000 claims description 9
- 208000024893 Acute lymphoblastic leukemia Diseases 0.000 claims description 8
- 208000014697 Acute lymphocytic leukaemia Diseases 0.000 claims description 8
- 201000003793 Myelodysplastic syndrome Diseases 0.000 claims description 8
- 208000006664 Precursor Cell Lymphoblastic Leukemia-Lymphoma Diseases 0.000 claims description 8
- 125000001188 haloalkyl group Chemical group 0.000 claims description 8
- 125000001997 phenyl group Chemical group [H]C1=C([H])C([H])=C(*)C([H])=C1[H] 0.000 claims description 8
- 125000003386 piperidinyl group Chemical group 0.000 claims description 7
- 208000032791 BCR-ABL1 positive chronic myelogenous leukemia Diseases 0.000 claims description 6
- 208000010833 Chronic myeloid leukaemia Diseases 0.000 claims description 6
- 208000033761 Myelogenous Chronic BCR-ABL Positive Leukemia Diseases 0.000 claims description 6
- 208000033766 Prolymphocytic Leukemia Diseases 0.000 claims description 6
- 229910052801 chlorine Inorganic materials 0.000 claims description 6
- 201000009277 hairy cell leukemia Diseases 0.000 claims description 6
- 125000004438 haloalkoxy group Chemical group 0.000 claims description 6
- 208000000516 mast-cell leukemia Diseases 0.000 claims description 6
- 125000000719 pyrrolidinyl group Chemical group 0.000 claims description 6
- 208000010839 B-cell chronic lymphocytic leukemia Diseases 0.000 claims description 5
- 206010066476 Haematological malignancy Diseases 0.000 claims description 5
- 125000002785 azepinyl group Chemical group 0.000 claims description 5
- 125000004566 azetidin-1-yl group Chemical group N1(CCC1)* 0.000 claims description 5
- 125000002393 azetidinyl group Chemical group 0.000 claims description 5
- 230000002265 prevention Effects 0.000 claims description 5
- 229960005206 pyrazinamide Drugs 0.000 claims description 5
- 238000007911 parenteral administration Methods 0.000 claims description 4
- 125000000587 piperidin-1-yl group Chemical group [H]C1([H])N(*)C([H])([H])C([H])([H])C([H])([H])C1([H])[H] 0.000 claims description 4
- 125000001412 tetrahydropyranyl group Chemical group 0.000 claims description 4
- 238000011200 topical administration Methods 0.000 claims description 4
- 125000004214 1-pyrrolidinyl group Chemical group [H]C1([H])N(*)C([H])([H])C([H])([H])C1([H])[H] 0.000 claims description 3
- 230000000527 lymphocytic effect Effects 0.000 claims description 3
- 125000003718 tetrahydrofuranyl group Chemical group 0.000 claims description 2
- 238000011321 prophylaxis Methods 0.000 claims 4
- 150000002118 epoxides Chemical class 0.000 claims 2
- 230000000694 effects Effects 0.000 abstract description 43
- 229940124597 therapeutic agent Drugs 0.000 abstract description 9
- 230000001419 dependent effect Effects 0.000 abstract description 5
- 150000002391 heterocyclic compounds Chemical class 0.000 abstract 1
- 235000002639 sodium chloride Nutrition 0.000 description 157
- 239000000203 mixture Substances 0.000 description 129
- 108010003374 fms-Like Tyrosine Kinase 3 Proteins 0.000 description 126
- 238000009472 formulation Methods 0.000 description 60
- 229920003088 hydroxypropyl methyl cellulose Polymers 0.000 description 48
- 229920000036 polyvinylpyrrolidone Polymers 0.000 description 36
- 235000013855 polyvinylpyrrolidone Nutrition 0.000 description 36
- 229920001223 polyethylene glycol Polymers 0.000 description 33
- 229940079593 drug Drugs 0.000 description 31
- 238000000576 coating method Methods 0.000 description 29
- 235000010979 hydroxypropyl methyl cellulose Nutrition 0.000 description 29
- VVQNEPGJFQJSBK-UHFFFAOYSA-N Methyl methacrylate Chemical compound COC(=O)C(C)=C VVQNEPGJFQJSBK-UHFFFAOYSA-N 0.000 description 28
- 208000033776 Myeloid Acute Leukemia Diseases 0.000 description 28
- 239000001866 hydroxypropyl methyl cellulose Substances 0.000 description 28
- 239000003795 chemical substances by application Substances 0.000 description 27
- 239000001267 polyvinylpyrrolidone Substances 0.000 description 27
- 239000006185 dispersion Substances 0.000 description 26
- 125000003118 aryl group Chemical group 0.000 description 25
- 229920003134 Eudragit® polymer Polymers 0.000 description 24
- 239000002775 capsule Substances 0.000 description 24
- 239000001913 cellulose Substances 0.000 description 24
- 239000002552 dosage form Substances 0.000 description 24
- UFVKGYZPFZQRLF-UHFFFAOYSA-N hydroxypropyl methyl cellulose Chemical compound OC1C(O)C(OC)OC(CO)C1OC1C(O)C(O)C(OC2C(C(O)C(OC3C(C(O)C(O)C(CO)O3)O)C(CO)O2)O)C(CO)O1 UFVKGYZPFZQRLF-UHFFFAOYSA-N 0.000 description 24
- 150000003254 radicals Chemical group 0.000 description 24
- URAYPUMNDPQOKB-UHFFFAOYSA-N triacetin Chemical compound CC(=O)OCC(OC(C)=O)COC(C)=O URAYPUMNDPQOKB-UHFFFAOYSA-N 0.000 description 24
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 23
- 239000002904 solvent Substances 0.000 description 23
- PEDCQBHIVMGVHV-UHFFFAOYSA-N Glycerine Chemical compound OCC(O)CO PEDCQBHIVMGVHV-UHFFFAOYSA-N 0.000 description 22
- 229920002472 Starch Polymers 0.000 description 22
- 229910052799 carbon Inorganic materials 0.000 description 22
- 235000010980 cellulose Nutrition 0.000 description 22
- 229920002678 cellulose Polymers 0.000 description 22
- 239000000463 material Substances 0.000 description 22
- 108090000623 proteins and genes Proteins 0.000 description 22
- 239000002202 Polyethylene glycol Substances 0.000 description 21
- 102000004169 proteins and genes Human genes 0.000 description 21
- 235000019698 starch Nutrition 0.000 description 21
- 125000004432 carbon atom Chemical group C* 0.000 description 20
- 239000011248 coating agent Substances 0.000 description 20
- 229920000609 methyl cellulose Polymers 0.000 description 20
- 235000010981 methylcellulose Nutrition 0.000 description 20
- 239000001923 methylcellulose Substances 0.000 description 20
- LNAZSHAWQACDHT-XIYTZBAFSA-N (2r,3r,4s,5r,6s)-4,5-dimethoxy-2-(methoxymethyl)-3-[(2s,3r,4s,5r,6r)-3,4,5-trimethoxy-6-(methoxymethyl)oxan-2-yl]oxy-6-[(2r,3r,4s,5r,6r)-4,5,6-trimethoxy-2-(methoxymethyl)oxan-3-yl]oxyoxane Chemical compound CO[C@@H]1[C@@H](OC)[C@H](OC)[C@@H](COC)O[C@H]1O[C@H]1[C@H](OC)[C@@H](OC)[C@H](O[C@H]2[C@@H]([C@@H](OC)[C@H](OC)O[C@@H]2COC)OC)O[C@@H]1COC LNAZSHAWQACDHT-XIYTZBAFSA-N 0.000 description 19
- 229960002900 methylcellulose Drugs 0.000 description 19
- 239000007909 solid dosage form Substances 0.000 description 19
- 125000001424 substituent group Chemical group 0.000 description 19
- 239000006071 cream Substances 0.000 description 18
- OKTJSMMVPCPJKN-UHFFFAOYSA-N Carbon Chemical compound [C] OKTJSMMVPCPJKN-UHFFFAOYSA-N 0.000 description 17
- 241000124008 Mammalia Species 0.000 description 17
- 239000002245 particle Substances 0.000 description 17
- 239000000843 powder Substances 0.000 description 17
- 239000008107 starch Substances 0.000 description 17
- 229940032147 starch Drugs 0.000 description 17
- 239000003826 tablet Substances 0.000 description 17
- 229920002153 Hydroxypropyl cellulose Polymers 0.000 description 16
- FAPWRFPIFSIZLT-UHFFFAOYSA-M Sodium chloride Chemical compound [Na+].[Cl-] FAPWRFPIFSIZLT-UHFFFAOYSA-M 0.000 description 16
- 239000003085 diluting agent Substances 0.000 description 16
- 235000010977 hydroxypropyl cellulose Nutrition 0.000 description 16
- 239000004014 plasticizer Substances 0.000 description 16
- 239000000126 substance Substances 0.000 description 16
- DNIAPMSPPWPWGF-UHFFFAOYSA-N Propylene glycol Chemical compound CC(O)CO DNIAPMSPPWPWGF-UHFFFAOYSA-N 0.000 description 15
- 239000011230 binding agent Substances 0.000 description 15
- 125000000956 methoxy group Chemical group [H]C([H])([H])O* 0.000 description 15
- 229920000053 polysorbate 80 Polymers 0.000 description 15
- 208000024891 symptom Diseases 0.000 description 15
- FBPFZTCFMRRESA-KVTDHHQDSA-N D-Mannitol Chemical compound OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO FBPFZTCFMRRESA-KVTDHHQDSA-N 0.000 description 14
- 229930195725 Mannitol Natural products 0.000 description 14
- WHNWPMSKXPGLAX-UHFFFAOYSA-N N-Vinyl-2-pyrrolidone Chemical compound C=CN1CCCC1=O WHNWPMSKXPGLAX-UHFFFAOYSA-N 0.000 description 14
- DBMJMQXJHONAFJ-UHFFFAOYSA-M Sodium laurylsulphate Chemical compound [Na+].CCCCCCCCCCCCOS([O-])(=O)=O DBMJMQXJHONAFJ-UHFFFAOYSA-M 0.000 description 14
- DPXJVFZANSGRMM-UHFFFAOYSA-N acetic acid;2,3,4,5,6-pentahydroxyhexanal;sodium Chemical compound [Na].CC(O)=O.OCC(O)C(O)C(O)C(O)C=O DPXJVFZANSGRMM-UHFFFAOYSA-N 0.000 description 14
- 235000010443 alginic acid Nutrition 0.000 description 14
- 229920000615 alginic acid Polymers 0.000 description 14
- 125000004429 atom Chemical group 0.000 description 14
- 239000001768 carboxy methyl cellulose Substances 0.000 description 14
- 235000019441 ethanol Nutrition 0.000 description 14
- 229910052739 hydrogen Inorganic materials 0.000 description 14
- 239000007788 liquid Substances 0.000 description 14
- 235000010355 mannitol Nutrition 0.000 description 14
- 239000000594 mannitol Substances 0.000 description 14
- 125000002496 methyl group Chemical group [H]C([H])([H])* 0.000 description 14
- 235000010482 polyoxyethylene sorbitan monooleate Nutrition 0.000 description 14
- 230000008569 process Effects 0.000 description 14
- 235000019333 sodium laurylsulphate Nutrition 0.000 description 14
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 14
- 229920002785 Croscarmellose sodium Polymers 0.000 description 13
- WQZGKKKJIJFFOK-GASJEMHNSA-N Glucose Natural products OC[C@H]1OC(O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-GASJEMHNSA-N 0.000 description 13
- 239000004372 Polyvinyl alcohol Substances 0.000 description 13
- WQZGKKKJIJFFOK-VFUOTHLCSA-N beta-D-glucose Chemical compound OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O WQZGKKKJIJFFOK-VFUOTHLCSA-N 0.000 description 13
- 208000035475 disorder Diseases 0.000 description 13
- 239000002270 dispersing agent Substances 0.000 description 13
- 238000001727 in vivo Methods 0.000 description 13
- 229920002451 polyvinyl alcohol Polymers 0.000 description 13
- 229940068984 polyvinyl alcohol Drugs 0.000 description 13
- 235000019422 polyvinyl alcohol Nutrition 0.000 description 13
- 235000018102 proteins Nutrition 0.000 description 13
- 125000000391 vinyl group Chemical group [H]C([*])=C([H])[H] 0.000 description 13
- IXPNQXFRVYWDDI-UHFFFAOYSA-N 1-methyl-2,4-dioxo-1,3-diazinane-5-carboximidamide Chemical compound CN1CC(C(N)=N)C(=O)NC1=O IXPNQXFRVYWDDI-UHFFFAOYSA-N 0.000 description 12
- VBICKXHEKHSIBG-UHFFFAOYSA-N 1-monostearoylglycerol Chemical compound CCCCCCCCCCCCCCCCCC(=O)OCC(O)CO VBICKXHEKHSIBG-UHFFFAOYSA-N 0.000 description 12
- FBPFZTCFMRRESA-FSIIMWSLSA-N D-Glucitol Natural products OC[C@H](O)[C@H](O)[C@@H](O)[C@H](O)CO FBPFZTCFMRRESA-FSIIMWSLSA-N 0.000 description 12
- FBPFZTCFMRRESA-JGWLITMVSA-N D-glucitol Chemical compound OC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO FBPFZTCFMRRESA-JGWLITMVSA-N 0.000 description 12
- 229920000881 Modified starch Polymers 0.000 description 12
- CZMRCDWAGMRECN-UGDNZRGBSA-N Sucrose Chemical compound O[C@H]1[C@H](O)[C@@H](CO)O[C@@]1(CO)O[C@@H]1[C@H](O)[C@@H](O)[C@H](O)[C@@H](CO)O1 CZMRCDWAGMRECN-UGDNZRGBSA-N 0.000 description 12
- 239000007900 aqueous suspension Substances 0.000 description 12
- 125000002147 dimethylamino group Chemical group [H]C([H])([H])N(*)C([H])([H])[H] 0.000 description 12
- 235000013773 glyceryl triacetate Nutrition 0.000 description 12
- 239000001087 glyceryl triacetate Substances 0.000 description 12
- 239000001257 hydrogen Substances 0.000 description 12
- QIQXTHQIDYTFRH-UHFFFAOYSA-N octadecanoic acid Chemical group CCCCCCCCCCCCCCCCCC(O)=O QIQXTHQIDYTFRH-UHFFFAOYSA-N 0.000 description 12
- 239000000244 polyoxyethylene sorbitan monooleate Substances 0.000 description 12
- 229920006395 saturated elastomer Polymers 0.000 description 12
- 229940005550 sodium alginate Drugs 0.000 description 12
- 235000010413 sodium alginate Nutrition 0.000 description 12
- 239000000661 sodium alginate Substances 0.000 description 12
- 239000000600 sorbitol Substances 0.000 description 12
- 229960002920 sorbitol Drugs 0.000 description 12
- 235000010356 sorbitol Nutrition 0.000 description 12
- 239000004094 surface-active agent Substances 0.000 description 12
- 229960002622 triacetin Drugs 0.000 description 12
- GUBGYTABKSRVRQ-XLOQQCSPSA-N Alpha-Lactose Chemical compound O[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@H]1O[C@@H]1[C@@H](CO)O[C@H](O)[C@H](O)[C@H]1O GUBGYTABKSRVRQ-XLOQQCSPSA-N 0.000 description 11
- 241000416162 Astragalus gummifer Species 0.000 description 11
- 241000207199 Citrus Species 0.000 description 11
- 229920000663 Hydroxyethyl cellulose Polymers 0.000 description 11
- 229920001615 Tragacanth Polymers 0.000 description 11
- 235000020971 citrus fruits Nutrition 0.000 description 11
- 238000013270 controlled release Methods 0.000 description 11
- 125000004122 cyclic group Chemical group 0.000 description 11
- 239000008121 dextrose Substances 0.000 description 11
- 235000019447 hydroxyethyl cellulose Nutrition 0.000 description 11
- 150000002924 oxiranes Chemical class 0.000 description 11
- 239000007787 solid Substances 0.000 description 11
- ZZSNKZQZMQGXPY-UHFFFAOYSA-N Ethyl cellulose Chemical compound CCOCC1OC(OC)C(OCC)C(OCC)C1OC1C(O)C(O)C(OC)C(CO)O1 ZZSNKZQZMQGXPY-UHFFFAOYSA-N 0.000 description 10
- GUBGYTABKSRVRQ-QKKXKWKRSA-N Lactose Natural products OC[C@H]1O[C@@H](O[C@H]2[C@H](O)[C@@H](O)C(O)O[C@@H]2CO)[C@H](O)[C@@H](O)[C@H]1O GUBGYTABKSRVRQ-QKKXKWKRSA-N 0.000 description 10
- 235000021355 Stearic acid Nutrition 0.000 description 10
- 229930006000 Sucrose Natural products 0.000 description 10
- SPTSIOTYTJZTOG-UHFFFAOYSA-N acetic acid;octadecanoic acid Chemical compound CC(O)=O.CCCCCCCCCCCCCCCCCC(O)=O SPTSIOTYTJZTOG-UHFFFAOYSA-N 0.000 description 10
- 229920001577 copolymer Polymers 0.000 description 10
- 239000013078 crystal Substances 0.000 description 10
- 239000000796 flavoring agent Substances 0.000 description 10
- 229910052736 halogen Inorganic materials 0.000 description 10
- 239000001863 hydroxypropyl cellulose Substances 0.000 description 10
- 239000008101 lactose Substances 0.000 description 10
- 229960001375 lactose Drugs 0.000 description 10
- OQCDKBAXFALNLD-UHFFFAOYSA-N octadecanoic acid Chemical group CCCCCCCC(C)CCCCCCCCC(O)=O OQCDKBAXFALNLD-UHFFFAOYSA-N 0.000 description 10
- 229920000642 polymer Polymers 0.000 description 10
- 235000019812 sodium carboxymethyl cellulose Nutrition 0.000 description 10
- 229920001027 sodium carboxymethylcellulose Polymers 0.000 description 10
- 239000008117 stearic acid Chemical group 0.000 description 10
- 239000005720 sucrose Substances 0.000 description 10
- 229960004793 sucrose Drugs 0.000 description 10
- XZIIFPSPUDAGJM-UHFFFAOYSA-N 6-chloro-2-n,2-n-diethylpyrimidine-2,4-diamine Polymers CCN(CC)C1=NC(N)=CC(Cl)=N1 XZIIFPSPUDAGJM-UHFFFAOYSA-N 0.000 description 9
- WSFSSNUMVMOOMR-UHFFFAOYSA-N Formaldehyde Chemical compound O=C WSFSSNUMVMOOMR-UHFFFAOYSA-N 0.000 description 9
- 239000004354 Hydroxyethyl cellulose Substances 0.000 description 9
- 239000002253 acid Substances 0.000 description 9
- 125000001931 aliphatic group Chemical group 0.000 description 9
- 238000006243 chemical reaction Methods 0.000 description 9
- KRKNYBCHXYNGOX-UHFFFAOYSA-N citric acid Chemical compound OC(=O)CC(O)(C(O)=O)CC(O)=O KRKNYBCHXYNGOX-UHFFFAOYSA-N 0.000 description 9
- 239000001767 crosslinked sodium carboxy methyl cellulose Substances 0.000 description 9
- 150000002367 halogens Chemical class 0.000 description 9
- 125000004435 hydrogen atom Chemical group [H]* 0.000 description 9
- 229940071826 hydroxyethyl cellulose Drugs 0.000 description 9
- 230000036470 plasma concentration Effects 0.000 description 9
- 229920001983 poloxamer Polymers 0.000 description 9
- 239000008109 sodium starch glycolate Substances 0.000 description 9
- 229920003109 sodium starch glycolate Polymers 0.000 description 9
- 229940079832 sodium starch glycolate Drugs 0.000 description 9
- 239000003381 stabilizer Substances 0.000 description 9
- 235000000346 sugar Nutrition 0.000 description 9
- 238000012384 transportation and delivery Methods 0.000 description 9
- 239000000080 wetting agent Substances 0.000 description 9
- 229920002134 Carboxymethyl cellulose Polymers 0.000 description 8
- 108010010803 Gelatin Proteins 0.000 description 8
- 101100335080 Homo sapiens FLT3 gene Proteins 0.000 description 8
- 235000010643 Leucaena leucocephala Nutrition 0.000 description 8
- 240000007472 Leucaena leucocephala Species 0.000 description 8
- 229920000168 Microcrystalline cellulose Polymers 0.000 description 8
- UIIMBOGNXHQVGW-UHFFFAOYSA-M Sodium bicarbonate Chemical compound [Na+].OC([O-])=O UIIMBOGNXHQVGW-UHFFFAOYSA-M 0.000 description 8
- 239000004480 active ingredient Substances 0.000 description 8
- 229960001126 alginic acid Drugs 0.000 description 8
- 239000000783 alginic acid Substances 0.000 description 8
- 150000004781 alginic acids Chemical class 0.000 description 8
- SNAAJJQQZSMGQD-UHFFFAOYSA-N aluminum magnesium Chemical compound [Mg].[Al] SNAAJJQQZSMGQD-UHFFFAOYSA-N 0.000 description 8
- 230000008901 benefit Effects 0.000 description 8
- 125000004452 carbocyclyl group Chemical group 0.000 description 8
- HVYWMOMLDIMFJA-DPAQBDIFSA-N cholesterol Chemical compound C1C=C2C[C@@H](O)CC[C@]2(C)[C@@H]2[C@@H]1[C@@H]1CC[C@H]([C@H](C)CCCC(C)C)[C@@]1(C)CC2 HVYWMOMLDIMFJA-DPAQBDIFSA-N 0.000 description 8
- 239000000945 filler Substances 0.000 description 8
- 235000013355 food flavoring agent Nutrition 0.000 description 8
- 229920000159 gelatin Polymers 0.000 description 8
- 239000008273 gelatin Substances 0.000 description 8
- 229940014259 gelatin Drugs 0.000 description 8
- 235000019322 gelatine Nutrition 0.000 description 8
- 235000011852 gelatine desserts Nutrition 0.000 description 8
- 235000011187 glycerol Nutrition 0.000 description 8
- 229960005150 glycerol Drugs 0.000 description 8
- 150000002430 hydrocarbons Chemical group 0.000 description 8
- 150000002431 hydrogen Chemical class 0.000 description 8
- 230000005764 inhibitory process Effects 0.000 description 8
- 239000013038 irreversible inhibitor Substances 0.000 description 8
- 239000000314 lubricant Substances 0.000 description 8
- HQKMJHAJHXVSDF-UHFFFAOYSA-L magnesium stearate Chemical compound [Mg+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O HQKMJHAJHXVSDF-UHFFFAOYSA-L 0.000 description 8
- 235000019813 microcrystalline cellulose Nutrition 0.000 description 8
- 229940016286 microcrystalline cellulose Drugs 0.000 description 8
- 239000008108 microcrystalline cellulose Substances 0.000 description 8
- 239000006186 oral dosage form Substances 0.000 description 8
- 229940069328 povidone Drugs 0.000 description 8
- 108090000765 processed proteins & peptides Proteins 0.000 description 8
- 239000011780 sodium chloride Substances 0.000 description 8
- 239000000375 suspending agent Substances 0.000 description 8
- 238000003786 synthesis reaction Methods 0.000 description 8
- 230000001225 therapeutic effect Effects 0.000 description 8
- 238000002560 therapeutic procedure Methods 0.000 description 8
- 229920001285 xanthan gum Polymers 0.000 description 8
- IAYPIBMASNFSPL-UHFFFAOYSA-N Ethylene oxide Chemical compound C1CO1 IAYPIBMASNFSPL-UHFFFAOYSA-N 0.000 description 7
- UFHFLCQGNIYNRP-UHFFFAOYSA-N Hydrogen Chemical compound [H][H] UFHFLCQGNIYNRP-UHFFFAOYSA-N 0.000 description 7
- TVXBFESIOXBWNM-UHFFFAOYSA-N Xylitol Natural products OCCC(O)C(O)C(O)CCO TVXBFESIOXBWNM-UHFFFAOYSA-N 0.000 description 7
- 239000000654 additive Substances 0.000 description 7
- 239000003963 antioxidant agent Substances 0.000 description 7
- OSGAYBCDTDRGGQ-UHFFFAOYSA-L calcium sulfate Chemical compound [Ca+2].[O-]S([O-])(=O)=O OSGAYBCDTDRGGQ-UHFFFAOYSA-L 0.000 description 7
- 235000010948 carboxy methyl cellulose Nutrition 0.000 description 7
- 239000000460 chlorine Substances 0.000 description 7
- 230000003111 delayed effect Effects 0.000 description 7
- 230000002708 enhancing effect Effects 0.000 description 7
- 230000003628 erosive effect Effects 0.000 description 7
- 235000003599 food sweetener Nutrition 0.000 description 7
- 239000008187 granular material Substances 0.000 description 7
- 229940031704 hydroxypropyl methylcellulose phthalate Drugs 0.000 description 7
- HEBKCHPVOIAQTA-UHFFFAOYSA-N meso ribitol Natural products OCC(O)C(O)C(O)CO HEBKCHPVOIAQTA-UHFFFAOYSA-N 0.000 description 7
- 150000007523 nucleic acids Chemical group 0.000 description 7
- 229920000136 polysorbate Polymers 0.000 description 7
- 229940068968 polysorbate 80 Drugs 0.000 description 7
- 239000003755 preservative agent Substances 0.000 description 7
- 239000000047 product Substances 0.000 description 7
- 230000000541 pulsatile effect Effects 0.000 description 7
- 230000004044 response Effects 0.000 description 7
- 238000006467 substitution reaction Methods 0.000 description 7
- 239000003765 sweetening agent Substances 0.000 description 7
- 239000000454 talc Substances 0.000 description 7
- 229910052623 talc Inorganic materials 0.000 description 7
- 235000012222 talc Nutrition 0.000 description 7
- 235000010487 tragacanth Nutrition 0.000 description 7
- 239000000196 tragacanth Substances 0.000 description 7
- 229940116362 tragacanth Drugs 0.000 description 7
- 239000000811 xylitol Substances 0.000 description 7
- 235000010447 xylitol Nutrition 0.000 description 7
- HEBKCHPVOIAQTA-SCDXWVJYSA-N xylitol Chemical compound OC[C@H](O)[C@@H](O)[C@H](O)CO HEBKCHPVOIAQTA-SCDXWVJYSA-N 0.000 description 7
- 229960002675 xylitol Drugs 0.000 description 7
- CIWBSHSKHKDKBQ-JLAZNSOCSA-N Ascorbic acid Chemical compound OC[C@H](O)[C@H]1OC(=O)C(O)=C1O CIWBSHSKHKDKBQ-JLAZNSOCSA-N 0.000 description 6
- VTYYLEPIZMXCLO-UHFFFAOYSA-L Calcium carbonate Chemical compound [Ca+2].[O-]C([O-])=O VTYYLEPIZMXCLO-UHFFFAOYSA-L 0.000 description 6
- 229920002261 Corn starch Polymers 0.000 description 6
- KFZMGEQAYNKOFK-UHFFFAOYSA-N Isopropanol Chemical compound CC(C)O KFZMGEQAYNKOFK-UHFFFAOYSA-N 0.000 description 6
- FYYHWMGAXLPEAU-UHFFFAOYSA-N Magnesium Chemical compound [Mg] FYYHWMGAXLPEAU-UHFFFAOYSA-N 0.000 description 6
- 229920003091 Methocel™ Polymers 0.000 description 6
- 241001290151 Prunus avium subsp. avium Species 0.000 description 6
- HEMHJVSKTPXQMS-UHFFFAOYSA-M Sodium hydroxide Chemical compound [OH-].[Na+] HEMHJVSKTPXQMS-UHFFFAOYSA-M 0.000 description 6
- DOOTYTYQINUNNV-UHFFFAOYSA-N Triethyl citrate Chemical compound CCOC(=O)CC(O)(C(=O)OCC)CC(=O)OCC DOOTYTYQINUNNV-UHFFFAOYSA-N 0.000 description 6
- VJHCJDRQFCCTHL-UHFFFAOYSA-N acetic acid 2,3,4,5,6-pentahydroxyhexanal Chemical compound CC(O)=O.OCC(O)C(O)C(O)C(O)C=O VJHCJDRQFCCTHL-UHFFFAOYSA-N 0.000 description 6
- 235000006708 antioxidants Nutrition 0.000 description 6
- 235000012216 bentonite Nutrition 0.000 description 6
- 230000027455 binding Effects 0.000 description 6
- 230000015572 biosynthetic process Effects 0.000 description 6
- 239000001506 calcium phosphate Substances 0.000 description 6
- 235000019693 cherries Nutrition 0.000 description 6
- 239000007891 compressed tablet Substances 0.000 description 6
- 229960005168 croscarmellose Drugs 0.000 description 6
- 125000004093 cyano group Chemical group *C#N 0.000 description 6
- 125000001511 cyclopentyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 6
- FLKPEMZONWLCSK-UHFFFAOYSA-N diethyl phthalate Chemical compound CCOC(=O)C1=CC=CC=C1C(=O)OCC FLKPEMZONWLCSK-UHFFFAOYSA-N 0.000 description 6
- 239000003937 drug carrier Substances 0.000 description 6
- 238000009505 enteric coating Methods 0.000 description 6
- 239000002702 enteric coating Substances 0.000 description 6
- 235000019325 ethyl cellulose Nutrition 0.000 description 6
- 229920001249 ethyl cellulose Polymers 0.000 description 6
- 239000007888 film coating Substances 0.000 description 6
- 238000009501 film coating Methods 0.000 description 6
- 239000004615 ingredient Substances 0.000 description 6
- 239000011777 magnesium Substances 0.000 description 6
- 229910052749 magnesium Inorganic materials 0.000 description 6
- 125000004433 nitrogen atom Chemical group N* 0.000 description 6
- 229920001987 poloxamine Polymers 0.000 description 6
- 229920000058 polyacrylate Polymers 0.000 description 6
- CVHZOJJKTDOEJC-UHFFFAOYSA-N saccharin Chemical compound C1=CC=C2C(=O)NS(=O)(=O)C2=C1 CVHZOJJKTDOEJC-UHFFFAOYSA-N 0.000 description 6
- 239000011734 sodium Substances 0.000 description 6
- 235000015424 sodium Nutrition 0.000 description 6
- 229910052708 sodium Inorganic materials 0.000 description 6
- 239000006188 syrup Substances 0.000 description 6
- 235000020357 syrup Nutrition 0.000 description 6
- 238000012360 testing method Methods 0.000 description 6
- QORWJWZARLRLPR-UHFFFAOYSA-H tricalcium bis(phosphate) Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]P([O-])([O-])=O.[O-]P([O-])([O-])=O QORWJWZARLRLPR-UHFFFAOYSA-H 0.000 description 6
- 239000001993 wax Substances 0.000 description 6
- WRIDQFICGBMAFQ-UHFFFAOYSA-N (E)-8-Octadecenoic acid Natural products CCCCCCCCCC=CCCCCCCC(O)=O WRIDQFICGBMAFQ-UHFFFAOYSA-N 0.000 description 5
- ZORQXIQZAOLNGE-UHFFFAOYSA-N 1,1-difluorocyclohexane Chemical compound FC1(F)CCCCC1 ZORQXIQZAOLNGE-UHFFFAOYSA-N 0.000 description 5
- LQJBNNIYVWPHFW-UHFFFAOYSA-N 20:1omega9c fatty acid Natural products CCCCCCCCCCC=CCCCCCCCC(O)=O LQJBNNIYVWPHFW-UHFFFAOYSA-N 0.000 description 5
- QSBYPNXLFMSGKH-UHFFFAOYSA-N 9-Heptadecensaeure Natural products CCCCCCCC=CCCCCCCCC(O)=O QSBYPNXLFMSGKH-UHFFFAOYSA-N 0.000 description 5
- LYCAIKOWRPUZTN-UHFFFAOYSA-N Ethylene glycol Chemical compound OCCO LYCAIKOWRPUZTN-UHFFFAOYSA-N 0.000 description 5
- 239000005642 Oleic acid Substances 0.000 description 5
- ZQPPMHVWECSIRJ-UHFFFAOYSA-N Oleic acid Natural products CCCCCCCCC=CCCCCCCCC(O)=O ZQPPMHVWECSIRJ-UHFFFAOYSA-N 0.000 description 5
- 229920001213 Polysorbate 20 Polymers 0.000 description 5
- 102000004022 Protein-Tyrosine Kinases Human genes 0.000 description 5
- 108090000412 Protein-Tyrosine Kinases Proteins 0.000 description 5
- BCKXLBQYZLBQEK-KVVVOXFISA-M Sodium oleate Chemical compound [Na+].CCCCCCCC\C=C/CCCCCCCC([O-])=O BCKXLBQYZLBQEK-KVVVOXFISA-M 0.000 description 5
- AOBORMOPSGHCAX-UHFFFAOYSA-N Tocophersolan Chemical compound OCCOC(=O)CCC(=O)OC1=C(C)C(C)=C2OC(CCCC(C)CCCC(C)CCCC(C)C)(C)CCC2=C1C AOBORMOPSGHCAX-UHFFFAOYSA-N 0.000 description 5
- 230000001594 aberrant effect Effects 0.000 description 5
- 230000009471 action Effects 0.000 description 5
- 238000004458 analytical method Methods 0.000 description 5
- 239000002518 antifoaming agent Substances 0.000 description 5
- 125000001797 benzyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])([H])* 0.000 description 5
- 150000001721 carbon Chemical group 0.000 description 5
- 239000000969 carrier Substances 0.000 description 5
- 239000003153 chemical reaction reagent Substances 0.000 description 5
- 235000015165 citric acid Nutrition 0.000 description 5
- 239000008120 corn starch Substances 0.000 description 5
- 238000002425 crystallisation Methods 0.000 description 5
- 230000008025 crystallization Effects 0.000 description 5
- 125000001995 cyclobutyl group Chemical group [H]C1([H])C([H])([H])C([H])(*)C1([H])[H] 0.000 description 5
- 125000000113 cyclohexyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 5
- 235000014113 dietary fatty acids Nutrition 0.000 description 5
- 150000002148 esters Chemical class 0.000 description 5
- 229930195729 fatty acid Natural products 0.000 description 5
- 239000000194 fatty acid Substances 0.000 description 5
- 239000012530 fluid Substances 0.000 description 5
- 230000002496 gastric effect Effects 0.000 description 5
- 210000001035 gastrointestinal tract Anatomy 0.000 description 5
- 229940075507 glyceryl monostearate Drugs 0.000 description 5
- 229920003132 hydroxypropyl methylcellulose phthalate Polymers 0.000 description 5
- 239000012729 immediate-release (IR) formulation Substances 0.000 description 5
- QXJSBBXBKPUZAA-UHFFFAOYSA-N isooleic acid Natural products CCCCCCCC=CCCCCCCCCC(O)=O QXJSBBXBKPUZAA-UHFFFAOYSA-N 0.000 description 5
- 208000032839 leukemia Diseases 0.000 description 5
- 229960001855 mannitol Drugs 0.000 description 5
- 238000002156 mixing Methods 0.000 description 5
- 239000001788 mono and diglycerides of fatty acids Substances 0.000 description 5
- 102000039446 nucleic acids Human genes 0.000 description 5
- 108020004707 nucleic acids Proteins 0.000 description 5
- ZQPPMHVWECSIRJ-KTKRTIGZSA-N oleic acid Chemical compound CCCCCCCC\C=C/CCCCCCCC(O)=O ZQPPMHVWECSIRJ-KTKRTIGZSA-N 0.000 description 5
- 230000000144 pharmacologic effect Effects 0.000 description 5
- 210000002381 plasma Anatomy 0.000 description 5
- 235000010486 polyoxyethylene sorbitan monolaurate Nutrition 0.000 description 5
- 239000000256 polyoxyethylene sorbitan monolaurate Substances 0.000 description 5
- 229960004063 propylene glycol Drugs 0.000 description 5
- 235000013772 propylene glycol Nutrition 0.000 description 5
- CVWXJKQAOSCOAB-UHFFFAOYSA-N quizartinib Chemical compound O1C(C(C)(C)C)=CC(NC(=O)NC=2C=CC(=CC=2)C=2N=C3N(C4=CC=C(OCCN5CCOCC5)C=C4S3)C=2)=N1 CVWXJKQAOSCOAB-UHFFFAOYSA-N 0.000 description 5
- 229950001626 quizartinib Drugs 0.000 description 5
- 239000006104 solid solution Substances 0.000 description 5
- 239000000243 solution Substances 0.000 description 5
- 229940035049 sorbitan monooleate Drugs 0.000 description 5
- 235000011069 sorbitan monooleate Nutrition 0.000 description 5
- 239000001593 sorbitan monooleate Substances 0.000 description 5
- 150000008163 sugars Chemical class 0.000 description 5
- 239000000725 suspension Substances 0.000 description 5
- 239000001069 triethyl citrate Substances 0.000 description 5
- 235000013769 triethyl citrate Nutrition 0.000 description 5
- VMYFZRTXGLUXMZ-UHFFFAOYSA-N triethyl citrate Natural products CCOC(=O)C(O)(C(=O)OCC)C(=O)OCC VMYFZRTXGLUXMZ-UHFFFAOYSA-N 0.000 description 5
- 235000010493 xanthan gum Nutrition 0.000 description 5
- 239000000230 xanthan gum Substances 0.000 description 5
- 229940082509 xanthan gum Drugs 0.000 description 5
- XPCTZQVDEJYUGT-UHFFFAOYSA-N 3-hydroxy-2-methyl-4-pyrone Chemical compound CC=1OC=CC(=O)C=1O XPCTZQVDEJYUGT-UHFFFAOYSA-N 0.000 description 4
- HBAQYPYDRFILMT-UHFFFAOYSA-N 8-[3-(1-cyclopropylpyrazol-4-yl)-1H-pyrazolo[4,3-d]pyrimidin-5-yl]-3-methyl-3,8-diazabicyclo[3.2.1]octan-2-one Chemical class C1(CC1)N1N=CC(=C1)C1=NNC2=C1N=C(N=C2)N1C2C(N(CC1CC2)C)=O HBAQYPYDRFILMT-UHFFFAOYSA-N 0.000 description 4
- 102100033793 ALK tyrosine kinase receptor Human genes 0.000 description 4
- 101710168331 ALK tyrosine kinase receptor Proteins 0.000 description 4
- 244000215068 Acacia senegal Species 0.000 description 4
- WBZFUFAFFUEMEI-UHFFFAOYSA-M Acesulfame k Chemical compound [K+].CC1=CC(=O)[N-]S(=O)(=O)O1 WBZFUFAFFUEMEI-UHFFFAOYSA-M 0.000 description 4
- 229920001817 Agar Polymers 0.000 description 4
- 108010011485 Aspartame Proteins 0.000 description 4
- 239000004322 Butylated hydroxytoluene Substances 0.000 description 4
- NLZUEZXRPGMBCV-UHFFFAOYSA-N Butylhydroxytoluene Chemical compound CC1=CC(C(C)(C)C)=C(O)C(C(C)(C)C)=C1 NLZUEZXRPGMBCV-UHFFFAOYSA-N 0.000 description 4
- CURLTUGMZLYLDI-UHFFFAOYSA-N Carbon dioxide Chemical compound O=C=O CURLTUGMZLYLDI-UHFFFAOYSA-N 0.000 description 4
- 229920000623 Cellulose acetate phthalate Polymers 0.000 description 4
- 235000005979 Citrus limon Nutrition 0.000 description 4
- 244000131522 Citrus pyriformis Species 0.000 description 4
- 229920000858 Cyclodextrin Polymers 0.000 description 4
- 239000001856 Ethyl cellulose Substances 0.000 description 4
- 235000016623 Fragaria vesca Nutrition 0.000 description 4
- 240000009088 Fragaria x ananassa Species 0.000 description 4
- 235000011363 Fragaria x ananassa Nutrition 0.000 description 4
- 241000202807 Glycyrrhiza Species 0.000 description 4
- 229920000084 Gum arabic Polymers 0.000 description 4
- DGAQECJNVWCQMB-PUAWFVPOSA-M Ilexoside XXIX Chemical compound C[C@@H]1CC[C@@]2(CC[C@@]3(C(=CC[C@H]4[C@]3(CC[C@@H]5[C@@]4(CC[C@@H](C5(C)C)OS(=O)(=O)[O-])C)C)[C@@H]2[C@]1(C)O)C)C(=O)O[C@H]6[C@@H]([C@H]([C@@H]([C@H](O6)CO)O)O)O.[Na+] DGAQECJNVWCQMB-PUAWFVPOSA-M 0.000 description 4
- 206010025323 Lymphomas Diseases 0.000 description 4
- 235000014749 Mentha crispa Nutrition 0.000 description 4
- 244000246386 Mentha pulegium Species 0.000 description 4
- 235000016257 Mentha pulegium Nutrition 0.000 description 4
- 244000078639 Mentha spicata Species 0.000 description 4
- 235000004357 Mentha x piperita Nutrition 0.000 description 4
- 241001465754 Metazoa Species 0.000 description 4
- 208000034578 Multiple myelomas Diseases 0.000 description 4
- 150000001204 N-oxides Chemical class 0.000 description 4
- 206010035226 Plasma cell myeloma Diseases 0.000 description 4
- GOOHAUXETOMSMM-UHFFFAOYSA-N Propylene oxide Chemical compound CC1CO1 GOOHAUXETOMSMM-UHFFFAOYSA-N 0.000 description 4
- 101710151245 Receptor-type tyrosine-protein kinase FLT3 Proteins 0.000 description 4
- VYPSYNLAJGMNEJ-UHFFFAOYSA-N Silicium dioxide Chemical compound O=[Si]=O VYPSYNLAJGMNEJ-UHFFFAOYSA-N 0.000 description 4
- CDBYLPFSWZWCQE-UHFFFAOYSA-L Sodium Carbonate Chemical compound [Na+].[Na+].[O-]C([O-])=O CDBYLPFSWZWCQE-UHFFFAOYSA-L 0.000 description 4
- 229920002125 Sokalan® Polymers 0.000 description 4
- 239000004376 Sucralose Substances 0.000 description 4
- FEWJPZIEWOKRBE-UHFFFAOYSA-N Tartaric acid Natural products [H+].[H+].[O-]C(=O)C(O)C(O)C([O-])=O FEWJPZIEWOKRBE-UHFFFAOYSA-N 0.000 description 4
- 244000299461 Theobroma cacao Species 0.000 description 4
- GSEJCLTVZPLZKY-UHFFFAOYSA-N Triethanolamine Chemical compound OCCN(CCO)CCO GSEJCLTVZPLZKY-UHFFFAOYSA-N 0.000 description 4
- 238000002441 X-ray diffraction Methods 0.000 description 4
- 235000010489 acacia gum Nutrition 0.000 description 4
- 239000000619 acesulfame-K Substances 0.000 description 4
- 150000007513 acids Chemical class 0.000 description 4
- 239000008272 agar Substances 0.000 description 4
- 235000010419 agar Nutrition 0.000 description 4
- 238000013019 agitation Methods 0.000 description 4
- 230000004075 alteration Effects 0.000 description 4
- 229940024606 amino acid Drugs 0.000 description 4
- 235000001014 amino acid Nutrition 0.000 description 4
- 150000001413 amino acids Chemical class 0.000 description 4
- IAOZJIPTCAWIRG-QWRGUYRKSA-N aspartame Chemical compound OC(=O)C[C@H](N)C(=O)N[C@H](C(=O)OC)CC1=CC=CC=C1 IAOZJIPTCAWIRG-QWRGUYRKSA-N 0.000 description 4
- 239000000605 aspartame Substances 0.000 description 4
- 235000010357 aspartame Nutrition 0.000 description 4
- 229960003438 aspartame Drugs 0.000 description 4
- 239000002585 base Substances 0.000 description 4
- 239000000440 bentonite Substances 0.000 description 4
- 229910000278 bentonite Inorganic materials 0.000 description 4
- SVPXDRXYRYOSEX-UHFFFAOYSA-N bentoquatam Chemical compound O.O=[Si]=O.O=[Al]O[Al]=O SVPXDRXYRYOSEX-UHFFFAOYSA-N 0.000 description 4
- WPYMKLBDIGXBTP-UHFFFAOYSA-N benzoic acid Chemical compound OC(=O)C1=CC=CC=C1 WPYMKLBDIGXBTP-UHFFFAOYSA-N 0.000 description 4
- 235000021028 berry Nutrition 0.000 description 4
- 230000004071 biological effect Effects 0.000 description 4
- 210000004369 blood Anatomy 0.000 description 4
- 239000008280 blood Substances 0.000 description 4
- 235000010354 butylated hydroxytoluene Nutrition 0.000 description 4
- 229940095259 butylated hydroxytoluene Drugs 0.000 description 4
- 239000008112 carboxymethyl-cellulose Substances 0.000 description 4
- 229940105329 carboxymethylcellulose Drugs 0.000 description 4
- 239000012876 carrier material Substances 0.000 description 4
- 210000004027 cell Anatomy 0.000 description 4
- 229940081734 cellulose acetate phthalate Drugs 0.000 description 4
- 238000002512 chemotherapy Methods 0.000 description 4
- 235000012000 cholesterol Nutrition 0.000 description 4
- 238000007906 compression Methods 0.000 description 4
- 238000007796 conventional method Methods 0.000 description 4
- 230000000875 corresponding effect Effects 0.000 description 4
- 235000010947 crosslinked sodium carboxy methyl cellulose Nutrition 0.000 description 4
- 229940097362 cyclodextrins Drugs 0.000 description 4
- 229940096516 dextrates Drugs 0.000 description 4
- DOIRQSBPFJWKBE-UHFFFAOYSA-N dibutyl phthalate Chemical compound CCCCOC(=O)C1=CC=CC=C1C(=O)OCCCC DOIRQSBPFJWKBE-UHFFFAOYSA-N 0.000 description 4
- 239000007884 disintegrant Substances 0.000 description 4
- 239000008298 dragée Substances 0.000 description 4
- 239000003792 electrolyte Substances 0.000 description 4
- 150000002170 ethers Chemical class 0.000 description 4
- RRAFCDWBNXTKKO-UHFFFAOYSA-N eugenol Chemical compound COC1=CC(CC=C)=CC=C1O RRAFCDWBNXTKKO-UHFFFAOYSA-N 0.000 description 4
- 125000001153 fluoro group Chemical group F* 0.000 description 4
- 230000037406 food intake Effects 0.000 description 4
- 239000007789 gas Substances 0.000 description 4
- 239000007903 gelatin capsule Substances 0.000 description 4
- GYQYAJJFPNQOOW-UHFFFAOYSA-N gilteritinib Chemical compound N1=C(NC2CCOCC2)C(CC)=NC(C(N)=O)=C1NC(C=C1OC)=CC=C1N(CC1)CCC1N1CCN(C)CC1 GYQYAJJFPNQOOW-UHFFFAOYSA-N 0.000 description 4
- 229950006304 gilteritinib Drugs 0.000 description 4
- 235000001050 hortel pimenta Nutrition 0.000 description 4
- 229920001477 hydrophilic polymer Polymers 0.000 description 4
- 125000004356 hydroxy functional group Chemical group O* 0.000 description 4
- 238000000338 in vitro Methods 0.000 description 4
- 230000002045 lasting effect Effects 0.000 description 4
- 235000019359 magnesium stearate Nutrition 0.000 description 4
- 229940041616 menthol Drugs 0.000 description 4
- BMGQWWVMWDBQGC-IIFHNQTCSA-N midostaurin Chemical compound CN([C@H]1[C@H]([C@]2(C)O[C@@H](N3C4=CC=CC=C4C4=C5C(=O)NCC5=C5C6=CC=CC=C6N2C5=C43)C1)OC)C(=O)C1=CC=CC=C1 BMGQWWVMWDBQGC-IIFHNQTCSA-N 0.000 description 4
- 229950010895 midostaurin Drugs 0.000 description 4
- 125000004108 n-butyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 4
- 125000004123 n-propyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])* 0.000 description 4
- 125000000449 nitro group Chemical group [O-][N+](*)=O 0.000 description 4
- 229960002969 oleic acid Drugs 0.000 description 4
- 239000000825 pharmaceutical preparation Substances 0.000 description 4
- 239000006187 pill Substances 0.000 description 4
- 229920001592 potato starch Polymers 0.000 description 4
- 102000004196 processed proteins & peptides Human genes 0.000 description 4
- 238000012545 processing Methods 0.000 description 4
- 230000002441 reversible effect Effects 0.000 description 4
- 235000019204 saccharin Nutrition 0.000 description 4
- 229940081974 saccharin Drugs 0.000 description 4
- 239000000901 saccharin and its Na,K and Ca salt Substances 0.000 description 4
- ZMQAAUBTXCXRIC-UHFFFAOYSA-N safrole Chemical compound C=CCC1=CC=C2OCOC2=C1 ZMQAAUBTXCXRIC-UHFFFAOYSA-N 0.000 description 4
- 235000017557 sodium bicarbonate Nutrition 0.000 description 4
- 229910000030 sodium bicarbonate Inorganic materials 0.000 description 4
- APSBXTVYXVQYAB-UHFFFAOYSA-M sodium docusate Chemical compound [Na+].CCCCC(CC)COC(=O)CC(S([O-])(=O)=O)C(=O)OCC(CC)CCCC APSBXTVYXVQYAB-UHFFFAOYSA-M 0.000 description 4
- 210000002784 stomach Anatomy 0.000 description 4
- 235000019408 sucralose Nutrition 0.000 description 4
- BAQAVOSOZGMPRM-QBMZZYIRSA-N sucralose Chemical compound O[C@@H]1[C@@H](O)[C@@H](Cl)[C@@H](CO)O[C@@H]1O[C@@]1(CCl)[C@@H](O)[C@H](O)[C@@H](CCl)O1 BAQAVOSOZGMPRM-QBMZZYIRSA-N 0.000 description 4
- 235000002906 tartaric acid Nutrition 0.000 description 4
- 125000000999 tert-butyl group Chemical group [H]C([H])([H])C(*)(C([H])([H])[H])C([H])([H])[H] 0.000 description 4
- 125000002023 trifluoromethyl group Chemical group FC(F)(F)* 0.000 description 4
- 229960004418 trolamine Drugs 0.000 description 4
- ICLYJLBTOGPLMC-KVVVOXFISA-N (z)-octadec-9-enoate;tris(2-hydroxyethyl)azanium Chemical compound OCCN(CCO)CCO.CCCCCCCC\C=C/CCCCCCCC(O)=O ICLYJLBTOGPLMC-KVVVOXFISA-N 0.000 description 3
- NWUYHJFMYQTDRP-UHFFFAOYSA-N 1,2-bis(ethenyl)benzene;1-ethenyl-2-ethylbenzene;styrene Chemical compound C=CC1=CC=CC=C1.CCC1=CC=CC=C1C=C.C=CC1=CC=CC=C1C=C NWUYHJFMYQTDRP-UHFFFAOYSA-N 0.000 description 3
- ISAVYTVYFVQUDY-UHFFFAOYSA-N 4-tert-Octylphenol Chemical compound CC(C)(C)CC(C)(C)C1=CC=C(O)C=C1 ISAVYTVYFVQUDY-UHFFFAOYSA-N 0.000 description 3
- FHVDTGUDJYJELY-UHFFFAOYSA-N 6-{[2-carboxy-4,5-dihydroxy-6-(phosphanyloxy)oxan-3-yl]oxy}-4,5-dihydroxy-3-phosphanyloxane-2-carboxylic acid Chemical compound O1C(C(O)=O)C(P)C(O)C(O)C1OC1C(C(O)=O)OC(OP)C(O)C1O FHVDTGUDJYJELY-UHFFFAOYSA-N 0.000 description 3
- 235000006491 Acacia senegal Nutrition 0.000 description 3
- QTBSBXVTEAMEQO-UHFFFAOYSA-N Acetic acid Chemical compound CC(O)=O QTBSBXVTEAMEQO-UHFFFAOYSA-N 0.000 description 3
- WEVYAHXRMPXWCK-UHFFFAOYSA-N Acetonitrile Chemical compound CC#N WEVYAHXRMPXWCK-UHFFFAOYSA-N 0.000 description 3
- 102220487426 Actin-related protein 2/3 complex subunit 3_K15M_mutation Human genes 0.000 description 3
- 229920000856 Amylose Polymers 0.000 description 3
- OYPRJOBELJOOCE-UHFFFAOYSA-N Calcium Chemical compound [Ca] OYPRJOBELJOOCE-UHFFFAOYSA-N 0.000 description 3
- 235000013912 Ceratonia siliqua Nutrition 0.000 description 3
- 240000008886 Ceratonia siliqua Species 0.000 description 3
- 229920001661 Chitosan Polymers 0.000 description 3
- 244000007835 Cyamopsis tetragonoloba Species 0.000 description 3
- FEWJPZIEWOKRBE-JCYAYHJZSA-N Dextrotartaric acid Chemical compound OC(=O)[C@H](O)[C@@H](O)C(O)=O FEWJPZIEWOKRBE-JCYAYHJZSA-N 0.000 description 3
- 229920005682 EO-PO block copolymer Polymers 0.000 description 3
- 241001125671 Eretmochelys imbricata Species 0.000 description 3
- VGGSQFUCUMXWEO-UHFFFAOYSA-N Ethene Chemical compound C=C VGGSQFUCUMXWEO-UHFFFAOYSA-N 0.000 description 3
- 239000005977 Ethylene Substances 0.000 description 3
- JNCMHMUGTWEVOZ-UHFFFAOYSA-N F[CH]F Chemical group F[CH]F JNCMHMUGTWEVOZ-UHFFFAOYSA-N 0.000 description 3
- 229920002907 Guar gum Polymers 0.000 description 3
- 229920003114 HPC-L Polymers 0.000 description 3
- 229920003115 HPC-SL Polymers 0.000 description 3
- 101001109719 Homo sapiens Nucleophosmin Proteins 0.000 description 3
- VEXZGXHMUGYJMC-UHFFFAOYSA-N Hydrochloric acid Chemical compound Cl VEXZGXHMUGYJMC-UHFFFAOYSA-N 0.000 description 3
- 208000031422 Lymphocytic Chronic B-Cell Leukemia Diseases 0.000 description 3
- OFOBLEOULBTSOW-UHFFFAOYSA-N Malonic acid Chemical compound OC(=O)CC(O)=O OFOBLEOULBTSOW-UHFFFAOYSA-N 0.000 description 3
- 239000005913 Maltodextrin Substances 0.000 description 3
- 229920002774 Maltodextrin Polymers 0.000 description 3
- 235000006679 Mentha X verticillata Nutrition 0.000 description 3
- 235000002899 Mentha suaveolens Nutrition 0.000 description 3
- 235000001636 Mentha x rotundifolia Nutrition 0.000 description 3
- 238000005481 NMR spectroscopy Methods 0.000 description 3
- 101100330292 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) cys-12 gene Proteins 0.000 description 3
- 108091005461 Nucleic proteins Proteins 0.000 description 3
- 102100022678 Nucleophosmin Human genes 0.000 description 3
- 229920003072 Plasdone™ povidone Polymers 0.000 description 3
- 229920003171 Poly (ethylene oxide) Polymers 0.000 description 3
- KWYUFKZDYYNOTN-UHFFFAOYSA-M Potassium hydroxide Chemical compound [OH-].[K+] KWYUFKZDYYNOTN-UHFFFAOYSA-M 0.000 description 3
- RWRDLPDLKQPQOW-UHFFFAOYSA-N Pyrrolidine Chemical compound C1CCNC1 RWRDLPDLKQPQOW-UHFFFAOYSA-N 0.000 description 3
- 108020004511 Recombinant DNA Proteins 0.000 description 3
- XUIMIQQOPSSXEZ-UHFFFAOYSA-N Silicon Chemical compound [Si] XUIMIQQOPSSXEZ-UHFFFAOYSA-N 0.000 description 3
- VMHLLURERBWHNL-UHFFFAOYSA-M Sodium acetate Chemical compound [Na+].CC([O-])=O VMHLLURERBWHNL-UHFFFAOYSA-M 0.000 description 3
- 235000015125 Sterculia urens Nutrition 0.000 description 3
- 240000001058 Sterculia urens Species 0.000 description 3
- 229920002359 Tetronic® Polymers 0.000 description 3
- HCHKCACWOHOZIP-UHFFFAOYSA-N Zinc Chemical compound [Zn] HCHKCACWOHOZIP-UHFFFAOYSA-N 0.000 description 3
- 230000002378 acidificating effect Effects 0.000 description 3
- 239000013543 active substance Substances 0.000 description 3
- 239000000443 aerosol Substances 0.000 description 3
- 229940072056 alginate Drugs 0.000 description 3
- HSFWRNGVRCDJHI-UHFFFAOYSA-N alpha-acetylene Natural products C#C HSFWRNGVRCDJHI-UHFFFAOYSA-N 0.000 description 3
- 229910052782 aluminium Inorganic materials 0.000 description 3
- 150000001408 amides Chemical class 0.000 description 3
- 150000001412 amines Chemical group 0.000 description 3
- 125000000539 amino acid group Chemical group 0.000 description 3
- 239000007864 aqueous solution Substances 0.000 description 3
- 235000010323 ascorbic acid Nutrition 0.000 description 3
- 239000011668 ascorbic acid Substances 0.000 description 3
- 230000035578 autophosphorylation Effects 0.000 description 3
- 125000002619 bicyclic group Chemical group 0.000 description 3
- 239000003833 bile salt Substances 0.000 description 3
- 229940093761 bile salts Drugs 0.000 description 3
- 235000010338 boric acid Nutrition 0.000 description 3
- 239000000872 buffer Substances 0.000 description 3
- 239000011575 calcium Substances 0.000 description 3
- 229910052791 calcium Inorganic materials 0.000 description 3
- 229960005069 calcium Drugs 0.000 description 3
- 229910000019 calcium carbonate Inorganic materials 0.000 description 3
- 235000010216 calcium carbonate Nutrition 0.000 description 3
- AXCZMVOFGPJBDE-UHFFFAOYSA-L calcium dihydroxide Chemical compound [OH-].[OH-].[Ca+2] AXCZMVOFGPJBDE-UHFFFAOYSA-L 0.000 description 3
- FUFJGUQYACFECW-UHFFFAOYSA-L calcium hydrogenphosphate Chemical compound [Ca+2].OP([O-])([O-])=O FUFJGUQYACFECW-UHFFFAOYSA-L 0.000 description 3
- 239000000920 calcium hydroxide Substances 0.000 description 3
- 229910001861 calcium hydroxide Inorganic materials 0.000 description 3
- 235000011116 calcium hydroxide Nutrition 0.000 description 3
- 229910000389 calcium phosphate Inorganic materials 0.000 description 3
- 235000011010 calcium phosphates Nutrition 0.000 description 3
- 235000011132 calcium sulphate Nutrition 0.000 description 3
- 125000003178 carboxy group Chemical group [H]OC(*)=O 0.000 description 3
- 229920003123 carboxymethyl cellulose sodium Polymers 0.000 description 3
- 229940063834 carboxymethylcellulose sodium Drugs 0.000 description 3
- 239000004359 castor oil Substances 0.000 description 3
- 235000019438 castor oil Nutrition 0.000 description 3
- 239000003729 cation exchange resin Substances 0.000 description 3
- 229960004106 citric acid Drugs 0.000 description 3
- 239000004927 clay Substances 0.000 description 3
- 239000003086 colorant Substances 0.000 description 3
- 230000006835 compression Effects 0.000 description 3
- DYNHJHQFHQTFTP-UHFFFAOYSA-N crenolanib Chemical compound C=1C=C2N(C=3N=C4C(N5CCC(N)CC5)=CC=CC4=CC=3)C=NC2=CC=1OCC1(C)COC1 DYNHJHQFHQTFTP-UHFFFAOYSA-N 0.000 description 3
- 229950009240 crenolanib Drugs 0.000 description 3
- 229960000913 crospovidone Drugs 0.000 description 3
- 229920006037 cross link polymer Polymers 0.000 description 3
- 230000007423 decrease Effects 0.000 description 3
- 235000019700 dicalcium phosphate Nutrition 0.000 description 3
- 229940095079 dicalcium phosphate anhydrous Drugs 0.000 description 3
- 206010012818 diffuse large B-cell lymphoma Diseases 0.000 description 3
- 238000009792 diffusion process Methods 0.000 description 3
- 238000002149 energy-dispersive X-ray emission spectroscopy Methods 0.000 description 3
- 238000001125 extrusion Methods 0.000 description 3
- 238000001914 filtration Methods 0.000 description 3
- 239000000499 gel Substances 0.000 description 3
- 229960001031 glucose Drugs 0.000 description 3
- ZEMPKEQAKRGZGQ-XOQCFJPHSA-N glycerol triricinoleate Natural products CCCCCC[C@@H](O)CC=CCCCCCCCC(=O)OC[C@@H](COC(=O)CCCCCCCC=CC[C@@H](O)CCCCCC)OC(=O)CCCCCCCC=CC[C@H](O)CCCCCC ZEMPKEQAKRGZGQ-XOQCFJPHSA-N 0.000 description 3
- 238000005469 granulation Methods 0.000 description 3
- 230000003179 granulation Effects 0.000 description 3
- 235000010417 guar gum Nutrition 0.000 description 3
- 239000000665 guar gum Substances 0.000 description 3
- 229960002154 guar gum Drugs 0.000 description 3
- 230000036541 health Effects 0.000 description 3
- 125000004404 heteroalkyl group Chemical group 0.000 description 3
- 239000013029 homogenous suspension Substances 0.000 description 3
- 229940071676 hydroxypropylcellulose Drugs 0.000 description 3
- 230000000670 limiting effect Effects 0.000 description 3
- 229940035034 maltodextrin Drugs 0.000 description 3
- 238000004949 mass spectrometry Methods 0.000 description 3
- 239000011159 matrix material Substances 0.000 description 3
- 230000002503 metabolic effect Effects 0.000 description 3
- 230000004060 metabolic process Effects 0.000 description 3
- 238000000386 microscopy Methods 0.000 description 3
- 239000003960 organic solvent Substances 0.000 description 3
- FJKROLUGYXJWQN-UHFFFAOYSA-N papa-hydroxy-benzoic acid Chemical group OC(=O)C1=CC=C(O)C=C1 FJKROLUGYXJWQN-UHFFFAOYSA-N 0.000 description 3
- 235000010987 pectin Nutrition 0.000 description 3
- 239000001814 pectin Substances 0.000 description 3
- 229920001277 pectin Polymers 0.000 description 3
- 239000008188 pellet Substances 0.000 description 3
- 229940124531 pharmaceutical excipient Drugs 0.000 description 3
- 108091033319 polynucleotide Proteins 0.000 description 3
- 102000040430 polynucleotide Human genes 0.000 description 3
- 239000002157 polynucleotide Substances 0.000 description 3
- 229920001184 polypeptide Polymers 0.000 description 3
- 229920001282 polysaccharide Polymers 0.000 description 3
- 239000005017 polysaccharide Substances 0.000 description 3
- 229940100467 polyvinyl acetate phthalate Drugs 0.000 description 3
- 229920000523 polyvinylpolypyrrolidone Polymers 0.000 description 3
- 235000013809 polyvinylpolypyrrolidone Nutrition 0.000 description 3
- 229920006316 polyvinylpyrrolidine Polymers 0.000 description 3
- 239000007889 pulsatile dosage form Substances 0.000 description 3
- 238000000746 purification Methods 0.000 description 3
- 230000002829 reductive effect Effects 0.000 description 3
- 239000011347 resin Substances 0.000 description 3
- 229920005989 resin Polymers 0.000 description 3
- 210000002966 serum Anatomy 0.000 description 3
- 229910052710 silicon Inorganic materials 0.000 description 3
- 239000010703 silicon Substances 0.000 description 3
- 210000000813 small intestine Anatomy 0.000 description 3
- 239000001632 sodium acetate Substances 0.000 description 3
- 235000017281 sodium acetate Nutrition 0.000 description 3
- WXMKPNITSTVMEF-UHFFFAOYSA-M sodium benzoate Chemical compound [Na+].[O-]C(=O)C1=CC=CC=C1 WXMKPNITSTVMEF-UHFFFAOYSA-M 0.000 description 3
- 235000010234 sodium benzoate Nutrition 0.000 description 3
- 239000004299 sodium benzoate Substances 0.000 description 3
- 239000008279 sol Substances 0.000 description 3
- 239000007962 solid dispersion Substances 0.000 description 3
- 229940035044 sorbitan monolaurate Drugs 0.000 description 3
- 239000007921 spray Substances 0.000 description 3
- 238000001694 spray drying Methods 0.000 description 3
- 238000005507 spraying Methods 0.000 description 3
- 238000010561 standard procedure Methods 0.000 description 3
- 230000004083 survival effect Effects 0.000 description 3
- 239000007916 tablet composition Substances 0.000 description 3
- 239000011975 tartaric acid Substances 0.000 description 3
- YLQBMQCUIZJEEH-UHFFFAOYSA-N tetrahydrofuran Natural products C=1C=COC=1 YLQBMQCUIZJEEH-UHFFFAOYSA-N 0.000 description 3
- 210000001519 tissue Anatomy 0.000 description 3
- 230000000699 topical effect Effects 0.000 description 3
- 229940078499 tricalcium phosphate Drugs 0.000 description 3
- 235000019731 tricalcium phosphate Nutrition 0.000 description 3
- 229910000391 tricalcium phosphate Inorganic materials 0.000 description 3
- 229940117013 triethanolamine oleate Drugs 0.000 description 3
- 239000002023 wood Substances 0.000 description 3
- 229910052725 zinc Inorganic materials 0.000 description 3
- 239000011701 zinc Substances 0.000 description 3
- NOOLISFMXDJSKH-UTLUCORTSA-N (+)-Neomenthol Chemical compound CC(C)[C@@H]1CC[C@@H](C)C[C@@H]1O NOOLISFMXDJSKH-UTLUCORTSA-N 0.000 description 2
- NUFKRGBSZPCGQB-FLBSXDLDSA-N (3s)-3-amino-4-oxo-4-[[(2r)-1-oxo-1-[(2,2,4,4-tetramethylthietan-3-yl)amino]propan-2-yl]amino]butanoic acid;pentahydrate Chemical compound O.O.O.O.O.OC(=O)C[C@H](N)C(=O)N[C@H](C)C(=O)NC1C(C)(C)SC1(C)C.OC(=O)C[C@H](N)C(=O)N[C@H](C)C(=O)NC1C(C)(C)SC1(C)C NUFKRGBSZPCGQB-FLBSXDLDSA-N 0.000 description 2
- DSSYKIVIOFKYAU-XCBNKYQSSA-N (R)-camphor Chemical compound C1C[C@@]2(C)C(=O)C[C@@H]1C2(C)C DSSYKIVIOFKYAU-XCBNKYQSSA-N 0.000 description 2
- LDVVTQMJQSCDMK-UHFFFAOYSA-N 1,3-dihydroxypropan-2-yl formate Chemical compound OCC(CO)OC=O LDVVTQMJQSCDMK-UHFFFAOYSA-N 0.000 description 2
- RYHBNJHYFVUHQT-UHFFFAOYSA-N 1,4-Dioxane Chemical compound C1COCCO1 RYHBNJHYFVUHQT-UHFFFAOYSA-N 0.000 description 2
- SERLAGPUMNYUCK-DCUALPFSSA-N 1-O-alpha-D-glucopyranosyl-D-mannitol Chemical compound OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O SERLAGPUMNYUCK-DCUALPFSSA-N 0.000 description 2
- OKMWKBLSFKFYGZ-UHFFFAOYSA-N 1-behenoylglycerol Chemical compound CCCCCCCCCCCCCCCCCCCCCC(=O)OCC(O)CO OKMWKBLSFKFYGZ-UHFFFAOYSA-N 0.000 description 2
- PZNPLUBHRSSFHT-RRHRGVEJSA-N 1-hexadecanoyl-2-octadecanoyl-sn-glycero-3-phosphocholine Chemical compound CCCCCCCCCCCCCCCCCC(=O)O[C@@H](COP([O-])(=O)OCC[N+](C)(C)C)COC(=O)CCCCCCCCCCCCCCC PZNPLUBHRSSFHT-RRHRGVEJSA-N 0.000 description 2
- MPDGHEJMBKOTSU-YKLVYJNSSA-N 18beta-glycyrrhetic acid Chemical compound C([C@H]1C2=CC(=O)[C@H]34)[C@@](C)(C(O)=O)CC[C@]1(C)CC[C@@]2(C)[C@]4(C)CC[C@@H]1[C@]3(C)CC[C@H](O)C1(C)C MPDGHEJMBKOTSU-YKLVYJNSSA-N 0.000 description 2
- HZAXFHJVJLSVMW-UHFFFAOYSA-N 2-Aminoethan-1-ol Chemical compound NCCO HZAXFHJVJLSVMW-UHFFFAOYSA-N 0.000 description 2
- GGCILSXUAHLDMF-CQSZACIVSA-N 2-[[2-[(3r)-3-aminopiperidin-1-yl]-5-bromo-6-oxopyrimidin-1-yl]methyl]benzonitrile Chemical compound C1[C@H](N)CCCN1C1=NC=C(Br)C(=O)N1CC1=CC=CC=C1C#N GGCILSXUAHLDMF-CQSZACIVSA-N 0.000 description 2
- MIDXCONKKJTLDX-UHFFFAOYSA-N 3,5-dimethylcyclopentane-1,2-dione Chemical compound CC1CC(C)C(=O)C1=O MIDXCONKKJTLDX-UHFFFAOYSA-N 0.000 description 2
- XMIIGOLPHOKFCH-UHFFFAOYSA-N 3-phenylpropionic acid Chemical compound OC(=O)CCC1=CC=CC=C1 XMIIGOLPHOKFCH-UHFFFAOYSA-N 0.000 description 2
- OIVLITBTBDPEFK-UHFFFAOYSA-N 5,6-dihydrouracil Chemical compound O=C1CCNC(=O)N1 OIVLITBTBDPEFK-UHFFFAOYSA-N 0.000 description 2
- 241000208140 Acer Species 0.000 description 2
- NIXOWILDQLNWCW-UHFFFAOYSA-N Acrylic acid Chemical compound OC(=O)C=C NIXOWILDQLNWCW-UHFFFAOYSA-N 0.000 description 2
- 239000004377 Alitame Substances 0.000 description 2
- 244000208874 Althaea officinalis Species 0.000 description 2
- 235000006576 Althaea officinalis Nutrition 0.000 description 2
- NLXLAEXVIDQMFP-UHFFFAOYSA-N Ammonia chloride Chemical compound [NH4+].[Cl-] NLXLAEXVIDQMFP-UHFFFAOYSA-N 0.000 description 2
- 244000144730 Amygdalus persica Species 0.000 description 2
- 239000005711 Benzoic acid Substances 0.000 description 2
- 208000006386 Bone Resorption Diseases 0.000 description 2
- 208000011691 Burkitt lymphomas Diseases 0.000 description 2
- QFOHBWFCKVYLES-UHFFFAOYSA-N Butylparaben Chemical compound CCCCOC(=O)C1=CC=C(O)C=C1 QFOHBWFCKVYLES-UHFFFAOYSA-N 0.000 description 2
- 239000001736 Calcium glycerylphosphate Substances 0.000 description 2
- 239000004215 Carbon black (E152) Substances 0.000 description 2
- 102000011632 Caseins Human genes 0.000 description 2
- 108010076119 Caseins Proteins 0.000 description 2
- NPBVQXIMTZKSBA-UHFFFAOYSA-N Chavibetol Natural products COC1=CC=C(CC=C)C=C1O NPBVQXIMTZKSBA-UHFFFAOYSA-N 0.000 description 2
- 241000723346 Cinnamomum camphora Species 0.000 description 2
- 244000223760 Cinnamomum zeylanicum Species 0.000 description 2
- KRKNYBCHXYNGOX-UHFFFAOYSA-K Citrate Chemical compound [O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O KRKNYBCHXYNGOX-UHFFFAOYSA-K 0.000 description 2
- 244000241235 Citrullus lanatus Species 0.000 description 2
- 235000012828 Citrullus lanatus var citroides Nutrition 0.000 description 2
- 235000008733 Citrus aurantifolia Nutrition 0.000 description 2
- 241000675108 Citrus tangerina Species 0.000 description 2
- 240000000560 Citrus x paradisi Species 0.000 description 2
- 235000016795 Cola Nutrition 0.000 description 2
- 235000011824 Cola pachycarpa Nutrition 0.000 description 2
- 229920000742 Cotton Polymers 0.000 description 2
- RGHNJXZEOKUKBD-SQOUGZDYSA-N D-gluconic acid Chemical group OC[C@@H](O)[C@@H](O)[C@H](O)[C@@H](O)C(O)=O RGHNJXZEOKUKBD-SQOUGZDYSA-N 0.000 description 2
- NOOLISFMXDJSKH-UHFFFAOYSA-N DL-menthol Natural products CC(C)C1CCC(C)CC1O NOOLISFMXDJSKH-UHFFFAOYSA-N 0.000 description 2
- 229920002307 Dextran Polymers 0.000 description 2
- 229920001353 Dextrin Polymers 0.000 description 2
- 239000004375 Dextrin Substances 0.000 description 2
- PYGXAGIECVVIOZ-UHFFFAOYSA-N Dibutyl decanedioate Chemical compound CCCCOC(=O)CCCCCCCCC(=O)OCCCC PYGXAGIECVVIOZ-UHFFFAOYSA-N 0.000 description 2
- AOJJSUZBOXZQNB-TZSSRYMLSA-N Doxorubicin Chemical compound O([C@H]1C[C@@](O)(CC=2C(O)=C3C(=O)C=4C=CC=C(C=4C(=O)C3=C(O)C=21)OC)C(=O)CO)[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1 AOJJSUZBOXZQNB-TZSSRYMLSA-N 0.000 description 2
- 102000004190 Enzymes Human genes 0.000 description 2
- 108090000790 Enzymes Proteins 0.000 description 2
- PIICEJLVQHRZGT-UHFFFAOYSA-N Ethylenediamine Chemical compound NCCN PIICEJLVQHRZGT-UHFFFAOYSA-N 0.000 description 2
- 244000166102 Eucalyptus leucoxylon Species 0.000 description 2
- 239000005770 Eugenol Substances 0.000 description 2
- 229930091371 Fructose Natural products 0.000 description 2
- 239000005715 Fructose Substances 0.000 description 2
- RFSUNEUAIZKAJO-ARQDHWQXSA-N Fructose Chemical compound OC[C@H]1O[C@](O)(CO)[C@@H](O)[C@@H]1O RFSUNEUAIZKAJO-ARQDHWQXSA-N 0.000 description 2
- VZCYOOQTPOCHFL-OWOJBTEDSA-N Fumaric acid Chemical compound OC(=O)\C=C\C(O)=O VZCYOOQTPOCHFL-OWOJBTEDSA-N 0.000 description 2
- 240000001238 Gaultheria procumbens Species 0.000 description 2
- 235000007297 Gaultheria procumbens Nutrition 0.000 description 2
- DHMQDGOQFOQNFH-UHFFFAOYSA-N Glycine Chemical compound NCC(O)=O DHMQDGOQFOQNFH-UHFFFAOYSA-N 0.000 description 2
- AEMRFAOFKBGASW-UHFFFAOYSA-N Glycolic acid Chemical compound OCC(O)=O AEMRFAOFKBGASW-UHFFFAOYSA-N 0.000 description 2
- 235000001453 Glycyrrhiza echinata Nutrition 0.000 description 2
- 235000006200 Glycyrrhiza glabra Nutrition 0.000 description 2
- 235000017382 Glycyrrhiza lepidota Nutrition 0.000 description 2
- 108010081348 HRT1 protein Hairy Chemical group 0.000 description 2
- 102100021881 Hairy/enhancer-of-split related with YRPW motif protein 1 Human genes 0.000 description 2
- 101000801619 Homo sapiens Long-chain-fatty-acid-CoA ligase ACSBG1 Proteins 0.000 description 2
- 206010061218 Inflammation Diseases 0.000 description 2
- 240000007049 Juglans regia Species 0.000 description 2
- 235000009496 Juglans regia Nutrition 0.000 description 2
- ROHFNLRQFUQHCH-YFKPBYRVSA-N L-leucine Chemical compound CC(C)C[C@H](N)C(O)=O ROHFNLRQFUQHCH-YFKPBYRVSA-N 0.000 description 2
- 208000031671 Large B-Cell Diffuse Lymphoma Diseases 0.000 description 2
- 241000218652 Larix Species 0.000 description 2
- 235000005590 Larix decidua Nutrition 0.000 description 2
- ROHFNLRQFUQHCH-UHFFFAOYSA-N Leucine Natural products CC(C)CC(N)C(O)=O ROHFNLRQFUQHCH-UHFFFAOYSA-N 0.000 description 2
- 102100033564 Long-chain-fatty-acid-CoA ligase ACSBG1 Human genes 0.000 description 2
- HYMLWHLQFGRFIY-UHFFFAOYSA-N Maltol Natural products CC1OC=CC(=O)C1=O HYMLWHLQFGRFIY-UHFFFAOYSA-N 0.000 description 2
- 235000011430 Malus pumila Nutrition 0.000 description 2
- 235000015103 Malus silvestris Nutrition 0.000 description 2
- 235000014766 Mentha X piperi var citrata Nutrition 0.000 description 2
- 235000007421 Mentha citrata Nutrition 0.000 description 2
- 235000008660 Mentha x piperita subsp citrata Nutrition 0.000 description 2
- AFVFQIVMOAPDHO-UHFFFAOYSA-N Methanesulfonic acid Chemical compound CS(O)(=O)=O AFVFQIVMOAPDHO-UHFFFAOYSA-N 0.000 description 2
- 240000003637 Monarda citriodora Species 0.000 description 2
- 235000002431 Monarda citriodora Nutrition 0.000 description 2
- ILRKKHJEINIICQ-OOFFSTKBSA-N Monoammonium glycyrrhizinate Chemical compound N.O([C@@H]1[C@@H](O)[C@H](O)[C@H](O[C@@H]1O[C@H]1CC[C@]2(C)[C@H]3C(=O)C=C4[C@@H]5C[C@](C)(CC[C@@]5(CC[C@@]4(C)[C@]3(C)CC[C@H]2C1(C)C)C)C(O)=O)C(O)=O)[C@@H]1O[C@H](C(O)=O)[C@@H](O)[C@H](O)[C@H]1O ILRKKHJEINIICQ-OOFFSTKBSA-N 0.000 description 2
- YNAVUWVOSKDBBP-UHFFFAOYSA-N Morpholine Chemical compound C1COCCN1 YNAVUWVOSKDBBP-UHFFFAOYSA-N 0.000 description 2
- 229920000715 Mucilage Polymers 0.000 description 2
- 240000005561 Musa balbisiana Species 0.000 description 2
- 235000018290 Musa x paradisiaca Nutrition 0.000 description 2
- 240000009023 Myrrhis odorata Species 0.000 description 2
- 235000007265 Myrrhis odorata Nutrition 0.000 description 2
- LRHPLDYGYMQRHN-UHFFFAOYSA-N N-Butanol Chemical compound CCCCO LRHPLDYGYMQRHN-UHFFFAOYSA-N 0.000 description 2
- 239000004384 Neotame Substances 0.000 description 2
- 208000001132 Osteoporosis Diseases 0.000 description 2
- ISWSIDIOOBJBQZ-UHFFFAOYSA-N Phenol Chemical compound OC1=CC=CC=C1 ISWSIDIOOBJBQZ-UHFFFAOYSA-N 0.000 description 2
- NBIIXXVUZAFLBC-UHFFFAOYSA-N Phosphoric acid Chemical compound OP(O)(O)=O NBIIXXVUZAFLBC-UHFFFAOYSA-N 0.000 description 2
- OAICVXFJPJFONN-UHFFFAOYSA-N Phosphorus Chemical compound [P] OAICVXFJPJFONN-UHFFFAOYSA-N 0.000 description 2
- 108091000080 Phosphotransferase Proteins 0.000 description 2
- 235000012550 Pimpinella anisum Nutrition 0.000 description 2
- GLUUGHFHXGJENI-UHFFFAOYSA-N Piperazine Chemical compound C1CNCCN1 GLUUGHFHXGJENI-UHFFFAOYSA-N 0.000 description 2
- NQRYJNQNLNOLGT-UHFFFAOYSA-N Piperidine Chemical compound C1CCNCC1 NQRYJNQNLNOLGT-UHFFFAOYSA-N 0.000 description 2
- 229920002534 Polyethylene Glycol 1450 Polymers 0.000 description 2
- 229920002556 Polyethylene Glycol 300 Polymers 0.000 description 2
- 229920002562 Polyethylene Glycol 3350 Polymers 0.000 description 2
- 229920002565 Polyethylene Glycol 400 Polymers 0.000 description 2
- 229920001030 Polyethylene Glycol 4000 Polymers 0.000 description 2
- 229920002582 Polyethylene Glycol 600 Polymers 0.000 description 2
- 229920002593 Polyethylene Glycol 800 Polymers 0.000 description 2
- 229920001214 Polysorbate 60 Polymers 0.000 description 2
- ZLMJMSJWJFRBEC-UHFFFAOYSA-N Potassium Chemical compound [K] ZLMJMSJWJFRBEC-UHFFFAOYSA-N 0.000 description 2
- WCUXLLCKKVVCTQ-UHFFFAOYSA-M Potassium chloride Chemical compound [Cl-].[K+] WCUXLLCKKVVCTQ-UHFFFAOYSA-M 0.000 description 2
- 235000010401 Prunus avium Nutrition 0.000 description 2
- 235000006040 Prunus persica var persica Nutrition 0.000 description 2
- 240000008296 Prunus serotina Species 0.000 description 2
- 235000014441 Prunus serotina Nutrition 0.000 description 2
- UVMRYBDEERADNV-UHFFFAOYSA-N Pseudoeugenol Natural products COC1=CC(C(C)=C)=CC=C1O UVMRYBDEERADNV-UHFFFAOYSA-N 0.000 description 2
- JUJWROOIHBZHMG-UHFFFAOYSA-N Pyridine Chemical compound C1=CC=NC=C1 JUJWROOIHBZHMG-UHFFFAOYSA-N 0.000 description 2
- CZPWVGJYEJSRLH-UHFFFAOYSA-N Pyrimidine Chemical compound C1=CN=CN=C1 CZPWVGJYEJSRLH-UHFFFAOYSA-N 0.000 description 2
- KAESVJOAVNADME-UHFFFAOYSA-N Pyrrole Chemical compound C=1C=CNC=1 KAESVJOAVNADME-UHFFFAOYSA-N 0.000 description 2
- 235000014443 Pyrus communis Nutrition 0.000 description 2
- 240000001987 Pyrus communis Species 0.000 description 2
- LCTONWCANYUPML-UHFFFAOYSA-N Pyruvic acid Chemical compound CC(=O)C(O)=O LCTONWCANYUPML-UHFFFAOYSA-N 0.000 description 2
- 240000001890 Ribes hudsonianum Species 0.000 description 2
- 235000016954 Ribes hudsonianum Nutrition 0.000 description 2
- 235000001466 Ribes nigrum Nutrition 0.000 description 2
- 240000007651 Rubus glaucus Species 0.000 description 2
- 235000011034 Rubus glaucus Nutrition 0.000 description 2
- 235000009122 Rubus idaeus Nutrition 0.000 description 2
- 102000001712 STAT5 Transcription Factor Human genes 0.000 description 2
- 108010029477 STAT5 Transcription Factor Proteins 0.000 description 2
- 244000228451 Stevia rebaudiana Species 0.000 description 2
- QAOWNCQODCNURD-UHFFFAOYSA-N Sulfuric acid Chemical compound OS(O)(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-N 0.000 description 2
- RAHZWNYVWXNFOC-UHFFFAOYSA-N Sulphur dioxide Chemical compound O=S=O RAHZWNYVWXNFOC-UHFFFAOYSA-N 0.000 description 2
- 102000006463 Talin Human genes 0.000 description 2
- 108010083809 Talin Proteins 0.000 description 2
- WYURNTSHIVDZCO-UHFFFAOYSA-N Tetrahydrofuran Chemical compound C1CCOC1 WYURNTSHIVDZCO-UHFFFAOYSA-N 0.000 description 2
- 235000009470 Theobroma cacao Nutrition 0.000 description 2
- YTPLMLYBLZKORZ-UHFFFAOYSA-N Thiophene Chemical compound C=1C=CSC=1 YTPLMLYBLZKORZ-UHFFFAOYSA-N 0.000 description 2
- 235000011941 Tilia x europaea Nutrition 0.000 description 2
- 240000006909 Tilia x europaea Species 0.000 description 2
- GWEVSGVZZGPLCZ-UHFFFAOYSA-N Titan oxide Chemical compound O=[Ti]=O GWEVSGVZZGPLCZ-UHFFFAOYSA-N 0.000 description 2
- ZFOZVQLOBQUTQQ-UHFFFAOYSA-N Tributyl citrate Chemical compound CCCCOC(=O)CC(O)(C(=O)OCCCC)CC(=O)OCCCC ZFOZVQLOBQUTQQ-UHFFFAOYSA-N 0.000 description 2
- DTQVDTLACAAQTR-UHFFFAOYSA-N Trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F DTQVDTLACAAQTR-UHFFFAOYSA-N 0.000 description 2
- 235000009499 Vanilla fragrans Nutrition 0.000 description 2
- 244000263375 Vanilla tahitensis Species 0.000 description 2
- 235000012036 Vanilla tahitensis Nutrition 0.000 description 2
- 235000009754 Vitis X bourquina Nutrition 0.000 description 2
- 235000012333 Vitis X labruscana Nutrition 0.000 description 2
- 240000006365 Vitis vinifera Species 0.000 description 2
- 235000014787 Vitis vinifera Nutrition 0.000 description 2
- 235000006886 Zingiber officinale Nutrition 0.000 description 2
- 244000273928 Zingiber officinale Species 0.000 description 2
- 238000010521 absorption reaction Methods 0.000 description 2
- 235000010358 acesulfame potassium Nutrition 0.000 description 2
- 229960004998 acesulfame potassium Drugs 0.000 description 2
- 235000011054 acetic acid Nutrition 0.000 description 2
- 230000004913 activation Effects 0.000 description 2
- 239000000853 adhesive Substances 0.000 description 2
- 230000002411 adverse Effects 0.000 description 2
- 125000003158 alcohol group Chemical group 0.000 description 2
- 235000019409 alitame Nutrition 0.000 description 2
- 108010009985 alitame Proteins 0.000 description 2
- 229910052783 alkali metal Inorganic materials 0.000 description 2
- 150000001340 alkali metals Chemical class 0.000 description 2
- 229910052784 alkaline earth metal Inorganic materials 0.000 description 2
- 150000003973 alkyl amines Chemical class 0.000 description 2
- XAGFODPZIPBFFR-UHFFFAOYSA-N aluminium Chemical compound [Al] XAGFODPZIPBFFR-UHFFFAOYSA-N 0.000 description 2
- 238000010171 animal model Methods 0.000 description 2
- 125000000129 anionic group Chemical group 0.000 description 2
- 239000000420 anogeissus latifolia wall. gum Substances 0.000 description 2
- 229940027983 antiseptic and disinfectant quaternary ammonium compound Drugs 0.000 description 2
- 125000003710 aryl alkyl group Chemical group 0.000 description 2
- 229960005070 ascorbic acid Drugs 0.000 description 2
- 238000003556 assay Methods 0.000 description 2
- 235000011956 bavarian cream Nutrition 0.000 description 2
- 239000011324 bead Substances 0.000 description 2
- 229940092782 bentonite Drugs 0.000 description 2
- 229960000686 benzalkonium chloride Drugs 0.000 description 2
- 125000000499 benzofuranyl group Chemical group O1C(=CC2=C1C=CC=C2)* 0.000 description 2
- 235000010233 benzoic acid Nutrition 0.000 description 2
- 125000004196 benzothienyl group Chemical group S1C(=CC2=C1C=CC=C2)* 0.000 description 2
- CADWTSSKOVRVJC-UHFFFAOYSA-N benzyl(dimethyl)azanium;chloride Chemical compound [Cl-].C[NH+](C)CC1=CC=CC=C1 CADWTSSKOVRVJC-UHFFFAOYSA-N 0.000 description 2
- 239000007890 bioerodible dosage form Substances 0.000 description 2
- 229920001400 block copolymer Polymers 0.000 description 2
- 238000009835 boiling Methods 0.000 description 2
- 230000024279 bone resorption Effects 0.000 description 2
- KGBXLFKZBHKPEV-UHFFFAOYSA-N boric acid Chemical compound OB(O)O KGBXLFKZBHKPEV-UHFFFAOYSA-N 0.000 description 2
- 239000004327 boric acid Substances 0.000 description 2
- 235000010634 bubble gum Nutrition 0.000 description 2
- KDKYADYSIPSCCQ-UHFFFAOYSA-N but-1-yne Chemical compound CCC#C KDKYADYSIPSCCQ-UHFFFAOYSA-N 0.000 description 2
- 229960003563 calcium carbonate Drugs 0.000 description 2
- FNAQSUUGMSOBHW-UHFFFAOYSA-H calcium citrate Chemical compound [Ca+2].[Ca+2].[Ca+2].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O.[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O FNAQSUUGMSOBHW-UHFFFAOYSA-H 0.000 description 2
- 239000001354 calcium citrate Substances 0.000 description 2
- 229940095618 calcium glycerophosphate Drugs 0.000 description 2
- UHHRFSOMMCWGSO-UHFFFAOYSA-L calcium glycerophosphate Chemical compound [Ca+2].OCC(CO)OP([O-])([O-])=O UHHRFSOMMCWGSO-UHFFFAOYSA-L 0.000 description 2
- 235000019299 calcium glycerylphosphate Nutrition 0.000 description 2
- MKJXYGKVIBWPFZ-UHFFFAOYSA-L calcium lactate Chemical compound [Ca+2].CC(O)C([O-])=O.CC(O)C([O-])=O MKJXYGKVIBWPFZ-UHFFFAOYSA-L 0.000 description 2
- 239000001527 calcium lactate Substances 0.000 description 2
- 235000011086 calcium lactate Nutrition 0.000 description 2
- 229960002401 calcium lactate Drugs 0.000 description 2
- 229960000846 camphor Drugs 0.000 description 2
- 229930008380 camphor Natural products 0.000 description 2
- 235000013736 caramel Nutrition 0.000 description 2
- 229960001631 carbomer Drugs 0.000 description 2
- 239000001569 carbon dioxide Substances 0.000 description 2
- 229910002092 carbon dioxide Inorganic materials 0.000 description 2
- 235000010418 carrageenan Nutrition 0.000 description 2
- 229920001525 carrageenan Polymers 0.000 description 2
- 239000000679 carrageenan Substances 0.000 description 2
- 229940113118 carrageenan Drugs 0.000 description 2
- 230000001413 cellular effect Effects 0.000 description 2
- 235000019219 chocolate Nutrition 0.000 description 2
- 150000001840 cholesterol esters Chemical class 0.000 description 2
- 238000004587 chromatography analysis Methods 0.000 description 2
- 208000032852 chronic lymphocytic leukemia Diseases 0.000 description 2
- 235000017803 cinnamon Nutrition 0.000 description 2
- 150000001860 citric acid derivatives Chemical class 0.000 description 2
- 238000005354 coacervation Methods 0.000 description 2
- 239000008199 coating composition Substances 0.000 description 2
- 229940075614 colloidal silicon dioxide Drugs 0.000 description 2
- 210000001072 colon Anatomy 0.000 description 2
- 235000009508 confectionery Nutrition 0.000 description 2
- 230000008878 coupling Effects 0.000 description 2
- 238000010168 coupling process Methods 0.000 description 2
- 238000005859 coupling reaction Methods 0.000 description 2
- 239000004148 curcumin Substances 0.000 description 2
- 229940109275 cyclamate Drugs 0.000 description 2
- 125000001316 cycloalkyl alkyl group Chemical group 0.000 description 2
- 125000000582 cycloheptyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C1([H])[H] 0.000 description 2
- HCAJEUSONLESMK-UHFFFAOYSA-N cyclohexylsulfamic acid Chemical compound OS(=O)(=O)NC1CCCCC1 HCAJEUSONLESMK-UHFFFAOYSA-N 0.000 description 2
- GVJHHUAWPYXKBD-UHFFFAOYSA-N d-alpha-tocopherol Natural products OC1=C(C)C(C)=C2OC(CCCC(C)CCCC(C)CCCC(C)C)(C)CCC2=C1C GVJHHUAWPYXKBD-UHFFFAOYSA-N 0.000 description 2
- 238000013461 design Methods 0.000 description 2
- 230000001627 detrimental effect Effects 0.000 description 2
- 229960002086 dextran Drugs 0.000 description 2
- 235000019425 dextrin Nutrition 0.000 description 2
- 229940099371 diacetylated monoglycerides Drugs 0.000 description 2
- RBLGLDWTCZMLRW-UHFFFAOYSA-K dicalcium;phosphate;dihydrate Chemical compound O.O.[Ca+2].[Ca+2].[O-]P([O-])([O-])=O RBLGLDWTCZMLRW-UHFFFAOYSA-K 0.000 description 2
- FSBVERYRVPGNGG-UHFFFAOYSA-N dimagnesium dioxido-bis[[oxido(oxo)silyl]oxy]silane hydrate Chemical compound O.[Mg+2].[Mg+2].[O-][Si](=O)O[Si]([O-])([O-])O[Si]([O-])=O FSBVERYRVPGNGG-UHFFFAOYSA-N 0.000 description 2
- XBDQKXXYIPTUBI-UHFFFAOYSA-N dimethylselenoniopropionate Natural products CCC(O)=O XBDQKXXYIPTUBI-UHFFFAOYSA-N 0.000 description 2
- OSVXSBDYLRYLIG-UHFFFAOYSA-N dioxidochlorine(.) Chemical compound O=Cl=O OSVXSBDYLRYLIG-UHFFFAOYSA-N 0.000 description 2
- ZPWVASYFFYYZEW-UHFFFAOYSA-L dipotassium hydrogen phosphate Chemical compound [K+].[K+].OP([O-])([O-])=O ZPWVASYFFYYZEW-UHFFFAOYSA-L 0.000 description 2
- 229910000396 dipotassium phosphate Inorganic materials 0.000 description 2
- 235000019797 dipotassium phosphate Nutrition 0.000 description 2
- 238000007907 direct compression Methods 0.000 description 2
- 238000004090 dissolution Methods 0.000 description 2
- 238000012377 drug delivery Methods 0.000 description 2
- 238000009510 drug design Methods 0.000 description 2
- 235000013399 edible fruits Nutrition 0.000 description 2
- 239000007911 effervescent powder Substances 0.000 description 2
- 239000007938 effervescent tablet Substances 0.000 description 2
- 235000013601 eggs Nutrition 0.000 description 2
- 239000012039 electrophile Substances 0.000 description 2
- 239000003995 emulsifying agent Substances 0.000 description 2
- 239000000839 emulsion Substances 0.000 description 2
- 238000005516 engineering process Methods 0.000 description 2
- 229940088598 enzyme Drugs 0.000 description 2
- 229960002217 eugenol Drugs 0.000 description 2
- 238000013265 extended release Methods 0.000 description 2
- 150000004665 fatty acids Chemical class 0.000 description 2
- 235000019634 flavors Nutrition 0.000 description 2
- 108700014844 flt3 ligand Proteins 0.000 description 2
- 201000003444 follicular lymphoma Diseases 0.000 description 2
- 239000012458 free base Substances 0.000 description 2
- VZCYOOQTPOCHFL-OWOJBTEDSA-L fumarate(2-) Chemical compound [O-]C(=O)\C=C\C([O-])=O VZCYOOQTPOCHFL-OWOJBTEDSA-L 0.000 description 2
- 230000004927 fusion Effects 0.000 description 2
- 235000008397 ginger Nutrition 0.000 description 2
- 239000008103 glucose Substances 0.000 description 2
- 125000005456 glyceride group Chemical group 0.000 description 2
- 229940049654 glyceryl behenate Drugs 0.000 description 2
- 235000019314 gum ghatti Nutrition 0.000 description 2
- 230000002489 hematologic effect Effects 0.000 description 2
- 210000003958 hematopoietic stem cell Anatomy 0.000 description 2
- 125000000623 heterocyclic group Chemical group 0.000 description 2
- BXWNKGSJHAJOGX-UHFFFAOYSA-N hexadecan-1-ol Chemical compound CCCCCCCCCCCCCCCCO BXWNKGSJHAJOGX-UHFFFAOYSA-N 0.000 description 2
- 238000004128 high performance liquid chromatography Methods 0.000 description 2
- 235000012907 honey Nutrition 0.000 description 2
- 239000010903 husk Substances 0.000 description 2
- 150000004677 hydrates Chemical class 0.000 description 2
- 229930195733 hydrocarbon Natural products 0.000 description 2
- 235000011167 hydrochloric acid Nutrition 0.000 description 2
- WGCNASOHLSPBMP-UHFFFAOYSA-N hydroxyacetaldehyde Natural products OCC=O WGCNASOHLSPBMP-UHFFFAOYSA-N 0.000 description 2
- 125000002768 hydroxyalkyl group Chemical group 0.000 description 2
- 229920000639 hydroxypropylmethylcellulose acetate succinate Polymers 0.000 description 2
- 125000003453 indazolyl group Chemical group N1N=C(C2=C1C=CC=C2)* 0.000 description 2
- 208000027866 inflammatory disease Diseases 0.000 description 2
- 238000002329 infrared spectrum Methods 0.000 description 2
- 230000003993 interaction Effects 0.000 description 2
- 238000007918 intramuscular administration Methods 0.000 description 2
- 238000001990 intravenous administration Methods 0.000 description 2
- LTINPJMVDKPJJI-UHFFFAOYSA-N iodinated glycerol Chemical compound CC(I)C1OCC(CO)O1 LTINPJMVDKPJJI-UHFFFAOYSA-N 0.000 description 2
- 238000004255 ion exchange chromatography Methods 0.000 description 2
- 229960004768 irinotecan Drugs 0.000 description 2
- GURKHSYORGJETM-WAQYZQTGSA-N irinotecan hydrochloride (anhydrous) Chemical compound Cl.C1=C2C(CC)=C3CN(C(C4=C([C@@](C(=O)OC4)(O)CC)C=4)=O)C=4C3=NC2=CC=C1OC(=O)N(CC1)CCC1N1CCCCC1 GURKHSYORGJETM-WAQYZQTGSA-N 0.000 description 2
- SUMDYPCJJOFFON-UHFFFAOYSA-N isethionic acid Chemical compound OCCS(O)(=O)=O SUMDYPCJJOFFON-UHFFFAOYSA-N 0.000 description 2
- 125000000959 isobutyl group Chemical group [H]C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 2
- 239000000905 isomalt Substances 0.000 description 2
- 235000010439 isomalt Nutrition 0.000 description 2
- HPIGCVXMBGOWTF-UHFFFAOYSA-N isomaltol Natural products CC(=O)C=1OC=CC=1O HPIGCVXMBGOWTF-UHFFFAOYSA-N 0.000 description 2
- BJHIKXHVCXFQLS-PQLUHFTBSA-N keto-D-tagatose Chemical compound OC[C@@H](O)[C@H](O)[C@H](O)C(=O)CO BJHIKXHVCXFQLS-PQLUHFTBSA-N 0.000 description 2
- JVTAAEKCZFNVCJ-UHFFFAOYSA-N lactic acid Chemical compound CC(O)C(O)=O JVTAAEKCZFNVCJ-UHFFFAOYSA-N 0.000 description 2
- 235000014655 lactic acid Nutrition 0.000 description 2
- 239000000832 lactitol Substances 0.000 description 2
- 235000010448 lactitol Nutrition 0.000 description 2
- VQHSOMBJVWLPSR-JVCRWLNRSA-N lactitol Chemical compound OC[C@H](O)[C@@H](O)[C@@H]([C@H](O)CO)O[C@@H]1O[C@H](CO)[C@H](O)[C@H](O)[C@H]1O VQHSOMBJVWLPSR-JVCRWLNRSA-N 0.000 description 2
- 229960003451 lactitol Drugs 0.000 description 2
- 239000010410 layer Substances 0.000 description 2
- 235000019223 lemon-lime Nutrition 0.000 description 2
- 235000005772 leucine Nutrition 0.000 description 2
- 229940010454 licorice Drugs 0.000 description 2
- 239000004571 lime Substances 0.000 description 2
- 239000012669 liquid formulation Substances 0.000 description 2
- 239000000391 magnesium silicate Substances 0.000 description 2
- 235000019792 magnesium silicate Nutrition 0.000 description 2
- 229910052919 magnesium silicate Inorganic materials 0.000 description 2
- 229960002366 magnesium silicate Drugs 0.000 description 2
- 235000019341 magnesium sulphate Nutrition 0.000 description 2
- 238000012423 maintenance Methods 0.000 description 2
- 229940043353 maltol Drugs 0.000 description 2
- 235000001035 marshmallow Nutrition 0.000 description 2
- 208000008585 mastocytosis Diseases 0.000 description 2
- 230000001404 mediated effect Effects 0.000 description 2
- 238000002844 melting Methods 0.000 description 2
- 230000008018 melting Effects 0.000 description 2
- 108020004999 messenger RNA Proteins 0.000 description 2
- OSWPMRLSEDHDFF-UHFFFAOYSA-N methyl salicylate Chemical compound COC(=O)C1=CC=CC=C1O OSWPMRLSEDHDFF-UHFFFAOYSA-N 0.000 description 2
- LXCFILQKKLGQFO-UHFFFAOYSA-N methylparaben Chemical compound COC(=O)C1=CC=C(O)C=C1 LXCFILQKKLGQFO-UHFFFAOYSA-N 0.000 description 2
- 230000000813 microbial effect Effects 0.000 description 2
- 235000013379 molasses Nutrition 0.000 description 2
- 125000002950 monocyclic group Chemical group 0.000 description 2
- TXXHDPDFNKHHGW-UHFFFAOYSA-N muconic acid Chemical group OC(=O)C=CC=CC(O)=O TXXHDPDFNKHHGW-UHFFFAOYSA-N 0.000 description 2
- FUZZWVXGSFPDMH-UHFFFAOYSA-N n-hexanoic acid Natural products CCCCCC(O)=O FUZZWVXGSFPDMH-UHFFFAOYSA-N 0.000 description 2
- ITVGXXMINPYUHD-CUVHLRMHSA-N neohesperidin dihydrochalcone Chemical compound C1=C(O)C(OC)=CC=C1CCC(=O)C(C(=C1)O)=C(O)C=C1O[C@H]1[C@H](O[C@H]2[C@@H]([C@H](O)[C@@H](O)[C@H](C)O2)O)[C@@H](O)[C@H](O)[C@@H](CO)O1 ITVGXXMINPYUHD-CUVHLRMHSA-N 0.000 description 2
- 235000010434 neohesperidine DC Nutrition 0.000 description 2
- 239000000879 neohesperidine DC Substances 0.000 description 2
- 235000019412 neotame Nutrition 0.000 description 2
- HLIAVLHNDJUHFG-HOTGVXAUSA-N neotame Chemical compound CC(C)(C)CCN[C@@H](CC(O)=O)C(=O)N[C@H](C(=O)OC)CC1=CC=CC=C1 HLIAVLHNDJUHFG-HOTGVXAUSA-N 0.000 description 2
- 108010070257 neotame Proteins 0.000 description 2
- GLDOVTGHNKAZLK-UHFFFAOYSA-N octadecan-1-ol Chemical compound CCCCCCCCCCCCCCCCCCO GLDOVTGHNKAZLK-UHFFFAOYSA-N 0.000 description 2
- 235000021313 oleic acid Nutrition 0.000 description 2
- 230000003287 optical effect Effects 0.000 description 2
- 150000007530 organic bases Chemical class 0.000 description 2
- 230000001590 oxidative effect Effects 0.000 description 2
- 239000003002 pH adjusting agent Substances 0.000 description 2
- 239000005022 packaging material Substances 0.000 description 2
- 238000004806 packaging method and process Methods 0.000 description 2
- 238000012856 packing Methods 0.000 description 2
- 229960000292 pectin Drugs 0.000 description 2
- 230000003285 pharmacodynamic effect Effects 0.000 description 2
- 239000012071 phase Substances 0.000 description 2
- 235000011007 phosphoric acid Nutrition 0.000 description 2
- 229910052698 phosphorus Inorganic materials 0.000 description 2
- 239000011574 phosphorus Substances 0.000 description 2
- 102000020233 phosphotransferase Human genes 0.000 description 2
- BASFCYQUMIYNBI-UHFFFAOYSA-N platinum Chemical compound [Pt] BASFCYQUMIYNBI-UHFFFAOYSA-N 0.000 description 2
- 229920000191 poly(N-vinyl pyrrolidone) Polymers 0.000 description 2
- 238000006116 polymerization reaction Methods 0.000 description 2
- 229920001451 polypropylene glycol Polymers 0.000 description 2
- 229940068965 polysorbates Drugs 0.000 description 2
- 229920002744 polyvinyl acetate phthalate Polymers 0.000 description 2
- 239000011591 potassium Substances 0.000 description 2
- 229910052700 potassium Inorganic materials 0.000 description 2
- LWIHDJKSTIGBAC-UHFFFAOYSA-K potassium phosphate Substances [K+].[K+].[K+].[O-]P([O-])([O-])=O LWIHDJKSTIGBAC-UHFFFAOYSA-K 0.000 description 2
- 229920003124 powdered cellulose Polymers 0.000 description 2
- 235000019814 powdered cellulose Nutrition 0.000 description 2
- 230000002335 preservative effect Effects 0.000 description 2
- 230000000069 prophylactic effect Effects 0.000 description 2
- QELSKZZBTMNZEB-UHFFFAOYSA-N propylparaben Chemical compound CCCOC(=O)C1=CC=C(O)C=C1 QELSKZZBTMNZEB-UHFFFAOYSA-N 0.000 description 2
- 125000006239 protecting group Chemical group 0.000 description 2
- 125000004076 pyridyl group Chemical group 0.000 description 2
- 125000000168 pyrrolyl group Chemical group 0.000 description 2
- 150000003856 quaternary ammonium compounds Chemical class 0.000 description 2
- HELXLJCILKEWJH-NCGAPWICSA-N rebaudioside A Chemical compound O([C@H]1[C@H](O)[C@@H](CO)O[C@H]([C@@H]1O[C@H]1[C@@H]([C@@H](O)[C@H](O)[C@@H](CO)O1)O)O[C@]12C(=C)C[C@@]3(C1)CC[C@@H]1[C@@](C)(CCC[C@]1([C@@H]3CC2)C)C(=O)O[C@H]1[C@@H]([C@@H](O)[C@H](O)[C@@H](CO)O1)O)[C@@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O HELXLJCILKEWJH-NCGAPWICSA-N 0.000 description 2
- 238000001953 recrystallisation Methods 0.000 description 2
- 239000013037 reversible inhibitor Substances 0.000 description 2
- 125000006413 ring segment Chemical group 0.000 description 2
- 238000009490 roller compaction Methods 0.000 description 2
- 235000021572 root beer Nutrition 0.000 description 2
- 235000013533 rum Nutrition 0.000 description 2
- YGSDEFSMJLZEOE-UHFFFAOYSA-N salicylic acid Chemical group OC(=O)C1=CC=CC=C1O YGSDEFSMJLZEOE-UHFFFAOYSA-N 0.000 description 2
- 238000000926 separation method Methods 0.000 description 2
- 230000019491 signal transduction Effects 0.000 description 2
- 238000009097 single-agent therapy Methods 0.000 description 2
- 235000010378 sodium ascorbate Nutrition 0.000 description 2
- PPASLZSBLFJQEF-RKJRWTFHSA-M sodium ascorbate Substances [Na+].OC[C@@H](O)[C@H]1OC(=O)C(O)=C1[O-] PPASLZSBLFJQEF-RKJRWTFHSA-M 0.000 description 2
- 229960005055 sodium ascorbate Drugs 0.000 description 2
- 229910000029 sodium carbonate Inorganic materials 0.000 description 2
- 235000017550 sodium carbonate Nutrition 0.000 description 2
- 229940080237 sodium caseinate Drugs 0.000 description 2
- 229960002668 sodium chloride Drugs 0.000 description 2
- 235000011121 sodium hydroxide Nutrition 0.000 description 2
- RYYKJJJTJZKILX-UHFFFAOYSA-M sodium octadecanoate Chemical class [Na+].CCCCCCCCCCCCCCCCCC([O-])=O RYYKJJJTJZKILX-UHFFFAOYSA-M 0.000 description 2
- 229940080352 sodium stearoyl lactylate Drugs 0.000 description 2
- PPASLZSBLFJQEF-RXSVEWSESA-M sodium-L-ascorbate Chemical compound [Na+].OC[C@H](O)[C@H]1OC(=O)C(O)=C1[O-] PPASLZSBLFJQEF-RXSVEWSESA-M 0.000 description 2
- 239000007901 soft capsule Substances 0.000 description 2
- 239000008347 soybean phospholipid Substances 0.000 description 2
- 125000004079 stearyl group Chemical group [H]C([*])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])[H] 0.000 description 2
- 238000003860 storage Methods 0.000 description 2
- 238000007920 subcutaneous administration Methods 0.000 description 2
- KZNICNPSHKQLFF-UHFFFAOYSA-N succinimide Chemical compound O=C1CCC(=O)N1 KZNICNPSHKQLFF-UHFFFAOYSA-N 0.000 description 2
- 125000000475 sulfinyl group Chemical group [*:2]S([*:1])=O 0.000 description 2
- 230000002194 synthesizing effect Effects 0.000 description 2
- 235000010436 thaumatin Nutrition 0.000 description 2
- 239000000892 thaumatin Substances 0.000 description 2
- 238000002076 thermal analysis method Methods 0.000 description 2
- 238000002411 thermogravimetry Methods 0.000 description 2
- 125000001544 thienyl group Chemical group 0.000 description 2
- 125000003396 thiol group Chemical group [H]S* 0.000 description 2
- 235000010384 tocopherol Nutrition 0.000 description 2
- 229930003799 tocopherol Natural products 0.000 description 2
- 239000011732 tocopherol Substances 0.000 description 2
- 229960001295 tocopherol Drugs 0.000 description 2
- VZCYOOQTPOCHFL-UHFFFAOYSA-N trans-butenedioic acid Natural products OC(=O)C=CC(O)=O VZCYOOQTPOCHFL-UHFFFAOYSA-N 0.000 description 2
- 230000009466 transformation Effects 0.000 description 2
- 230000032258 transport Effects 0.000 description 2
- 150000003626 triacylglycerols Chemical class 0.000 description 2
- 235000013337 tricalcium citrate Nutrition 0.000 description 2
- 125000000876 trifluoromethoxy group Chemical group FC(F)(F)O* 0.000 description 2
- RIOQSEWOXXDEQQ-UHFFFAOYSA-N triphenylphosphine Chemical compound C1=CC=CC=C1P(C=1C=CC=CC=1)C1=CC=CC=C1 RIOQSEWOXXDEQQ-UHFFFAOYSA-N 0.000 description 2
- LENZDBCJOHFCAS-UHFFFAOYSA-N tris Chemical compound OCC(N)(CO)CO LENZDBCJOHFCAS-UHFFFAOYSA-N 0.000 description 2
- MDYZKJNTKZIUSK-UHFFFAOYSA-N tyloxapol Chemical compound O=C.C1CO1.CC(C)(C)CC(C)(C)C1=CC=C(O)C=C1 MDYZKJNTKZIUSK-UHFFFAOYSA-N 0.000 description 2
- 229920001664 tyloxapol Polymers 0.000 description 2
- 229960004224 tyloxapol Drugs 0.000 description 2
- 235000020234 walnut Nutrition 0.000 description 2
- 238000005550 wet granulation Methods 0.000 description 2
- UHVMMEOXYDMDKI-JKYCWFKZSA-L zinc;1-(5-cyanopyridin-2-yl)-3-[(1s,2s)-2-(6-fluoro-2-hydroxy-3-propanoylphenyl)cyclopropyl]urea;diacetate Chemical compound [Zn+2].CC([O-])=O.CC([O-])=O.CCC(=O)C1=CC=C(F)C([C@H]2[C@H](C2)NC(=O)NC=2N=CC(=CC=2)C#N)=C1O UHVMMEOXYDMDKI-JKYCWFKZSA-L 0.000 description 2
- GVJHHUAWPYXKBD-IEOSBIPESA-N α-tocopherol Chemical compound OC1=C(C)C(C)=C2O[C@@](CCC[C@H](C)CCC[C@H](C)CCCC(C)C)(C)CCC2=C1C GVJHHUAWPYXKBD-IEOSBIPESA-N 0.000 description 2
- QYYZXEPEVBXNNA-QGZVFWFLSA-N (1R)-2-acetyl-N-[4-(1,1,1,3,3,3-hexafluoro-2-hydroxypropan-2-yl)phenyl]-5-methylsulfonyl-1,3-dihydroisoindole-1-carboxamide Chemical compound C(C)(=O)N1[C@H](C2=CC=C(C=C2C1)S(=O)(=O)C)C(=O)NC1=CC=C(C=C1)C(C(F)(F)F)(C(F)(F)F)O QYYZXEPEVBXNNA-QGZVFWFLSA-N 0.000 description 1
- QBYIENPQHBMVBV-HFEGYEGKSA-N (2R)-2-hydroxy-2-phenylacetic acid Chemical compound O[C@@H](C(O)=O)c1ccccc1.O[C@@H](C(O)=O)c1ccccc1 QBYIENPQHBMVBV-HFEGYEGKSA-N 0.000 description 1
- JNYAEWCLZODPBN-JGWLITMVSA-N (2r,3r,4s)-2-[(1r)-1,2-dihydroxyethyl]oxolane-3,4-diol Chemical compound OC[C@@H](O)[C@H]1OC[C@H](O)[C@H]1O JNYAEWCLZODPBN-JGWLITMVSA-N 0.000 description 1
- WJTCHBVEUFDSIK-NWDGAFQWSA-N (2r,5s)-1-benzyl-2,5-dimethylpiperazine Chemical compound C[C@@H]1CN[C@@H](C)CN1CC1=CC=CC=C1 WJTCHBVEUFDSIK-NWDGAFQWSA-N 0.000 description 1
- FELGMEQIXOGIFQ-CYBMUJFWSA-N (3r)-9-methyl-3-[(2-methylimidazol-1-yl)methyl]-2,3-dihydro-1h-carbazol-4-one Chemical compound CC1=NC=CN1C[C@@H]1C(=O)C(C=2C(=CC=CC=2)N2C)=C2CC1 FELGMEQIXOGIFQ-CYBMUJFWSA-N 0.000 description 1
- MEJYDZQQVZJMPP-ULAWRXDQSA-N (3s,3ar,6r,6ar)-3,6-dimethoxy-2,3,3a,5,6,6a-hexahydrofuro[3,2-b]furan Chemical compound CO[C@H]1CO[C@@H]2[C@H](OC)CO[C@@H]21 MEJYDZQQVZJMPP-ULAWRXDQSA-N 0.000 description 1
- 125000006732 (C1-C15) alkyl group Chemical group 0.000 description 1
- 125000000229 (C1-C4)alkoxy group Chemical group 0.000 description 1
- 125000004209 (C1-C8) alkyl group Chemical group 0.000 description 1
- 125000006650 (C2-C4) alkynyl group Chemical group 0.000 description 1
- 125000006313 (C5-C8) alkyl group Chemical group 0.000 description 1
- BJEPYKJPYRNKOW-REOHCLBHSA-N (S)-malic acid Chemical compound OC(=O)[C@@H](O)CC(O)=O BJEPYKJPYRNKOW-REOHCLBHSA-N 0.000 description 1
- WBYWAXJHAXSJNI-VOTSOKGWSA-M .beta-Phenylacrylic acid Natural products [O-]C(=O)\C=C\C1=CC=CC=C1 WBYWAXJHAXSJNI-VOTSOKGWSA-M 0.000 description 1
- CIISBYKBBMFLEZ-UHFFFAOYSA-N 1,2-oxazolidine Chemical compound C1CNOC1 CIISBYKBBMFLEZ-UHFFFAOYSA-N 0.000 description 1
- LKLLNYWECKEQIB-UHFFFAOYSA-N 1,3,5-triazinane Chemical compound C1NCNCN1 LKLLNYWECKEQIB-UHFFFAOYSA-N 0.000 description 1
- BGJSXRVXTHVRSN-UHFFFAOYSA-N 1,3,5-trioxane Chemical compound C1OCOCO1 BGJSXRVXTHVRSN-UHFFFAOYSA-N 0.000 description 1
- 125000005871 1,3-benzodioxolyl group Chemical group 0.000 description 1
- VDFVNEFVBPFDSB-UHFFFAOYSA-N 1,3-dioxane Chemical compound C1COCOC1 VDFVNEFVBPFDSB-UHFFFAOYSA-N 0.000 description 1
- WNXJIVFYUVYPPR-UHFFFAOYSA-N 1,3-dioxolane Chemical compound C1COCO1 WNXJIVFYUVYPPR-UHFFFAOYSA-N 0.000 description 1
- ABADUMLIAZCWJD-UHFFFAOYSA-N 1,3-dioxole Chemical compound C1OC=CO1 ABADUMLIAZCWJD-UHFFFAOYSA-N 0.000 description 1
- IMLSAISZLJGWPP-UHFFFAOYSA-N 1,3-dithiolane Chemical compound C1CSCS1 IMLSAISZLJGWPP-UHFFFAOYSA-N 0.000 description 1
- IVJFXSLMUSQZMC-UHFFFAOYSA-N 1,3-dithiole Chemical compound C1SC=CS1 IVJFXSLMUSQZMC-UHFFFAOYSA-N 0.000 description 1
- QVFHFKPGBODJJB-UHFFFAOYSA-N 1,3-oxathiane Chemical compound C1COCSC1 QVFHFKPGBODJJB-UHFFFAOYSA-N 0.000 description 1
- WJJSZTJGFCFNKI-UHFFFAOYSA-N 1,3-oxathiolane Chemical compound C1CSCO1 WJJSZTJGFCFNKI-UHFFFAOYSA-N 0.000 description 1
- OGYGFUAIIOPWQD-UHFFFAOYSA-N 1,3-thiazolidine Chemical compound C1CSCN1 OGYGFUAIIOPWQD-UHFFFAOYSA-N 0.000 description 1
- KVGZZAHHUNAVKZ-UHFFFAOYSA-N 1,4-Dioxin Chemical compound O1C=COC=C1 KVGZZAHHUNAVKZ-UHFFFAOYSA-N 0.000 description 1
- 125000005877 1,4-benzodioxanyl group Chemical group 0.000 description 1
- JBYHSSAVUBIJMK-UHFFFAOYSA-N 1,4-oxathiane Chemical compound C1CSCCO1 JBYHSSAVUBIJMK-UHFFFAOYSA-N 0.000 description 1
- CPRVXMQHLPTWLY-UHFFFAOYSA-N 1,4-oxathiine Chemical compound O1C=CSC=C1 CPRVXMQHLPTWLY-UHFFFAOYSA-N 0.000 description 1
- HJTAZXHBEBIQQX-UHFFFAOYSA-N 1,5-bis(chloromethyl)naphthalene Chemical compound C1=CC=C2C(CCl)=CC=CC2=C1CCl HJTAZXHBEBIQQX-UHFFFAOYSA-N 0.000 description 1
- WDQFELCEOPFLCZ-UHFFFAOYSA-N 1-(2-hydroxyethyl)pyrrolidin-2-one Chemical compound OCCN1CCCC1=O WDQFELCEOPFLCZ-UHFFFAOYSA-N 0.000 description 1
- VXNZUUAINFGPBY-UHFFFAOYSA-N 1-Butene Chemical group CCC=C VXNZUUAINFGPBY-UHFFFAOYSA-N 0.000 description 1
- 102100025573 1-alkyl-2-acetylglycerophosphocholine esterase Human genes 0.000 description 1
- 125000004973 1-butenyl group Chemical group C(=CCC)* 0.000 description 1
- AMMPLVWPWSYRDR-UHFFFAOYSA-N 1-methylbicyclo[2.2.2]oct-2-ene-4-carboxylic acid Chemical compound C1CC2(C(O)=O)CCC1(C)C=C2 AMMPLVWPWSYRDR-UHFFFAOYSA-N 0.000 description 1
- 125000004206 2,2,2-trifluoroethyl group Chemical group [H]C([H])(*)C(F)(F)F 0.000 description 1
- SFCPXHKCMRZQAC-UHFFFAOYSA-N 2,3-dihydroxypropyl benzoate Chemical compound OCC(O)COC(=O)C1=CC=CC=C1 SFCPXHKCMRZQAC-UHFFFAOYSA-N 0.000 description 1
- CHHHXKFHOYLYRE-UHFFFAOYSA-M 2,4-Hexadienoic acid, potassium salt (1:1), (2E,4E)- Chemical compound [K+].CC=CC=CC([O-])=O CHHHXKFHOYLYRE-UHFFFAOYSA-M 0.000 description 1
- CTPDSKVQLSDPLC-UHFFFAOYSA-N 2-(oxolan-2-ylmethoxy)ethanol Chemical compound OCCOCC1CCCO1 CTPDSKVQLSDPLC-UHFFFAOYSA-N 0.000 description 1
- LBLYYCQCTBFVLH-UHFFFAOYSA-N 2-Methylbenzenesulfonic acid Chemical compound CC1=CC=CC=C1S(O)(=O)=O LBLYYCQCTBFVLH-UHFFFAOYSA-N 0.000 description 1
- IZXIZTKNFFYFOF-UHFFFAOYSA-N 2-Oxazolidone Chemical compound O=C1NCCO1 IZXIZTKNFFYFOF-UHFFFAOYSA-N 0.000 description 1
- IMSODMZESSGVBE-UHFFFAOYSA-N 2-Oxazoline Chemical compound C1CN=CO1 IMSODMZESSGVBE-UHFFFAOYSA-N 0.000 description 1
- HNLXNOZHXNSSPN-UHFFFAOYSA-N 2-[2-[2-[2-[2-[2-[2-[4-(2,4,4-trimethylpentan-2-yl)phenoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethoxy]ethanol Chemical compound CC(C)(C)CC(C)(C)C1=CC=C(OCCOCCOCCOCCOCCOCCOCCO)C=C1 HNLXNOZHXNSSPN-UHFFFAOYSA-N 0.000 description 1
- CITHEXJVPOWHKC-UUWRZZSWSA-O 2-[[(2r)-2,3-di(tetradecanoyloxy)propoxy]-hydroxyphosphoryl]oxyethyl-trimethylazanium Chemical compound CCCCCCCCCCCCCC(=O)OC[C@H](COP(O)(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCCCCCCC CITHEXJVPOWHKC-UUWRZZSWSA-O 0.000 description 1
- 125000000954 2-hydroxyethyl group Chemical group [H]C([*])([H])C([H])([H])O[H] 0.000 description 1
- UPHOPMSGKZNELG-UHFFFAOYSA-N 2-hydroxynaphthalene-1-carboxylic acid Chemical group C1=CC=C2C(C(=O)O)=C(O)C=CC2=C1 UPHOPMSGKZNELG-UHFFFAOYSA-N 0.000 description 1
- HZLCGUXUOFWCCN-UHFFFAOYSA-N 2-hydroxynonadecane-1,2,3-tricarboxylic acid Chemical compound CCCCCCCCCCCCCCCCC(C(O)=O)C(O)(C(O)=O)CC(O)=O HZLCGUXUOFWCCN-UHFFFAOYSA-N 0.000 description 1
- WLAMNBDJUVNPJU-UHFFFAOYSA-N 2-methylbutyric acid Chemical compound CCC(C)C(O)=O WLAMNBDJUVNPJU-UHFFFAOYSA-N 0.000 description 1
- 125000003229 2-methylhexyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])* 0.000 description 1
- 125000006088 2-oxoazepinyl group Chemical group 0.000 description 1
- 125000003903 2-propenyl group Chemical group [H]C([*])([H])C([H])=C([H])[H] 0.000 description 1
- RSEBUVRVKCANEP-UHFFFAOYSA-N 2-pyrroline Chemical compound C1CC=CN1 RSEBUVRVKCANEP-UHFFFAOYSA-N 0.000 description 1
- RVBUGGBMJDPOST-UHFFFAOYSA-N 2-thiobarbituric acid Chemical compound O=C1CC(=O)NC(=S)N1 RVBUGGBMJDPOST-UHFFFAOYSA-N 0.000 description 1
- MGADZUXDNSDTHW-UHFFFAOYSA-N 2H-pyran Chemical compound C1OC=CC=C1 MGADZUXDNSDTHW-UHFFFAOYSA-N 0.000 description 1
- BCHZICNRHXRCHY-UHFFFAOYSA-N 2h-oxazine Chemical compound N1OC=CC=C1 BCHZICNRHXRCHY-UHFFFAOYSA-N 0.000 description 1
- XLZYKTYMLBOINK-UHFFFAOYSA-N 3-(4-hydroxybenzoyl)benzoic acid Chemical compound OC(=O)C1=CC=CC(C(=O)C=2C=CC(O)=CC=2)=C1 XLZYKTYMLBOINK-UHFFFAOYSA-N 0.000 description 1
- BMYNFMYTOJXKLE-UHFFFAOYSA-N 3-azaniumyl-2-hydroxypropanoate Chemical compound NCC(O)C(O)=O BMYNFMYTOJXKLE-UHFFFAOYSA-N 0.000 description 1
- ZRPLANDPDWYOMZ-UHFFFAOYSA-N 3-cyclopentylpropionic acid Chemical compound OC(=O)CCC1CCCC1 ZRPLANDPDWYOMZ-UHFFFAOYSA-N 0.000 description 1
- QOXOZONBQWIKDA-UHFFFAOYSA-N 3-hydroxypropyl Chemical group [CH2]CCO QOXOZONBQWIKDA-UHFFFAOYSA-N 0.000 description 1
- 125000003469 3-methylhexyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])(C([H])([H])[H])C([H])([H])C([H])([H])* 0.000 description 1
- WEQPBCSPRXFQQS-UHFFFAOYSA-N 4,5-dihydro-1,2-oxazole Chemical compound C1CC=NO1 WEQPBCSPRXFQQS-UHFFFAOYSA-N 0.000 description 1
- CYDQOEWLBCCFJZ-UHFFFAOYSA-N 4-(4-fluorophenyl)oxane-4-carboxylic acid Chemical compound C=1C=C(F)C=CC=1C1(C(=O)O)CCOCC1 CYDQOEWLBCCFJZ-UHFFFAOYSA-N 0.000 description 1
- HIQIXEFWDLTDED-UHFFFAOYSA-N 4-hydroxy-1-piperidin-4-ylpyrrolidin-2-one Chemical compound O=C1CC(O)CN1C1CCNCC1 HIQIXEFWDLTDED-UHFFFAOYSA-N 0.000 description 1
- SXIFAEWFOJETOA-UHFFFAOYSA-N 4-hydroxy-butyl Chemical group [CH2]CCCO SXIFAEWFOJETOA-UHFFFAOYSA-N 0.000 description 1
- 229940090248 4-hydroxybenzoic acid Drugs 0.000 description 1
- MRUWJENAYHTDQG-UHFFFAOYSA-N 4H-pyran Chemical compound C1C=COC=C1 MRUWJENAYHTDQG-UHFFFAOYSA-N 0.000 description 1
- UCZQXJKDCHCTAI-UHFFFAOYSA-N 4h-1,3-dioxine Chemical compound C1OCC=CO1 UCZQXJKDCHCTAI-UHFFFAOYSA-N 0.000 description 1
- XAUDJQYHKZQPEU-KVQBGUIXSA-N 5-aza-2'-deoxycytidine Chemical compound O=C1N=C(N)N=CN1[C@@H]1O[C@H](CO)[C@@H](O)C1 XAUDJQYHKZQPEU-KVQBGUIXSA-N 0.000 description 1
- WYWHKKSPHMUBEB-UHFFFAOYSA-N 6-Mercaptoguanine Natural products N1C(N)=NC(=S)C2=C1N=CN2 WYWHKKSPHMUBEB-UHFFFAOYSA-N 0.000 description 1
- STQGQHZAVUOBTE-UHFFFAOYSA-N 7-Cyan-hept-2t-en-4,6-diinsaeure Natural products C1=2C(O)=C3C(=O)C=4C(OC)=CC=CC=4C(=O)C3=C(O)C=2CC(O)(C(C)=O)CC1OC1CC(N)C(O)C(C)O1 STQGQHZAVUOBTE-UHFFFAOYSA-N 0.000 description 1
- 239000004925 Acrylic resin Substances 0.000 description 1
- 229920000178 Acrylic resin Polymers 0.000 description 1
- 206010000830 Acute leukaemia Diseases 0.000 description 1
- 239000005995 Aluminium silicate Substances 0.000 description 1
- 229940122531 Anaplastic lymphoma kinase inhibitor Drugs 0.000 description 1
- 206010002412 Angiocentric lymphomas Diseases 0.000 description 1
- 239000004475 Arginine Substances 0.000 description 1
- 108010024976 Asparaginase Proteins 0.000 description 1
- 108090000749 Aurora kinase B Proteins 0.000 description 1
- 208000023275 Autoimmune disease Diseases 0.000 description 1
- 208000032568 B-cell prolymphocytic leukaemia Diseases 0.000 description 1
- MLDQJTXFUGDVEO-UHFFFAOYSA-N BAY-43-9006 Chemical compound C1=NC(C(=O)NC)=CC(OC=2C=CC(NC(=O)NC=3C=C(C(Cl)=CC=3)C(F)(F)F)=CC=2)=C1 MLDQJTXFUGDVEO-UHFFFAOYSA-N 0.000 description 1
- BVKZGUZCCUSVTD-UHFFFAOYSA-M Bicarbonate Chemical compound OC([O-])=O BVKZGUZCCUSVTD-UHFFFAOYSA-M 0.000 description 1
- BTBUEUYNUDRHOZ-UHFFFAOYSA-N Borate Chemical compound [O-]B([O-])[O-] BTBUEUYNUDRHOZ-UHFFFAOYSA-N 0.000 description 1
- 208000023611 Burkitt leukaemia Diseases 0.000 description 1
- COVZYZSDYWQREU-UHFFFAOYSA-N Busulfan Chemical compound CS(=O)(=O)OCCCCOS(C)(=O)=O COVZYZSDYWQREU-UHFFFAOYSA-N 0.000 description 1
- 125000006519 CCH3 Chemical group 0.000 description 1
- WWZKQHOCKIZLMA-UHFFFAOYSA-N Caprylic acid Natural products CCCCCCCC(O)=O WWZKQHOCKIZLMA-UHFFFAOYSA-N 0.000 description 1
- LZZYPRNAOMGNLH-UHFFFAOYSA-M Cetrimonium bromide Chemical compound [Br-].CCCCCCCCCCCCCCCC[N+](C)(C)C LZZYPRNAOMGNLH-UHFFFAOYSA-M 0.000 description 1
- VEXZGXHMUGYJMC-UHFFFAOYSA-M Chloride anion Chemical compound [Cl-] VEXZGXHMUGYJMC-UHFFFAOYSA-M 0.000 description 1
- ZAMOUSCENKQFHK-UHFFFAOYSA-N Chlorine atom Chemical compound [Cl] ZAMOUSCENKQFHK-UHFFFAOYSA-N 0.000 description 1
- 239000004155 Chlorine dioxide Substances 0.000 description 1
- VYZAMTAEIAYCRO-UHFFFAOYSA-N Chromium Chemical compound [Cr] VYZAMTAEIAYCRO-UHFFFAOYSA-N 0.000 description 1
- WBYWAXJHAXSJNI-SREVYHEPSA-N Cinnamic acid Chemical compound OC(=O)\C=C/C1=CC=CC=C1 WBYWAXJHAXSJNI-SREVYHEPSA-N 0.000 description 1
- PTOAARAWEBMLNO-KVQBGUIXSA-N Cladribine Chemical compound C1=NC=2C(N)=NC(Cl)=NC=2N1[C@H]1C[C@H](O)[C@@H](CO)O1 PTOAARAWEBMLNO-KVQBGUIXSA-N 0.000 description 1
- 108010015742 Cytochrome P-450 Enzyme System Proteins 0.000 description 1
- 102000003849 Cytochrome P450 Human genes 0.000 description 1
- RGHNJXZEOKUKBD-UHFFFAOYSA-N D-gluconic acid Chemical group OCC(O)C(O)C(O)C(O)C(O)=O RGHNJXZEOKUKBD-UHFFFAOYSA-N 0.000 description 1
- YZCKVEUIGOORGS-OUBTZVSYSA-N Deuterium Chemical compound [2H] YZCKVEUIGOORGS-OUBTZVSYSA-N 0.000 description 1
- 206010061818 Disease progression Diseases 0.000 description 1
- CYQFCXCEBYINGO-DLBZAZTESA-N Dronabinol Natural products C1=C(C)CC[C@H]2C(C)(C)OC3=CC(CCCCC)=CC(O)=C3[C@H]21 CYQFCXCEBYINGO-DLBZAZTESA-N 0.000 description 1
- KCXVZYZYPLLWCC-UHFFFAOYSA-N EDTA Chemical compound OC(=O)CN(CC(O)=O)CCN(CC(O)=O)CC(O)=O KCXVZYZYPLLWCC-UHFFFAOYSA-N 0.000 description 1
- LVGKNOAMLMIIKO-UHFFFAOYSA-N Elaidinsaeure-aethylester Natural products CCCCCCCCC=CCCCCCCCC(=O)OCC LVGKNOAMLMIIKO-UHFFFAOYSA-N 0.000 description 1
- 241000196324 Embryophyta Species 0.000 description 1
- XEKOWRVHYACXOJ-UHFFFAOYSA-N Ethyl acetate Chemical compound CCOC(C)=O XEKOWRVHYACXOJ-UHFFFAOYSA-N 0.000 description 1
- HKVAMNSJSFKALM-GKUWKFKPSA-N Everolimus Chemical compound C1C[C@@H](OCCO)[C@H](OC)C[C@@H]1C[C@@H](C)[C@H]1OC(=O)[C@@H]2CCCCN2C(=O)C(=O)[C@](O)(O2)[C@H](C)CC[C@H]2C[C@H](OC)/C(C)=C/C=C/C=C/[C@@H](C)C[C@@H](C)C(=O)[C@H](OC)[C@H](O)/C(C)=C/[C@@H](C)C(=O)C1 HKVAMNSJSFKALM-GKUWKFKPSA-N 0.000 description 1
- 208000036307 FLT3 internal tandem duplication acute myeloid leukemia Diseases 0.000 description 1
- 108010029961 Filgrastim Proteins 0.000 description 1
- PXGOKWXKJXAPGV-UHFFFAOYSA-N Fluorine Chemical compound FF PXGOKWXKJXAPGV-UHFFFAOYSA-N 0.000 description 1
- GHASVSINZRGABV-UHFFFAOYSA-N Fluorouracil Chemical compound FC1=CNC(=O)NC1=O GHASVSINZRGABV-UHFFFAOYSA-N 0.000 description 1
- 238000005033 Fourier transform infrared spectroscopy Methods 0.000 description 1
- 102000016354 Glucuronosyltransferase Human genes 0.000 description 1
- 108010092364 Glucuronosyltransferase Proteins 0.000 description 1
- WHUUTDBJXJRKMK-UHFFFAOYSA-N Glutamic acid Chemical group OC(=O)C(N)CCC(O)=O WHUUTDBJXJRKMK-UHFFFAOYSA-N 0.000 description 1
- 239000004471 Glycine Substances 0.000 description 1
- 102100039619 Granulocyte colony-stimulating factor Human genes 0.000 description 1
- 108010009202 Growth Factor Receptors Proteins 0.000 description 1
- 102000009465 Growth Factor Receptors Human genes 0.000 description 1
- HTTJABKRGRZYRN-UHFFFAOYSA-N Heparin Chemical compound OC1C(NC(=O)C)C(O)OC(COS(O)(=O)=O)C1OC1C(OS(O)(=O)=O)C(O)C(OC2C(C(OS(O)(=O)=O)C(OC3C(C(O)C(O)C(O3)C(O)=O)OS(O)(=O)=O)C(CO)O2)NS(O)(=O)=O)C(C(O)=O)O1 HTTJABKRGRZYRN-UHFFFAOYSA-N 0.000 description 1
- 229920001499 Heparinoid Polymers 0.000 description 1
- SQUHHTBVTRBESD-UHFFFAOYSA-N Hexa-Ac-myo-Inositol Natural products CC(=O)OC1C(OC(C)=O)C(OC(C)=O)C(OC(C)=O)C(OC(C)=O)C1OC(C)=O SQUHHTBVTRBESD-UHFFFAOYSA-N 0.000 description 1
- 241000238631 Hexapoda Species 0.000 description 1
- 208000017604 Hodgkin disease Diseases 0.000 description 1
- 208000021519 Hodgkin lymphoma Diseases 0.000 description 1
- 208000010747 Hodgkins lymphoma Diseases 0.000 description 1
- 101000911952 Homo sapiens Cyclin-dependent kinase 7 Proteins 0.000 description 1
- XDXDZDZNSLXDNA-TZNDIEGXSA-N Idarubicin Chemical compound C1[C@H](N)[C@H](O)[C@H](C)O[C@H]1O[C@@H]1C2=C(O)C(C(=O)C3=CC=CC=C3C3=O)=C3C(O)=C2C[C@@](O)(C(C)=O)C1 XDXDZDZNSLXDNA-TZNDIEGXSA-N 0.000 description 1
- XDXDZDZNSLXDNA-UHFFFAOYSA-N Idarubicin Natural products C1C(N)C(O)C(C)OC1OC1C2=C(O)C(C(=O)C3=CC=CC=C3C3=O)=C3C(O)=C2CC(O)(C(C)=O)C1 XDXDZDZNSLXDNA-UHFFFAOYSA-N 0.000 description 1
- WRYCSMQKUKOKBP-UHFFFAOYSA-N Imidazolidine Chemical compound C1CNCN1 WRYCSMQKUKOKBP-UHFFFAOYSA-N 0.000 description 1
- 238000012695 Interfacial polymerization Methods 0.000 description 1
- 108010047761 Interferon-alpha Proteins 0.000 description 1
- 102000006992 Interferon-alpha Human genes 0.000 description 1
- 108010050904 Interferons Proteins 0.000 description 1
- 102000014150 Interferons Human genes 0.000 description 1
- WHUUTDBJXJRKMK-VKHMYHEASA-N L-glutamic acid Chemical group OC(=O)[C@@H](N)CCC(O)=O WHUUTDBJXJRKMK-VKHMYHEASA-N 0.000 description 1
- FFEARJCKVFRZRR-BYPYZUCNSA-N L-methionine Chemical compound CSCC[C@H](N)C(O)=O FFEARJCKVFRZRR-BYPYZUCNSA-N 0.000 description 1
- FBOZXECLQNJBKD-ZDUSSCGKSA-N L-methotrexate Chemical compound C=1N=C2N=C(N)N=C(N)C2=NC=1CN(C)C1=CC=C(C(=O)N[C@@H](CCC(O)=O)C(O)=O)C=C1 FBOZXECLQNJBKD-ZDUSSCGKSA-N 0.000 description 1
- 239000005517 L01XE01 - Imatinib Substances 0.000 description 1
- 239000002147 L01XE04 - Sunitinib Substances 0.000 description 1
- 239000005511 L01XE05 - Sorafenib Substances 0.000 description 1
- 239000002137 L01XE24 - Ponatinib Substances 0.000 description 1
- UIARLYUEJFELEN-LROUJFHJSA-N LSM-1231 Chemical compound C12=C3N4C5=CC=CC=C5C3=C3C(=O)NCC3=C2C2=CC=CC=C2N1[C@]1(C)[C@](CO)(O)C[C@H]4O1 UIARLYUEJFELEN-LROUJFHJSA-N 0.000 description 1
- WHXSMMKQMYFTQS-UHFFFAOYSA-N Lithium Chemical compound [Li] WHXSMMKQMYFTQS-UHFFFAOYSA-N 0.000 description 1
- 239000012448 Lithium borohydride Substances 0.000 description 1
- 206010052178 Lymphocytic lymphoma Diseases 0.000 description 1
- 201000003791 MALT lymphoma Diseases 0.000 description 1
- 235000019759 Maize starch Nutrition 0.000 description 1
- PEEHTFAAVSWFBL-UHFFFAOYSA-N Maleimide Chemical compound O=C1NC(=O)C=C1 PEEHTFAAVSWFBL-UHFFFAOYSA-N 0.000 description 1
- 208000025205 Mantle-Cell Lymphoma Diseases 0.000 description 1
- UEZVMMHDMIWARA-UHFFFAOYSA-N Metaphosphoric acid Chemical compound OP(=O)=O UEZVMMHDMIWARA-UHFFFAOYSA-N 0.000 description 1
- 238000006957 Michael reaction Methods 0.000 description 1
- TXXHDPDFNKHHGW-CCAGOZQPSA-N Muconic acid Chemical group OC(=O)\C=C/C=C\C(O)=O TXXHDPDFNKHHGW-CCAGOZQPSA-N 0.000 description 1
- 101000753280 Mus musculus Angiopoietin-1 receptor Proteins 0.000 description 1
- FXHOOIRPVKKKFG-UHFFFAOYSA-N N,N-Dimethylacetamide Chemical compound CN(C)C(C)=O FXHOOIRPVKKKFG-UHFFFAOYSA-N 0.000 description 1
- SECXISVLQFMRJM-UHFFFAOYSA-N N-Methylpyrrolidone Chemical compound CN1CCCC1=O SECXISVLQFMRJM-UHFFFAOYSA-N 0.000 description 1
- MBBZMMPHUWSWHV-BDVNFPICSA-N N-methylglucamine Chemical compound CNC[C@H](O)[C@@H](O)[C@H](O)[C@H](O)CO MBBZMMPHUWSWHV-BDVNFPICSA-N 0.000 description 1
- GRYLNZFGIOXLOG-UHFFFAOYSA-N Nitric acid Chemical compound O[N+]([O-])=O GRYLNZFGIOXLOG-UHFFFAOYSA-N 0.000 description 1
- JCXJVPUVTGWSNB-UHFFFAOYSA-N Nitrogen dioxide Chemical compound O=[N]=O JCXJVPUVTGWSNB-UHFFFAOYSA-N 0.000 description 1
- 206010029461 Nodal marginal zone B-cell lymphomas Diseases 0.000 description 1
- 208000015914 Non-Hodgkin lymphomas Diseases 0.000 description 1
- 229910003849 O-Si Inorganic materials 0.000 description 1
- 229910004749 OS(O)2 Inorganic materials 0.000 description 1
- 108700026244 Open Reading Frames Proteins 0.000 description 1
- WYNCHZVNFNFDNH-UHFFFAOYSA-N Oxazolidine Chemical compound C1COCN1 WYNCHZVNFNFDNH-UHFFFAOYSA-N 0.000 description 1
- 229910003872 O—Si Inorganic materials 0.000 description 1
- 239000008118 PEG 6000 Substances 0.000 description 1
- 229910019142 PO4 Inorganic materials 0.000 description 1
- 229930012538 Paclitaxel Natural products 0.000 description 1
- LGRFSURHDFAFJT-UHFFFAOYSA-N Phthalic anhydride Natural products C1=CC=C2C(=O)OC(=O)C2=C1 LGRFSURHDFAFJT-UHFFFAOYSA-N 0.000 description 1
- 208000007452 Plasmacytoma Diseases 0.000 description 1
- 229920002584 Polyethylene Glycol 6000 Polymers 0.000 description 1
- 229920000954 Polyglycolide Polymers 0.000 description 1
- 206010065857 Primary Effusion Lymphoma Diseases 0.000 description 1
- 206010036711 Primary mediastinal large B-cell lymphomas Diseases 0.000 description 1
- 208000035416 Prolymphocytic B-Cell Leukemia Diseases 0.000 description 1
- KYQCOXFCLRTKLS-UHFFFAOYSA-N Pyrazine Chemical class C1=CN=CC=N1 KYQCOXFCLRTKLS-UHFFFAOYSA-N 0.000 description 1
- IWYDHOAUDWTVEP-UHFFFAOYSA-N R-2-phenyl-2-hydroxyacetic acid Natural products OC(=O)C(O)C1=CC=CC=C1 IWYDHOAUDWTVEP-UHFFFAOYSA-N 0.000 description 1
- 238000001530 Raman microscopy Methods 0.000 description 1
- 238000001069 Raman spectroscopy Methods 0.000 description 1
- 241000700159 Rattus Species 0.000 description 1
- 229920001800 Shellac Polymers 0.000 description 1
- 229910007161 Si(CH3)3 Inorganic materials 0.000 description 1
- UIIMBOGNXHQVGW-DEQYMQKBSA-M Sodium bicarbonate-14C Chemical compound [Na+].O[14C]([O-])=O UIIMBOGNXHQVGW-DEQYMQKBSA-M 0.000 description 1
- DWAQJAXMDSEUJJ-UHFFFAOYSA-M Sodium bisulfite Chemical compound [Na+].OS([O-])=O DWAQJAXMDSEUJJ-UHFFFAOYSA-M 0.000 description 1
- 229930182558 Sterol Natural products 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-N Succinic acid Natural products OC(=O)CCC(O)=O KDYFGRWQOYBRFD-UHFFFAOYSA-N 0.000 description 1
- QAOWNCQODCNURD-UHFFFAOYSA-L Sulfate Chemical compound [O-]S([O-])(=O)=O QAOWNCQODCNURD-UHFFFAOYSA-L 0.000 description 1
- CYQFCXCEBYINGO-UHFFFAOYSA-N THC Natural products C1=C(C)CCC2C(C)(C)OC3=CC(CCCCC)=CC(O)=C3C21 CYQFCXCEBYINGO-UHFFFAOYSA-N 0.000 description 1
- 239000005463 Tandutinib Substances 0.000 description 1
- WBWWGRHZICKQGZ-UHFFFAOYSA-N Taurocholic acid Natural products OC1CC2CC(O)CCC2(C)C2C1C1CCC(C(CCC(=O)NCCS(O)(=O)=O)C)C1(C)C(O)C2 WBWWGRHZICKQGZ-UHFFFAOYSA-N 0.000 description 1
- BPEGJWRSRHCHSN-UHFFFAOYSA-N Temozolomide Chemical compound O=C1N(C)N=NC2=C(C(N)=O)N=CN21 BPEGJWRSRHCHSN-UHFFFAOYSA-N 0.000 description 1
- DHXVGJBLRPWPCS-UHFFFAOYSA-N Tetrahydropyran Chemical compound C1CCOCC1 DHXVGJBLRPWPCS-UHFFFAOYSA-N 0.000 description 1
- YPWFISCTZQNZAU-UHFFFAOYSA-N Thiane Chemical compound C1CCSCC1 YPWFISCTZQNZAU-UHFFFAOYSA-N 0.000 description 1
- 101710183280 Topoisomerase Proteins 0.000 description 1
- XCCTYIAWTASOJW-XVFCMESISA-N Uridine-5'-Diphosphate Chemical compound O[C@@H]1[C@H](O)[C@@H](COP(O)(=O)OP(O)(O)=O)O[C@H]1N1C(=O)NC(=O)C=C1 XCCTYIAWTASOJW-XVFCMESISA-N 0.000 description 1
- 208000033559 Waldenström macroglobulinemia Diseases 0.000 description 1
- ATBOMIWRCZXYSZ-XZBBILGWSA-N [1-[2,3-dihydroxypropoxy(hydroxy)phosphoryl]oxy-3-hexadecanoyloxypropan-2-yl] (9e,12e)-octadeca-9,12-dienoate Chemical compound CCCCCCCCCCCCCCCC(=O)OCC(COP(O)(=O)OCC(O)CO)OC(=O)CCCCCCC\C=C\C\C=C\CCCCC ATBOMIWRCZXYSZ-XZBBILGWSA-N 0.000 description 1
- GPWHDDKQSYOYBF-UHFFFAOYSA-N ac1l2u0q Chemical compound Br[Br-]Br GPWHDDKQSYOYBF-UHFFFAOYSA-N 0.000 description 1
- 239000000205 acacia gum Substances 0.000 description 1
- 150000001242 acetic acid derivatives Chemical class 0.000 description 1
- 125000002777 acetyl group Chemical group [H]C([H])([H])C(*)=O 0.000 description 1
- 125000000641 acridinyl group Chemical group C1(=CC=CC2=NC3=CC=CC=C3C=C12)* 0.000 description 1
- 239000012190 activator Substances 0.000 description 1
- 125000002252 acyl group Chemical group 0.000 description 1
- 125000004423 acyloxy group Chemical group 0.000 description 1
- 125000005073 adamantyl group Chemical group C12(CC3CC(CC(C1)C3)C2)* 0.000 description 1
- 229940040563 agaric acid Drugs 0.000 description 1
- 150000001298 alcohols Chemical class 0.000 description 1
- IAJILQKETJEXLJ-QTBDOELSSA-N aldehydo-D-glucuronic acid Chemical class O=C[C@H](O)[C@@H](O)[C@H](O)[C@H](O)C(O)=O IAJILQKETJEXLJ-QTBDOELSSA-N 0.000 description 1
- 229960000548 alemtuzumab Drugs 0.000 description 1
- 229910001413 alkali metal ion Inorganic materials 0.000 description 1
- 125000003302 alkenyloxy group Chemical group 0.000 description 1
- 125000004183 alkoxy alkyl group Chemical group 0.000 description 1
- 125000000278 alkyl amino alkyl group Chemical group 0.000 description 1
- 150000005215 alkyl ethers Chemical class 0.000 description 1
- 125000006350 alkyl thio alkyl group Chemical group 0.000 description 1
- 125000004414 alkyl thio group Chemical group 0.000 description 1
- SHGAZHPCJJPHSC-YCNIQYBTSA-N all-trans-retinoic acid Chemical compound OC(=O)\C=C(/C)\C=C\C=C(/C)\C=C\C1=C(C)CCCC1(C)C SHGAZHPCJJPHSC-YCNIQYBTSA-N 0.000 description 1
- 229960003459 allopurinol Drugs 0.000 description 1
- OFCNXPDARWKPPY-UHFFFAOYSA-N allopurinol Chemical compound OC1=NC=NC2=C1C=NN2 OFCNXPDARWKPPY-UHFFFAOYSA-N 0.000 description 1
- AWUCVROLDVIAJX-UHFFFAOYSA-N alpha-glycerophosphate Natural products OCC(O)COP(O)(O)=O AWUCVROLDVIAJX-UHFFFAOYSA-N 0.000 description 1
- BJEPYKJPYRNKOW-UHFFFAOYSA-N alpha-hydroxysuccinic acid Natural products OC(=O)C(O)CC(O)=O BJEPYKJPYRNKOW-UHFFFAOYSA-N 0.000 description 1
- WNROFYMDJYEPJX-UHFFFAOYSA-K aluminium hydroxide Chemical compound [OH-].[OH-].[OH-].[Al+3] WNROFYMDJYEPJX-UHFFFAOYSA-K 0.000 description 1
- 229910000147 aluminium phosphate Inorganic materials 0.000 description 1
- 235000012211 aluminium silicate Nutrition 0.000 description 1
- 125000003277 amino group Chemical group 0.000 description 1
- 235000019270 ammonium chloride Nutrition 0.000 description 1
- 150000003863 ammonium salts Chemical class 0.000 description 1
- BFNBIHQBYMNNAN-UHFFFAOYSA-N ammonium sulfate Chemical compound N.N.OS(O)(=O)=O BFNBIHQBYMNNAN-UHFFFAOYSA-N 0.000 description 1
- 229910052921 ammonium sulfate Inorganic materials 0.000 description 1
- 235000011130 ammonium sulphate Nutrition 0.000 description 1
- 229960004977 anhydrous lactose Drugs 0.000 description 1
- 229920006318 anionic polymer Polymers 0.000 description 1
- 230000002280 anti-androgenic effect Effects 0.000 description 1
- 229940046836 anti-estrogen Drugs 0.000 description 1
- 230000001833 anti-estrogenic effect Effects 0.000 description 1
- 239000000051 antiandrogen Substances 0.000 description 1
- 230000003078 antioxidant effect Effects 0.000 description 1
- ODKSFYDXXFIFQN-UHFFFAOYSA-N arginine Natural products OC(=O)C(N)CCCNC(N)=N ODKSFYDXXFIFQN-UHFFFAOYSA-N 0.000 description 1
- GOLCXWYRSKYTSP-UHFFFAOYSA-N arsenic trioxide Inorganic materials O1[As]2O[As]1O2 GOLCXWYRSKYTSP-UHFFFAOYSA-N 0.000 description 1
- 150000005840 aryl radicals Chemical class 0.000 description 1
- 125000004104 aryloxy group Chemical group 0.000 description 1
- 229940072107 ascorbate Drugs 0.000 description 1
- 229960003272 asparaginase Drugs 0.000 description 1
- DCXYFEDJOCDNAF-UHFFFAOYSA-M asparaginate Chemical compound [O-]C(=O)C(N)CC(N)=O DCXYFEDJOCDNAF-UHFFFAOYSA-M 0.000 description 1
- 239000012298 atmosphere Substances 0.000 description 1
- 238000001479 atomic absorption spectroscopy Methods 0.000 description 1
- 238000001593 atomic mass spectrometry Methods 0.000 description 1
- 210000003719 b-lymphocyte Anatomy 0.000 description 1
- HNYOPLTXPVRDBG-UHFFFAOYSA-N barbituric acid Chemical compound O=C1CC(=O)NC(=O)N1 HNYOPLTXPVRDBG-UHFFFAOYSA-N 0.000 description 1
- 230000004888 barrier function Effects 0.000 description 1
- OGBUMNBNEWYMNJ-UHFFFAOYSA-N batilol Chemical class CCCCCCCCCCCCCCCCCCOCC(O)CO OGBUMNBNEWYMNJ-UHFFFAOYSA-N 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- SRSXLGNVWSONIS-UHFFFAOYSA-N benzenesulfonic acid Chemical compound OS(=O)(=O)C1=CC=CC=C1 SRSXLGNVWSONIS-UHFFFAOYSA-N 0.000 description 1
- 229940092714 benzenesulfonic acid Drugs 0.000 description 1
- 125000003785 benzimidazolyl group Chemical group N1=C(NC2=C1C=CC=C2)* 0.000 description 1
- 125000005870 benzindolyl group Chemical group 0.000 description 1
- 125000005605 benzo group Chemical group 0.000 description 1
- 125000005875 benzo[b][1,4]dioxepinyl group Chemical group 0.000 description 1
- 125000005876 benzo[b][1,4]oxazinyl group Chemical group 0.000 description 1
- 125000005873 benzo[d]thiazolyl group Chemical group 0.000 description 1
- 125000000928 benzodioxinyl group Chemical group O1C(=COC2=C1C=CC=C2)* 0.000 description 1
- 125000002047 benzodioxolyl group Chemical group O1OC(C2=C1C=CC=C2)* 0.000 description 1
- 125000005878 benzonaphthofuranyl group Chemical group 0.000 description 1
- 125000005872 benzooxazolyl group Chemical group 0.000 description 1
- 125000004619 benzopyranyl group Chemical group O1C(C=CC2=C1C=CC=C2)* 0.000 description 1
- 125000005874 benzothiadiazolyl group Chemical group 0.000 description 1
- 125000003354 benzotriazolyl group Chemical group N1N=NC2=C1C=CC=C2* 0.000 description 1
- 125000004541 benzoxazolyl group Chemical group O1C(=NC2=C1C=CC=C2)* 0.000 description 1
- GONOPSZTUGRENK-UHFFFAOYSA-N benzyl(trichloro)silane Chemical compound Cl[Si](Cl)(Cl)CC1=CC=CC=C1 GONOPSZTUGRENK-UHFFFAOYSA-N 0.000 description 1
- 125000000649 benzylidene group Chemical group [H]C(=[*])C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- 229960000397 bevacizumab Drugs 0.000 description 1
- BVCRERJDOOBZOH-UHFFFAOYSA-N bicyclo[2.2.1]heptanyl Chemical group C1C[C+]2CC[C-]1C2 BVCRERJDOOBZOH-UHFFFAOYSA-N 0.000 description 1
- 238000010256 biochemical assay Methods 0.000 description 1
- 238000002306 biochemical method Methods 0.000 description 1
- 239000013060 biological fluid Substances 0.000 description 1
- 230000008512 biological response Effects 0.000 description 1
- 239000007893 bite-disintegration tablet Substances 0.000 description 1
- 210000004204 blood vessel Anatomy 0.000 description 1
- 229910021538 borax Inorganic materials 0.000 description 1
- GXJABQQUPOEUTA-RDJZCZTQSA-N bortezomib Chemical compound C([C@@H](C(=O)N[C@@H](CC(C)C)B(O)O)NC(=O)C=1N=CC=NC=1)C1=CC=CC=C1 GXJABQQUPOEUTA-RDJZCZTQSA-N 0.000 description 1
- 229960001467 bortezomib Drugs 0.000 description 1
- 125000001246 bromo group Chemical group Br* 0.000 description 1
- 239000008366 buffered solution Substances 0.000 description 1
- 239000006172 buffering agent Substances 0.000 description 1
- 229960002092 busulfan Drugs 0.000 description 1
- KDYFGRWQOYBRFD-NUQCWPJISA-N butanedioic acid Chemical compound O[14C](=O)CC[14C](O)=O KDYFGRWQOYBRFD-NUQCWPJISA-N 0.000 description 1
- JHIWVOJDXOSYLW-UHFFFAOYSA-N butyl 2,2-difluorocyclopropane-1-carboxylate Chemical compound CCCCOC(=O)C1CC1(F)F JHIWVOJDXOSYLW-UHFFFAOYSA-N 0.000 description 1
- 229940067596 butylparaben Drugs 0.000 description 1
- 125000000480 butynyl group Chemical group [*]C#CC([H])([H])C([H])([H])[H] 0.000 description 1
- UBWYRXFZPXBISJ-UHFFFAOYSA-L calcium;2-hydroxypropanoate;trihydrate Chemical compound O.O.O.[Ca+2].CC(O)C([O-])=O.CC(O)C([O-])=O UBWYRXFZPXBISJ-UHFFFAOYSA-L 0.000 description 1
- ZHZFKLKREFECML-UHFFFAOYSA-L calcium;sulfate;hydrate Chemical compound O.[Ca+2].[O-]S([O-])(=O)=O ZHZFKLKREFECML-UHFFFAOYSA-L 0.000 description 1
- 238000005251 capillar electrophoresis Methods 0.000 description 1
- 239000007894 caplet Substances 0.000 description 1
- 239000007963 capsule composition Substances 0.000 description 1
- 125000003917 carbamoyl group Chemical group [H]N([H])C(*)=O 0.000 description 1
- 125000000609 carbazolyl group Chemical group C1(=CC=CC=2C3=CC=CC=C3NC12)* 0.000 description 1
- 125000005884 carbocyclylalkyl group Chemical group 0.000 description 1
- 150000001720 carbohydrates Chemical class 0.000 description 1
- 235000014633 carbohydrates Nutrition 0.000 description 1
- 150000001722 carbon compounds Chemical class 0.000 description 1
- 125000002915 carbonyl group Chemical group [*:2]C([*:1])=O 0.000 description 1
- 150000001732 carboxylic acid derivatives Chemical class 0.000 description 1
- 150000001735 carboxylic acids Chemical class 0.000 description 1
- 150000001768 cations Chemical class 0.000 description 1
- 210000000170 cell membrane Anatomy 0.000 description 1
- 230000004663 cell proliferation Effects 0.000 description 1
- 229920002301 cellulose acetate Polymers 0.000 description 1
- 229920003086 cellulose ether Polymers 0.000 description 1
- 229920006184 cellulose methylcellulose Polymers 0.000 description 1
- 235000013339 cereals Nutrition 0.000 description 1
- 229960005395 cetuximab Drugs 0.000 description 1
- 229960000541 cetyl alcohol Drugs 0.000 description 1
- 229960001927 cetylpyridinium chloride Drugs 0.000 description 1
- NFCRBQADEGXVDL-UHFFFAOYSA-M cetylpyridinium chloride monohydrate Chemical compound O.[Cl-].CCCCCCCCCCCCCCCC[N+]1=CC=CC=C1 NFCRBQADEGXVDL-UHFFFAOYSA-M 0.000 description 1
- 230000008859 change Effects 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- 239000002738 chelating agent Substances 0.000 description 1
- 238000002144 chemical decomposition reaction Methods 0.000 description 1
- 150000005829 chemical entities Chemical class 0.000 description 1
- 238000001311 chemical methods and process Methods 0.000 description 1
- 239000003638 chemical reducing agent Substances 0.000 description 1
- 235000019398 chlorine dioxide Nutrition 0.000 description 1
- 125000001309 chloro group Chemical group Cl* 0.000 description 1
- 230000001684 chronic effect Effects 0.000 description 1
- 235000013985 cinnamic acid Nutrition 0.000 description 1
- 229930016911 cinnamic acid Natural products 0.000 description 1
- 125000000259 cinnolinyl group Chemical group N1=NC(=CC2=CC=CC=C12)* 0.000 description 1
- 229960004316 cisplatin Drugs 0.000 description 1
- DQLATGHUWYMOKM-UHFFFAOYSA-L cisplatin Chemical compound N[Pt](N)(Cl)Cl DQLATGHUWYMOKM-UHFFFAOYSA-L 0.000 description 1
- 229960002436 cladribine Drugs 0.000 description 1
- 238000011260 co-administration Methods 0.000 description 1
- 238000005345 coagulation Methods 0.000 description 1
- 230000015271 coagulation Effects 0.000 description 1
- 239000008119 colloidal silica Substances 0.000 description 1
- 230000000112 colonic effect Effects 0.000 description 1
- 230000000295 complement effect Effects 0.000 description 1
- 230000009918 complex formation Effects 0.000 description 1
- 238000011441 consolidation chemotherapy Methods 0.000 description 1
- 229960001681 croscarmellose sodium Drugs 0.000 description 1
- 238000006880 cross-coupling reaction Methods 0.000 description 1
- 125000004966 cyanoalkyl group Chemical group 0.000 description 1
- 150000004292 cyclic ethers Chemical class 0.000 description 1
- 125000000392 cycloalkenyl group Chemical group 0.000 description 1
- 125000004850 cyclobutylmethyl group Chemical group C1(CCC1)C* 0.000 description 1
- 125000001162 cycloheptenyl group Chemical group C1(=CCCCCC1)* 0.000 description 1
- 125000000596 cyclohexenyl group Chemical group C1(=CCCCC1)* 0.000 description 1
- 125000004210 cyclohexylmethyl group Chemical group [H]C([H])(*)C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])C1([H])[H] 0.000 description 1
- 125000000522 cyclooctenyl group Chemical group C1(=CCCCCCC1)* 0.000 description 1
- 125000000640 cyclooctyl group Chemical group [H]C1([H])C([H])([H])C([H])([H])C([H])([H])C([H])(*)C([H])([H])C([H])([H])C1([H])[H] 0.000 description 1
- 125000002433 cyclopentenyl group Chemical group C1(=CCCC1)* 0.000 description 1
- 125000004851 cyclopentylmethyl group Chemical group C1(CCCC1)C* 0.000 description 1
- 125000004186 cyclopropylmethyl group Chemical group [H]C([H])(*)C1([H])C([H])([H])C1([H])[H] 0.000 description 1
- 125000000151 cysteine group Chemical group N[C@@H](CS)C(=O)* 0.000 description 1
- 229960000975 daunorubicin Drugs 0.000 description 1
- STQGQHZAVUOBTE-VGBVRHCVSA-N daunorubicin Chemical compound O([C@H]1C[C@@](O)(CC=2C(O)=C3C(=O)C=4C=CC=C(C=4C(=O)C3=C(O)C=21)OC)C(C)=O)[C@H]1C[C@H](N)[C@H](O)[C@H](C)O1 STQGQHZAVUOBTE-VGBVRHCVSA-N 0.000 description 1
- 125000004855 decalinyl group Chemical group C1(CCCC2CCCCC12)* 0.000 description 1
- 229960003603 decitabine Drugs 0.000 description 1
- 230000002950 deficient Effects 0.000 description 1
- CYQFCXCEBYINGO-IAGOWNOFSA-N delta1-THC Chemical compound C1=C(C)CC[C@H]2C(C)(C)OC3=CC(CCCCC)=CC(O)=C3[C@@H]21 CYQFCXCEBYINGO-IAGOWNOFSA-N 0.000 description 1
- 238000004807 desolvation Methods 0.000 description 1
- 238000001514 detection method Methods 0.000 description 1
- 229910052805 deuterium Inorganic materials 0.000 description 1
- 238000011161 development Methods 0.000 description 1
- 230000018109 developmental process Effects 0.000 description 1
- 229960000633 dextran sulfate Drugs 0.000 description 1
- 238000007435 diagnostic evaluation Methods 0.000 description 1
- 238000002405 diagnostic procedure Methods 0.000 description 1
- 125000005509 dibenzothiophenyl group Chemical group 0.000 description 1
- ZBCBWPMODOFKDW-UHFFFAOYSA-N diethanolamine Chemical compound OCCNCCO ZBCBWPMODOFKDW-UHFFFAOYSA-N 0.000 description 1
- 229940043237 diethanolamine Drugs 0.000 description 1
- XXJWXESWEXIICW-UHFFFAOYSA-N diethylene glycol monoethyl ether Chemical compound CCOCCOCCO XXJWXESWEXIICW-UHFFFAOYSA-N 0.000 description 1
- 238000000113 differential scanning calorimetry Methods 0.000 description 1
- 125000004786 difluoromethoxy group Chemical group [H]C(F)(F)O* 0.000 description 1
- 125000001028 difluoromethyl group Chemical group [H]C(F)(F)* 0.000 description 1
- 125000000118 dimethyl group Chemical group [H]C([H])([H])* 0.000 description 1
- 125000006222 dimethylaminomethyl group Chemical group [H]C([H])([H])N(C([H])([H])[H])C([H])([H])* 0.000 description 1
- 230000003292 diminished effect Effects 0.000 description 1
- 229960003724 dimyristoylphosphatidylcholine Drugs 0.000 description 1
- AMTWCFIAVKBGOD-UHFFFAOYSA-N dioxosilane;methoxy-dimethyl-trimethylsilyloxysilane Chemical compound O=[Si]=O.CO[Si](C)(C)O[Si](C)(C)C AMTWCFIAVKBGOD-UHFFFAOYSA-N 0.000 description 1
- 125000005982 diphenylmethyl group Chemical group [H]C1=C([H])C([H])=C(C([H])=C1[H])C([H])(*)C1=C([H])C([H])=C([H])C([H])=C1[H] 0.000 description 1
- LOKCTEFSRHRXRJ-UHFFFAOYSA-I dipotassium trisodium dihydrogen phosphate hydrogen phosphate dichloride Chemical compound P(=O)(O)(O)[O-].[K+].P(=O)(O)([O-])[O-].[Na+].[Na+].[Cl-].[K+].[Cl-].[Na+] LOKCTEFSRHRXRJ-UHFFFAOYSA-I 0.000 description 1
- 150000002016 disaccharides Chemical class 0.000 description 1
- 230000005750 disease progression Effects 0.000 description 1
- 238000004821 distillation Methods 0.000 description 1
- MOTZDAYCYVMXPC-UHFFFAOYSA-N dodecyl hydrogen sulfate Chemical group CCCCCCCCCCCCOS(O)(=O)=O MOTZDAYCYVMXPC-UHFFFAOYSA-N 0.000 description 1
- 231100000673 dose–response relationship Toxicity 0.000 description 1
- 230000007783 downstream signaling Effects 0.000 description 1
- 229960004679 doxorubicin Drugs 0.000 description 1
- 229960004242 dronabinol Drugs 0.000 description 1
- 229940000406 drug candidate Drugs 0.000 description 1
- 239000003118 drug derivative Substances 0.000 description 1
- 230000036267 drug metabolism Effects 0.000 description 1
- 238000007580 dry-mixing Methods 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 230000002500 effect on skin Effects 0.000 description 1
- 238000004520 electroporation Methods 0.000 description 1
- 238000004924 electrostatic deposition Methods 0.000 description 1
- 230000001804 emulsifying effect Effects 0.000 description 1
- 229940046085 endocrine therapy drug gonadotropin releasing hormone analogues Drugs 0.000 description 1
- 238000002389 environmental scanning electron microscopy Methods 0.000 description 1
- 230000002255 enzymatic effect Effects 0.000 description 1
- 238000001952 enzyme assay Methods 0.000 description 1
- 239000000328 estrogen antagonist Substances 0.000 description 1
- AFAXGSQYZLGZPG-UHFFFAOYSA-N ethanedisulfonic acid Chemical compound OS(=O)(=O)CCS(O)(=O)=O AFAXGSQYZLGZPG-UHFFFAOYSA-N 0.000 description 1
- CCIVGXIOQKPBKL-UHFFFAOYSA-M ethanesulfonate Chemical compound CCS([O-])(=O)=O CCIVGXIOQKPBKL-UHFFFAOYSA-M 0.000 description 1
- 229940031098 ethanolamine Drugs 0.000 description 1
- 125000005678 ethenylene group Chemical group [H]C([*:1])=C([H])[*:2] 0.000 description 1
- 229940093499 ethyl acetate Drugs 0.000 description 1
- 125000001495 ethyl group Chemical group [H]C([H])([H])C([H])([H])* 0.000 description 1
- LVGKNOAMLMIIKO-QXMHVHEDSA-N ethyl oleate Chemical compound CCCCCCCC\C=C/CCCCCCCC(=O)OCC LVGKNOAMLMIIKO-QXMHVHEDSA-N 0.000 description 1
- 229940093471 ethyl oleate Drugs 0.000 description 1
- 125000002534 ethynyl group Chemical group [H]C#C* 0.000 description 1
- 238000001704 evaporation Methods 0.000 description 1
- 230000008020 evaporation Effects 0.000 description 1
- 229960005167 everolimus Drugs 0.000 description 1
- 230000001747 exhibiting effect Effects 0.000 description 1
- 238000002474 experimental method Methods 0.000 description 1
- 239000003925 fat Substances 0.000 description 1
- 235000019197 fats Nutrition 0.000 description 1
- 239000010685 fatty oil Substances 0.000 description 1
- 229960004177 filgrastim Drugs 0.000 description 1
- 238000011049 filling Methods 0.000 description 1
- 238000009093 first-line therapy Methods 0.000 description 1
- 229960000390 fludarabine Drugs 0.000 description 1
- GIUYCYHIANZCFB-FJFJXFQQSA-N fludarabine phosphate Chemical compound C1=NC=2C(N)=NC(F)=NC=2N1[C@@H]1O[C@H](COP(O)(O)=O)[C@@H](O)[C@@H]1O GIUYCYHIANZCFB-FJFJXFQQSA-N 0.000 description 1
- 125000003983 fluorenyl group Chemical group C1(=CC=CC=2C3=CC=CC=C3CC12)* 0.000 description 1
- 239000011737 fluorine Substances 0.000 description 1
- 125000003709 fluoroalkyl group Chemical group 0.000 description 1
- 229960002949 fluorouracil Drugs 0.000 description 1
- 102000004632 fms-Like Tyrosine Kinase 3 Human genes 0.000 description 1
- 238000005187 foaming Methods 0.000 description 1
- 235000013305 food Nutrition 0.000 description 1
- 238000001640 fractional crystallisation Methods 0.000 description 1
- 239000012634 fragment Substances 0.000 description 1
- 238000004108 freeze drying Methods 0.000 description 1
- 239000001530 fumaric acid Substances 0.000 description 1
- 230000006870 function Effects 0.000 description 1
- 238000002825 functional assay Methods 0.000 description 1
- 125000000524 functional group Chemical group 0.000 description 1
- 125000003844 furanonyl group Chemical group 0.000 description 1
- 125000002541 furyl group Chemical group 0.000 description 1
- 229960000578 gemtuzumab Drugs 0.000 description 1
- 238000007429 general method Methods 0.000 description 1
- 230000004077 genetic alteration Effects 0.000 description 1
- 231100000118 genetic alteration Toxicity 0.000 description 1
- 230000009477 glass transition Effects 0.000 description 1
- 239000000174 gluconic acid Chemical group 0.000 description 1
- 235000012208 gluconic acid Nutrition 0.000 description 1
- 239000004220 glutamic acid Chemical group 0.000 description 1
- 235000013922 glutamic acid Nutrition 0.000 description 1
- YQEMORVAKMFKLG-UHFFFAOYSA-N glycerine monostearate Natural products CCCCCCCCCCCCCCCCCC(=O)OC(CO)CO YQEMORVAKMFKLG-UHFFFAOYSA-N 0.000 description 1
- SVUQHVRAGMNPLW-UHFFFAOYSA-N glycerol monostearate Natural products CCCCCCCCCCCCCCCCC(=O)OCC(O)CO SVUQHVRAGMNPLW-UHFFFAOYSA-N 0.000 description 1
- FETSQPAGYOVAQU-UHFFFAOYSA-N glyceryl palmitostearate Chemical compound OCC(O)CO.CCCCCCCCCCCCCCCC(O)=O.CCCCCCCCCCCCCCCCCC(O)=O FETSQPAGYOVAQU-UHFFFAOYSA-N 0.000 description 1
- 229940046813 glyceryl palmitostearate Drugs 0.000 description 1
- MFWNKCLOYSRHCJ-BTTYYORXSA-N granisetron Chemical compound C1=CC=C2C(C(=O)N[C@H]3C[C@H]4CCC[C@@H](C3)N4C)=NN(C)C2=C1 MFWNKCLOYSRHCJ-BTTYYORXSA-N 0.000 description 1
- 229960003727 granisetron Drugs 0.000 description 1
- 238000000227 grinding Methods 0.000 description 1
- 230000012010 growth Effects 0.000 description 1
- 125000000262 haloalkenyl group Chemical group 0.000 description 1
- 125000000232 haloalkynyl group Chemical group 0.000 description 1
- 239000007902 hard capsule Substances 0.000 description 1
- 239000007887 hard shell capsule Substances 0.000 description 1
- 230000003862 health status Effects 0.000 description 1
- 238000010438 heat treatment Methods 0.000 description 1
- 201000005787 hematologic cancer Diseases 0.000 description 1
- 208000024200 hematopoietic and lymphoid system neoplasm Diseases 0.000 description 1
- 229920000669 heparin Polymers 0.000 description 1
- 229960002897 heparin Drugs 0.000 description 1
- 239000002554 heparinoid Substances 0.000 description 1
- 229940025770 heparinoids Drugs 0.000 description 1
- 210000003494 hepatocyte Anatomy 0.000 description 1
- 125000004446 heteroarylalkyl group Chemical group 0.000 description 1
- 125000006588 heterocycloalkylene group Chemical group 0.000 description 1
- 125000005980 hexynyl group Chemical group 0.000 description 1
- 229940088597 hormone Drugs 0.000 description 1
- 239000005556 hormone Substances 0.000 description 1
- 239000012943 hotmelt Substances 0.000 description 1
- WJRBRSLFGCUECM-UHFFFAOYSA-N hydantoin Chemical compound O=C1CNC(=O)N1 WJRBRSLFGCUECM-UHFFFAOYSA-N 0.000 description 1
- 229940091173 hydantoin Drugs 0.000 description 1
- 239000000017 hydrogel Substances 0.000 description 1
- 239000008173 hydrogenated soybean oil Substances 0.000 description 1
- 239000008172 hydrogenated vegetable oil Substances 0.000 description 1
- 238000006460 hydrolysis reaction Methods 0.000 description 1
- 230000003301 hydrolyzing effect Effects 0.000 description 1
- 125000002887 hydroxy group Chemical group [H]O* 0.000 description 1
- 229920003063 hydroxymethyl cellulose Polymers 0.000 description 1
- 229940031574 hydroxymethyl cellulose Drugs 0.000 description 1
- 125000004029 hydroxymethyl group Chemical group [H]OC([H])([H])* 0.000 description 1
- 229960003943 hypromellose Drugs 0.000 description 1
- 229960000908 idarubicin Drugs 0.000 description 1
- KTUFNOKKBVMGRW-UHFFFAOYSA-N imatinib Chemical compound C1CN(C)CCN1CC1=CC=C(C(=O)NC=2C=C(NC=3N=C(C=CN=3)C=3C=NC=CC=3)C(C)=CC=2)C=C1 KTUFNOKKBVMGRW-UHFFFAOYSA-N 0.000 description 1
- 229960002411 imatinib Drugs 0.000 description 1
- MTNDZQHUAFNZQY-UHFFFAOYSA-N imidazoline Chemical compound C1CN=CN1 MTNDZQHUAFNZQY-UHFFFAOYSA-N 0.000 description 1
- 125000002883 imidazolyl group Chemical group 0.000 description 1
- 125000001841 imino group Chemical group [H]N=* 0.000 description 1
- 230000006872 improvement Effects 0.000 description 1
- 238000000099 in vitro assay Methods 0.000 description 1
- 238000011065 in-situ storage Methods 0.000 description 1
- 238000010348 incorporation Methods 0.000 description 1
- 238000011534 incubation Methods 0.000 description 1
- 125000003387 indolinyl group Chemical group N1(CCC2=CC=CC=C12)* 0.000 description 1
- 125000003406 indolizinyl group Chemical group C=1(C=CN2C=CC=CC12)* 0.000 description 1
- 125000001041 indolyl group Chemical group 0.000 description 1
- 230000006698 induction Effects 0.000 description 1
- 238000009616 inductively coupled plasma Methods 0.000 description 1
- 239000003701 inert diluent Substances 0.000 description 1
- 230000004054 inflammatory process Effects 0.000 description 1
- 230000002401 inhibitory effect Effects 0.000 description 1
- 238000002347 injection Methods 0.000 description 1
- 239000007924 injection Substances 0.000 description 1
- 150000007529 inorganic bases Chemical class 0.000 description 1
- 229960000367 inositol Drugs 0.000 description 1
- CDAISMWEOUEBRE-GPIVLXJGSA-N inositol Chemical compound O[C@H]1[C@H](O)[C@@H](O)[C@H](O)[C@H](O)[C@@H]1O CDAISMWEOUEBRE-GPIVLXJGSA-N 0.000 description 1
- 229940047124 interferons Drugs 0.000 description 1
- 210000000936 intestine Anatomy 0.000 description 1
- 208000026876 intravascular large B-cell lymphoma Diseases 0.000 description 1
- 238000010253 intravenous injection Methods 0.000 description 1
- 125000002346 iodo group Chemical group I* 0.000 description 1
- 150000002500 ions Chemical class 0.000 description 1
- 125000001261 isocyanato group Chemical group *N=C=O 0.000 description 1
- 125000004594 isoindolinyl group Chemical group C1(NCC2=CC=CC=C12)* 0.000 description 1
- 125000000904 isoindolyl group Chemical group C=1(NC=C2C=CC=CC12)* 0.000 description 1
- 125000002183 isoquinolinyl group Chemical group C1(=NC=CC2=CC=CC=C12)* 0.000 description 1
- 125000005956 isoquinolyl group Chemical group 0.000 description 1
- 125000001810 isothiocyanato group Chemical group *N=C=S 0.000 description 1
- 125000000842 isoxazolyl group Chemical group 0.000 description 1
- NLYAJNPCOHFWQQ-UHFFFAOYSA-N kaolin Chemical compound O.O.O=[Al]O[Si](=O)O[Si](=O)O[Al]=O NLYAJNPCOHFWQQ-UHFFFAOYSA-N 0.000 description 1
- 239000004922 lacquer Substances 0.000 description 1
- 150000003951 lactams Chemical group 0.000 description 1
- 239000004310 lactic acid Substances 0.000 description 1
- 150000002596 lactones Chemical class 0.000 description 1
- 229950001845 lestaurtinib Drugs 0.000 description 1
- 239000003446 ligand Substances 0.000 description 1
- 150000002632 lipids Chemical class 0.000 description 1
- 238000001638 lipofection Methods 0.000 description 1
- 239000008297 liquid dosage form Substances 0.000 description 1
- 229940057995 liquid paraffin Drugs 0.000 description 1
- 229910052744 lithium Inorganic materials 0.000 description 1
- 230000033001 locomotion Effects 0.000 description 1
- 229940031703 low substituted hydroxypropyl cellulose Drugs 0.000 description 1
- 210000003750 lower gastrointestinal tract Anatomy 0.000 description 1
- 206010025135 lupus erythematosus Diseases 0.000 description 1
- 210000004324 lymphatic system Anatomy 0.000 description 1
- 208000006116 lymphomatoid granulomatosis Diseases 0.000 description 1
- 201000007919 lymphoplasmacytic lymphoma Diseases 0.000 description 1
- VZCYOOQTPOCHFL-UPHRSURJSA-N maleic acid Chemical compound OC(=O)\C=C/C(O)=O VZCYOOQTPOCHFL-UPHRSURJSA-N 0.000 description 1
- 239000011976 maleic acid Substances 0.000 description 1
- 239000001630 malic acid Substances 0.000 description 1
- 235000011090 malic acid Nutrition 0.000 description 1
- 229960002510 mandelic acid Drugs 0.000 description 1
- 229960004961 mechlorethamine Drugs 0.000 description 1
- HAWPXGHAZFHHAD-UHFFFAOYSA-N mechlorethamine Chemical compound ClCCN(C)CCCl HAWPXGHAZFHHAD-UHFFFAOYSA-N 0.000 description 1
- 229960001924 melphalan Drugs 0.000 description 1
- SGDBTWWWUNNDEQ-LBPRGKRZSA-N melphalan Chemical compound OC(=O)[C@@H](N)CC1=CC=C(N(CCCl)CCCl)C=C1 SGDBTWWWUNNDEQ-LBPRGKRZSA-N 0.000 description 1
- 238000007909 melt granulation Methods 0.000 description 1
- QSHDDOUJBYECFT-UHFFFAOYSA-N mercury Chemical compound [Hg] QSHDDOUJBYECFT-UHFFFAOYSA-N 0.000 description 1
- 229910052753 mercury Inorganic materials 0.000 description 1
- 230000037353 metabolic pathway Effects 0.000 description 1
- 238000006241 metabolic reaction Methods 0.000 description 1
- 229910052751 metal Inorganic materials 0.000 description 1
- 239000002184 metal Substances 0.000 description 1
- 229910021645 metal ion Inorganic materials 0.000 description 1
- 229920003145 methacrylic acid copolymer Polymers 0.000 description 1
- 229940098779 methanesulfonic acid Drugs 0.000 description 1
- 229930182817 methionine Natural products 0.000 description 1
- 229960000485 methotrexate Drugs 0.000 description 1
- 235000010270 methyl p-hydroxybenzoate Nutrition 0.000 description 1
- 239000004292 methyl p-hydroxybenzoate Substances 0.000 description 1
- WBYWAXJHAXSJNI-UHFFFAOYSA-N methyl p-hydroxycinnamate Natural products OC(=O)C=CC1=CC=CC=C1 WBYWAXJHAXSJNI-UHFFFAOYSA-N 0.000 description 1
- 125000000250 methylamino group Chemical group [H]N(*)C([H])([H])[H] 0.000 description 1
- 229960002216 methylparaben Drugs 0.000 description 1
- 238000003801 milling Methods 0.000 description 1
- 239000002480 mineral oil Substances 0.000 description 1
- 235000010446 mineral oil Nutrition 0.000 description 1
- 150000007522 mineralic acids Chemical class 0.000 description 1
- 230000004048 modification Effects 0.000 description 1
- 238000012986 modification Methods 0.000 description 1
- 235000019426 modified starch Nutrition 0.000 description 1
- 239000003607 modifier Substances 0.000 description 1
- 238000001565 modulated differential scanning calorimetry Methods 0.000 description 1
- CQDGTJPVBWZJAZ-UHFFFAOYSA-N monoethyl carbonate Chemical compound CCOC(O)=O CQDGTJPVBWZJAZ-UHFFFAOYSA-N 0.000 description 1
- 150000002772 monosaccharides Chemical class 0.000 description 1
- PJUIMOJAAPLTRJ-UHFFFAOYSA-N monothioglycerol Chemical compound OCC(O)CS PJUIMOJAAPLTRJ-UHFFFAOYSA-N 0.000 description 1
- 125000002757 morpholinyl group Chemical group 0.000 description 1
- 229940124303 multikinase inhibitor Drugs 0.000 description 1
- 201000000050 myeloid neoplasm Diseases 0.000 description 1
- SYSQUGFVNFXIIT-UHFFFAOYSA-N n-[4-(1,3-benzoxazol-2-yl)phenyl]-4-nitrobenzenesulfonamide Chemical class C1=CC([N+](=O)[O-])=CC=C1S(=O)(=O)NC1=CC=C(C=2OC3=CC=CC=C3N=2)C=C1 SYSQUGFVNFXIIT-UHFFFAOYSA-N 0.000 description 1
- 125000000740 n-pentyl group Chemical group [H]C([H])([H])C([H])([H])C([H])([H])C([H])([H])C([H])([H])* 0.000 description 1
- XGXNTJHZPBRBHJ-UHFFFAOYSA-N n-phenylpyrimidin-2-amine Chemical class N=1C=CC=NC=1NC1=CC=CC=C1 XGXNTJHZPBRBHJ-UHFFFAOYSA-N 0.000 description 1
- 239000002105 nanoparticle Substances 0.000 description 1
- KVBGVZZKJNLNJU-UHFFFAOYSA-N naphthalene-2-sulfonic acid Chemical compound C1=CC=CC2=CC(S(=O)(=O)O)=CC=C21 KVBGVZZKJNLNJU-UHFFFAOYSA-N 0.000 description 1
- 125000001624 naphthyl group Chemical group 0.000 description 1
- 125000004593 naphthyridinyl group Chemical group N1=C(C=CC2=CC=CN=C12)* 0.000 description 1
- 230000007935 neutral effect Effects 0.000 description 1
- 229910017604 nitric acid Inorganic materials 0.000 description 1
- 125000006574 non-aromatic ring group Chemical group 0.000 description 1
- 231100000252 nontoxic Toxicity 0.000 description 1
- 230000003000 nontoxic effect Effects 0.000 description 1
- 125000003518 norbornenyl group Chemical group C12(C=CC(CC1)C2)* 0.000 description 1
- 125000002868 norbornyl group Chemical group C12(CCC(CC1)C2)* 0.000 description 1
- 239000012038 nucleophile Substances 0.000 description 1
- 230000000269 nucleophilic effect Effects 0.000 description 1
- YYZUSRORWSJGET-UHFFFAOYSA-N octanoic acid ethyl ester Natural products CCCCCCCC(=O)OCC YYZUSRORWSJGET-UHFFFAOYSA-N 0.000 description 1
- 229920004905 octoxynol-10 Polymers 0.000 description 1
- 229920004914 octoxynol-40 Polymers 0.000 description 1
- 238000002515 oligonucleotide synthesis Methods 0.000 description 1
- 229920001542 oligosaccharide Polymers 0.000 description 1
- 150000002482 oligosaccharides Chemical class 0.000 description 1
- 229960005343 ondansetron Drugs 0.000 description 1
- 239000008203 oral pharmaceutical composition Substances 0.000 description 1
- 150000007524 organic acids Chemical class 0.000 description 1
- 238000006053 organic reaction Methods 0.000 description 1
- 239000003791 organic solvent mixture Substances 0.000 description 1
- 125000001715 oxadiazolyl group Chemical group 0.000 description 1
- 125000002971 oxazolyl group Chemical group 0.000 description 1
- 238000007254 oxidation reaction Methods 0.000 description 1
- 125000000466 oxiranyl group Chemical group 0.000 description 1
- 229960001592 paclitaxel Drugs 0.000 description 1
- AHJRHEGDXFFMBM-UHFFFAOYSA-N palbociclib Chemical compound N1=C2N(C3CCCC3)C(=O)C(C(=O)C)=C(C)C2=CN=C1NC(N=C1)=CC=C1N1CCNCC1 AHJRHEGDXFFMBM-UHFFFAOYSA-N 0.000 description 1
- 229960004390 palbociclib Drugs 0.000 description 1
- 229960002131 palonosetron Drugs 0.000 description 1
- CPZBLNMUGSZIPR-NVXWUHKLSA-N palonosetron Chemical compound C1N(CC2)CCC2[C@@H]1N1C(=O)C(C=CC=C2CCC3)=C2[C@H]3C1 CPZBLNMUGSZIPR-NVXWUHKLSA-N 0.000 description 1
- 230000036961 partial effect Effects 0.000 description 1
- 230000007170 pathology Effects 0.000 description 1
- 239000003961 penetration enhancing agent Substances 0.000 description 1
- 125000003538 pentan-3-yl group Chemical group [H]C([H])([H])C([H])([H])C([H])(*)C([H])([H])C([H])([H])[H] 0.000 description 1
- 229940043138 pentosan polysulfate Drugs 0.000 description 1
- 125000005981 pentynyl group Chemical group 0.000 description 1
- 230000002085 persistent effect Effects 0.000 description 1
- 238000009522 phase III clinical trial Methods 0.000 description 1
- 125000001791 phenazinyl group Chemical group C1(=CC=CC2=NC3=CC=CC=C3N=C12)* 0.000 description 1
- 125000001484 phenothiazinyl group Chemical group C1(=CC=CC=2SC3=CC=CC=C3NC12)* 0.000 description 1
- 125000001644 phenoxazinyl group Chemical group C1(=CC=CC=2OC3=CC=CC=C3NC12)* 0.000 description 1
- NBIIXXVUZAFLBC-UHFFFAOYSA-K phosphate Chemical compound [O-]P([O-])([O-])=O NBIIXXVUZAFLBC-UHFFFAOYSA-K 0.000 description 1
- 239000010452 phosphate Substances 0.000 description 1
- 239000002953 phosphate buffered saline Substances 0.000 description 1
- WTJKGGKOPKCXLL-RRHRGVEJSA-N phosphatidylcholine Chemical compound CCCCCCCCCCCCCCCC(=O)OC[C@H](COP([O-])(=O)OCC[N+](C)(C)C)OC(=O)CCCCCCCC=CCCCCCCCC WTJKGGKOPKCXLL-RRHRGVEJSA-N 0.000 description 1
- FAIAAWCVCHQXDN-UHFFFAOYSA-N phosphorus trichloride Chemical compound ClP(Cl)Cl FAIAAWCVCHQXDN-UHFFFAOYSA-N 0.000 description 1
- XNGIFLGASWRNHJ-UHFFFAOYSA-L phthalate(2-) Chemical compound [O-]C(=O)C1=CC=CC=C1C([O-])=O XNGIFLGASWRNHJ-UHFFFAOYSA-L 0.000 description 1
- 125000004592 phthalazinyl group Chemical group C1(=NN=CC2=CC=CC=C12)* 0.000 description 1
- 239000000049 pigment Substances 0.000 description 1
- JTHRRMFZHSDGNJ-UHFFFAOYSA-N piperazine-2,3-dione Chemical compound O=C1NCCNC1=O JTHRRMFZHSDGNJ-UHFFFAOYSA-N 0.000 description 1
- 125000004193 piperazinyl group Chemical group 0.000 description 1
- IUGYQRQAERSCNH-UHFFFAOYSA-N pivalic acid Chemical compound CC(C)(C)C(O)=O IUGYQRQAERSCNH-UHFFFAOYSA-N 0.000 description 1
- 229910052697 platinum Inorganic materials 0.000 description 1
- 238000001907 polarising light microscopy Methods 0.000 description 1
- 229920001308 poly(aminoacid) Polymers 0.000 description 1
- 229920000747 poly(lactic acid) Polymers 0.000 description 1
- 229920001610 polycaprolactone Polymers 0.000 description 1
- 239000004632 polycaprolactone Substances 0.000 description 1
- 125000003367 polycyclic group Chemical group 0.000 description 1
- 229940068918 polyethylene glycol 400 Drugs 0.000 description 1
- 239000004633 polyglycolic acid Substances 0.000 description 1
- 239000004626 polylactic acid Substances 0.000 description 1
- 229920005862 polyol Polymers 0.000 description 1
- 150000003077 polyols Chemical class 0.000 description 1
- 150000004804 polysaccharides Chemical class 0.000 description 1
- 229940068977 polysorbate 20 Drugs 0.000 description 1
- PHXJVRSECIGDHY-UHFFFAOYSA-N ponatinib Chemical compound C1CN(C)CCN1CC(C(=C1)C(F)(F)F)=CC=C1NC(=O)C1=CC=C(C)C(C#CC=2N3N=CC=CC3=NC=2)=C1 PHXJVRSECIGDHY-UHFFFAOYSA-N 0.000 description 1
- 229960001131 ponatinib Drugs 0.000 description 1
- 238000010837 poor prognosis Methods 0.000 description 1
- 210000003240 portal vein Anatomy 0.000 description 1
- 239000001103 potassium chloride Substances 0.000 description 1
- 235000011164 potassium chloride Nutrition 0.000 description 1
- 235000010241 potassium sorbate Nutrition 0.000 description 1
- 239000004302 potassium sorbate Substances 0.000 description 1
- 229940069338 potassium sorbate Drugs 0.000 description 1
- WSHYKIAQCMIPTB-UHFFFAOYSA-M potassium;2-oxo-3-(3-oxo-1-phenylbutyl)chromen-4-olate Chemical compound [K+].[O-]C=1C2=CC=CC=C2OC(=O)C=1C(CC(=O)C)C1=CC=CC=C1 WSHYKIAQCMIPTB-UHFFFAOYSA-M 0.000 description 1
- 230000003389 potentiating effect Effects 0.000 description 1
- 238000001556 precipitation Methods 0.000 description 1
- 230000035755 proliferation Effects 0.000 description 1
- 230000002035 prolonged effect Effects 0.000 description 1
- 125000006410 propenylene group Chemical group 0.000 description 1
- 235000019260 propionic acid Nutrition 0.000 description 1
- 235000010232 propyl p-hydroxybenzoate Nutrition 0.000 description 1
- 239000004405 propyl p-hydroxybenzoate Substances 0.000 description 1
- 229960003415 propylparaben Drugs 0.000 description 1
- MWWATHDPGQKSAR-UHFFFAOYSA-N propyne Chemical compound CC#C MWWATHDPGQKSAR-UHFFFAOYSA-N 0.000 description 1
- 125000002568 propynyl group Chemical group [*]C#CC([H])([H])[H] 0.000 description 1
- 230000001681 protective effect Effects 0.000 description 1
- 125000001042 pteridinyl group Chemical group N1=C(N=CC2=NC=CN=C12)* 0.000 description 1
- 235000021251 pulses Nutrition 0.000 description 1
- 125000000561 purinyl group Chemical group N1=C(N=C2N=CNC2=C1)* 0.000 description 1
- 125000003373 pyrazinyl group Chemical group 0.000 description 1
- USPWKWBDZOARPV-UHFFFAOYSA-N pyrazolidine Chemical compound C1CNNC1 USPWKWBDZOARPV-UHFFFAOYSA-N 0.000 description 1
- DNXIASIHZYFFRO-UHFFFAOYSA-N pyrazoline Chemical compound C1CN=NC1 DNXIASIHZYFFRO-UHFFFAOYSA-N 0.000 description 1
- 125000003226 pyrazolyl group Chemical group 0.000 description 1
- 125000002098 pyridazinyl group Chemical group 0.000 description 1
- UMJSCPRVCHMLSP-UHFFFAOYSA-N pyridine Natural products COC1=CC=CN=C1 UMJSCPRVCHMLSP-UHFFFAOYSA-N 0.000 description 1
- 150000008518 pyridopyrimidines Chemical class 0.000 description 1
- 125000000714 pyrimidinyl group Chemical group 0.000 description 1
- HNJBEVLQSNELDL-UHFFFAOYSA-N pyrrolidin-2-one Chemical compound O=C1CCCN1 HNJBEVLQSNELDL-UHFFFAOYSA-N 0.000 description 1
- ZVJHJDDKYZXRJI-UHFFFAOYSA-N pyrroline Natural products C1CC=NC1 ZVJHJDDKYZXRJI-UHFFFAOYSA-N 0.000 description 1
- 229940107700 pyruvic acid Drugs 0.000 description 1
- 125000002294 quinazolinyl group Chemical group N1=C(N=CC2=CC=CC=C12)* 0.000 description 1
- IUVKMZGDUIUOCP-BTNSXGMBSA-N quinbolone Chemical compound O([C@H]1CC[C@H]2[C@H]3[C@@H]([C@]4(C=CC(=O)C=C4CC3)C)CC[C@@]21C)C1=CCCC1 IUVKMZGDUIUOCP-BTNSXGMBSA-N 0.000 description 1
- 125000002943 quinolinyl group Chemical group N1=C(C=CC2=CC=CC=C12)* 0.000 description 1
- 125000001567 quinoxalinyl group Chemical group N1=C(C=NC2=CC=CC=C12)* 0.000 description 1
- 230000002285 radioactive effect Effects 0.000 description 1
- 239000007898 rapid-disintegration tablet Substances 0.000 description 1
- 239000011541 reaction mixture Substances 0.000 description 1
- 102000027426 receptor tyrosine kinases Human genes 0.000 description 1
- 108091008598 receptor tyrosine kinases Proteins 0.000 description 1
- 238000011084 recovery Methods 0.000 description 1
- 230000009467 reduction Effects 0.000 description 1
- 238000011160 research Methods 0.000 description 1
- 230000008261 resistance mechanism Effects 0.000 description 1
- 229940100486 rice starch Drugs 0.000 description 1
- 102200003022 rs1057519698 Human genes 0.000 description 1
- 102220331758 rs1057519698 Human genes 0.000 description 1
- 102220197958 rs1057519781 Human genes 0.000 description 1
- 102220197960 rs1057519783 Human genes 0.000 description 1
- 102220197961 rs1057519784 Human genes 0.000 description 1
- 102220198074 rs1057519859 Human genes 0.000 description 1
- 102220333660 rs1555398524 Human genes 0.000 description 1
- 102220272179 rs1555615051 Human genes 0.000 description 1
- 102200003024 rs281864719 Human genes 0.000 description 1
- 102200003103 rs281864719 Human genes 0.000 description 1
- 102200003097 rs281864720 Human genes 0.000 description 1
- 102200003102 rs863225281 Human genes 0.000 description 1
- 229960004889 salicylic acid Drugs 0.000 description 1
- 238000005070 sampling Methods 0.000 description 1
- 238000004626 scanning electron microscopy Methods 0.000 description 1
- 238000012216 screening Methods 0.000 description 1
- CDAISMWEOUEBRE-UHFFFAOYSA-N scyllo-inosotol Natural products OC1C(O)C(O)C(O)C(O)C1O CDAISMWEOUEBRE-UHFFFAOYSA-N 0.000 description 1
- 239000000565 sealant Substances 0.000 description 1
- 230000028327 secretion Effects 0.000 description 1
- 229940113147 shellac Drugs 0.000 description 1
- 239000004208 shellac Substances 0.000 description 1
- ZLGIYFNHBLSMPS-ATJNOEHPSA-N shellac Chemical compound OCCCCCC(O)C(O)CCCCCCCC(O)=O.C1C23[C@H](C(O)=O)CCC2[C@](C)(CO)[C@@H]1C(C(O)=O)=C[C@@H]3O ZLGIYFNHBLSMPS-ATJNOEHPSA-N 0.000 description 1
- 235000013874 shellac Nutrition 0.000 description 1
- 238000004904 shortening Methods 0.000 description 1
- 230000011664 signaling Effects 0.000 description 1
- 229920000260 silastic Polymers 0.000 description 1
- 229920002545 silicone oil Polymers 0.000 description 1
- 229940083037 simethicone Drugs 0.000 description 1
- 239000002002 slurry Substances 0.000 description 1
- 229960003885 sodium benzoate Drugs 0.000 description 1
- 239000012279 sodium borohydride Substances 0.000 description 1
- 229910000033 sodium borohydride Inorganic materials 0.000 description 1
- 239000001509 sodium citrate Substances 0.000 description 1
- NLJMYIDDQXHKNR-UHFFFAOYSA-K sodium citrate Chemical compound O.O.[Na+].[Na+].[Na+].[O-]C(=O)CC(O)(CC([O-])=O)C([O-])=O NLJMYIDDQXHKNR-UHFFFAOYSA-K 0.000 description 1
- 235000011083 sodium citrates Nutrition 0.000 description 1
- HRZFUMHJMZEROT-UHFFFAOYSA-L sodium disulfite Chemical compound [Na+].[Na+].[O-]S(=O)S([O-])(=O)=O HRZFUMHJMZEROT-UHFFFAOYSA-L 0.000 description 1
- 235000010267 sodium hydrogen sulphite Nutrition 0.000 description 1
- 239000001540 sodium lactate Substances 0.000 description 1
- 235000011088 sodium lactate Nutrition 0.000 description 1
- 229940005581 sodium lactate Drugs 0.000 description 1
- 229940001584 sodium metabisulfite Drugs 0.000 description 1
- 235000010262 sodium metabisulphite Nutrition 0.000 description 1
- 239000001488 sodium phosphate Substances 0.000 description 1
- 229910000162 sodium phosphate Inorganic materials 0.000 description 1
- 235000011008 sodium phosphates Nutrition 0.000 description 1
- ODFAPIRLUPAQCQ-UHFFFAOYSA-M sodium stearoyl lactylate Chemical compound [Na+].CCCCCCCCCCCCCCCCCC(=O)OC(C)C(=O)OC(C)C([O-])=O ODFAPIRLUPAQCQ-UHFFFAOYSA-M 0.000 description 1
- JAJWGJBVLPIOOH-IZYKLYLVSA-M sodium taurocholate Chemical compound [Na+].C([C@H]1C[C@H]2O)[C@H](O)CC[C@]1(C)[C@@H]1[C@@H]2[C@@H]2CC[C@H]([C@@H](CCC(=O)NCCS([O-])(=O)=O)C)[C@@]2(C)[C@@H](O)C1 JAJWGJBVLPIOOH-IZYKLYLVSA-M 0.000 description 1
- 235000010339 sodium tetraborate Nutrition 0.000 description 1
- AKHNMLFCWUSKQB-UHFFFAOYSA-L sodium thiosulfate Chemical compound [Na+].[Na+].[O-]S([O-])(=O)=S AKHNMLFCWUSKQB-UHFFFAOYSA-L 0.000 description 1
- 235000019345 sodium thiosulphate Nutrition 0.000 description 1
- 239000007886 soft shell capsule Substances 0.000 description 1
- 239000012439 solid excipient Substances 0.000 description 1
- 238000000935 solvent evaporation Methods 0.000 description 1
- 238000000638 solvent extraction Methods 0.000 description 1
- 229960003787 sorafenib Drugs 0.000 description 1
- 238000001179 sorption measurement Methods 0.000 description 1
- 230000009870 specific binding Effects 0.000 description 1
- 230000003595 spectral effect Effects 0.000 description 1
- 238000012306 spectroscopic technique Methods 0.000 description 1
- 238000004611 spectroscopical analysis Methods 0.000 description 1
- 238000005563 spheronization Methods 0.000 description 1
- 238000009987 spinning Methods 0.000 description 1
- 206010062113 splenic marginal zone lymphoma Diseases 0.000 description 1
- 239000007858 starting material Substances 0.000 description 1
- 229960004274 stearic acid Drugs 0.000 description 1
- 210000000130 stem cell Anatomy 0.000 description 1
- 239000012058 sterile packaged powder Substances 0.000 description 1
- 150000003432 sterols Chemical class 0.000 description 1
- 235000003702 sterols Nutrition 0.000 description 1
- 125000000547 substituted alkyl group Chemical group 0.000 description 1
- 239000000758 substrate Substances 0.000 description 1
- KDYFGRWQOYBRFD-UHFFFAOYSA-L succinate(2-) Chemical compound [O-]C(=O)CCC([O-])=O KDYFGRWQOYBRFD-UHFFFAOYSA-L 0.000 description 1
- 229960002317 succinimide Drugs 0.000 description 1
- 238000009495 sugar coating Methods 0.000 description 1
- 125000000446 sulfanediyl group Chemical group *S* 0.000 description 1
- 125000006296 sulfonyl amino group Chemical group [H]N(*)S(*)(=O)=O 0.000 description 1
- 125000000472 sulfonyl group Chemical group *S(*)(=O)=O 0.000 description 1
- WINHZLLDWRZWRT-ATVHPVEESA-N sunitinib Chemical compound CCN(CC)CCNC(=O)C1=C(C)NC(\C=C/2C3=CC(F)=CC=C3NC\2=O)=C1C WINHZLLDWRZWRT-ATVHPVEESA-N 0.000 description 1
- 229960001796 sunitinib Drugs 0.000 description 1
- 230000000153 supplemental effect Effects 0.000 description 1
- 238000013268 sustained release Methods 0.000 description 1
- 239000012730 sustained-release form Substances 0.000 description 1
- 230000008961 swelling Effects 0.000 description 1
- UXXQOJXBIDBUAC-UHFFFAOYSA-N tandutinib Chemical compound COC1=CC2=C(N3CCN(CC3)C(=O)NC=3C=CC(OC(C)C)=CC=3)N=CN=C2C=C1OCCCN1CCCCC1 UXXQOJXBIDBUAC-UHFFFAOYSA-N 0.000 description 1
- 229950009893 tandutinib Drugs 0.000 description 1
- 230000008685 targeting Effects 0.000 description 1
- WBWWGRHZICKQGZ-GIHLXUJPSA-N taurocholic acid Chemical compound C([C@@H]1C[C@H]2O)[C@@H](O)CC[C@]1(C)[C@@H]1[C@@H]2[C@@H]2CC[C@@H]([C@@H](CCC(=O)NCCS(O)(=O)=O)C)[C@@]2(C)[C@H](O)C1 WBWWGRHZICKQGZ-GIHLXUJPSA-N 0.000 description 1
- RCINICONZNJXQF-MZXODVADSA-N taxol Chemical compound O([C@@H]1[C@@]2(C[C@@H](C(C)=C(C2(C)C)[C@H](C([C@]2(C)[C@@H](O)C[C@H]3OC[C@]3([C@H]21)OC(C)=O)=O)OC(=O)C)OC(=O)[C@H](O)[C@@H](NC(=O)C=1C=CC=CC=1)C=1C=CC=CC=1)O)C(=O)C1=CC=CC=C1 RCINICONZNJXQF-MZXODVADSA-N 0.000 description 1
- 229960004964 temozolomide Drugs 0.000 description 1
- 125000000147 tetrahydroquinolinyl group Chemical group N1(CCCC2=CC=CC=C12)* 0.000 description 1
- RAOIDOHSFRTOEL-UHFFFAOYSA-N tetrahydrothiophene Chemical compound C1CCSC1 RAOIDOHSFRTOEL-UHFFFAOYSA-N 0.000 description 1
- 125000003831 tetrazolyl group Chemical group 0.000 description 1
- 238000011287 therapeutic dose Methods 0.000 description 1
- 125000001113 thiadiazolyl group Chemical group 0.000 description 1
- CBDKQYKMCICBOF-UHFFFAOYSA-N thiazoline Chemical compound C1CN=CS1 CBDKQYKMCICBOF-UHFFFAOYSA-N 0.000 description 1
- 125000000335 thiazolyl group Chemical group 0.000 description 1
- 239000002562 thickening agent Substances 0.000 description 1
- RTKIYNMVFMVABJ-UHFFFAOYSA-L thimerosal Chemical compound [Na+].CC[Hg]SC1=CC=CC=C1C([O-])=O RTKIYNMVFMVABJ-UHFFFAOYSA-L 0.000 description 1
- 125000005309 thioalkoxy group Chemical group 0.000 description 1
- 125000002813 thiocarbonyl group Chemical group *C(*)=S 0.000 description 1
- 150000003573 thiols Chemical class 0.000 description 1
- 229960004906 thiomersal Drugs 0.000 description 1
- BRNULMACUQOKMR-UHFFFAOYSA-N thiomorpholine Chemical compound C1CSCCN1 BRNULMACUQOKMR-UHFFFAOYSA-N 0.000 description 1
- 229930192474 thiophene Natural products 0.000 description 1
- IBBLKSWSCDAPIF-UHFFFAOYSA-N thiopyran Chemical compound S1C=CC=C=C1 IBBLKSWSCDAPIF-UHFFFAOYSA-N 0.000 description 1
- DHCDFWKWKRSZHF-UHFFFAOYSA-L thiosulfate(2-) Chemical compound [O-]S([S-])(=O)=O DHCDFWKWKRSZHF-UHFFFAOYSA-L 0.000 description 1
- 125000000464 thioxo group Chemical group S=* 0.000 description 1
- 230000009424 thromboembolic effect Effects 0.000 description 1
- 229960003087 tioguanine Drugs 0.000 description 1
- MNRILEROXIRVNJ-UHFFFAOYSA-N tioguanine Chemical compound N1C(N)=NC(=S)C2=NC=N[C]21 MNRILEROXIRVNJ-UHFFFAOYSA-N 0.000 description 1
- 238000003354 tissue distribution assay Methods 0.000 description 1
- 239000004408 titanium dioxide Substances 0.000 description 1
- UCFGDBYHRUNTLO-QHCPKHFHSA-N topotecan Chemical compound C1=C(O)C(CN(C)C)=C2C=C(CN3C4=CC5=C(C3=O)COC(=O)[C@]5(O)CC)C4=NC2=C1 UCFGDBYHRUNTLO-QHCPKHFHSA-N 0.000 description 1
- 229960000303 topotecan Drugs 0.000 description 1
- 230000001988 toxicity Effects 0.000 description 1
- 231100000419 toxicity Toxicity 0.000 description 1
- 238000012546 transfer Methods 0.000 description 1
- 238000000844 transformation Methods 0.000 description 1
- 230000001052 transient effect Effects 0.000 description 1
- 230000007704 transition Effects 0.000 description 1
- 238000011269 treatment regimen Methods 0.000 description 1
- 229960001727 tretinoin Drugs 0.000 description 1
- 125000004306 triazinyl group Chemical group 0.000 description 1
- 125000001425 triazolyl group Chemical group 0.000 description 1
- WEAPVABOECTMGR-UHFFFAOYSA-N triethyl 2-acetyloxypropane-1,2,3-tricarboxylate Chemical compound CCOC(=O)CC(C(=O)OCC)(OC(C)=O)CC(=O)OCC WEAPVABOECTMGR-UHFFFAOYSA-N 0.000 description 1
- 125000005152 trihalomethanesulfonyl group Chemical group 0.000 description 1
- 125000005591 trimellitate group Chemical group 0.000 description 1
- BSVBQGMMJUBVOD-UHFFFAOYSA-N trisodium borate Chemical compound [Na+].[Na+].[Na+].[O-]B([O-])[O-] BSVBQGMMJUBVOD-UHFFFAOYSA-N 0.000 description 1
- RYFMWSXOAZQYPI-UHFFFAOYSA-K trisodium phosphate Chemical compound [Na+].[Na+].[Na+].[O-]P([O-])([O-])=O RYFMWSXOAZQYPI-UHFFFAOYSA-K 0.000 description 1
- 229960000281 trometamol Drugs 0.000 description 1
- 230000004614 tumor growth Effects 0.000 description 1
- 235000015112 vegetable and seed oil Nutrition 0.000 description 1
- 239000008158 vegetable oil Substances 0.000 description 1
- LQBVNQSMGBZMKD-UHFFFAOYSA-N venetoclax Chemical compound C=1C=C(Cl)C=CC=1C=1CC(C)(C)CCC=1CN(CC1)CCN1C(C=C1OC=2C=C3C=CNC3=NC=2)=CC=C1C(=O)NS(=O)(=O)C(C=C1[N+]([O-])=O)=CC=C1NCC1CCOCC1 LQBVNQSMGBZMKD-UHFFFAOYSA-N 0.000 description 1
- 229960001183 venetoclax Drugs 0.000 description 1
- 229920002554 vinyl polymer Polymers 0.000 description 1
- 238000011179 visual inspection Methods 0.000 description 1
- WAEXFXRVDQXREF-UHFFFAOYSA-N vorinostat Chemical compound ONC(=O)CCCCCCC(=O)NC1=CC=CC=C1 WAEXFXRVDQXREF-UHFFFAOYSA-N 0.000 description 1
- 229960000237 vorinostat Drugs 0.000 description 1
- 230000004580 weight loss Effects 0.000 description 1
- 229940100445 wheat starch Drugs 0.000 description 1
- XOOUIPVCVHRTMJ-UHFFFAOYSA-L zinc stearate Chemical compound [Zn+2].CCCCCCCCCCCCCCCCCC([O-])=O.CCCCCCCCCCCCCCCCCC([O-])=O XOOUIPVCVHRTMJ-UHFFFAOYSA-L 0.000 description 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D241/00—Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings
- C07D241/02—Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings
- C07D241/10—Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members
- C07D241/14—Heterocyclic compounds containing 1,4-diazine or hydrogenated 1,4-diazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
- C07D241/24—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals
- C07D241/26—Carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals with nitrogen atoms directly attached to ring carbon atoms
Definitions
- FIELD Described herein are compounds, methods of making such compounds, pharmaceutical compositions, and medicaments containing such compounds, and methods of using such compounds and compositions to inhibit the activity of FLT3.
- FMS-like tyrosine kinase 3 FLT3 ligand (FL)
- FLT3 dimerizes and induces many signaling pathways related to hematopoietic cell survival and proliferation.
- FLT3 is also often overexpressed in many acute leukemia cells, and mutation of the FLT3 gene is the most frequent generic alteration in acute myeloid leukemia. Genetic mutation of the FLT3 gene is identified in approximately one-third of newly diagnosed AML adult patients (Papaemmanuil et al., 2016, N Engl J Med.374: 2209) where these mutations cause constitutive FLT3 activation. Genetic alterations of FLT3 have also been identified in other myeloid malignancies, such as myelodysplastic syndromes (MDS) and acute lymphocytic leukemia (ALL). Certain FLT3 mutations are either internal tandem duplicates (ITD) or point mutations in the tyrosine kinase domain.
- ITD internal tandem duplicates
- FLT3-ITD mutations are present in approximately 20% of AML patients, and point mutations are present in approximately 5%-10% of AML patients. Both mutations can constitutively activate FLT3 through ligand-independent autophosphorylation causing increased signaling and cellular proliferation, leading to survival of the leukemia cells (Kennedy et al., 2020, Front. Oncol. 10:612880; Kiyoi et al., 2020, Cancer Science 111:312). FLT3-ITD mutation is especially associated with a poor prognosis and high rate of relapse, and ITD mutations can be gained or lost during disease progression and/or relapse.
- first-generation FLT3 inhibitors included multi- kinase inhibitors sorafenib, midostaurin, lestaurtinib, sunitinib, and tandutinib. These first-generation inhibitors lacked efficacy as a monotherapy, most likely due in part to their non-specific effects.
- Second-generation FLT3 inhibitors have greater specificity for FLT3 and are more potent.
- Second generation inhibitors include gilteritinib, crenolanib, and quizartinib.
- Gilteritinib and crenolanib are both Type I inhibitors, meaning that they can bind to both the inactive and active conformations of FLT3, while quizartinib is a Type II inhibitor that can only bind to the inactive conformation.
- An additional inhibitor of FLT3 includes the covalently-binding FLT3 inhibitor FF-10101, which has demonstrated activity against quizartinib-resistant AML (Yamaura et al., 2018, Blood, 131: 426) and is currently being studied in clinical trials for relapsed or refractory hematological malignancies, including AML.
- FF-10101 and other N-phenylpyrimidine-2-amine compounds are described in PCT Application WO 2013/157540 and U.S. Patent No.9,145,415 assigned to Fujifilm Corporation.
- PCT Application WO 2015/056683 and U.S. Patent No.9,701,644, also assigned to Fujifilm Corporation describe crystalline forms of FF-10101.
- Genosco and Oscotec, Inc. describe pyridopyrimidine compounds and their use in the treatment of hematological malignancies in PCT Application WO 2013/142382 and U.S. Patent No. 8,877,763. Crystal forms of the specific FLT3 inhibitor G-749 are described in WO 2020/040467 assigned to Oscotec, Inc. and oral pharmaceutical compositions of G-749 are described in WO 2020/159117 also assigned to Oscotec, Inc.
- the object of the present invention is to provide inhibitors of FLT3, pharmaceutical compositions thereof, and methods for the inhibition of FLT3. Also of key importance is to develop inhibitors that will overcome the known resistance mechanisms of co-mutations ITD with XYZ that re- awaken the autophosphorylation capabilities of FLT3.
- SUMMARY [0012]
- described herein are inhibitors of FLT3.
- the inhibitors of FLT3 are irreversible inhibitors.
- the inhibitors of FLT3 are reversible inhibitors.
- described herein are methods for synthesizing such irreversible inhibitors, methods for using such irreversible inhibitors in the treatment of diseases (including diseases wherein inhibition of FLT3 provides therapeutic benefit to a patient having the disease).
- pharmaceutical compositions that comprise an inhibitor of FLT3 and one or more pharmaceutically acceptable carriers, excipients, or diluents.
- the compounds and pharmaceutical compositions described herein are used for the treatment of hematological malignancies, including but not limited to, acute myeloid leukemia.
- R 1 is H
- the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl-3-[(1-oxo-2-propen-1- yl)amino]phenyl]amino]-2-pyrazinecarboxamide (CAS 1254050-92-4), or a stereoisomer or salt thereof.
- a compound according to Formula (IIa) or (IIb) having the structure: or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- provided herein is a compound according to Formula (IIIa) or (IIIb) having the structure: or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- compositions which comprise a therapeutically effective amount of at least one of any of the compounds herein, or a pharmaceutically acceptable salt, pharmaceutically active metabolite, pharmaceutically acceptable prodrug, or pharmaceutically acceptable solvate thereof.
- pharmaceutical compositions provided herein further include a pharmaceutically acceptable carrier, excipient and/or diluent.
- compositions formulated for administration by an appropriate route and means containing effective concentrations of one or more of the compounds provided herein, or pharmaceutically effective derivatives thereof, that deliver amounts effective for the treatment, prevention, or amelioration of one or more symptoms of diseases, disorders or conditions that are modulated or otherwise affected by FLT3 activity, in which FLT3 activity is implicated, or are characterized by a mutation in the FLT3 gene, are provided.
- the effective amounts and concentrations are effective for ameliorating any of the symptoms of any of the diseases, disorders or conditions disclosed herein.
- a pharmaceutical composition comprising: i) a pharmaceutically acceptable carrier, diluent, and/or excipient; and ii) one or more compounds provided herein.
- compositions comprising a therapeutically effective amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and a pharmaceutically acceptable carrier, excipient, or diluent.
- the pharmaceutical composition comprising the compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, and rectal administration.
- kits for preventing, treating or ameliorating in a mammal a disease or condition that is related to the aberrant activity of FLT3, which comprises administering to the mammal an effective disease-treating or condition-treating amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- kits for preventing, treating or ameliorating in a mammal a disease or condition that is related to a mutation of the FLT3 gene which comprises administering to the mammal an effective disease-treating or condition-treating amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- the FLT3 mutation is an internal tandem mutation (FLT3-ITD).
- the FLT3 mutation is a point mutation in the tyrosine kinase domain (FLT3-TKD).
- the disease or condition is a hematologic malignancy, including, but not limited to leukemia, lymphoma, or multiple myeloma.
- the disease or condition is a leukemia, including, but not limited to, acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), mast-cell leukemia (MCL) or myelodysplastic syndrome (MDS).
- ALL acute lymphocytic leukemia
- AML acute myeloid leukemia
- CLL chronic lymphocytic leukemia
- CML chronic myeloid leukemia
- PDL prolymphocytic leukemia
- LGL large granular lymphocytic
- HCL hairy cell leukemia
- MCL mast-cell leukemia
- MDS myelodysplastic syndrome
- the AML is FLT3 mutation-positive and newly diagnosed. In certain embodiments, the AML is relapsed or refractory. In certain embodiments, the AML is relapsed or refractory and is FLT3 mutation-positive. In certain embodiments, the patient has an NPM1 mutation.
- the disease or condition is a lymphoma, including, but not limited to, non-Hodgkin’s lymphoma or Hodgkin’s lymphoma. In certain embodiments, the disease or condition is multiple myeloma.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically salt thereof for use in therapy.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to the aberrant activity of a FLT3 in vivo.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in therapy.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I’) – (P5- Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to a mutation in the FLT3 gene in vivo.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for therapy.
- provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene.
- Useful diseases and conditions are described herein.
- compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in therapy.
- compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene.
- compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for therapy.
- compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene in vivo.
- Useful diseases and conditions are described herein.
- any of the aforementioned embodiments are some embodiments in which administration is enteral, parenteral, or both, and wherein (a) an effective amount of a provided compound is systemically administered to the mammal; (b) an effective amount of a provided compound is administered orally to the mammal; (c) an effective amount of a provided compound is intravenously administered to the mammal; (d) an effective amount of a provided compound is administered by inhalation; (e) an effective amount of a provided compound is administered by nasal administration; or (f) an effective amount of a provided compound is administered by injection to the mammal; (g) an effective amount of a provided compound is administered topically (dermal) to the mammal; (h) an effective amount of a provided compound is administered by ophthalmic administration; or (i) an effective amount of a provided compound is administered rectally to the mammal.
- any of the aforementioned embodiments are some embodiments comprising single administrations of an effective amount of a provided compound including some embodiments in which (i) a provided compound is administered once; (ii) a provided compound is administered to the mammal multiple times over the span of one day; (iii) continually; or (iv) continuously.
- some embodiments comprising multiple administrations of an effective amount of a provided compound, including some embodiments in which (i) a provided compound is administered in a single dose; (ii) the time between multiple administrations is every 6 hours; (iii) a provided compound is administered to the mammal every 8 hours.
- the method comprises a drug holiday, wherein the administration of the compound is temporarily suspended or the dose of the compound being administered is temporarily reduced; at the end of the drug holiday, dosing of the compound is resumed.
- the length of the drug holiday can vary from 2 days to 1 year.
- the treatment of proliferative disorders comprising the administration of at least one additional active agent selected from arsenic trioxide, asparaginase (pegylated or non-), bevacizumab, cetuximab, platinum-based compounds such as cisplatin, cladribine, daunorubicin/doxorubicin/idarubicin, irinotecan, fludarabine, 5-fluorouracil, gemtuzumab, methotrexate, PaclitaxelTM, taxol, temozolomide, thioguanine, or classes of drugs including hormones (an antiestrogen, an antiandrogen, or gonadotropin releasing hormone analogues), interferons such as alpha interferon, nitrogen mustards such as busulfan or melphalan or mechlorethamine, retinoids such as tretinoin, topoisomerase irreversible inhibitor
- arsenic trioxide asparaginase (pegy
- kits of manufacture including packaging material, a compound or composition thereof provided herein within the packaging material, and a label that indicates that the compound or composition is administered to treat a disease or condition.
- the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are irreversible inhibitors of FLT3 activity. In certain embodiments, such irreversible inhibitors have an IC50 below 10 microM in enzyme assay.
- a FLT3 inhibitor has an IC50 of less than 1 microM, and in some embodiments, less than 0.25 microM or even less than 0.025 microM.
- Reactions and purification techniques can be performed e.g., using kits of manufacturer’s specifications or as commonly accomplished in the art or as described herein.
- the foregoing techniques and procedures can be generally performed of conventional methods well known in the art and as described in various general and more specific references that are cited and discussed throughout the present specification.
- the methods and compositions described herein are not limited to the particular methodology, protocols, cell lines, constructs, and reagents described herein and as such may vary.
- the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the methods and compositions described herein, which will be limited only by the appended claims.
- Alkyl refers to a straight or branched hydrocarbon chain radical consisting solely of carbon and hydrogen atoms, containing no unsaturation, having from one to fifteen carbon atoms (e.g., C 1 -C 15 alkyl).
- an alkyl comprises one to thirteen carbon atoms (e.g., C 1 -C 13 alkyl).
- an alkyl comprises one to eight carbon atoms (e.g., C 1 -C 8 alkyl).
- an alkyl comprises five to fifteen carbon atoms (e.g., C 5 -C 15 alkyl).
- an alkyl comprises five to eight carbon atoms (e.g., C 5 -C 8 alkyl).
- the alkyl is attached to the rest of the molecule by a single bond, for example, methyl (Me), ethyl (Et), n-propyl (n-pr), 1-methylethyl (iso-propyl or i-Pr), n-butyl (n-Bu), n-pentyl, 1,1-dimethylethyl (t-butyl, or t-Bu), 3-methylhexyl, 2-methylhexyl, and the like.
- an alkyl group is optionally substituted as defined and described below and herein.
- alkyl could also be a “lower alkyl” having 1 to 6 carbon atoms.
- C 1 -C x includes C 1 -C 2 , C 1 -C 3 . .. C 1 -C x .
- Alkenyl refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one double bond, and having from two to twelve carbon atoms. In certain embodiments, an alkenyl comprises two to eight carbon atoms. In some embodiments, an alkenyl comprises two to four carbon atoms.
- alkenyl is attached to the rest of the molecule by a single bond, for example, ethenyl (i.e., vinyl), prop-1-enyl (i.e., allyl), but-1-enyl, pent-1-enyl, penta-1,4-dienyl, and the like. Unless stated otherwise specifically in the specification, an alkenyl group is optionally substituted as defined and described below and herein. [0047] “Alkynyl” refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one triple bond, having from two to twelve carbon atoms. In certain embodiments, an alkynyl comprises two to eight carbon atoms.
- an alkynyl has two to four carbon atoms.
- the alkynyl is attached to the rest of the molecule by a single bond, for example, ethynyl, propynyl, butynyl, pentynyl, hexynyl, and the like.
- an alkynyl group is optionally substituted as defined and described below and herein.
- Alkylene or “alkylene chain” refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing no unsaturation and having from one to twelve carbon atoms, for example, methylene, ethylene, propylene, n-butylene, and the like.
- the alkylene chain is attached to the rest of the molecule through a single bond and to the radical group through a single bond.
- the points of attachment of the alkylene chain to the rest of the molecule and to the radical group can be through one carbon in the alkylene chain or through any two carbons within the chain.
- alkylene chain is optionally substituted as defined and described below and herein.
- alkenylene or “alkenylene chain” refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing at least one double bond and having from two to twelve carbon atoms, for example, ethenylene, propenylene, n-butenylene, and the like.
- the alkenylene chain is attached to the rest of the molecule through a double bond or a single bond and to the radical group through a double bond or a single bond.
- alkenylene chain refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing at least one triple bond and having from two to twelve carbon atoms, for example, ethyne, propyne, butyne, and the like.
- alkenylene chain is attached to the rest of the molecule through a triple bond or a single bond and to the radical group through a triple bond or a single bond.
- the points of attachment of the alkynylene chain to the rest of the molecule and to the radical group can be through one carbon or any two carbons within the chain.
- an alkynylene chain is optionally substituted as defined and described below and herein.
- Aryl refers to a radical derived from an aromatic monocyclic or multicyclic hydrocarbon ring system by removing a hydrogen atom from a ring carbon atom.
- the aromatic monocyclic or multicyclic hydrocarbon ring system contains only hydrogen and carbon from six to eighteen carbon atoms, where at least one of the rings in the ring system is fully unsaturated, i.e., it contains a cyclic, delocalized (4n+2) ⁇ – electron system in accordance with the Hückel theory.
- Aryl groups include, but are not limited to, groups such as phenyl (Ph), fluorenyl, and naphthyl. Unless stated otherwise specifically in the specification, the term “aryl” or the prefix “ar-“ (such as in “aralkyl”) is meant to include aryl radicals optionally substituted as defined and described below and herein.
- “Aralkyl” refers to a radical of the formula -R c -aryl where R c is an alkylene chain as defined above, for example, benzyl, diphenylmethyl and the like.
- the alkylene chain part of the aralkyl radical is optionally substituted as described above for an alkylene chain.
- the aryl part of the aralkyl radical is optionally substituted as described above for an aryl group.
- “Aralkenyl” refers to a radical of the formula –R d -aryl where R d is an alkenylene chain as defined above.
- the aryl part of the aralkenyl radical is optionally substituted as described above for an aryl group.
- alkenylene chain part of the aralkenyl radical is optionally substituted as defined above for an alkenylene group.
- “Aralkynyl” refers to a radical of the formula -R e -aryl, where R e is an alkynylene chain as defined above.
- the aryl part of the aralkynyl radical is optionally substituted as described above for an aryl group.
- the alkynylene chain part of the aralkynyl radical is optionally substituted as defined above for an alkynylene chain.
- Carbocyclyl or “cycloalkyl” refers to a stable non-aromatic monocyclic or polycyclic hydrocarbon radical consisting solely of carbon and hydrogen atoms, which includes fused or bridged ring systems, having from three to fifteen carbon atoms.
- a carbocyclyl comprises three to ten carbon atoms.
- a carbocyclyl comprises five to seven carbon atoms. The carbocyclyl is attached to the rest of the molecule by a single bond.
- Carbocyclyl is optionally saturated, (i.e., containing single C-C bonds only) or unsaturated (i.e., containing one or more double bonds or triple bonds.)
- a fully saturated carbocyclyl radical is also referred to as “cycloalkyl.”
- monocyclic cycloalkyls include, e.g., cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl.
- An unsaturated carbocyclyl is also referred to as “cycloalkenyl.”
- Examples of monocyclic cycloalkenyls include, e.g., cyclopentenyl, cyclohexenyl, cycloheptenyl, and cyclooctenyl.
- Polycyclic carbocyclyl radicals include, for example, adamantyl, norbornyl (i.e., bicyclo[2.2.1]heptanyl), norbornenyl, decalinyl, 7,7-dimethyl-bicyclo[2.2.1]heptanyl, and the like.
- carbocyclyl is meant to include carbocyclyl radicals that are optionally substituted as defined and described below and herein.
- Halo or “halogen” refers to bromo, chloro, fluoro or iodo substituents.
- haloalkyl or “haloalkenyl,” “haloalkynyl” and “haloalkoxy” include alkyl, alkenyl, alkynyl and alkoxy structures in which at least one hydrogen is replaced with a halogen atom.
- Halogen atoms are all the same as one another. In some embodiments in which two or more hydrogen atoms are replaced with halogen atoms, the halogen atoms are not all the same as one another.
- “Fluoroalkyl” refers to an alkyl radical, as defined above, that is substituted by one or more fluoro radicals, as defined above, for example, trifluoromethyl, difluoromethyl, 2,2,2-trifluoroethyl, 1-fluoromethyl-2-fluoroethyl, and the like.
- non-aromatic heterocycle refers to a non-aromatic ring wherein one or more atoms forming the ring is a heteroatom.
- a “non- aromatic heterocycle” or “heterocycloalkyl” group refers to a cycloalkyl group that includes at least one heteroatom selected from nitrogen, oxygen and sulfur. The radicals may be fused with an aryl or heteroaryl.
- Heterocycloalkyl rings can be formed by three to 14 ring atoms, such as three, four, five, six, seven, eight, nine, or more than nine atoms. Heterocycloalkyl rings can be optionally substituted.
- non-aromatic heterocycles contain one or more carbonyl or thiocarbonyl groups such as, for example, oxo- and thio-containing groups.
- heterocycloalkyls include, but are not limited to, lactams, lactones, cyclic imides, cyclic thioimides, cyclic carbamates, tetrahydrothiopyran, 4H- pyran, tetrahydropyran, piperidine, 1,3-dioxin, 1,3-dioxane, 1,4-dioxin, 1,4-dioxane, piperazine, 1,3- oxathiane, 1,4-oxathiin, 1,4-oxathiane, tetrahydro-1,4-thiazine, 2H-1,2-oxazine, maleimide, succinimide, barbituric acid, thiobarbituric acid, dioxopiperazine, hydantoin, dihydrouracil, morpholine, trioxane, hexahydro-1,3,5-triazine, tetrahydrothiophene,
- heterocycloalkyl groups also referred to as non-aromatic heterocycles, include: and the like.
- heteroalicyclic also includes all ring forms of the carbohydrates, including but not limited to the monosaccharides, the disaccharides and the oligosaccharides.
- a heterocycloalkyl group can be a monoradical or a diradical (i.e., a heterocycloalkylene group).
- Heteroaryl refers to a radical derived from a 3- to 18-membered aromatic ring radical that comprises two to seventeen carbon atoms and from one to six heteroatoms selected from nitrogen, oxygen and sulfur.
- the heteroaryl radical is a monocyclic, bicyclic, tricyclic or tetracyclic ring system, wherein at least one of the rings in the ring system is fully unsaturated, i.e., it contains a cyclic, delocalized (4n+2) ⁇ –electron system in accordance with the Hückel theory.
- Heteroaryl includes fused or bridged ring systems.
- heteroaryl rings have five, six, seven, eight, nine, or more than nine ring atoms.
- the heteroatom(s) in the heteroaryl radical is optionally oxidized.
- One or more nitrogen atoms, if present, are optionally quaternized.
- heteroaryl is attached to the rest of the molecule through any atom of the ring(s).
- heteroaryls include, but are not limited to, azepinyl, acridinyl, benzimidazolyl, benzindolyl, 1,3-benzodioxolyl, benzofuranyl, benzooxazolyl, benzo[d]thiazolyl, benzothiadiazolyl, benzo[b][1,4]dioxepinyl, benzo[b][1,4]oxazinyl, 1,4-benzodioxanyl, benzonaphthofuranyl, benzoxazolyl, benzodioxolyl, benzodioxinyl, benzopyranyl, benzopyranonyl, benzofuranyl, benzofuranonyl, benzothienyl (benzothiophenyl), benzothieno[3,2-d]pyrimidinyl
- heteroaryl is meant to include heteroaryl radicals as defined above which are optionally substituted as defined and described below and herein.
- N-heteroaryl refers to a heteroaryl radical as defined above containing at least one nitrogen and where the point of attachment of the heteroaryl radical to the rest of the molecule is through a nitrogen atom in the heteroaryl radical.
- An N-heteroaryl radical is optionally substituted as described above for heteroaryl radicals.
- C-heteroaryl refers to a heteroaryl radical as defined above and where the point of attachment of the heteroaryl radical to the rest of the molecule is through a carbon atom in the heteroaryl radical. A C-heteroaryl radical is optionally substituted as described above for heteroaryl radicals.
- Epoxide refers to a three-membered cyclic ether. The epoxide is optionally substituted as defined and described below and herein.
- Heteroarylalkyl refers to a radical of the formula –R c -heteroaryl, where R c is an alkylene chain as defined above.
- heteroaryl is a nitrogen-containing heteroaryl
- the heteroaryl is optionally attached to the alkyl radical at the nitrogen atom.
- the alkylene chain of the heteroarylalkyl radical is optionally substituted as defined above for an alkylene chain.
- the heteroaryl part of the heteroarylalkyl radical is optionally substituted as defined above for a heteroaryl group.
- “Sulfanyl” refers to the -S- radical.
- Amino refers to the –NH 2 radical.
- Cyano refers to the -CN radical.
- Niro refers to the -NO 2 radical.
- Oxa refers to the -O- radical.
- An “alkoxy” group refers to a (alkyl)O- group, where alkyl is as defined herein.
- An “aryloxy” group refers to an (aryl)O- group, where aryl is as defined herein.
- Carbocyclylalkyl means an alkyl radical, as defined herein, substituted with a carbocyclyl group.
- Cycloalkylalkyl means an alkyl radical, as defined herein, substituted with a cycloalkyl group.
- Non-limiting cycloalkylalkyl groups include cyclopropylmethyl, cyclobutylmethyl, cyclopentylmethyl, cyclohexylmethyl, and the like.
- heteroalkyl As used herein, the terms “heteroalkyl,” “heteroalkenyl,” and “heteroalkynyl” include optionally substituted alkyl, alkenyl and alkynyl radicals in which one or more skeletal chain atoms is a heteroatom, e.g., oxygen, nitrogen, sulfur, silicon, phosphorus or combinations thereof.
- the heteroatom(s) may be placed at any interior position of the heteroalkyl group or at the position at which the heteroalkyl group is attached to the remainder of the molecule.
- heteroatom refers to an atom other than carbon or hydrogen. Heteroatoms are typically independently selected from among oxygen, sulfur, nitrogen, silicon and phosphorus, but are not limited to these atoms. In embodiments in which two or more heteroatoms are present, the two or more heteroatoms can all be the same as one another, or some or all of the two or more heteroatoms can each be different from the others.
- bond refers to a chemical bond between two atoms, or two moieties when the atoms joined by the bond are considered to be part of larger substructure.
- An “isocyanato” group refers to a -NCO group.
- An “isothiocyanato” group refers to a -NCS group.
- the term “moiety” refers to a specific segment or functional group of a molecule. Chemical moieties are often recognized chemical entities embedded in or appended to a molecule.
- a “thioalkoxy” or “alkylthio” group refers to a –S-alkyl group.
- alkylthioalkyl refers to an alkyl group substituted with a –S-alkyl group.
- Carboxy means a -C(O)OH radical.
- Acyl refers to the group -C(O)R.
- Cyanoalkyl means an alkyl radical, as defined herein, substituted with at least one cyano group.
- Aminocarbonyl refers to a -CONH 2 radical.
- “Hydroxyalkyl” refers to an alkyl radical, as defined herein, substituted with at least one hydroxy group.
- Non-limiting examples of a hydroxyalkyl include, but are not limited to, hydroxymethyl, 2- hydroxyethyl, 2-hydroxypropyl, 3-hydroxypropyl, 1-(hydroxymethyl)-2-methylpropyl, 2-hydroxybutyl, 3- hydroxybutyl, 4-hydroxybutyl, 2,3-dihydroxypropyl, 1-(hydroxymethyl)-2-hydroxyethyl, 2,3- dihydroxybutyl, 3,4-dihydroxybutyl and 2-(hydroxymethyl)-3-hydroxypropyl.
- Alkoxyalkyl refers to an alkyl radical, as defined herein, substituted with an alkoxy group, as defined herein.
- alkenyloxy refers to a (alkenyl)O- group, where alkenyl is as defined herein.
- Alkylaminoalkyl refers to an alkyl radical, as defined herein, substituted with an alkylamine, as defined herein.
- An “amide” is a chemical moiety with the formula -C(O)NHR or -NHC(O)R, where R is selected from among alkyl, cycloalkyl, aryl, heteroaryl (bonded through a ring carbon) and heteroalicyclic (bonded through a ring carbon).
- An amide moiety may form a linkage between an amino acid or a peptide molecule and a compound described herein, thereby forming a prodrug. Any amine, or carboxyl side chain on the compounds described herein can be amidified.
- esters refers to a chemical moiety with formula -COOR, where R is selected from among alkyl, cycloalkyl, aryl, heteroaryl (bonded through a ring carbon) and heteroalicyclic (bonded through a ring carbon). Any hydroxy, or carboxyl side chain on the compounds described herein can be esterified.
- ring refers to any covalently closed structure. Rings include, for example, carbocycles (e.g., aryls and cycloalkyls), heterocycles (e.g., heteroaryls and non-aromatic heterocycles), aromatics (e.g.
- Rings can be optionally substituted. Rings can be monocyclic or polycyclic.
- ring system refers to one, or more than one ring.
- membered ring can embrace any cyclic structure. The term “membered” is meant to denote the number of skeletal atoms that constitute the ring.
- cyclohexyl, pyridine, pyran and thiopyran are 6-membered rings and cyclopentyl, pyrrole, furan, and thiophene are 5-membered rings.
- fused refers to structures in which two or more rings share one or more bonds.
- compounds provided herein may be “optionally substituted”.
- substituted whether preceded by the term “optionally” or not, means that one or more hydrogens of a designated moiety are replaced with a suitable substituent.
- an “optionally substituted” group may have a suitable substituent at each substitutable position of the group, and when more than one position in any given structure may be substituted with more than one substituent selected from a specified group, the substituent may be either the same or different at every position.
- Combinations of substituents provided herein are preferably those that result in the formation of stable or chemically feasible compounds.
- stable refers to compounds that are not substantially altered when subjected to conditions to allow for their production, detection, and, in certain embodiments, their recovery, purification, and use for one or more of the purposes disclosed herein.
- Suitable monovalent substituents on R ⁇ are independently halogen, —(CH 2 ) 0 – 2 R • , – (haloR • ), –(CH 2 ) 0–2 OH, –(CH 2 ) 0–2 OR • , –(CH 2 ) 0–2 CH(OR • ) 2 ; -O(haloR • ), –CN, –N 3 , –(CH 2 ) 0–2 C(O)R • , – (CH 2 ) 0–2 C(O)OH, –(CH 2 ) 0–2 C(O)OR • , –(CH 2 ) 0–2 SR • , –(CH 2 ) 0–2 SH, –(CH 2 ) 0–2 NH 2 , –(CH 2 ) 0–2 NHR •
- Suitable divalent substituents that are bound to vicinal substitutable carbons of an “optionally substituted” group include: –O(CR * 2 ) 2 – 3 O–, wherein each independent occurrence of R * is selected from hydrogen, C 1–6 aliphatic which may be substituted as defined below, or an unsubstituted 5– 6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Suitable substituents on the aliphatic group of R * include halogen, –R • , -(haloR • ), -OH, –OR • , – O(haloR • ), –CN, –C(O)OH, –C(O)OR • , –NH 2 , –NHR • , –NR • 2, or –NO 2 , wherein each R • is unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C 1–4 aliphatic, –CH 2 Ph, –O(CH 2 ) 0 –1Ph, or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- Suitable substituents on a substitutable nitrogen of an “optionally substituted” group include –R ⁇ , -NR ⁇ 2, -C(O)R ⁇ , -C(O)OR ⁇ -C(O)C(O)R ⁇ -C(O)CH2C(O)R ⁇ -S(O) 2 R ⁇ -S(O) 2 NR 2 , -C(S)NR ⁇ 2, - C(NH)NR ⁇ 2, or –N(R ⁇ )S(O)2R ⁇ ; wherein each R ⁇ is independently hydrogen, C1–6 aliphatic which may be substituted as defined below, unsubstituted –OPh, or an unsubstituted 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the definition above, two independent occurrences of R ⁇ , taken together with their intervening atom
- Suitable substituents on the aliphatic group of R ⁇ are independently halogen, –R • , -(haloR • ), – OH, –OR • , –O(haloR • ), –CN, –C(O)OH, –C(O)OR • , –NH 2 , –NHR • , –NR • 2, or -NO 2 , wherein each R • is unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C 1–4 aliphatic, –CH 2 Ph, –O(CH 2 ) 0–1 Ph, or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
- nucleophile refers to an electron rich compound, or moiety thereof.
- electrophile refers to an electron poor or electron deficient molecule, or moiety thereof. Examples of electrophiles include, but in no way are limited to, Michael acceptor moieties.
- acceptable or “pharmaceutically acceptable”, with respect to a formulation, composition or ingredient, as used herein, means having no persistent detrimental effect on the general health of the subject being treated or does not abrogate the biological activity or properties of the compound, and is relatively nontoxic.
- amelioration of the symptoms of a particular disease, disorder or condition by administration of a particular compound or pharmaceutical composition refers to any lessening of severity, delay in onset, slowing of progression, or shortening of duration, whether permanent or temporary, lasting or transient that can be attributed to or associated with administration of the compound or composition.
- Bioavailability refers to the percentage of the weight of compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) dosed that is delivered into the general circulation of the animal or human being studied.
- the total exposure (AUC (0- ⁇ ) ) of a drug when administered intravenously is usually defined as 100% bioavailable (F%).
- Oral bioavailability refers to the extent to which compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are absorbed into the general circulation when the pharmaceutical composition is taken orally as compared to intravenous injection.
- Bood plasma concentration refers to the concentration of compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in the plasma component of blood of a subject.
- the plasma concentration of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary significantly between subjects, due to variability with respect to metabolism and/or possible interactions with other therapeutic agents.
- the blood plasma concentration of the compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary from subject to subject.
- values such as maximum plasma concentration (Cmax) or time to reach maximum plasma concentration (Tmax), or total area under the plasma concentration time curve (AUC(0- ⁇ )) may vary from subject to subject. Due to this variability, the amount necessary to constitute “a therapeutically effective amount” of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary from subject to subject.
- the terms “co-administration” or the like, as used herein, are meant to encompass administration of the selected therapeutic agents to a single patient, and are intended to include treatment regimens in which the agents are administered by the same or different route of administration or at the same or different time.
- the terms “effective amount” or “therapeutically effective amount,” as used herein, refer to a sufficient amount of an agent or a compound being administered which will relieve to some extent one or more of the symptoms of the disease or condition being treated. The result can be reduction and/or alleviation of the signs, symptoms, or causes of a disease, or any other desired alteration of a biological system.
- an “effective amount” for therapeutic uses is the amount of the composition including a compound as disclosed herein required to provide a clinically significant decrease in disease symptoms without undue adverse side effects.
- An appropriate “effective amount” in any individual case may be determined using techniques, such as a dose escalation study.
- the term “therapeutically effective amount” includes, for example, a prophylactically effective amount.
- An “effective amount” of a compound disclosed herein is an amount effective to achieve a desired pharmacologic effect or therapeutic improvement without undue adverse side effects.
- an effect amount or “a therapeutically effective amount” can vary from subject to subject, due to variation in metabolism of the compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd), age, weight, general condition of the subject, the condition being treated, the severity of the condition being treated, and the judgment of the prescribing physician.
- therapeutically effective amounts may be determined by routine experimentation, including but not limited to a dose escalation clinical trial.
- the terms “enhance” or “enhancing” means to increase or prolong either in potency or duration a desired effect.
- enhancing refers to the ability to increase or prolong, either in potency or duration, the effect of therapeutic agents on during treatment of a disease, disorder or condition.
- An “enhancing-effective amount,” as used herein, refers to an amount adequate to enhance the effect of a therapeutic agent in the treatment of a disease, disorder or condition. When used in a patient, amounts effective for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient’s health status and response to the drugs, and the judgment of the treating physician.
- the term “substantially identical,” as used herein, refers to two or more sequences which have a percentage of sequential units which are the same when compared and aligned for maximum correspondence over a comparison window, or designated region as measured using comparison algorithms or by manual alignment and visual inspection.
- two or more sequences may be “substantially identical” if the sequential units are about 60% identical, about 65% identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region. Such percentages to describe the “percent identity” of two or more sequences.
- the identity of a sequence can exist over a region that is at least about 75-100 sequential units in length, over a region that is about 50 sequential units in length, or, where not specified, across the entire sequence.
- This definition also refers to the complement of a test sequence.
- two or more polypeptide sequences are identical when the amino acid residues are the same, while two or more polypeptide sequences are “substantially identical” if the amino acid residues are about 60% identical, about 65% identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region.
- the identity can exist over a region that is at least about 75-100 amino acids in length, over a region that is about 50 amino acids in length, or, where not specified, across the entire sequence of a polypeptide sequence.
- two or more polynucleotide sequences are identical when the nucleic acid residues are the same, while two or more polynucleotide sequences are “substantially identical” if the nucleic acid residues are about 60% identical, about 65% identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region.
- the identity can exist over a region that is at least about 75-100 nucleic acids in length, over a region that is about 50 nucleic acids in length, or, where not specified, across the entire sequence of a polynucleotide sequence.
- isolated refers to separating and removing a component of interest from components not of interest. Isolated substances can be in either a dry or semi-dry state, or in solution, including but not limited to an aqueous solution.
- the isolated component can be in a homogeneous state or the isolated component can be a part of a pharmaceutical composition that comprises additional pharmaceutically acceptable carriers and/or excipients.
- nucleic acids or proteins are “isolated” when such nucleic acids or proteins are free of at least some of the cellular components with which it is associated in the natural state, or that the nucleic acid or protein has been concentrated to a level greater than the concentration of its in vivo or in vitro production.
- a gene is isolated when separated from open reading frames which flank the gene and encode a protein other than the gene of interest.
- a “metabolite” of a compound disclosed herein is a derivative of that compound that is formed when the compound is metabolized.
- active metabolite refers to a biologically active derivative of a compound that is formed when the compound is metabolized.
- cytochrome P450 catalyzes a variety of oxidative and reductive reactions while uridine diphosphate glucuronyl transferases catalyze the transfer of an activated glucuronic-acid molecule to aromatic alcohols, aliphatic alcohols, carboxylic acids, amines and free sulfhydryl groups.
- Metabolites of the compounds disclosed herein can be identified either by administration of compounds to a host and analysis of tissue samples from the host, or by incubation of compounds with hepatic cells in vitro and analysis of the resulting compounds. Both methods are well known in the art.
- metabolites of a compound are formed by oxidative processes and correspond to the corresponding hydroxy-containing compound.
- a compound is metabolized to pharmacologically active metabolites.
- modulate means to interact with a target either directly or indirectly so as to alter the activity of the target, including, by way of example only, to enhance the activity of the target, to inhibit the activity of the target, to limit the activity of the target, or to extend the activity of the target.
- modulator refers to a compound that alters an activity of a molecule.
- a modulator can cause an increase or decrease in the magnitude of a certain activity of a molecule compared to the magnitude of the activity in the absence of the modulator.
- a modulator is an inhibitor, which decreases the magnitude of one or more activities of a molecule.
- an inhibitor completely prevents one or more activities of a molecule.
- a modulator is an activator, which increases the magnitude of at least one activity of a molecule. In certain embodiments the presence of a modulator results in an activity that does not occur in the absence of the modulator.
- the term “irreversible inhibitor,” as used herein, refers to a compound that, upon contact with a target protein (e.g., FLT3) causes the formation of a new covalent bond with or within the protein, whereby one or more of the target protein’s biological activities (e.g., phosphotransferase activity) is diminished or abolished notwithstanding the subsequent presence or absence of the irreversible inhibitor.
- a reversible inhibitor compound upon contact with a target protein does not cause the formation of a new covalent bond with or within the protein and therefore can associate and dissociate from the target potein.
- the term “irreversible inhibitor of FLT3 protein-proten interaction” as used herein refers to an inhibitor of FLT3 that can form a covalent bond with an amino acid residue of FLT3.
- the irreversible inhibitor of FLT3 can form a covalent bond with a Cys residue of FLT3 ; in particular embodiments, the irreversible inhibitor can form a covalent bond with a Cys 12 residue (or a homolog thereof) of FLT3.
- prophylactically effective amount refers that amount of a composition applied to a patient that will relieve to some extent one or more of the symptoms of a disease, disease or condition being treated. In such prophylactic applications, such amounts may depend on the patient’s state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation, including, but not limited to, a dose escalation clinical trial.
- selective binding compound refers to a compound that selectively binds to any portion of one or more target proteins.
- the term “selectively binds” refers to the ability of a selective binding compound to bind to a target protein, such as, for example, FLT3 , with greater affinity than it binds to a non-target protein.
- specific binding refers to binding to a target with an affinity that is at least 10, 50, 100, 250, 500, 1000 or more times greater than the affinity for a non-target.
- selective modulator refers to a compound that selectively modulates a target activity relative to a non-target activity.
- specific modulater refers to modulating a target activity at least 10, 50, 100, 250, 500, 1000 times more than a non-target activity.
- the term “substantially purified,” as used herein, refers to a component of interest that may be substantially or essentially free of other components which normally accompany or interact with the component of interest prior to purification.
- a component of interest may be “substantially purified” when the preparation of the component of interest contains less than about 30%, less than about 25%, less than about 20%, less than about 15%, less than about 10%, less than about 5%, less than about 4%, less than about 3%, less than about 2%, or less than about l% (by dry weight) of contaminating components.
- a “substantially purified” component of interest may have a purity level of about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 96%, about 97%, about 98%, about 99% or greater.
- subject or “patient” as used herein, refers to an animal which is the object of treatment, observation, or experiment.
- a subject may be, but is not limited to, a mammal including, but not limited to, a human.
- target activity refers to a biological activity capable of being modulated by a selective modulator.
- target activities include, but are not limited to, binding affinity, signal transduction, enzymatic activity, tumor growth, inflammation, or inflammation- related processes, and amelioration of one or more symptoms associated with a disease or condition.
- target protein refers to a molecule or a portion of a protein capable of being bound by a selective binding compound.
- a target protein is FLT3.
- treat include alleviating, abating or ameliorating a disease or condition symptoms, preventing additional symptoms, ameliorating or preventing the underlying metabolic causes of symptoms, inhibiting the disease or condition, e.g., arresting the development of the disease or condition, relieving the disease or condition, causing regression of the disease or condition, relieving a condition caused by the disease or condition, or stopping the symptoms of the disease or condition.
- the terms “treat,” “treating” or “treatment”, include, but are not limited to, prophylactic and/or therapeutic treatments.
- FLT3 refers to fms-like tyrosine kinase 3, gene or protein. Synonyms include CD135, CD135 antigen, fetal liver kinase 2, FL cytokine receptor, FLK-2, FLK2, FLT3_HUMAN, fms-related tyrosine kinase 3, growth factor receptor tyrosine kinase type III, receptor- type tyrosine-protein kinase FLT3, stem cell tyrosine kinase 1, STK-1, and STK1.
- the IC50 refers to an amount, concentration, or dosage of a particular test compound that achieves a 50% inhibition of a maximal response, such as inhibition of FLT3 , in an assay that measures such response.
- EC 50 refers to a dosage, concentration, or amount of a particular test compound that elicits a dose-dependent response at 50% of maximal expression of a particular response that is induced, provoked or potentiated by the particular test compound.
- Methods described herein include administering to a subject in need a composition containing a therapeutically effective amount of one or more FLT3 inhibitor compounds described herein.
- methods described herein can be used to treat a cancer, e.g., B-cell proliferative disorders, which include, but are not limited to diffuse large B cell lymphoma, follicular lymphoma, chronic lymphocytic lymphoma, chronic lymphocytic leukemia, B-cell prolymphocytic leukemia, lymphoplasmacytic lymphoma/Waldenström macroglobulinemia, splenic marginal zone lymphoma, plasma cell myeloma, plasmacytoma, extranodal marginal zone B cell lymphoma, nodal marginal zone B cell lymphoma, mantle cell lymphoma, mediastinal (thymic) large B cell lymphoma, intravascular large B cell lymphoma, primary effusion lymphoma, burkitt lymphoma/leukemia, and lymphomatoid granulomatosis.
- B-cell proliferative disorders include, but are not limited to diffuse large B cell lymphoma,
- the therapeutic efficacy of a provided compound for one of the foregoing diseases can be optimized during a course of treatment.
- a subject being treated can undergo a diagnostic evaluation to correlate the relief of disease symptoms or pathologies to inhibition of in vivo FLT3 activity achieved by administering a given dose of a FLT3 inhibitor.
- Compounds [00152] In the following description of FLT3 inhibitor compounds suitable for use in the methods described herein, definitions of referred-to standard chemistry terms may be found in reference works (if not otherwise defined herein), including Carey and Sundberg “Advanced Organic Chemistry 4th Ed.” Vols. A (2000) and B (2001), Plenum Press, New York.
- FLT3 inhibitor compounds can be used for the manufacture of a medicament for treating any of the foregoing conditions (e.g., hematological malignancies).
- the FLT3 inhibitor compound used for the methods described herein inhibits FLT3 activity with an in vitro IC 50 of less than about 10 ⁇ M (e.g., less than about 1 ⁇ M, less than about 0.5 ⁇ M, less than about 0.4 ⁇ M, less than about 0.3 ⁇ M, less than about 0.1 ⁇ M, less than about 0.08 ⁇ M, less than about 0.06 ⁇ M, less than about 0.05 ⁇ M, less than about 0.04 ⁇ M, less than about 0.03 ⁇ M, less than about 0.02 ⁇ M, less than about 0.01 ⁇ M, less than about 0.008 ⁇ M, less than about 0.006 ⁇ M, less than about 0.005 ⁇ M, less than about 0.004 ⁇ M, less than about 0.003 ⁇ M, less than about 0.002 ⁇ M, less than about 0.001 ⁇ M, less than about 0.00099 ⁇ M, less than about 0.00098 ⁇ M, less than about 0.00097 ⁇
- the FLT3 inhibitor is selective for FLT3. In some embodiments, the FLT3 inhibitor is selective for FLT3 over cKit. [00155] Also described herein are methods for synthesizing such irreversible inhibitors, methods for using such irreversible inhibitors in the treatment of diseases (including diseases wherein inhibition of FLT3 provides therapeutic benefit to a patient having the disease). Further described are pharmaceutical compositions that include an inhibitor of FLT3. [00156] Specifically described herein are irreversible inhibitors of FLT3 that form a covalent bond with a cysteine residue on FLT3. Further described herein are irreversible inhibitors of FLT3 that form a covalent bond with a Cys12 residue on FLT3.
- Irreversible inhibitor compounds described herein include a Michael acceptor moiety. Also described are pharmaceutical formulations that include an irreversible inhibitor of FLT3.
- a reversible or irreversible inhibitor compound of FLT3 used in the methods described herein is identified or characterized in an in vitro assay, e.g., an acellular biochemical assay or a cellular functional assay. Such assays are useful to determine an in vitro IC50 for a reversible or irreversible FLT3 inhibitor compound.
- covalent complex formation between FLT3 and a candidate irreversible FLT3 inhibitor is a useful indicator of irreversible inhibition of FLT3 that can be readily determined by a number of methods known in the art (e.g., mass spectrometry).
- some irreversible FLT3 -inhibitor compounds can form a covalent bond with Cys 12 of FLT3 GC12 (e.g., via a Michael reaction). See S. Xu et al. Angewandte Chemie International Ed. 57(6), 1601-1605 (2017) (incorporated by reference in its entirety).
- Described herein are compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd).
- pharmaceutically acceptable salts, pharmaceutically acceptable solvates, pharmaceutically active metabolites, and pharmaceutically acceptable prodrugs of such compounds are provided.
- the nitrogen atom when compounds disclosed herein contain an oxidizable nitrogen atom, the nitrogen atom can be converted to an N-oxide by methods well known in the art.
- isomers and chemically protected forms of compounds having a structure represented by any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are also provided.
- FLT3 irreversible inhibitors according to compounds of Formula (P-I).
- R 1 is H,
- R 5 is Cy.
- R 5 is substituted or unsubstituted C 1-6 alkyl.
- R 5 is C 1-6 alkyl, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C 1-6 alkoxy.
- R 5 is C 1-6 alkyl, substituted with F, CN, OMe, or OEt.
- R 5 is C 1-6 alkoxy, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C 1-6 alkoxy. In certain embodiments, R 5 is C 1-6 alkoxy, substituted with F, CN, OMe, or OEt. In certain embodiments, R 5 is alkylamino, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C 1-6 alkoxy. In certain embodiments, R 5 is alkylamino, substituted with F, CN, OMe, or OEt.
- R 5 is N(H)(Me), N(H)(Et), or N(H)(iPr).
- R 5 is dialkylamino, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C 1-6 alkoxy.
- R 5 is dialkylamino, substituted with F, CN, OMe, or OEt.
- R 5 is N(Me) 2 .
- R 5 is Cy.
- R 5 is cyclopropyl, cyclobutyl or cyclopentyl.
- R 1 is Me.
- R 1 is Et.
- R 7 is F, Cl, Me, Et, or OMe.
- R 7 is H.
- FLT3 irreversible inhibitors according to compounds of Formula (I).
- X is a single bond, -O-, or -NR 2a -;
- L 1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C 2 -C 4 alkenylene; substituted or unsubstituted C 2 -C 4 alkynylene; Cy is substituted or unsubstituted heterocycloalkyl;
- R 1 is H, halo, CN, substituted or unsubstituted C 1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl;
- R 2a is H or C 1 -C 4 alkyl;
- L 1 is substituted or unsubstituted C 2 -C 4 alkylene, substituted or unsubstituted C 2 -C 4 alkenylene; substituted or unsubstituted C 2 -C 4 alkynylene.
- L 1 is a single bond, substituted or unsubstituted C 1 -C 4 alkylene, substituted or unsubstituted C 2 -C 4 alkenylene; substituted or unsubstituted C 2 -C 4 alkynylene.
- Y is -C(R 2e R 2f )-. In certain embodiments, Y is -CH 2 -, -C(Me)H, CMe 2 , CHF, or CF 2 . In certain embodiments, Y is -O-. In certain embodiments, Y is -NR 2g -. In certain embodiments, Y is -NMe-. In certain embodiments, Y is -NH-. [00176] In certain embodiments, each R 2c and R 2d is independently H or alkyl.
- each R 2c and R 2d is independently H or Me. In certain embodiments, R 2c is H; and R 2d is Me. In certain embodiments, R 2c and R 2d may join together to form a 4-6 membered heterocycloalkyl. In certain embodiments, each R 2c and R 2d is H. [00177] In certain embodiments, the compound is according to Formula (IIa) or (IIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00178] In certain embodiments, Cy is unsubstituted cycloalkyl. In certain embodiments, Cy is cycloalkyl, substituted with alkyl, or halo.
- Cy is cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, or cycloheptyl. [00179] In certain embodiments, Cy is unsubstituted heterocycloalkyl. In certain embodiments, Cy is heterocycloalkyl, substituted with alkyl, or halo. In certain embodiments, Cy is azetidinyl, azepinyl, pyrrolidinyl, piperidinyl, tetrahydrofuranyl, or tetrahydropyranyl. In certain embodiments, Cy is tetrahydropyranyl.
- Y-R 5 is H, halo, substituted or unsubstituted C 1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C 1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino, substituted or unsubstituted dialkylamino, heterocycloalkyl, substituted or unsubstituted phenyl, or substituted or unsubstituted heteroaryl.
- Y-R 5 is H. In certain embodiments, Y-R 5 is halo.
- Y-R 5 is F, or Cl. In certain embodiments, Y-R 5 is substituted or unsubstituted C 1-6 alkyl. Y- R 5 is Me, Et, i-Pr, n-Bu, or i-Bu. In certain embodiments, Y-R 5 is substituted or unsubstituted haloalkyl. In certain embodiments, Y-R 5 is CF3, CHF2, OCF3, or OCHF2. In certain embodiments, Y-R 5 is substituted or unsubstituted C 1-6 alkoxy. In certain embodiments, Y-R 5 is OMe, OEt, or O-i-Pr.
- Y-R 5 is substituted or unsubstituted alkylamino or substituted or unsubstituted dialkylamino. In certain embodiments, Y-R 5 is NHMe, NMe2, NHEt, NEt2, N(i-Pr)H, or N(i-Pr)Me. In certain embodiments, Y-R 5 is substituted or unsubstituted cycloalkyl. In certain embodiments, Y-R 5 is cyclopropyl, cyclobutyl, cyclopentyl, or cyclohexyl. Y-R 5 is substituted or unsubstituted heterocycloalkyl.
- Y-R 5 is azetidinyl, pyrrolidinyl, piperidinyl, morpholinyl, or piperazinyl.
- the compound is according to Formula (IIIa) or (IIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 1 is halo, CN, substituted or unsubstituted C 1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl.
- R 1 is halo, CN, substituted or unsubstituted C 1-6 alkyl. In certain embodiments, R 1 is substituted or unsubstituted C 1-6 alkyl. In certain embodiments, R 1 is Cl, F, CN, Me, Et, n-Pr, i-Pr, n-Bu, i-Bu, t-Bu, CHF 2 , or CF 3 . In certain embodiments, R 1 is Me. In certain embodiments, R 1 is Et. In certain embodiments, R 1 is H. In certain embodiments, R 1 is substituted or unsubstituted cycloalkyl.
- R 1 is cyclopropyl, cyclobutyl, cyclopentyl, or cyclohexyl, each unsubstituted or substituted with halo, or alkyl.
- the compound is according to Formula (IVa) or (IVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- X is O.
- the compound is according to Formula (Va) or (Vb):
- the compound is according to Formula (VIa) or (VIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (VIIa) or (VIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 1 is substituted or unsubstituted C 2 -C 4 alkylene. In certain embodiments, L 1 is C 2 -C 4 alkylene, unsubstituted or substituted with halo, hydroxy, or alkyl.
- L 1 is unsubstituted C 2 -C 4 alkylene. In certain embodiments, L 1 is -CH 2 - CH 2 -, -CH 2 -CH 2 -CH 2 -, or -CH 2 -CH 2 -CH 2 -CH 2 -. In certain embodiments, L 1 is -CH 2 -CH 2 -. In certain embodiments, L 1 is -CH 2 -CH 2 -CH 2 -. In certain embodiments, L 1 is -CH 2 -CH 2 -CH 2 -CH 2 -. [00192] In certain embodiments, L 2 is a single bond.
- L 2 is –C(O)-L 3 -NR 2b -. In certain embodiments, L 2 is –C(O)-L 3 -NH-. In certain embodiments, L 2 is –C(O)-L 3 -N(CH 3 )-. [00193] In certain embodiments, L 1 is unsubstituted C 2 -C 4 alkylene and L 2 is –C(O)-L 3 -NR 2b -. In certain embodiments, L 1 is unsubstituted C 2 -C 4 alkylene and and L 2 is –C(O)-L 3 -NR 2b -.
- L 1 is -CH 2 -CH 2 -, -CH 2 -CH 2 -CH 2 -, or -CH 2 -CH 2 -CH 2 - and and L 2 is –C(O)-CH(CH 3 )-NH-.
- the compound is according to Formula (VIIIa) or (VIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (VIIIc) or (VIIId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (IXa) or (IXb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (Xa),(Xb), (Xc), or (Xd): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XIa) or (XIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- X is a single bond; and L 1 is substituted or unsubstituted C 2 -C 4 alkynyl.
- X is a single bond; and L 1 is -C ⁇ C-CH 2 -.
- the compound is according to Formula (XIIa) or (XIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 2 is a single bond.
- the compound is according to Formula (XIIIa) or (XIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XIVa) or (XIVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XVa) or (XVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XVIa) or (XVIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XVIIa) or (XVIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 2b is H. In certain embodiments, R 2b is Me.
- the compound is according to Formula (XVIIIa) or (XVIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XIXa) or (XIXb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXa) or (XXb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXIa) or (XXIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXIIa) or (XXIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXIIIa) or (XXIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXIVa) or (XXIVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 3 is -CH 2 -, -C(Me)H-, or -CH 2 -CH 2 -, -CH 2 -CH 2 -CH 2 -. [00217] In certain embodiments, L 3 is -C(Me)H-, -C(Me) 2 -, . [00218] In certain embodiments, L 3 is -C(Me)H-. [00219] In certain embodiments, the compound is according to Formula (XXVa) or (XXVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXVIa) or (XXVIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXVIIa) or (XXVIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXVIIIa) or (XXVIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXIXa) or (XXIXb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXXa) or (XXXb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XXXIa) or (XXXIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLa) or (XLb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 7 is H. In certain embodiments, R 7 is C1-4 alkyl, C1-4alkoxy, haloalkyl, halo, or CN. In certain embodiments, R 7 is Me, Et, i-Pr, n-Pr, CHF2, CF3, OMe, OCF3, F, Cl, or CN. In certain embodiments, R 7 is OMe. In certain embodiments, R 7 is at 3-position or m- to N(H)-pyrimidinyl.
- the compound is according to Formula (XXXIIa), (XXXIIb), (XXXIIc), (XXXIId), (XXXIIe), (XXXIIf), (XXXIIg), or (XXXIIh): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLIa) or (XLIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLIIa) or (XLIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- X is a single bond, Y is absent; and the compound is according to Formula (P5-I'): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- X is a single bond, Y is absent, each of A 1 , A 2 , A 3 , and A 4 , is independently CR 7 .
- X is a single bond, Y is absent, one of A 1 , A 2 , A 3 , and A 4 , is N, and others are independently CR 7 .
- X is a single bond, Y is absent, A 3 is N, and others are independently CR 7 .
- X is a single bond, Y is absent, A 4 is N, and others are independently CR 7 .
- X is a single bond, Y is absent, each of A 1 , A 2 , and A 4 , is CH, and A 4 is CR 7 ; and the compound is according to Formula (P4-I): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- X is a single bond, Y is absent, and the compound is according to Formula (P5-Ia), and (P5-Ib): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 1 is substituted or unsubstitued ethylene. In certain embodiments, L 1 is unsubstitued ethylene. [00236] In certain embodiments, the compound is according to Formula (P4-II): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00237] In certain embodiments, the compound is according to Formula (P5-IIa) or (P5-IIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00238] In certain embodiments, L 1 is ethylene, substituted with Me, Et, i-Pr, dimethyl, OH, or methoxy.
- the compound is according to (P4-IIIa) or (P4-IIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to (P5-IIIa), (P5-IIIb), (P5-IIIc) or (P5-IIId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 3 is -CH 2 -.
- the compound is according to Formula (P4-IVa) or (P4-IVb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (P5-IVa), (P5-IVb), (P5-IVc) or (P5-IVd): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- L 3 is -CH(Me)-, or C(Me) 2 -.
- the compound is according to Formula (P4-Va) or (P4-Vb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (P5-Va), (P5-Vb), (P5-Vc) or (P5-Vd): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 2b is H or Me.
- the compound is according to Formula (P2-I): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 7 is H, Me, Et, Cl, F, or OMe. In certain embodiments, R 7 is H.
- R 1 is Me or Et.
- R 5 is cyclopropyl, Me, Et, N(Me) 2 , or N(i-Pr)(Me).
- R 1 is Me or Et and R 5 is cyclopropyl, Me, Et, N(Me) 2 , or N(i-Pr)(Me).
- R 1 is Me or Et, R 5 is cyclopropyl, Me, Et, N(Me) 2 , or N(i-Pr)(Me), and R 7 is H.
- the compound is according to Formula (XLIIIa), (XLIIIb), (XLIIIc) or (XLIIId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLIVa), (XLIVb), (XLIVc), or (XLIVd): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVa), (XLVb), (XLVc) or (XLVd): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVIa), (XLVIb), (XLVIc), (XLVId), (XLVIe) or (XLVIf): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVIm), (XLVIn), (XLVIo), (XLVIp), (XLVIq) or (XLVIr): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVIIa) or (XLVIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVIIIa), (XLVIIIb), (XLVIIIc), or (XLVIIId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (XLVIIIe), (XLVIIIf), (XLVIIIg), or (XLVIIIh): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (La) or (Lb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (LIa) or (LIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof; wherein each R 11a and R 11b is independently Me, Et, or i-Pr.
- the compound is according to Formula (LIIa), (LIIb), (LIIc), (LIId), (LIIe) or (LIIf): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the Et group when present, is replaced with Me.
- the compound is according to Formula (LXa), (LXb), (LXc), (LXd), (LXe) or (LXf): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (LXIa), (LXIb), (LXIc), or (LXId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (LXIIa), (LXIIb), (LXIIc), or (LXIId): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- the compound is according to Formula (LXIIIa), or (LXIIIb): or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
- R 5 is as described for Formula P-I.
- R 5 is cyclopropyl, Me, Et, N(Me) 2 , or N(i-Pr)(Me). In certain embodiments, R 5 is NHMe, NH(CH(CH 2 CH 3 ) 2 ), or NH(cycloalkyl) wherein the cycloalkyl is substituted with 1 or 2 fluoro groups. [00268] In certain embodiments, with respect to Formulas (P-I), (P2-I), (I)-(LXIIIb), (P4-I)-(P4-Vb), and (P5-I')-(P5-Vd), the -CONH 2 group is replaced with -CON(H)Me.
- X is O.
- X is -NR 2a -.
- X is -NR 2a -; and R 2a is H, Me, Et, or i-Pr.
- X is -NR 2a -; and R 2a is H.
- X is a single bond.
- L 1 is substituted or unsubstituted C 1 -C 4 alkylene. In certain embodiments, L 1 is C 2 -C 4 alkylene, unsubstituted or substituted with halo, hydroxy, or alkyl. In certain embodiments, L 1 is unsubstituted C 1 -C 4 alkylene. In certain embodiments, L 1 is unsubstituted C 2 -C 4 alkylene. In certain embodiments, L 1 is -CH 2 -CH 2 -, -CH 2 -CH 2 -CH 2 -, or -CH 2 -CH 2 -CH 2 -CH 2 -.
- L 1 is -CH 2 -CH 2 -. In certain embodiments, L 1 is -CH 2 -CH 2 -CH 2 -. In certain embodiments, L 1 is -CH 2 -CH 2 -CH 2 -. [00272] In certain embodiments, L 2 is a single bond. In certain embodiments, L 2 is –C(O)-L 3 -NR 2b -. In certain embodiments, L 2 is –C(O)-L 3 -NH-. In certain embodiments, L 2 is –C(O)-L 3 -N(CH 3 )-. [00273] In certain embodiments, L 3 is unsubstituted C 1 -C 4 alkylene.
- L 3 is unsubstituted C 2 -C 4 alkylene. In certain embodiments, L 3 is unsubstituted C 1 alkylene. In certain embodiments, L 3 is unsubstituted C 2 alkylene. In certain embodiments, L 3 is unsubstituted C 3 alkylene.
- R 2b is C 1 -C 4 alkyl. In certain embodiments, R 2b is methyl.
- R 7 is hydrogen.
- each of R 6a , R 6b , and R 6c is H.
- each of R 6a and R 6b is H or F; and R 6c is substituted or unsubstituted alkyl.
- one of R 6a and R 6b is CN, the other is H; and R 6c is H, or substituted or unsubstituted alkyl.
- each of R 6a and R 6b is H; and R 6c is unsubstituted alkyl.
- each of R 6a and R 6b is H; and R 6c is Me, or Et. In certain embodiments, each of R 6a and R 6b is H; and R 6c is alkyl substituted with amino, alkylamino or dialkylamino. In certain embodiments, each of R 6a and R 6b is H; and R 6c is alkyl substituted with NH 2 , NHCH 3 or N(CH 3 ) 2 . In certain embodiments, each of R 6a and R 6b is H; and R 6c is alkyl substituted with dimethylamino. In certain embodiments, each of R 6a and R 6b is H; and R 6c is –CH 2 NMe 2 .
- R 6a and R 6b form a bond (thereby forming a triple bond); and R 6c is H or substituted or unsubstituted alkyl. In certain embodiments, R 6a and R 6b form a bond (thereby forming a triple bond); and R 6c is Me. In certain embodiments, each of R 6a and R 6b is H; and R 6c is –(CH 2 ) q - heterocycloalkyl; and q is 1, 2, 3, or 4. In certain embodiments, each of R 6a and R 6b is H; and R 6c is – (CH 2 ) q -heterocycloalkyl; and q is 1.
- each of R 6a and R 6b is H; and R 6c is —(CH 2 ) q - heterocycloalkyl; and q is 2. In certain embodiments, each of R 6a and R 6b is H; and R 6c is –(CH 2 ) q - heterocycloalkyl; and q is 3. In certain embodiments, heterocycloalkyl is substituted or unsubstituted azetidinyl, pyrrolidinyl, piperidinyl, or azepinyl.
- heterocycloalkyl is azetidin-1- yl, pyrrolidin-1-yl, piperidin-1-yl, or azepin-1-yl. In certain embodiments, heterocycloalkyl is substituted azetidin-1-yl substituted with 1 or 2 fluoro groups.
- each of R 6a and R 6b is H or Me; and R 6c is –CH 2 -azetidin-1-yl, -CH 2 -pyrrolidin-1-yl, or –CH 2 -piperidin-1-yl.
- each of R 6a and R 6b is H or Me; and R 6c is –CH 2 -azetidin-1-yl wherein the azetidin-1-yl is substituted with 1 or 2 fluoro groups.
- one of R 6a , and R 6b is F; and R 6c is H or unsubstituted alkyl.
- one of R 6a , and R 6b is F; and R 6c is Me, or Et.
- one of R 6a , and R 6b is F; and R 6c is alkyl substituted with amino, alkylamino or dialkylamino.
- R 6a , and R 6b are F; the other is H; and R 6c is H.
- R 1a is Me, Et, or i-Pr. In certain embodiments, R 1a is Me.
- R 4 is unsubstituted epoxide. In certain embodiments, R 4 is epoxide substituted with alkyl.
- R 4 is epoxide substituted with Me, Et, i-Pr, or n-Pr.
- R 4 is –C(O)-C ⁇ CR 6c .
- R 4 is –C(O)-C ⁇ CH. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R 4 is –C(O)-C ⁇ CH 3 .
- R 4 is .
- R 6c is H. In certain embodiments, R 6c is substituted or unsubstituted alkyl. In certain embodiments, R 6c is H, or substituted or unsubstituted alkyl. In certain embodiments, R 6c is unsubstituted alkyl. In certain embodiments, R 6c is Me, or Et. [00285] In certain embodiments, R 6c is alkyl substituted with amino, alkylamino or dialkylamino. In certain embodiments, R 6c is alkyl substituted with dimethylamino.
- R 6c is – CH 2 NMe 2 . In certain embodiments, R 6c is H or substituted or unsubstituted alkyl. In certain embodiments, R 6c is Me. In certain embodiments, R 6c is –(CH 2 ) q -heterocycloalkyl; and q is 1, 2, 3, or 4. In certain embodiments, R 6c is –(CH 2 )q-heterocycloalkyl; and q is 1. In certain embodiments, R 6c is –(CH 2 )q- heterocycloalkyl; and q is 2. In certain embodiments, R 6c is –(CH 2 )q-heterocycloalkyl; and q is 3.
- -S(O)-B-C(R 6a ) C(R 6b )-C(O)-R 6c
- - S(O) 2 -B-C(R 6a ) C(R 6b ) -C(O)-R 6c .
- R 6c is substituted or unsubstituted alkoxy.
- R 6c is substituted or unsubstituted OMe, OEt, O-i-Pr, or O-t-Bu.
- R 6c is OMe, OEt, O-i-Pr, or O-t-Bu.
- R 6c is substituted or unsubstituted heterocycloalkyl. In certain embodiments, R 6c is substituted or unsubstituted azetidinyl, pyrrolidinyl, piperidinyl, or azepinyl. In certain embodiments, R 6c is azetidin-1-yl, pyrrolidin-1-yl, piperidin-1-yl, or azepin-1-yl. In certain embodiments, R 6c is piperidin-1-yl. In certain embodiments, R 6c is substituted or unsubstituted amino. In certain embodiments, R 6c is substituted amino. In certain embodiments, R 6c is dialkylamino.
- R 6c is dimethylamino, diethylamino, N-isopropyl-N-methylamino, or N-isopropyl-N-ethylamino. In certain embodiments, R 6c is dimethylamino. [00289] In some embodiments, the compound is: . [00290] In some particular embodiments, the compound is any compound selected from Table 2A or Table 2B, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00291] In some particular embodiments, the compound is any of compounds listed below in Table 1, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof: Table 1.
- the compound is any of compounds listed below, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof: [00293] In some particular embodiments, the compound is any compound selected from Compound #163, 164, 202, 203, 213, 224, 226, 227, 228, 230, 232, 233, 241, and 247, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00294] In some particular embodiments, the compound is any compound selected from Compound #135, 149, 156, 158, 159, and 160, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is any compound selected from Compound #142A, 204, 219, 221, 228, 232, and 246 or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. In some particular embodiments, the compound is any compound selected from Compound #142A, 204, 228, and 232 or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00296] In some particular embodiments, the compound is any compound selected from Compound #142A, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00297] In some particular embodiments, the compound is any compound selected from Compound #228, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is any compound selected from Compound #204, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00299] In some particular embodiments, the compound is any compound selected from Compound #232, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00300] In some particular embodiments, the compound is any one compound selected from: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00301] In some particular embodiments, the compound is any one compound selected from: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00302] In some particular embodiments, the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- the compound is: or a pharmaceutically acceptable salt or solvate or stereoisomer thereof.
- Certain embodiments of the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) display improved potency against FLT3 with IC50 values of as low as less than 1 nM or less than 0.1 nM, and/or high occupancy of active site of FLT3 (e.g., more than 50 %, 70 % or 90% occupancy) at low dosages of below 5 mg/kg (e.g., at or below 3 mg/kg) when administered in vivo (e.g., in rats).
- a pharmaceutical composition comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a pharmaceutical composition comprising a therapeutically effective amount of a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd), and a pharmaceutically acceptable excipient.
- the pharmaceutical composition is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, or rectal administration.
- provided herein are methods for treating an proliferative disease or condition comprising administering to a patient in need the pharmaceutical composition provided herein.
- the patient has one or more FLT3 mutations.
- the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof.
- the FLT3 mutation is N676K.
- the FLT3 mutation is F691L.
- the FLT3 mutation is D835H.
- the FLT3 mutation is D835V.
- the FLT3 mutation is D835Y.
- the FLT3 mutation is Y842C.
- the patient has an NPM1 mutation.
- the autoimmune disease is selected from hematological malignancies.
- methods for treating a heteroimmune disease or condition comprising administering to a patient in need the pharmaceutical composition provided herein.
- methods for treating a cancer comprising administering to a patient in need the pharmaceutical composition provided herein.
- the cancer has an ALK (anaplastic lymphoma kinase) mutation.
- the cancer is positive for an ALK fusion.
- the cancer is resistant to an ALK inhibitor.
- the cancer has an ALK mutation selected from the group consisting of T1151K, I1171N, I1171S, I1171T, F1174I, F1174L, F1174V, V1180L, L1196M, L1196Q, L1198F, L1198H, C1156Y, C1159Y, G1202R, D1203N, F1245V, L1256F, G1269A, and combinations thereof.
- the cancer is a hematological malignancy.
- the disease or condition is leukemia, lymphoma, or multiple myeloma.
- the disease or condition is acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), mast-cell leukemia (MCL), or myelodysplastic syndrome (MDS).
- ALL acute lymphocytic leukemia
- AML acute myeloid leukemia
- CLL chronic lymphocytic leukemia
- CML chronic myeloid leukemia
- PDL prolymphocytic leukemia
- LGL large granular lymphocytic
- HCL hairy cell leukemia
- MCL mast-cell leukemia
- MDS myelodysplastic syndrome
- the AML is relapsed or refractory. In certain embodiments, the AML is relapsed or refractory and is FLT3 mutation-positive. In certain embodiments, the FLT3 mutation is an FLT3-ITD mutation. In certain embodiments, the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. In certain embodiments, the FLT3 mutation is N676K. In certain embodiments, the FLT3 mutation is F691L. In certain embodiments, the FLT3 mutation is D835H. In certain embodiments, the FLT3 mutation is D835V.
- the FLT3 mutation is D835Y. In certain embodiments, the FLT3 mutation is Y842C. In certain embodiments, the patient has an NPM1 mutation.
- the AML is resistant to chemotherapy. In certain embodiments, the AML is resistant to chemotherapy and has developed a FLT3-IND mutation, including, but not limited to at least one mutation selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. [00324] In certain embodiments, the AML is resistant to a previously administered FLT3 inhibitor. In certain embodiments, the AML is resistant to gilteritinib.
- the AML is resistant to midostaurin.
- methods for treating mastocytosis comprising administering to a patient in need a pharmaceutical composition provided herein.
- methods for treating osteoporosis or bone resorption disorders comprising administering to a patient in need a pharmaceutical composition provided herein.
- methods for treating an inflammatory disease or condition comprising administering to a patient in need a pharmaceutical composition provided herein.
- kits for treating lupus comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- kits for treating a heteroimmune disease or condition comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- kits for treating diffuse large B cell lymphoma, follicular lymphoma or chronic lymphocytic leukemia comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- kits for treating mastocytosis comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- kits for treating osteoporosis or bone resorption disorders comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- provided herein are methods for treating an inflammatory disease or condition comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof.
- a pharmaceutical composition comprising a pharmaceutically acceptable carrier and a pharmaceutically effective amount of a compound according to any one of the formulas described herein.
- the compound is according to any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd).
- the pharmaceutical composition is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, or rectal administration.
- the carrier is a parenteral carrier.
- the carrier is an oral carrier.
- the carrier is a topical carrier.
- the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) inhibit FLT3.
- the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are used to treat patients suffering from FLT3-dependent or FLT3 mediated conditions or diseases, including, but not limited to, proliferative diseases such as hematological malignancies.
- the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are used to treat patients suffering from FLT-dependent or FLT3 mediated conditions or diseases, including, but not limited to, cancer, e.g. hematological malignancies.
- Compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be synthesized using standard synthetic reactions known to those of skill in the art or using methods known in the art. The reactions can be employed in a linear sequence to provide the compounds or they may be used to synthesize fragments which are subsequently joined by the methods known in the art. Exemplary methods are provided in the Examples herein. [00345] Described herein are compounds that inhibit the activity of FLT3, and processes for their preparation.
- compositions that include at least one such compound or a pharmaceutically acceptable salt, pharmaceutically acceptable solvate, pharmaceutically active metabolite or pharmaceutically acceptable prodrug of such compound, are provided.
- the starting material used for the synthesis of the compounds described herein may be synthesized or can be obtained from commercial sources, such as, but not limited to, Aldrich Chemical Co. (Milwaukee, Wisconsin), Bachem (Torrance, California), or Sigma Chemical Co. (St. Louis, Mo.).
- Intermediate I-3 is next reacted with amine NHR 2c R 2d to afford intermediate I-4, which is subjected to Buchwald-Hartwigh cross coupling conditions to afford intermediate I-6.
- the ester of intermediate I-6 is cleaved to afford intermediate I-7, which is reacted with intermediate I-8 to afford a compound of Formula (I).
- compounds of Formula (I) are prepared according to the following scheme [00353]
- a compound of Formula (I) may be prepared by starting with intermediate I-9, which is coupled to intermediate I-10 using appropriate coupling reagents and conditions to afford intermediate I-11.
- Stereoisomers may be obtained, if desired, by methods known in the art as, for example, the separation of stereoisomers by chiral chromatographic columns.
- Diastereomeric mixtures can be separated into their individual diastereomers on the basis of their physical chemical differences by methods known, for example, by chromatography and/or fractional crystallization.
- enantiomers can be separated by chiral chromatographic columns.
- enantiomers can be separated by converting the enantiomeric mixture into a diastereomeric mixture by reaction with an appropriate optically active compound (e.g., alcohol), separating the diastereomers and converting (e.g., hydrolyzing) the individual diastereomers to the corresponding pure enantiomers. All such isomers, including diastereomers, enantiomers, and mixtures thereof are considered as part of the compositions described herein. [00357] Methods and formulations described herein include the use of N-oxides, crystalline forms (also known as polymorphs), or pharmaceutically acceptable salts of compounds described herein, as well as active metabolites of these compounds having the same type of activity.
- an appropriate optically active compound e.g., alcohol
- compounds may exist as tautomers. All tautomers are included within the scope of the compounds presented herein.
- compounds described herein can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. Solvated forms of compounds presented herein are also considered to be disclosed herein.
- Compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in unoxidized form can be prepared from N-oxides of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) by treating with a reducing agent, such as, but not limited to, sulfur, sulfur dioxide, triphenyl phosphine, lithium borohydride, sodium borohydride, phosphorus trichloride, tribromide, or the like in a suitable inert organic solvent, such as, but not limited to, acetonitrile, ethanol, aqueous dioxane, or the like at 0 to 80
- prodrugs refers to an agent that is converted into the parent drug in vivo. Prodrugs are often useful because, in some situations, they may be easier to administer than the parent drug. They may, for instance, be bioavailable by oral administration whereas the parent is not. The prodrug may also have improved solubility in pharmaceutical compositions over the parent drug.
- prodrug a compound described herein, which is administered as an ester (the “prodrug”) to facilitate transmittal across a cell membrane where water solubility is detrimental to mobility but which then is metabolically hydrolyzed to the carboxylic acid, the active entity, once inside the cell where water-solubility is beneficial.
- prodrug a short peptide (polyaminoacid) bonded to an acid group where the peptide is metabolized to reveal the active moiety.
- a prodrug upon in vivo administration, a prodrug is chemically converted to the biologically, pharmaceutically, or therapeutically active form of the compound.
- a prodrug is enzymatically metabolized by one or more steps or processes to the biologically, pharmaceutically, or therapeutically active form of the compound.
- a pharmaceutically active compound is modified such that the active compound will be regenerated upon in vivo administration.
- the prodrug can be designed to alter the metabolic stability or the transport characteristics of a drug, to mask side effects or toxicity, to improve the flavor of a drug or to alter other characteristics or properties of a drug.
- Prodrug forms of the herein described compounds, wherein the prodrug is metabolized in vivo to produce a derivative as set forth herein are included within the scope of the claims. In some cases, some of the herein-described compounds may be a prodrug for another derivative or active compound.
- Prodrugs are often useful because, in some situations, they may be easier to administer than the parent drug. They may, for instance, be bioavailable by oral administration whereas the parent is not. The prodrug may also have improved solubility in pharmaceutical compositions over the parent drug. Prodrugs may be designed as reversible drug derivatives, for use as modifiers to enhance drug transport to site- specific tissues. In some embodiments, the design of a prodrug increases the effective water solubility. See, e.g., Fedorak et al., Am. J. Physiol., 269:G210-218 (1995); McLeod et al., Gastroenterol, 106:405- 413 (1994); Hochhaus et al., Biomed.
- Sites on the aromatic ring portion of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) can be susceptible to various metabolic reactions, therefore incorporation of appropriate substituents on the aromatic ring structures, such as, by way of example only, halogens can reduce, minimize or eliminate this metabolic pathway.
- Compounds described herein include isotopically-labeled compounds, which are identical to those recited in the various formulas and structures presented herein, but for the fact that one or more atoms are replaced by an atom having an atomic mass or mass number different from the atomic mass or mass number usually found in nature.
- isotopes that can be incorporated into the present compounds include isotopes of hydrogen, carbon, nitrogen, oxygen, fluorine and chlorine, such as 2 H, 3 H, 13 C, 14 C, 15 N, 18 O, 17 O, 35 S, 18 F, 36 Cl, respectively.
- isotopically-labeled compounds described herein for example those into which radioactive isotopes such as 3 H and 14 C are incorporated, are useful in drug and/or substrate tissue distribution assays. Further, substitution with isotopes such as deuterium, i.e., 2 H, can afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life or reduced dosage requirements.
- the compounds described herein are metabolized upon administration to an organism in need to produce a metabolite that is then used to produce a desired effect, including a desired therapeutic effect.
- Compounds described herein may be formed as, and/or used as, pharmaceutically acceptable salts.
- the type of pharmaceutical acceptable salts include, but are not limited to: (1) acid addition salts, formed by reacting the free base form of the compound with a pharmaceutically acceptable: inorganic acid such as hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, metaphosphoric acid, and the like; or with an organic acid such as acetic acid, propionic acid, hexanoic acid, cyclopentanepropionic acid, glycolic acid, pyruvic acid, lactic acid, malonic acid, succinic acid, malic acid, maleic acid, fumaric acid, trifluoroacetic acid, tartaric acid, citric acid, benzoic acid, 3-(4- hydroxybenzoyl)benzoic acid, cinnamic acid, mandelic acid, methanesulfonic acid, ethanesulfonic acid, 1,2-ethanedisulfonic acid, 2-hydroxyethanesulfonic acid, benzenesulfonic acid
- the corresponding counterions of the pharmaceutically acceptable salts may be analyzed and identified using various methods including, but not limited to, ion exchange chromatography, ion chromatography, capillary electrophoresis, inductively coupled plasma, atomic absorption spectroscopy, mass spectrometry, or any combination thereof.
- the salts are recovered by using at least one of the following techniques: filtration, precipitation with a non-solvent followed by filtration, evaporation of the solvent, or, in the case of aqueous solutions, lyophilization.
- a reference to a pharmaceutically acceptable salt includes the solvent addition forms or crystal forms thereof, particularly solvates or polymorphs.
- Solvates contain either stoichiometric or non-stoichiometric amounts of a solvent, and may be formed during the process of crystallization with pharmaceutically acceptable solvents such as water, ethanol, and the like. Hydrates are formed when the solvent is water, or alcoholates are formed when the solvent is alcohol.
- Solvates of compounds described herein can be conveniently prepared or formed during the processes described herein.
- the compounds provided herein can exist in unsolvated as well as solvated forms. In general, the solvated forms are considered equivalent to the unsolvated forms for the purposes of the compounds and methods provided herein.
- a reference to a salt includes the solvent addition forms or crystal forms thereof, particularly solvates or polymorphs.
- Solvates contain either stoichiometric or non- stoichiometric amounts of a solvent, and are often formed during the process of crystallization with pharmaceutically acceptable solvents such as water, ethanol, and the like. Hydrates are formed when the solvent is water, or alcoholates are formed when the solvent is alcohol.
- Polymorphs include the different crystal packing arrangements of the same elemental composition of a compound. Polymorphs usually have different X-ray diffraction patterns, infrared spectra, melting points, density, hardness, crystal shape, optical and electrical properties, stability, and solubility. Various factors such as the recrystallization solvent, rate of crystallization, and storage temperature may cause a single crystal form to dominate. [00370] Compounds described herein may be in various forms, including but not limited to, amorphous forms, milled forms and nano-particulate forms. In addition, compounds described herein include crystalline forms, also known as polymorphs. Polymorphs include the different crystal packing arrangements of the same elemental composition of a compound.
- Polymorphs usually have different X- ray diffraction patterns, infrared spectra, melting points, density, hardness, crystal shape, optical and electrical properties, stability, and solubility. Various factors such as the recrystallization solvent, rate of crystallization, and storage temperature may cause a single crystal form to dominate. [00371]
- the screening and characterization of the pharmaceutically acceptable salts, polymorphs, and/or solvates may be accomplished using a variety of techniques including, but not limited to, thermal analysis, x-ray diffraction, spectroscopy, vapor sorption, and microscopy.
- Thermal analysis methods address thermo chemical degradation or thermo physical processes including, but not limited to, polymorphic transitions, and such methods are used to analyze the relationships between polymorphic forms, determine weight loss, to find the glass transition temperature, or for excipient compatibility studies.
- Such methods include, but are not limited to, Differential scanning calorimetry (DSC), Modulated Differential Scanning Calorimetry (MDCS), Thermogravimetric analysis (TGA), and Thermogravi-metric and Infrared analysis (TG/IR).
- DSC Differential scanning calorimetry
- MDCS Modulated Differential Scanning Calorimetry
- TGA Thermogravimetric analysis
- TG/IR Thermogravi-metric and Infrared analysis
- X-ray diffraction methods include, but are not limited to, single crystal and powder diffractometers and synchrotron sources.
- the various spectroscopic techniques used include, but are not limited to, Raman, FTIR, UVIS, and NMR (liquid and solid state).
- the various microscopy techniques include, but are not limited to, polarized light microscopy, Scanning Electron Microscopy (SEM) with Energy Dispersive X-Ray Analysis (EDX), Environmental Scanning Electron Microscopy with EDX (in gas or water vapor atmosphere), IR microscopy, and Raman microscopy.
- SEM Scanning Electron Microscopy
- EDX Energy Dispersive X-Ray Analysis
- IR microscopy in gas or water vapor atmosphere
- Raman microscopy Raman microscopy
- compositions may be formulated in a conventional manner using one or more physiologically acceptable carriers including excipients and auxiliaries which facilitate processing of the active compounds into preparations which can be used pharmaceutically. Proper formulation is dependent upon the route of administration chosen. Any of the well-known techniques, carriers, and excipients may be used as suitable and as understood in the art. A summary of pharmaceutical compositions described herein may be found, for example, in Remington: The Science and Practice of Pharmacy, Nineteenth Ed (Easton, Pa.: Mack Publishing Company, 1995); Hoover, John E., Remington’s Pharmaceutical Sciences, Mack Publishing Co., Easton, Pennsylvania 1975; Liberman, H.A.
- a pharmaceutical composition refers to a mixture of a compound described herein, such as, for example, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) with other chemical components, such as carriers, stabilizers, diluents, dispersing agents, suspending agents, thickening agents, and/or excipients.
- the pharmaceutical composition facilitates administration of the compound to an organism.
- therapeutically effective amounts of compounds described herein are administered in a pharmaceutical composition to a mammal having a disease, disorder, or condition to be treated.
- the mammal is a human.
- a therapeutically effective amount can vary widely depending on the severity of the disease, the age and relative health of the subject, the potency of the compound used and other factors.
- the compounds can be used singly or in combination with one or more therapeutic agents as components of mixtures.
- compositions may also include one or more pH adjusting agents or buffering agents, including acids such as acetic, boric, citric, lactic, phosphoric and hydrochloric acids; bases such as sodium hydroxide, sodium phosphate, sodium borate, sodium citrate, sodium acetate, sodium lactate and tris-hydroxymethylaminomethane; and buffers such as citrate/dextrose, sodium bicarbonate and ammonium chloride. Such acids, bases and buffers are included in an amount required to maintain pH of the composition in an acceptable range.
- compositions may also include one or more salts in an amount required to bring osmolality of the composition into an acceptable range.
- Such salts include those having sodium, potassium or ammonium cations, and chloride, citrate, ascorbate, borate, phosphate, bicarbonate, sulfate, thiosulfate or bisulfite anions; suitable salts include sodium chloride, potassium chloride, sodium thiosulfate, sodium bisulfite and ammonium sulfate.
- pharmaceutical combination means a product that results from the mixing or combining of more than one active ingredient and includes both fixed and non-fixed combinations of the active ingredients.
- the term “fixed combination” means that the active ingredients, e.g.
- a compound described herein and a co-agent are both administered to a patient simultaneously in the form of a single entity or dosage.
- the term “non-fixed combination” means that the active ingredients, e.g. a compound described herein and a co-agent, are administered to a patient as separate entities either simultaneously, concurrently or sequentially with no specific intervening time limits, wherein such administration provides effective levels of the two compounds in the body of the patient.
- cocktail therapy e.g. the administration of three or more active ingredients.
- compositions described herein can be administered to a subject by multiple administration routes, including but not limited to, oral, parenteral (e.g., intravenous, subcutaneous, intramuscular), intranasal, buccal, topical, rectal, or transdermal administration routes.
- the pharmaceutical compositions described herein include, but are not limited to, aqueous liquid dispersions, self-emulsifying dispersions, solid solutions, liposomal dispersions, aerosols, solid dosage forms, powders, immediate release formulations, controlled release formulations, fast melt formulations, tablets, capsules, pills, delayed release formulations, extended release formulations, pulsatile release formulations, multiparticulate formulations, and mixed immediate and controlled release formulations.
- compositions including a compound described herein may be manufactured in a conventional manner, such as, by way of example only, by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or compression processes.
- the pharmaceutical compositions will include at least one compound described herein, such as, for example, a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) as an active ingredient in free-acid or free-base form, or in a pharmaceutically acceptable salt form.
- compositions described herein include the use of N-oxides, crystalline forms (also known as polymorphs), as well as active metabolites of these compounds having the same type of activity.
- compounds may exist as tautomers. All tautomers are included within the scope of the compounds presented herein.
- the compounds described herein can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. The solvated forms of the compounds presented herein are also considered to be disclosed herein.
- “Antifoaming agents” reduce foaming during processing which can result in coagulation of aqueous dispersions, bubbles in the finished film, or generally impair processing.
- anti-foaming agents include silicon emulsions or sorbitan sesquoleate.
- Antioxidants include, for example, butylated hydroxytoluene (BHT), sodium ascorbate, ascorbic acid, sodium metabisulfite, and tocopherol. In certain embodiments, antioxidants enhance chemical stability where required.
- compositions provided herein may also include one or more preservatives to inhibit microbial activity.
- Suitable preservatives include mercury-containing substances such as merfen and thiomersal; stabilized chlorine dioxide; and quaternary ammonium compounds such as benzalkonium chloride, cetyltrimethylammonium bromide and cetylpyridinium chloride.
- Formulations described herein may benefit from antioxidants, metal chelating agents, thiol containing compounds and other general stabilizing agents.
- stabilizing agents include, but are not limited to: (a) about 0.5% to about 2% w/v glycerol, (b) about 0.1% to about 1% w/v methionine, (c) about 0.1% to about 2% w/v monothioglycerol, (d) about 1 mM to about 10 mM EDTA, (e) about 0.01% to about 2% w/v ascorbic acid, (f) 0.003% to about 0.02% w/v polysorbate 80, (g) 0.001% to about 0.05% w/v.
- polysorbate 20 (h) arginine, (i) heparin, (j) dextran sulfate, (k) cyclodextrins, (l) pentosan polysulfate and other heparinoids, (m) divalent cations such as magnesium and zinc; or (n) combinations thereof.
- Binders impart cohesive qualities and include, e.g., alginic acid and salts thereof; cellulose derivatives such as carboxymethylcellulose, methylcellulose (e.g., Methocel ® ), hydroxypropylmethylcellulose, hydroxyethylcellulose, hydroxypropylcellulose (e.g., Klucel ® ), ethylcellulose (e.g., Ethocel ® ), and microcrystalline cellulose (e.g., Avicel ® ); microcrystalline dextrose; amylose; magnesium aluminum silicate; polysaccharide acids; bentonites; gelatin; polyvinylpyrrolidone/vinyl acetate copolymer; crosspovidone; povidone; starch; pregelatinized starch; tragacanth, dextrin, a sugar, such as sucrose (e.g., Dipac ® ), glucose, dextrose, molasses, mannitol, sorbi
- cellulose derivatives such
- a “carrier” or “carrier materials” include any commonly used excipients in pharmaceutics and should be selected on the basis of compatibility with compounds disclosed herein, such as, compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and the release profile properties of the desired dosage form.
- Exemplary carrier materials include, e.g., binders, suspending agents, disintegration agents, filling agents, surfactants, solubilizers, stabilizers, lubricants, wetting agents, diluents, and the like.
- “Pharmaceutically compatible carrier materials” may include, but are not limited to, acacia, gelatin, colloidal silicon dioxide, calcium glycerophosphate, calcium lactate, maltodextrin, glycerine, magnesium silicate, polyvinylpyrrollidone (PVP), cholesterol, cholesterol esters, sodium caseinate, soy lecithin, taurocholic acid, phosphotidylcholine, sodium chloride, tricalcium phosphate, dipotassium phosphate, cellulose and cellulose conjugates, sugars sodium stearoyl lactylate, carrageenan, monoglyceride, diglyceride, pregelatinized starch, and the like.
- PVP polyvinylpyrrollidone
- Disposing agents include materials that control the diffusion and homogeneity of a drug through liquid media or a granulation method or blend method.
- these agents also facilitate the effectiveness of a coating or eroding matrix.
- exemplary diffusion facilitators/dispersing agents include, e.g., hydrophilic polymers, electrolytes, Tween ® 60 or 80, PEG, polyvinylpyrrolidone (PVP; commercially known as Plasdone ® ), and the carbohydrate- based dispersing agents such as, for example, hydroxypropyl celluloses (e.g., HPC, HPC-SL, and HPC-L), hydroxypropyl methylcelluloses (e.g., HPMC K100, HPMC K4M, HPMC K15M, and HPMC K100M), carboxymethylcellulose sodium, methylcellulose, hydroxyethylcellulose, hydroxypropylcellulose, hydroxypropylmethylcellulose phthalate, hydroxypropylmethylcellulose acetate stearate (HPMCAS), noncrystalline cellulose, magnesium aluminum silicate, triethanolamine, polyvinyl alcohol (PVA), vinyl pyrroli
- Plasticizcers such as cellulose or triethyl cellulose can also be used as dispersing agents.
- Dispersing agents particularly useful in liposomal dispersions and self-emulsifying dispersions are dimyristoyl phosphatidyl choline, natural phosphatidyl choline from eggs, natural phosphatidyl glycerol from eggs, cholesterol and isopropyl myristate.
- Combinations of one or more erosion facilitator with one or more diffusion facilitator can also be used in the present compositions.
- the term “diluent” refers to chemical compounds that are used to dilute the compound of interest prior to delivery. Diluents can also be used to stabilize compounds because they can provide a more stable environment.
- Salts dissolved in buffered solutions are utilized as diluents in the art, including, but not limited to a phosphate buffered saline solution.
- diluents increase bulk of the composition to facilitate compression or create sufficient bulk for homogenous blend for capsule filling.
- Such compounds include e.g., lactose, starch, mannitol, sorbitol, dextrose, microcrystalline cellulose such as Avicel ® ; dibasic calcium phosphate, dicalcium phosphate dihydrate; tricalcium phosphate, calcium phosphate; anhydrous lactose, spray-dried lactose; pregelatinized starch, compressible sugar, such as Di-Pac ® (Amstar); mannitol, hydroxypropylmethylcellulose, hydroxypropylmethylcellulose acetate stearate, sucrose-based diluents, confectioner’s sugar; monobasic calcium sulfate monohydrate, calcium sulfate dihydrate; calcium lactate trihydrate, dextrates; hydrolyzed cereal solids, amylose; powdered cellulose, calcium carbonate; glycine, kaolin; mannitol, sodium chloride; inositol, bentonite, and the like.
- disintegrate includes both the dissolution and dispersion of the dosage form when contacted with gastrointestinal fluid.
- disintegration agents or disintegrants facilitate the breakup or disintegration of a substance.
- disintegration agents include a starch, e.g., a natural starch such as corn starch or potato starch, a pregelatinized starch such as National 1551 or Amijel ® , or sodium starch glycolate such as Promogel ® or Explotab ® , a cellulose such as a wood product, methylcrystalline cellulose, e.g., Avicel ® , Avicel ® PH101, Avicel ® PH102, Avicel ® PH105, Elcema ® P100, Emcocel ® , Vivacel ® , Ming Tia ® , and Solka-Floc ® , methylcellulose, croscarmellose, or a cross-linked cellulose, such as cross-linked sodium carboxy
- “Drug absorption” or “absorption” typically refers to the process of movement of drug from site of administration of a drug across a barrier into a blood vessel or the site of action, e.g., a drug moving from the gastrointestinal tract into the portal vein or lymphatic system.
- An “enteric coating” is a substance that remains substantially intact in the stomach but dissolves and releases the drug in the small intestine or colon.
- the enteric coating comprises a polymeric material that prevents release in the low pH environment of the stomach but that ionizes at a higher pH, typically a pH of 6 to 7, and thus dissolves sufficiently in the small intestine or colon to release the active agent therein.
- Erosion facilitators include materials that control the erosion of a particular material in gastrointestinal fluid. Erosion facilitators are generally known to those of ordinary skill in the art. Exemplary erosion facilitators include, e.g., hydrophilic polymers, electrolytes, proteins, peptides, and amino acids.
- Filling agents include compounds such as lactose, calcium carbonate, calcium phosphate, dibasic calcium phosphate, calcium sulfate, microcrystalline cellulose, cellulose powder, dextrose, dextrates, dextran, starches, pregelatinized starch, sucrose, xylitol, lactitol, mannitol, sorbitol, sodium chloride, polyethylene glycol, and the like.
- “Flavoring agents” and/or “sweeteners” useful in the formulations described herein include, e.g., acacia syrup, acesulfame K, alitame, anise, apple, aspartame, banana, Bavarian cream, berry, black currant, butterscotch, calcium citrate, camphor, caramel, cherry, cherry cream, chocolate, cinnamon, bubble gum, citrus, citrus punch, citrus cream, cotton candy, cocoa, cola, cool cherry, cool citrus, cyclamate, cylamate, dextrose, eucalyptus, eugenol, fructose, fruit punch, ginger, glycyrrhetinate, glycyrrhiza (licorice) syrup, grape, grapefruit, honey, isomalt, lemon, lime, lemon cream, monoammonium glyrrhizinate (MagnaSweet ® ), maltol, mannitol, maple,
- “Lubricants” and “glidants” are compounds that prevent, reduce or inhibit adhesion or friction of materials.
- Exemplary lubricants include, e.g., stearic acid, calcium hydroxide, talc, sodium stearyl fumerate, a hydrocarbon such as mineral oil, or hydrogenated vegetable oil such as hydrogenated soybean oil (Sterotex ® ), higher fatty acids and their alkali-metal and alkaline earth metal salts, such as aluminum, calcium, magnesium, zinc, stearic acid, sodium stearates, glycerol, talc, waxes, Stearowet ® , boric acid, sodium benzoate, sodium acetate, sodium chloride, leucine, a polyethylene glycol (e.g., PEG-4000) or a methoxypolyethylene glycol such as CarbowaxTM, sodium oleate, sodium benzoate, glyceryl behenate, polyethylene glycol, magnesium or sodium lau
- a “measurable serum concentration” or “measurable plasma concentration” describes the blood serum or blood plasma concentration, typically measured in mg, ⁇ g, or ng of therapeutic agent per ml, dl, or l of blood serum, absorbed into the bloodstream after administration. As used herein, measurable plasma concentrations are typically measured in ng/ml or ⁇ g/ml.
- “Pharmacodynamics” refers to the factors which determine the biologic response observed relative to the concentration of drug at a site of action.
- “Pharmacokinetics” refers to the factors which determine the attainment and maintenance of the appropriate concentration of drug at a site of action.
- Plasticizers are compounds used to soften the microencapsulation material or film coatings to make them less brittle.
- Suitable plasticizers include, e.g., polyethylene glycols such as PEG 300, PEG 400, PEG 600, PEG 1450, PEG 3350, and PEG 800, stearic acid, propylene glycol, oleic acid, triethyl cellulose and triacetin.
- plasticizers can also function as dispersing agents or wetting agents.
- Solubilizers include compounds such as triacetin, triethylcitrate, ethyl oleate, ethyl caprylate, sodium lauryl sulfate, sodium doccusate, vitamin E TPGS, dimethylacetamide, N-methylpyrrolidone, N- hydroxyethylpyrrolidone, polyvinylpyrrolidone, hydroxypropylmethyl cellulose, hydroxypropyl cyclodextrins, ethanol, n-butanol, isopropyl alcohol, cholesterol, bile salts, polyethylene glycol 200-600, glycofurol, transcutol, propylene glycol, and dimethyl isosorbide and the like.
- “Stabilizers” include compounds such as any antioxidation agents, buffers, acids, preservatives and the like.
- “Steady state,” as used herein, is when the amount of drug administered is equal to the amount of drug eliminated within one dosing interval resulting in a plateau or constant plasma drug exposure.
- “Suspending agents” include compounds such as polyvinylpyrrolidone, e.g., polyvinylpyrrolidone K12, polyvinylpyrrolidone K17, polyvinylpyrrolidone K25, or polyvinylpyrrolidone K30, vinyl pyrrolidone/vinyl acetate copolymer (S630), polyethylene glycol, e.g., the polyethylene glycol can have a molecular weight of about 300 to about 6000, or about 3350 to about 4000, or about 7000 to about 5400, sodium carboxymethylcellulose, methylcellulose, hydroxypropylmethylcellulose, hydroxymethylcellulose acetate stearate, polysorbate-80, hydroxyethylcellulose, sodium alginate, gums, such as, e.g., gum tragacanth and gum acacia, guar gum, xanthans, including xanthan gum, sugars, cellulosics, such as
- “Surfactants” include compounds such as sodium lauryl sulfate, sodium docusate, Tween 60 or 80, triacetin, vitamin E TPGS, sorbitan monooleate, polyoxyethylene sorbitan monooleate, polysorbates, polaxomers, bile salts, glyceryl monostearate, copolymers of ethylene oxide and propylene oxide, e.g., Pluronic ® (BASF), and the like.
- Pluronic ® BASF
- surfactants include polyoxyethylene fatty acid glycerides and vegetable oils, e.g., polyoxyethylene (60) hydrogenated castor oil; and polyoxyethylene alkylethers and alkylphenyl ethers, e.g., octoxynol 10, octoxynol 40. In some embodiments, surfactants may be included to enhance physical stability or for other purposes.
- “Viscosity enhancing agents” include, e.g., methyl cellulose, xanthan gum, carboxymethyl cellulose, hydroxypropyl cellulose, hydroxypropylmethyl cellulose, hydroxypropylmethyl cellulose acetate stearate, hydroxypropylmethyl cellulose phthalate, carbomer, polyvinyl alcohol, alginates, acacia, chitosans and combinations thereof.
- Weight agents include compounds such as oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, sodium docusate, sodium oleate, sodium lauryl sulfate, sodium doccusate, triacetin, Tween 80, vitamin E TPGS, ammonium salts and the like.
- compositions described herein can be formulated for administration to a subject via any conventional means including, but not limited to, oral, parenteral (e.g., intravenous, subcutaneous, or intramuscular), buccal, intranasal, rectal or transdermal administration routes.
- parenteral e.g., intravenous, subcutaneous, or intramuscular
- buccal e.g., intranasal
- rectal e.g., transdermal administration routes.
- transdermal administration routes e.g., transdermal administration routes.
- subject is used to mean an animal, preferably a mammal, including a human or non-human.
- patient and subject may be used interchangeably.
- compositions described herein which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) can be formulated into any suitable dosage form, including but not limited to, aqueous oral dispersions, liquids, gels, syrups, elixirs, slurries, suspensions and the like, for oral ingestion by a patient to be treated, solid oral dosage forms, aerosols, controlled release formulations, fast melt formulations, effervescent formulations, lyophilized formulations, tablets, powders, pills, dragees, capsules, delayed release formulations, extended release formulations, pulsatile release formulations, multiparticulate formulations, and mixed immediate release and controlled release formulations.
- aqueous oral dispersions liquids, gels, syrups, elixirs, slurries,
- compositions for oral use can be obtained by mixing one or more solid excipient with one or more of the compounds described herein, optionally grinding the resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee cores.
- Suitable excipients include, for example, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as, for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methylcellulose, microcrystalline cellulose, hydroxypropylmethylcellulose, sodium carboxymethylcellulose; or others such as: polyvinylpyrrolidone (PVP or povidone) or calcium phosphate.
- disintegrating agents may be added, such as the cross-linked croscarmellose sodium, polyvinylpyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate.
- Dragee cores are provided with suitable coatings.
- suitable coatings For this purpose, concentrated sugar solutions may be used, which may optionally contain gum arabic, talc, polyvinylpyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures.
- Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses.
- Pharmaceutical preparations which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol.
- the push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers.
- filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers.
- the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols.
- stabilizers may be added. All formulations for oral administration should be in dosages suitable for such administration.
- the solid dosage forms disclosed herein may be in the form of a tablet, (including a suspension tablet, a fast-melt tablet, a bite-disintegration tablet, a rapid-disintegration tablet, an effervescent tablet, or a caplet), a pill, a powder (including a sterile packaged powder, a dispensable powder, or an effervescent powder) a capsule (including both soft or hard capsules, e.g., capsules made from animal-derived gelatin or plant-derived HPMC, or “sprinkle capsules”), solid dispersion, solid solution, bioerodible dosage form, controlled release formulations, pulsatile release dosage forms, multiparticulate dosage forms, pellets, granules, or an aerosol.
- a tablet including a suspension tablet, a fast-melt tablet, a bite-disintegration tablet, a rapid-disintegration tablet, an effervescent tablet, or a caplet
- a pill including a sterile
- the pharmaceutical composition is in the form of a powder. In some embodiments, the pharmaceutical composition is in the form of a tablet, including but not limited to, a fast-melt tablet. Additionally, pharmaceutical compositions described herein may be administered as a single capsule or in multiple capsule dosage form. In some embodiments, the pharmaceutical composition is administered in two, or three, or four, capsules or tablets.
- solid dosage forms e.g., tablets, effervescent tablets, and capsules
- solid dosage forms are prepared by mixing particles of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) with one or more pharmaceutical excipients to form a bulk blend composition.
- compositions When referring to these bulk blend compositions as homogeneous, it is meant that the particles of the compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5- Vd) are dispersed evenly throughout the composition so that the composition may be readily subdivided into equally effective unit dosage forms, such as tablets, pills, and capsules.
- the individual unit dosages may also include film coatings, which disintegrate upon oral ingestion or upon contact with diluent.
- These formulations can be manufactured by conventional pharmacological techniques.
- Conventional pharmacological techniques include, e.g., one or a combination of methods: (1) dry mixing, (2) direct compression, (3) milling, (4) dry or non-aqueous granulation, (5) wet granulation, or (6) fusion. See, e.g., Lachman et al., The Theory and Practice of Industrial Pharmacy (1986).
- Other methods include, e.g., spray drying, pan coating, melt granulation, granulation, fluidized bed spray drying or coating (e.g., wurster coating), tangential coating, top spraying, tableting, extruding and the like.
- the pharmaceutical solid dosage forms described herein can include a compound described herein and one or more pharmaceutically acceptable additives such as a compatible carrier, binder, filling agent, suspending agent, flavoring agent, sweetening agent, disintegrating agent, dispersing agent, surfactant, lubricant, colorant, diluent, solubilizer, moistening agent, plasticizer, stabilizer, penetration enhancer, wetting agent, anti-foaming agent, antioxidant, preservative, or one or more combination thereof.
- a compatible carrier such as a compatible carrier, binder, filling agent, suspending agent, flavoring agent, sweetening agent, disintegrating agent, dispersing agent, surfactant, lubricant, colorant, diluent, solubilizer, moistening agent, plasticizer, stabilizer, penetration enhancer, wetting agent, anti-foaming agent, antioxidant, preservative, or one or more combination thereof.
- a film coating is provided around the formulation of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd).
- some or all of the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are coated.
- some or all of the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are microencapsulated.
- the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are not microencapsulated and are uncoated.
- Suitable carriers for use in the solid dosage forms described herein include, but are not limited to, acacia, gelatin, colloidal silicon dioxide, calcium glycerophosphate, calcium lactate, maltodextrin, glycerine, magnesium silicate, sodium caseinate, soy lecithin, sodium chloride, tricalcium phosphate, dipotassium phosphate, sodium stearoyl lactylate, carrageenan, monoglyceride, diglyceride, pregelatinized starch, hydroxypropylmethylcellulose, hydroxypropylmethylcellulose acetate stearate, sucrose, microcrystalline cellulose, lactose, mannitol and the like.
- Suitable filling agents for use in the solid dosage forms described herein include, but are not limited to, lactose, calcium carbonate, calcium phosphate, dibasic calcium phosphate, calcium sulfate, microcrystalline cellulose, cellulose powder, dextrose, dextrates, dextran, starches, pregelatinized starch, hydroxypropylmethycellulose (HPMC), hydroxypropylmethycellulose phthalate, hydroxypropylmethylcellulose acetate stearate (HPMCAS), sucrose, xylitol, lactitol, mannitol, sorbitol, sodium chloride, polyethylene glycol, and the like.
- Suitable disintegrants for use in the solid dosage forms described herein include, but are not limited to, natural starch such as corn starch or potato starch, a pregelatinized starch such as National 1551 or Amijel ® , or sodium starch glycolate such as Promogel ® or Explotab ® , a cellulose such as a wood product, methylcrystalline cellulose, e.g., Avicel ® , Avicel ® PH101, Avicel ® PH102, Avicel ® PH105, Elcema ® P100, Emcocel ® , Vivacel ® , Ming Tia ® , and Solka-Floc ® , methylcellulose, croscarmellose, or a cross- linked cellulose, such as cross-linked sodium carboxymethylcellulose (Ac-Di-Sol ® ), cross-linked carboxymethylcellulose, or cross-linked croscarmellose, a cross-linked starch such as sodium starch glycolate, a cross-linked
- Binders impart cohesiveness to solid oral dosage form formulations: for powder filled capsule formulation, they aid in plug formation that can be filled into soft or hard shell capsules and for tablet formulation, they ensure the tablet remaining intact after compression and help assure blend uniformity prior to a compression or fill step.
- Materials suitable for use as binders in the solid dosage forms described herein include, but are not limited to, carboxymethylcellulose, methylcellulose (e.g., Methocel ® ), hydroxypropylmethylcellulose (e.g.
- binder levels of 20-70% are used in powder-filled gelatin capsule formulations. Binder usage level in tablet formulations varies whether direct compression, wet granulation, roller compaction, or usage of other excipients such as fillers which itself can act as moderate binder. Formulators skilled in art can determine the binder level for the formulations, but binder usage level of up to 70% in tablet formulations is common.
- Suitable lubricants or glidants for use in the solid dosage forms described herein include, but are not limited to, stearic acid, calcium hydroxide, talc, corn starch, sodium stearyl fumerate, alkali-metal and alkaline earth metal salts, such as aluminum, calcium, magnesium, zinc, stearic acid, sodium stearates, magnesium stearate, zinc stearate, waxes, Stearowet ® , boric acid, sodium benzoate, sodium acetate, sodium chloride, leucine, a polyethylene glycol or a methoxypolyethylene glycol such as CarbowaxTM, PEG 4000, PEG 5000, PEG 6000, propylene glycol, sodium oleate, glyceryl behenate, glyceryl palmitostearate, glyceryl benzoate, magnesium or sodium lauryl sulfate, and the like.
- stearic acid calcium hydroxide, talc
- Suitable diluents for use in the solid dosage forms described herein include, but are not limited to, sugars (including lactose, sucrose, and dextrose), polysaccharides (including dextrates and maltodextrin), polyols (including mannitol, xylitol, and sorbitol), cyclodextrins and the like.
- non water-soluble diluent represents compounds typically used in the formulation of pharmaceuticals, such as calcium phosphate, calcium sulfate, starches, modified starches and microcrystalline cellulose, and microcellulose (e.g., having a density of about 0.45 g/cm 3 , e.g.
- Suitable wetting agents for use in the solid dosage forms described herein include, for example, oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, quaternary ammonium compounds (e.g., Polyquat 10 ® ), sodium oleate, sodium lauryl sulfate, magnesium stearate, sodium docusate, triacetin, vitamin E TPGS and the like.
- Suitable surfactants for use in the solid dosage forms described herein include, for example, sodium lauryl sulfate, sorbitan monooleate, polyoxyethylene sorbitan monooleate, polysorbates, polaxomers, bile salts, glyceryl monostearate, copolymers of ethylene oxide and propylene oxide, e.g., Pluronic ® (BASF), and the like.
- Suitable suspending agents for use in the solid dosage forms described here include, but are not limited to, polyvinylpyrrolidone, e.g., polyvinylpyrrolidone K12, polyvinylpyrrolidone K17, polyvinylpyrrolidone K25, or polyvinylpyrrolidone K30, polyethylene glycol, e.g., the polyethylene glycol can have a molecular weight of about 300 to about 6000, or about 3350 to about 4000, or about 7000 to about 5400, vinyl pyrrolidone/vinyl acetate copolymer (S630), sodium carboxymethylcellulose, methylcellulose, hydroxy-propylmethylcellulose, polysorbate-80, hydroxyethylcellulose, sodium alginate, gums, such as, e.g., gum tragacanth and gum acacia, guar gum, xanthans, including xanthan gum, sugars, cellulosics,
- Suitable antioxidants for use in the solid dosage forms described herein include, for example, e.g., butylated hydroxytoluene (BHT), sodium ascorbate, and tocopherol.
- BHT butylated hydroxytoluene
- sodium ascorbate sodium ascorbate
- tocopherol sodium ascorbate
- additives used in the solid dosage forms described herein should be taken as merely exemplary, and not limiting, of the types of additives that can be included in solid dosage forms described herein. The amounts of such additives can be readily determined by one skilled in the art, according to the particular properties desired.
- one or more layers of the pharmaceutical composition are plasticized.
- a plasticizer is generally a high boiling point solid or liquid.
- Plasticizers can be added from about 0.01% to about 50% by weight (w/w) of the coating composition.
- Plasticizers include, but are not limited to, diethyl phthalate, citrate esters, polyethylene glycol, glycerol, acetylated glycerides, triacetin, polypropylene glycol, polyethylene glycol, triethyl citrate, dibutyl sebacate, stearic acid, stearol, stearate, and castor oil.
- Compressed tablets are solid dosage forms prepared by compacting the bulk blend of the formulations described above. In various embodiments, compressed tablets which are designed to dissolve in the mouth will include one or more flavoring agents.
- the compressed tablets will include a film surrounding the final compressed tablet.
- the film coating can provide a delayed release of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd)from the formulation.
- the film coating aids in patient compliance (e.g., Opadry ® coatings or sugar coating). Film coatings including Opadry ® typically range from about 1% to about 3% of the tablet weight.
- the compressed tablets include one or more excipients.
- a capsule may be prepared, for example, by placing the bulk blend of the formulation of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) described above, inside of a capsule.
- the formulations non-aqueous suspensions and solutions
- the formulations are placed in a soft gelatin capsule.
- the formulations are placed in standard gelatin capsules or non-gelatin capsules such as capsules comprising HPMC.
- the formulation is placed in a sprinkle capsule, wherein the capsule may be swallowed whole or the capsule may be opened and the contents sprinkled on food prior to eating.
- the therapeutic dose is split into multiple (e.g., two, three, or four) capsules.
- the entire dose of the formulation is delivered in a capsule form.
- the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) and one or more excipients are dry blended and compressed into a mass, such as a tablet, having a hardness sufficient to provide a pharmaceutical composition that substantially disintegrates within less than about 30 minutes, less than about 35 minutes, less than about 40 minutes, less than about 45 minutes, less than about 50 minutes, less than about 55 minutes, or less than about 60 minutes, after oral administration, thereby releasing the formulation into the gastrointestinal fluid.
- dosage forms may include microencapsulated formulations.
- one or more other compatible materials are present in the microencapsulation material.
- Exemplary materials include, but are not limited to, pH modifiers, erosion facilitators, anti-foaming agents, antioxidants, flavoring agents, and carrier materials such as binders, suspending agents, disintegration agents, filling agents, surfactants, solubilizers, stabilizers, lubricants, wetting agents, and diluents.
- Materials useful for the microencapsulation described herein include materials compatible with compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) which sufficiently isolate the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) from other non-compatible excipients.
- Materials compatible with compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are those that delay the release of the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) in vivo.
- Exemplary microencapsulation materials useful for delaying the release of the formulations including compounds described herein include, but are not limited to, hydroxypropyl cellulose ethers (HPC) such as Klucel ® or Nisso HPC, low-substituted hydroxypropyl cellulose ethers (L-HPC), hydroxypropyl methyl cellulose ethers (HPMC) such as Seppifilm-LC, Pharmacoat ® , Metolose SR, Methocel ® -E, Opadry YS, PrimaFlo, Benecel MP824, and Benecel MP843, methylcellulose polymers such as Methocel ® -A, hydroxypropylmethylcellulose acetate stearate Aqoat (HF-LS, HF-LG,HF-MS) and Metolose ® , Ethylcelluloses (EC) and mixtures thereof such as E461, Ethocel ® , Aqualon ® -EC, Surelease ® ,
- HPC
- plasticizers such as polyethylene glycols, e.g., PEG 300, PEG 400, PEG 600, PEG 1450, PEG 3350, and PEG 800, stearic acid, propylene glycol, oleic acid, and triacetin are incorporated into the microencapsulation material.
- the microencapsulating material useful for delaying the release of the pharmaceutical compositions is from the USP or the National Formulary (NF).
- the microencapsulation material is Klucel.
- the microencapsulation material is methocel.
- Microencapsulated compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be formulated by methods known by one of ordinary skill in the art. Such known methods include, e.g., spray drying processes, spinning disk-solvent processes, hot melt processes, spray chilling methods, fluidized bed, electrostatic deposition, centrifugal extrusion, rotational suspension separation, polymerization at liquid-gas or solid- gas interface, pressure extrusion, or spraying solvent extraction bath.
- the particles of compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are microencapsulated prior to being formulated into one of the above forms.
- some or most of the particles are coated prior to being further formulated by using standard coating procedures, such as those described in Remington’s Pharmaceutical Sciences, 20th Edition (2000).
- the solid dosage formulations of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are plasticized (coated) with one or more layers.
- a plasticizer is generally a high boiling point solid or liquid. Suitable plasticizers can be added from about 0.01% to about 50% by weight (w/w) of the coating composition.
- Plasticizers include, but are not limited to, diethyl phthalate, citrate esters, polyethylene glycol, glycerol, acetylated glycerides, triacetin, polypropylene glycol, polyethylene glycol, triethyl citrate, dibutyl sebacate, stearic acid, stearol, stearate, and castor oil.
- a powder including the formulations with a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein may be formulated to include one or more pharmaceutical excipients and flavors.
- Such a powder may be prepared, for example, by mixing the formulation and optional pharmaceutical excipients to form a bulk blend composition. Additional embodiments also include a suspending agent and/or a wetting agent. This bulk blend is uniformly subdivided into unit dosage packaging or multi-dosage packaging units.
- effervescent powders are also prepared in accordance with the present disclosure.
- Effervescent salts have been used to disperse medicines in water for oral administration.
- Effervescent salts are granules or coarse powders containing a medicinal agent in a dry mixture, usually composed of sodium bicarbonate, citric acid, and/or tartaric acid.
- a medicinal agent in a dry mixture, usually composed of sodium bicarbonate, citric acid, and/or tartaric acid.
- salts of the compositions described herein are added to water, the acids and the base react to liberate carbon dioxide gas, thereby causing “effervescence.”
- effervescent salts include, e.g., the following ingredients: sodium bicarbonate or a mixture of sodium bicarbonate and sodium carbonate, citric acid and/or tartaric acid.
- the formulations described herein which include a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are solid dispersions. Methods of producing such solid dispersions are known in the art and include, but are not limited to, for example, U.S. Pat. Nos.
- the formulations described herein are solid solutions.
- Solid solutions incorporate a substance together with the active agent and other excipients such that heating the mixture results in dissolution of the drug and the resulting composition is then cooled to provide a solid blend which can be further formulated or directly added to a capsule or compressed into a tablet.
- Methods of producing such solid solutions are known in the art and include, but are not limited to, for example, U.S. Pat. Nos. 4,151,273, 5,281,420, and 6,083,518, each of which is specifically incorporated by reference.
- the pharmaceutical solid oral dosage forms including formulations described herein, which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd), can be further formulated to provide a controlled release of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd).
- Controlled release refers to the release of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) from a dosage form in which it is incorporated according to a desired profile over an extended period of time.
- Controlled release profiles include, for example, sustained release, prolonged release, pulsatile release, and delayed release profiles.
- controlled release compositions allow delivery of an agent to a subject over an extended period of time according to a predetermined profile.
- the solid dosage forms described herein can be formulated as enteric coated delayed release oral dosage forms, i.e., as an oral dosage form of a pharmaceutical composition as described herein which utilizes an enteric coating to affect release in the small intestine of the gastrointestinal tract.
- the enteric coated dosage form may be a compressed or molded or extruded tablet/mold (coated or uncoated) containing granules, powder, pellets, beads or particles of the active ingredient and/or other composition components, which are themselves coated or uncoated.
- the enteric coated oral dosage form may also be a capsule (coated or uncoated) containing pellets, beads or granules of the solid carrier or the composition, which are themselves coated or uncoated.
- delayed release refers to the delivery so that the release can be accomplished at some generally predictable location in the intestinal tract more distal to that which would have been accomplished if there had been no delayed release alterations. In some embodiments the method for delay of release is coating.
- any coatings should be applied to a sufficient thickness such that the entire coating does not dissolve in the gastrointestinal fluids at pH below about 5, but does dissolve at pH about 5 and above. It is expected that any anionic polymer exhibiting a pH-dependent solubility profile can be used as an enteric coating in the methods and compositions described herein to achieve delivery to the lower gastrointestinal tract.
- the polymers described herein are anionic carboxylic polymers.
- the polymers and compatible mixtures thereof, and some of their properties include, but are not limited to: [00447] Shellac, also called purified lac, a refined product obtained from the resinous secretion of an insect. This coating dissolves in media of pH >7; [00448] Acrylic polymers.
- acrylic polymers primarily their solubility in biological fluids
- suitable acrylic polymers include methacrylic acid copolymers and ammonium methacrylate copolymers.
- the Eudragit series E, L, S, RL, RS, and NE are available as solubilized in organic solvent, aqueous dispersion, or dry powders.
- the Eudragit series RL, NE, and RS are insoluble in the gastrointestinal tract but are permeable and are used primarily for colonic targeting.
- the Eudragit series E dissolve in the stomach.
- the Eudragit series L, L-30D and S are insoluble in stomach and dissolve in the intestine; [00449] Cellulose Derivatives.
- suitable cellulose derivatives are: ethyl cellulose; reaction mixtures of partial acetate esters of cellulose with phthalic anhydride. The performance can vary based on the degree and type of substitution.
- Cellulose acetate phthalate (CAP) dissolves in pH >6.
- Aquateric (FMC) is an aqueous based system and is a spray dried CAP psuedolatex with particles ⁇ 1 ⁇ m.
- Other components in Aquateric can include pluronics, Tweens, and acetylated monoglycerides.
- Suitable cellulose derivatives include: cellulose acetate trimellitate (Eastman); methylcellulose (Pharmacoat, Methocel); hydroxypropylmethyl cellulose phthalate (HPMCP); hydroxypropylmethyl cellulose succinate (HPMCS); and hydroxypropylmethylcellulose acetate succinate (e.g., AQOAT (Shin Etsu)).
- HPMCP such as, HP-50, HP-55, HP-55S, HP-55F grades are suitable.
- the performance can vary based on the degree and type of substitution.
- suitable grades of hydroxypropylmethylcellulose acetate succinate include, but are not limited to, AS-LG (LF), which dissolves at pH 5, AS-MG (MF), which dissolves at pH 5.5, and AS-HG (HF), which dissolves at higher pH. These polymers are offered as granules, or as fine powders for aqueous dispersions; [00450] Poly Vinyl Acetate Phthalate (PVAP). PVAP dissolves in pH >5, and it is much less permeable to water vapor and gastric fluids. [00451] In some embodiments, the coating can, and usually does, contain a plasticizer and possibly other coating excipients such as colorants, talc, and/or magnesium stearate, which are well known in the art.
- a plasticizer such as colorants, talc, and/or magnesium stearate, which are well known in the art.
- Suitable plasticizers include triethyl citrate (Citroflex 2), triacetin (glyceryl triacetate), acetyl triethyl citrate (Citroflec A2), Carbowax 400 (polyethylene glycol 400), diethyl phthalate, tributyl citrate, acetylated monoglycerides, glycerol, fatty acid esters, propylene glycol, and dibutyl phthalate.
- anionic carboxylic acrylic polymers usually will contain 10-25% by weight of a plasticizer, especially dibutyl phthalate, polyethylene glycol, triethyl citrate, and triacetin.
- coating techniques such as spray or pan coating are employed to apply coatings.
- the coating thickness must be sufficient to ensure that the oral dosage form remains intact until the desired site of topical delivery in the intestinal tract is reached.
- Colorants, detackifiers, surfactants, antifoaming agents, lubricants may be added to the coatings besides plasticizers to solubilize or disperse the coating material, and to improve coating performance and the coated product.
- the formulations described herein which include a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are delivered using a pulsatile dosage form.
- a pulsatile dosage form is capable of providing one or more immediate release pulses at predetermined time points after a controlled lag time or at specific sites.
- Pulsatile dosage forms including the formulations described herein, which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be administered using a variety of pulsatile formulations known in the art.
- such formulations include, but are not limited to, those described in U.S. Pat. Nos. 5,011,692, 5,017,381, 5,229,135, and 5,840,329, each of which is specifically incorporated by reference.
- Other pulsatile release dosage forms suitable for use with the present formulations include, but are not limited to, for example, U.S.
- the controlled release dosage form is pulsatile release solid oral dosage form including at least two groups of particles, (i.e. multiparticulate) each containing the formulation described herein.
- the first group of particles provides a substantially immediate dose of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) upon ingestion by a mammal.
- the first group of particles can be either uncoated or include a coating and/or sealant.
- the second group of particles includes coated particles, which includes from about 2% to about 75%, from about 2.5% to about 70%, or from about 40% to about 70%, by weight of the total dose of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in said formulation, in admixture with one or more binders.
- the coating includes a pharmaceutically acceptable ingredient in an amount sufficient to provide a delay of from about 2 hours to about 7 hours following ingestion before release of the second dose.
- Suitable coatings include one or more differentially degradable coatings such as, by way of example only, pH sensitive coatings (enteric coatings) such as acrylic resins (e.g., Eudragit ® EPO, Eudragit ® L30D-55, Eudragit ® FS 30D Eudragit ® L100-55, Eudragit ® L100, Eudragit ® S100, Eudragit ® RD100, Eudragit ® E100, Eudragit ® L12.5, Eudragit ® S12.5, and Eudragit ® NE30D, Eudragit ® NE 40D ® ) either alone or blended with cellulose derivatives, e.g., ethylcellulose, or non-enteric coatings having variable thickness to provide differential release of the formulation that includes a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I'
- compositions include particles of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein and at least one dispersing agent or suspending agent for oral administration to a subject.
- the formulations may be a powder and/or granules for suspension, and upon admixture with water, a substantially uniform suspension is obtained.
- Liquid formulation dosage forms for oral administration can be aqueous suspensions selected from the group including, but not limited to, pharmaceutically acceptable aqueous oral dispersions, emulsions, solutions, elixirs, gels, and syrups. See, e.g., Singh et al., Encyclopedia of Pharmaceutical Technology, 2 nd Ed., pp.754-757 (2002).
- the liquid dosage forms may include additives, such as: (a) disintegrating agents; (b) dispersing agents; (c) wetting agents; (d) at least one preservative, (e) viscosity enhancing agents, (f) at least one sweetening agent, and (g) at least one flavoring agent.
- the aqueous dispersions can further include a crystalline inhibitor.
- the aqueous suspensions and dispersions described herein can remain in a homogenous state, as defined in The USP Pharmacists’ Pharmacopeia (2005 edition, chapter 905), for at least 4 hours.
- the homogeneity should be determined by a sampling method consistent with regard to determining homogeneity of the entire composition.
- an aqueous suspension can be re- suspended into a homogenous suspension by physical agitation lasting less than 1 minute.
- an aqueous suspension can be re-suspended into a homogenous suspension by physical agitation lasting less than 45 seconds.
- an aqueous suspension can be re- suspended into a homogenous suspension by physical agitation lasting less than 30 seconds. In still some embodiments, no agitation is necessary to maintain a homogeneous aqueous dispersion.
- the dispersing agents suitable for the aqueous suspensions and dispersions described herein are known in the art and include, for example, hydrophilic polymers, electrolytes, Tween ® 60 or 80, PEG, polyvinylpyrrolidone (PVP; commercially known as Plasdone ® ), and the carbohydrate- based dispersing agents such as, for example, hydroxypropylcellulose and hydroxypropyl cellulose ethers (e.g., HPC, HPC-SL, and HPC-L), hydroxypropyl methylcellulose and hydroxypropyl methylcellulose ethers (e.g.
- HPMC K100, HPMC K4M, HPMC K15M, and HPMC K100M carboxymethylcellulose sodium, methylcellulose, hydroxyethylcellulose, hydroxypropylmethyl-cellulose phthalate, hydroxypropylmethyl-cellulose acetate stearate, noncrystalline cellulose, magnesium aluminum silicate, triethanolamine, polyvinyl alcohol (PVA), polyvinylpyrrolidone/vinyl acetate copolymer (Plasdone ® , e.g., S-630), 4-(1,1,3,3-tetramethylbutyl)-phenol polymer with ethylene oxide and formaldehyde (also known as tyloxapol), poloxamers (e.g., Pluronics F68 ® , F88 ® , and F108 ® , which are block copolymers of ethylene oxide and propylene oxide); and poloxamines (e.g., Tetronic 908 ® , also known as Poloxamine 908 ® ,
- the dispersing agent is selected from a group not comprising one of the following agents: hydrophilic polymers; electrolytes; Tween ® 60 or 80; PEG; polyvinylpyrrolidone (PVP); hydroxypropylcellulose and hydroxypropyl cellulose ethers (e.g., HPC, HPC-SL, and HPC-L); hydroxypropyl methylcellulose and hydroxypropyl methylcellulose ethers (e.g.
- HPMC K100, HPMC K4M, HPMC K15M, HPMC K100M, and Pharmacoat ® USP 2910 (Shin-Etsu)); carboxymethylcellulose sodium; methylcellulose; hydroxyethylcellulose; hydroxypropylmethyl-cellulose phthalate; hydroxypropylmethyl-cellulose acetate stearate; non-crystalline cellulose; magnesium aluminum silicate; triethanolamine; polyvinyl alcohol (PVA); 4-(1,1,3,3-tetramethylbutyl)-phenol polymer with ethylene oxide and formaldehyde; poloxamers (e.g., Pluronics F68 ® , F88 ® , and F108 ® , which are block copolymers of ethylene oxide and propylene oxide); or poloxamines (e.g., Tetronic 908 ® , also known as Poloxamine 908 ® ).
- Pluronics F68 ® , F88 ® , and F108 ® which are block copolymers
- wetting agents suitable for the aqueous suspensions and dispersions described herein include, but are not limited to, cetyl alcohol, glycerol monostearate, polyoxyethylene sorbitan fatty acid esters (e.g., the commercially available Tweens ® such as e.g., Tween 20 ® and Tween 80 ® (ICI Specialty Chemicals)), and polyethylene glycols (e.g., Carbowaxs 3350 ® and 1450 ® , and Carbopol 934 ® (Union Carbide)), oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, sodium oleate, sodium lauryl sulfate, sodium docusate, triacetin, vitamin E TPGS, sodium tau
- Preservatives are incorporated into the dosage form at a concentration sufficient to inhibit microbial growth.
- Suitable viscosity enhancing agents for the aqueous suspensions or dispersions described herein include, but are not limited to, methyl cellulose, xanthan gum, carboxymethyl cellulose, hydroxypropyl cellulose, hydroxypropylmethyl cellulose, Plasdon ® S-630, carbomer, polyvinyl alcohol, alginates, acacia, chitosans and combinations thereof.
- concentration of the viscosity enhancing agent will depend upon the agent selected and the viscosity desired.
- sweetening agents suitable for the aqueous suspensions or dispersions described herein include, for example, acacia syrup, acesulfame K, alitame, anise, apple, aspartame, banana, Bavarian cream, berry, black currant, butterscotch, calcium citrate, camphor, caramel, cherry, cherry cream, chocolate, cinnamon, bubble gum, citrus, citrus punch, citrus cream, cotton candy, cocoa, cola, cool cherry, cool citrus, cyclamate, cylamate, dextrose, eucalyptus, eugenol, fructose, fruit punch, ginger, glycyrrhetinate, glycyrrhiza (licorice) syrup, grape, grapefruit, honey, isomalt, lemon, lime, lemon cream, monoammonium glyrrhizinate (MagnaSweet ® ), maltol, mannitol, maple, marshmallow, menthol
- the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.001% to about 1.0% the volume of the aqueous dispersion. In some embodiments, the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.005% to about 0.5% the volume of the aqueous dispersion. In yet some embodiments, the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.01% to about 1.0% the volume of the aqueous dispersion.
- the liquid formulations can also include inert diluents commonly used in the art, such as water or other solvents, solubilizing agents, and emulsifiers.
- emulsifiers are ethyl alcohol, isopropyl alcohol, ethyl carbonate, ethyl acetate, benzyl alcohol, benzyl benzoate, propyleneglycol, 1,3-butyleneglycol, dimethylformamide, sodium lauryl sulfate, sodium doccusate, cholesterol, cholesterol esters, taurocholic acid, phosphotidylcholine, oils, such as cottonseed oil, groundnut oil, corn germ oil, olive oil, castor oil, and sesame oil, glycerol, tetrahydrofurfuryl alcohol, polyethylene glycols, fatty acid esters of sorbitan, or mixtures of these substances, and the like.
- the pharmaceutical compositions described herein can be self-emulsifying drug delivery systems (SEDDS).
- SEDDS self-emulsifying drug delivery systems
- Emulsions are dispersions of one immiscible phase in another, usually in the form of droplets.
- emulsions are created by vigorous mechanical dispersion.
- SEDDS as opposed to emulsions or microemulsions, spontaneously form emulsions when added to an excess of water without any external mechanical dispersion or agitation.
- An advantage of SEDDS is that only gentle mixing is required to distribute the droplets throughout the solution. Additionally, water or the aqueous phase can be added just prior to administration, which ensures stability of an unstable or hydrophobic active ingredient.
- the SEDDS provides an effective delivery system for oral and parenteral delivery of hydrophobic active ingredients.
- SEDDS may provide improvements in the bioavailability of hydrophobic active ingredients.
- Methods of producing self-emulsifying dosage forms are known in the art and include, but are not limited to, for example, U.S. Pat. Nos.5,858,401, 6,667,048, and 6,960,563, each of which is specifically incorporated by reference. [00466] It is to be appreciated that there is overlap between the above-listed additives used in the aqueous dispersions or suspensions described herein, since a given additive is often classified differently by different practitioners in the field, or is commonly used for any of several different functions.
- Intranasal Formulations [00467] Intranasal formulations are known in the art and are described in, for example, U.S. Pat. Nos. 4,476,116, 5,116,817, and 6,391,452, each of which is specifically incorporated by reference.
- Formulations that include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) which are prepared according to these and other techniques well-known in the art are prepared as solutions in saline, employing benzyl alcohol or other suitable preservatives, fluorocarbons, and/or other solubilizing or dispersing agents known in the art. See, for example, Ansel, H. C. et al., Pharmaceutical Dosage Forms and Drug Delivery Systems, Sixth Ed. (1995). Preferably these compositions and formulations are prepared with suitable nontoxic pharmaceutically acceptable ingredients.
- nasal dosage forms generally contain large amounts of water in addition to the active ingredient. Minor amounts of other ingredients such as pH adjusters, emulsifiers or dispersing agents, preservatives, surfactants, gelling agents, or buffering and other stabilizing and solubilizing agents may also be present.
- the nasal dosage form should be isotonic with nasal secretions.
- the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein may be in a form as an aerosol, a mist or a powder.
- Pharmaceutical compositions described herein are conveniently delivered in the form of an aerosol spray presentation from pressurized packs or a nebuliser, with the use of a suitable propellant, e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetrafluoroethane, carbon dioxide or other suitable gas.
- the dosage unit may be determined by providing a valve to deliver a metered amount.
- Capsules and cartridges of, such as, by way of example only, gelatin for use in an inhaler or insufflator may be formulated containing a powder mix of the compound described herein and a suitable powder base such as lactose or starch.
- Buccal Formulations [00469] Buccal formulations that include compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be administered using a variety of formulations known in the art.
- such formulations include, but are not limited to, U.S. Pat. Nos. 4,229,447, 4,596,795, 4,755,386, and 5,739,136, each of which is specifically incorporated by reference.
- the buccal dosage forms described herein can further include a bioerodible (hydrolysable) polymeric carrier that also serves to adhere the dosage form to the buccal mucosa.
- the buccal dosage form is fabricated so as to erode gradually over a predetermined time period, wherein the delivery of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) is provided essentially throughout.
- Buccal drug delivery avoids the disadvantages encountered with oral drug administration, e.g., slow absorption, degradation of the active agent by fluids present in the gastrointestinal tract and/or first-pass inactivation in the liver.
- the bioerodible (hydrolysable) polymeric carrier it will be appreciated that virtually any such carrier can be used, so long as the desired drug release profile is not compromised, and the carrier is compatible with the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and any other components that may be present in the buccal dosage unit.
- the polymeric carrier comprises hydrophilic (water-soluble and water- swellable) polymers that adhere to the wet surface of the buccal mucosa.
- Transdermal Formulations [00470] Transdermal formulations described herein may be administered using a variety of devices which have been described in the art.
- such devices include, but are not limited to, U.S. Pat. Nos. 3,598,122, 3,598,123, 3,710,795, 3,731,683, 3,742,951, 3,814,097, 3,921,636, 3,972,995, 3,993,072, 3,993,073, 3,996,934, 4,031,894, 4,060,084, 4,069,307, 4,077,407, 4,201,211, 4,230,105, 4,292,299, 4,292,303, 5,336,168, 5,665,378, 5,837,280, 5,869,090, 6,923,983, 6,929,801 and 6,946,144, each of which is specifically incorporated by reference in its entirety.
- transdermal dosage forms described herein may incorporate certain pharmaceutically acceptable excipients which are conventional in the art.
- the transdermal formulations described herein include at least three components: (1) a formulation of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) (2) a penetration enhancer; and (3) an aqueous adjuvant.
- transdermal formulations can include additional components such as, but not limited to, gelling agents, creams and ointment bases, and the like.
- the transdermal formulation can further include a woven or non-woven backing material to enhance absorption and prevent the removal of the transdermal formulation from the skin.
- the transdermal formulations described herein can maintain a saturated or supersaturated state to promote diffusion into the skin.
- Formulations suitable for transdermal administration of compounds described herein may employ transdermal delivery devices and transdermal delivery patches and can be lipophilic emulsions or buffered, aqueous solutions, dissolved and/or dispersed in a polymer or an adhesive. Such patches may be constructed for continuous, pulsatile, or on demand delivery of pharmaceutical agents.
- transdermal delivery of the compounds described herein can be accomplished by means of iontophoretic patches and the like.
- transdermal patches can provide controlled delivery of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd).
- the rate of absorption can be slowed by using rate-controlling membranes or by trapping the compound within a polymer matrix or gel.
- absorption enhancers can be used to increase absorption.
- An absorption enhancer or carrier can include absorbable pharmaceutically acceptable solvents to assist passage through the skin.
- transdermal devices are in the form of a bandage comprising a backing member, a reservoir containing the compound optionally with carriers, optionally a rate controlling barrier to deliver the compound to the skin of the host at a controlled and predetermined rate over a prolonged period of time, and means to secure the device to the skin.
- Formulations that include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) suitable for intramuscular, subcutaneous, or intravenous injection may include physiologically acceptable sterile aqueous or non-aqueous solutions, dispersions, suspensions or emulsions, and sterile powders for reconstitution into sterile injectable solutions or dispersions.
- aqueous and non- aqueous carriers examples include water, ethanol, polyols (propyleneglycol, polyethylene-glycol, glycerol, cremophor and the like), suitable mixtures thereof, vegetable oils (such as olive oil) and injectable organic esters such as ethyl oleate.
- a coating such as lecithin
- surfactants such as surfactants.
- Formulations suitable for subcutaneous injection may also contain additives such as preserving, wetting, emulsifying, and dispensing agents.
- antibacterial and antifungal agents such as parabens, chlorobutanol, phenol, sorbic acid, and the like. It may also be desirable to include isotonic agents, such as sugars, sodium chloride, and the like. Prolonged absorption of the injectable pharmaceutical form can be brought about by the use of agents delaying absorption, such as aluminum monostearate and gelatin.
- compounds described herein may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as Hank’s solution, Ringer’s solution, or physiological saline buffer.
- penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art.
- appropriate formulations may include aqueous or nonaqueous solutions, preferably with physiologically compatible buffers or excipients. Such excipients are generally known in the art.
- Parenteral injections may involve bolus injection or continuous infusion. Formulations for injection may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative.
- compositions described herein may be in a form suitable for parenteral injection as a sterile suspensions, solutions, or emulsions in oily or aqueous vehicles, and may contain formulatory agents such as suspending, stabilizing and/or dispersing agents.
- Pharmaceutical compositions for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions.
- Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes.
- Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran.
- the suspension may also contain suitable stabilizers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions.
- the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile pyrogen-free water, before use.
- a suitable vehicle e.g., sterile pyrogen-free water
- compositions provided herein can also include an mucoadhesive polymer, selected from among, for example, carboxymethylcellulose, carbomer (acrylic acid polymer), poly(methylmethacrylate), polyacrylamide, polycarbophil, acrylic acid/butyl acrylate copolymer, sodium alginate and dextran.
- an mucoadhesive polymer selected from among, for example, carboxymethylcellulose, carbomer (acrylic acid polymer), poly(methylmethacrylate), polyacrylamide, polycarbophil, acrylic acid/butyl acrylate copolymer, sodium alginate and dextran.
- the compounds described herein may be administered topically and can be formulated into a variety of topically administrable compositions, such as solutions, suspensions, lotions, gels, pastes, medicated sticks, balms, creams, or ointments.
- Such pharmaceutical compounds can contain solubilizers, stabilizers, tonicity enhancing agents, buffers, and preservatives.
- the compounds described herein may also be formulated in rectal compositions such as enemas, rectal gels, rectal foams, rectal aerosols, suppositories, jelly suppositories, or retention enemas, containing conventional suppository bases such as cocoa butter or other glycerides, as well as synthetic polymers such as polyvinylpyrrolidone, PEG, and the like.
- a low-melting wax such as, but not limited to, a mixture of fatty acid glycerides, optionally in combination with cocoa butter is first melted.
- the compounds described herein can be used in the preparation of medicaments for the inhibition of FLT3 or a homolog thereof, or for the treatment of diseases or conditions that would benefit, at least in part, from inhibition of FLT3 or a homolog thereof.
- a method for treating any of the diseases or conditions described herein in a subject in need of such treatment involves administration of pharmaceutical compositions containing at least one compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein, or a pharmaceutically acceptable salt, pharmaceutically acceptable N-oxide, pharmaceutically active metabolite, pharmaceutically acceptable prodrug, or pharmaceutically acceptable solvate thereof, in therapeutically effective amounts to said subject.
- the compositions containing the compound(s) described herein can be administered for prophylactic and/or therapeutic treatments.
- compositions are administered to a patient already suffering from a disease or condition, in an amount sufficient to cure or at least partially arrest the symptoms of the disease or condition. Amounts effective for this use will depend on the severity and course of the disease or condition, previous therapy, the patient’s health status, weight, and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such therapeutically effective amounts by routine experimentation (including, but not limited to, a dose escalation clinical trial). [00481] In prophylactic applications, compositions containing the compounds described herein are administered to a patient susceptible to or otherwise at risk of a particular disease, disorder, or condition.
- Such an amount is defined to be a “prophylactically effective amount or dose.”
- the precise amounts also depend on the patient’s state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation (e.g., a dose escalation clinical trial).
- effective amounts for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient’s health status and response to the drugs, and the judgment of the treating physician.
- the administration of the compounds may be administered chronically, that is, for an extended period of time, including throughout the duration of the patient’s life in order to ameliorate or otherwise control or limit the symptoms of the patient’s disease or condition.
- the administration of the compounds may be given continuously; alternatively, the dose of drug being administered may be temporarily reduced or temporarily suspended for a certain length of time (i.e., a “drug holiday”).
- the length of the drug holiday can vary between 2 days and 1 year, including by way of example only, 2 days, 3 days, 4 days, 5 days, 6 days, 7 days, 10 days, 12 days, 15 days, 20 days, 28 days, 35 days, 50 days, 70 days, 100 days, 120 days, 150 days, 180 days, 200 days, 250 days, 280 days, 300 days, 320 days, 350 days, or 365 days.
- the dose reduction during a drug holiday may be from 10%-100%, including, by way of example only, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 100%.
- a maintenance dose is administered if necessary. Subsequently, the dosage or the frequency of administration, or both, can be reduced, as a function of the symptoms, to a level at which the improved disease, disorder or condition is retained. Patients can, however, require intermittent treatment on a long-term basis upon any recurrence of symptoms.
- the amount of a given agent that will correspond to such an amount will vary depending upon factors such as the particular compound, disease or condition and its severity, the identity (e.g., weight) of the subject or host in need of treatment, but can nevertheless be routinely determined in a manner known in the art according to the particular circumstances surrounding the case, including, e.g., the specific agent being administered, the route of administration, the condition being treated, and the subject or host being treated. In general, however, doses employed for adult human treatment will typically be in the range of 0.02-5000 mg per day, or from about 1-1500 mg per day.
- the desired dose may conveniently be presented in a single dose or as divided doses administered simultaneously (or over a short period of time) or at appropriate intervals, for example as two, three, four or more sub-doses per day.
- the pharmaceutical composition described herein may be in unit dosage forms suitable for single administration of precise dosages.
- the formulation is divided into unit doses containing appropriate quantities of one or more compound.
- the unit dosage may be in the form of a package containing discrete quantities of the formulation.
- Non-limiting examples are packaged tablets or capsules, and powders in vials or ampoules.
- Aqueous suspension compositions can be packaged in single- dose non-reclosable containers.
- multiple-dose reclosable containers can be used, in which case it is typical to include a preservative in the composition.
- formulations for parenteral injection may be presented in unit dosage form, which include, but are not limited to ampoules, or in multi-dose containers, with an added preservative.
- Toxicity and therapeutic efficacy of such therapeutic regimens can be determined by standard pharmaceutical procedures in cell cultures or experimental animals, including, but not limited to, the determination of the LD50 (the dose lethal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population).
- the dose ratio between the toxic and therapeutic effects is the therapeutic index and it can be expressed as the ratio between LD50 and ED50.
- Compounds exhibiting high therapeutic indices are preferred.
- the data obtained from cell culture assays and animal studies can be used in formulating a range of dosage for use in human.
- the dosage of such compounds lies preferably within a range of circulating concentrations that include the ED50 with minimal toxicity.
- the dosage may vary within this range depending upon the dosage form employed and the route of administration utilized Methods of Treatment.
- methods of treating, ameliorating, or preventing a disease or condition in a patient in need thereof comprising administering an amount of a compound described herein to treat, ameliorate, or prevent the disease or condition.
- methods of treating, ameliorating, or preventing a disease or condition in a patient in need thereof comprising administering an amount of a pharmaceutical composition described herein to treat, ameliorate, or prevent the disease or condition.
- provided herein are any of the compounds described herein for use in therapy.
- provided herein are any of the pharmaceutical compositions described herein for use in therapy.
- provided herein are any of the compounds described herein for use in treating, ameliorating, or preventing a disease or condition in a patient in need thereof.
- provided herein are any of the pharmaceutical compositions described herein for use in treating, ameliorating, or preventing a disease or condition in a patient in need thereof.
- provided herein are any of the compounds described herein for use the manufacture of a medicament for therapy.
- provided herein are any of the pharmaceutical compositions described herein for therapy.
- provided herein are any of the compounds described herein for use the manufacture of a medicament for treating, ameliorating, or preventing a disease or condition in a patient in need thereof.
- the disease or condition is associated with FLT3 dysfunction.
- the disease or condition is associated with undesired FLT3 expression.
- the disease or condition is associated with excessive FLT3 expression.
- the disease or condition is associated with undesired FLT3 levels.
- the disease or condition is associated with excessive FLT3 levels.
- the disease or condition is associated with undesired FLT3 activity.
- the disease or condition is associated with excessive FLT3 activity. In certain embodiments, the disease or condition is associated with undesired FLT3-MLL interaction. In certain embodiments, the disease or condition is associated with excessive FLT3-MLL interaction. In certain embodiments, the disease or condition is amenable to treatment by inhibiting FLT3 expression. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3 expression. In certain embodiments, the disease or condition is amenable to treatment by inhibiting FLT3 levels. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3 levels. In certain embodiments, the disease or condition is amenable to treatment by inhibiting undesired FLT3 activity.
- the disease or condition is amenable to treatment by inhibiting excessive FLT3 activity. In certain embodiments, the disease or condition is amenable to treatment by inhibiting FLT3-MLL interaction. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3- MLL interaction. [00491] In certain embodiments, the disease or condition is associated with a mutation in the FLT3 gene. In certain embodiments, the mutation in the FLT3 gene is an internal tandem duplicate mutation (FLT3- IND). In certain embodiments, the FLT3-IND mutation is a D835 mutation. In one embodiment, the FLT3-IND mutation is D835V. In certain embodiments, the FLT3-IND mutation is D835Y.
- the mutation is a point mutation in the tyrosine kinase domain (FLT3-TKD).
- the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof.
- the FLT3 mutation is N676K.
- the FLT3 mutation is F691L.
- the FLT3 mutation is D835H.
- the FLT3 mutation is D835V.
- the FLT3 mutation is D835Y.
- the FLT3 mutation is Y842C.
- the patient has an NPM1 mutation.
- compounds provided herein are administered to a human.
- compounds provided herein are orally administered.
- the disease or condition is a hematologic malignancy, including, but not limited to, leukemia, lymphoma, or multiple myeloma.
- the disease or condition is a leukemia, including, but not limited to, acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), acute prolymphocytic leukemia (APL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), chronic neutrophilic leukemia (CNL), acute undifferentiated leukemia (AUL), anaplastic large cell lymphoma (ALCL), prolymphocytic leukemia (PML), juvenile myelomonocytic leukemia (JMML), adult T cell ALL, or myeloproliferative disorder (MPD), mast-cell lymphoma (MCC), or myelodysplastic syndromes (MDS).
- ALL acute lymphocytic leukemia
- AML acute myeloid leukemia
- CLL chronic lympho
- the disease or condition is acute myeloid leukemia (AML). In certain embodiments, the disease or condition is relapsed or refractory AML. [00495] In certain embodiments, the disease or condition is a lymphoma, including, but not limited to, non-Hodgkin’s lymphoma or Hodgkin’s lymphoma.
- the disease or condition is non-Hodgkin’s lymphoma, including, but not limited to, B-cell lymphoma, diffuse large B-cell lymphoma (DLBCL), T-cell lymphoma, Burkitt’s lymphoma, follicular lymphoma (FL), mantle cell lymphoma, primary mediastinal B cell lymphoma, small lymphocytic lymphoma, or Waldenstrom macroglobulinemia (lymphoplasmacytic lymphoma).
- B-cell lymphoma diffuse large B-cell lymphoma (DLBCL), T-cell lymphoma, Burkitt’s lymphoma, follicular lymphoma (FL), mantle cell lymphoma, primary mediastinal B cell lymphoma, small lymphocytic lymphoma, or Waldenstrom macroglobulinemia (lymphoplasmacytic lymphoma).
- B-cell lymphoma diffuse large B-cell lymphoma (DL
- the disease or condition is Hodgkin’s lymphoma, including but not limited to, lymphocyte-deleted Hodgkin’s disease, lymphocyte-rich Hodgkin’s disease, mixed cellularity Hodgkin’s lymphoma, nodular lymphocyte-predominant Hodgkin’s disease, or nodular sclerosis Hodgkin’s lymphoma.
- the disease or condition is multiple myeloma. In one embodiment, the multiple myeloma is hyperdiploid. In one embodiment, the multiple myeloma is hypodiploid. [00497] In certain embodiments, the disease or condition is relapsed or refractory.
- the disease or condition is relapsed or refractory acute myeloid leukemia (AML). In certain embodiments, the disease or condition is newly diagnosed. In one embodiment, the disease or condition is newly diagnosed AML.
- Combination Treatments [00498]
- the FLT3 inhibitor compositions described herein can also be used in combination with other well-known therapeutic reagents that are selected for their therapeutic value for the condition to be treated. In general, the compositions described herein and, in embodiments where combinational therapy is employed, other agents do not have to be administered in the same pharmaceutical composition, and may, because of different physical and chemical characteristics, have to be administered by different routes.
- the determination of the mode of administration and the advisability of administration, where possible, in the same pharmaceutical composition, is well within the knowledge of the skilled clinician.
- the initial administration can be made according to established protocols known in the art, and then, based upon the observed effects, the dosage, modes of administration and times of administration can be modified by the skilled clinician.
- one of the side effects experienced by a patient upon receiving one of the FLT3 inhibitor compounds described herein is nausea, then it may be appropriate to administer an anti-nausea agent in combination with the initial therapeutic agent.
- the therapeutic effectiveness of one of the compounds described herein may be enhanced by administration of an adjuvant (i.e., by itself the adjuvant may have minimal therapeutic benefit, but in combination with another therapeutic agent, the overall therapeutic benefit to the patient is enhanced).
- the benefit experienced by a patient may be increased by administering one of the compounds described herein with another therapeutic agent (which also includes a therapeutic regimen) that also has therapeutic benefit.
- the overall benefit experienced by the patient may simply be additive of the two therapeutic agents or the patient may experience a synergistic benefit.
- the particular choice of compounds used will depend upon the diagnosis of the attending physicians and their judgment of the condition of the patient and the appropriate treatment protocol.
- the compounds may be administered concurrently (e.g., simultaneously, essentially simultaneously or within the same treatment protocol) or sequentially, depending upon the nature of the disease, disorder, or condition, the condition of the patient, and the actual choice of compounds used.
- the determination of the order of administration, and the number of repetitions of administration of each therapeutic agent during a treatment protocol, is well within the knowledge of the skilled physician after evaluation of the disease being treated and the condition of the patient.
- therapeutically-effective dosages can vary when the drugs are used in treatment combinations. Methods for experimentally determining therapeutically- effective dosages of drugs and other agents for use in combination treatment regimens are described in the literature.
- Combination treatment further includes periodic treatments that start and stop at various times to assist with the clinical management of the patient.
- dosages of the co-administered compounds will of course vary depending on the type of co-drug employed, on the specific drug employed, on the disease or condition being treated and so forth.
- the compound provided herein may be administered either simultaneously with the biologically active agent(s), or sequentially.
- the multiple therapeutic agents may be administered in any order or even simultaneously. If simultaneously, the multiple therapeutic agents may be provided in a single, unified form, or in multiple forms (by way of example only, either as a single pill or as two separate pills). One of the therapeutic agents may be given in multiple doses, or both may be given as multiple doses.
- the timing between the multiple doses may vary from more than zero weeks to less than four weeks.
- the combination methods, compositions and formulations are not to be limited to the use of only two agents; the use of multiple therapeutic combinations are also envisioned.
- the dosage regimen to treat, prevent, or ameliorate the condition(s) for which relief is sought can be modified in accordance with a variety of factors. These factors include the disorder from which the subject suffers, as well as the age, weight, sex, diet, and medical condition of the subject. Thus, the dosage regimen actually employed can vary widely and therefore can deviate from the dosage regimens set forth herein.
- the pharmaceutical agents which make up the combination therapy disclosed herein may be a combined dosage form or in separate dosage forms intended for substantially simultaneous administration.
- the pharmaceutical agents that make up the combination therapy may also be administered sequentially, with either therapeutic compound being administered by a regimen calling for two-step administration.
- the two-step administration regimen may call for sequential administration of the active agents or spaced- apart administration of the separate active agents.
- the time period between the multiple administration steps may range from, a few minutes to several hours, depending upon the properties of each pharmaceutical agent, such as potency, solubility, bioavailability, plasma half-life, and kinetic profile of the pharmaceutical agent. Circadian variation of the target molecule concentration may also determine the optimal dose interval.
- the compounds described herein also may be used in combination with procedures that may provide additional or synergistic benefit to the patient.
- patients are expected to find therapeutic and/or prophylactic benefit in the methods described herein, wherein pharmaceutical composition of a compound disclosed herein and /or combinations with other therapeutics are combined with genetic testing to determine whether that individual is a carrier of a mutant gene that is known to be correlated with certain diseases or conditions.
- the compounds described herein and combination therapies can be administered before, during or after the occurrence of a disease or condition, and the timing of administering the composition containing a compound can vary.
- the compounds can be used as a prophylactic and can be administered continuously to subjects with a propensity to develop conditions or diseases in order to prevent the occurrence of the disease or condition.
- the compounds and compositions can be administered to a subject during or as soon as possible after the onset of the symptoms.
- the administration of the compounds can be initiated within the first 48 hours of the onset of the symptoms, within the first 6 hours of the onset of the symptoms, or within 3 hours of the onset of the symptoms.
- the initial administration can be via any route practical, such as, for example, an intravenous injection, a bolus injection, infusion over 5 minutes to about 5 hours, a pill, a capsule, transdermal patch, buccal delivery, and the like, or combination thereof.
- a compound should be administered as soon as is practicable after the onset of a disease or condition is detected or suspected, and for a length of time necessary for the treatment of the disease, such as, for example, from about 1 month to about 3 months.
- the length of treatment can vary for each subject, and the length can be determined using the known criteria.
- the compound or a formulation containing the compound can be administered for at least 2 weeks, between about 1 month to about 5 years, or from about 1 month to about 3 years.
- exemplary Therapeutic Agents for Use in Combination with a FLT3 inhibitor Compound include Adriamycin, Dactinomycin, Bleomycin, Vinblastine, Cisplatin, acivicin; aclarubicin; acodazole hydrochloride; acronine; adozelesin; aldesleukin; altretamine; ambomycin; ametantrone acetate; aminoglutethimide; amsacrine; anastrozole; anthramycin; asparaginase; asperlin; azacitidine; azetepa; azotomycin; batimastat; benzodepa; bicalutamide; bisantrene hydrochloride; bisnafide dimesylate; bizelesin; bleomycin sulfate; brequinar sodium; bropirimine; busulfan; cactin
- anti-cancer agents that can be employed in combination with an FLT3 inhibitor compound include: 20-epi-1, 25 dihydroxyvitamin D3; 5-ethynyluracil; abiraterone; aclarubicin; acylfulvene; adecypenol; adozelesin; aldesleukin; ALL-TK antagonists; altretamine; ambamustine; amidox; amifostine; aminolevulinic acid; amrubicin; amsacrine; anagrelide; anastrozole; andrographolide; angiogenesis irreversible inhibitors; antagonist D; antagonist G; antarelix; anti-dorsalizing morphogenetic protein-1; antiandrogen, prostatic carcinoma; antiestrogen; antineoplaston; antisense oligonucleotides; aphidicolin glycinate; apoptosis gene modulators; apoptosis regulators; ap
- nitrogen mustards e.g., mechloroethamine, cyclophosphamide, chlorambucil, etc.
- alkyl sulfonates e.g., busulfan
- nitrosoureas e.g., carmustine, lomusitne, etc.
- triazenes decarbazine, etc.
- antimetabolites include but are not limited to folic acid analog (e.g., methotrexate), or pyrimidine analogs (e.g., Cytarabine), purine analogs (e.g., mercaptopurine, thioguanine, pentostatin).
- folic acid analog e.g., methotrexate
- pyrimidine analogs e.g., Cytarabine
- purine analogs e.g., mercaptopurine, thioguanine, pentostatin.
- Yet other anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include Menin inhibitors.
- Anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include WDR5 inhibitors.
- Anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include KRAS inhibitors.
- Examples of natural products useful in combination with an FLT3 inhibitor compound described herein include, but are not limited to, vinca alkaloids (e.g., vinblastin, vincristine), epipodophyllotoxins (e.g., etoposide), antibiotics (e.g., daunorubicin, doxorubicin, bleomycin), enzymes (e.g., L-asparaginase), or biological response modifiers (e.g., interferon alpha).
- vinca alkaloids e.g., vinblastin, vincristine
- epipodophyllotoxins e.g., etoposide
- antibiotics e.g., daunorubicin, doxorubicin, bleomycin
- enzymes e.g., L-asparaginase
- biological response modifiers e.g., interferon alpha
- alkylating agents that can be employed in combination an FLT3 inhibitor compound described herein include, but are not limited to, nitrogen mustards (e.g., mechloroethamine, cyclophosphamide, chlorambucil, meiphalan, etc.), ethylenimine and methylmelamines (e.g., hexamethlymelamine, thiotepa), alkyl sulfonates (e.g., busulfan), nitrosoureas (e.g., carmustine, lomusitne, semustine, streptozocin, etc.), or triazenes (decarbazine, etc.).
- nitrogen mustards e.g., mechloroethamine, cyclophosphamide, chlorambucil, meiphalan, etc.
- ethylenimine and methylmelamines e.g., hexamethlymelamine, thiotepa
- antimetabolites include, but are not limited to folic acid analog (e.g., methotrexate), or pyrimidine analogs (e.g., fluorouracil, floxouridine, Cytarabine), purine analogs (e.g., mercaptopurine, thioguanine, pentostatin.
- folic acid analog e.g., methotrexate
- pyrimidine analogs e.g., fluorouracil, floxouridine, Cytarabine
- purine analogs e.g., mercaptopurine, thioguanine, pentostatin.
- hormones and antagonists useful in combination with an FLT3 inhibitor compound described herein include, but are not limited to, adrenocorticosteroids (e.g., prednisone), progestins (e.g., hydroxyprogesterone caproate, megestrol acetate, medroxyprogesterone acetate), estrogens (e.g., diethlystilbestrol, ethinyl estradiol), antiestrogen (e.g., tamoxifen), androgens (e.g., testosterone propionate, fluoxymesterone), antiandrogen (e.g., flutamide), gonadotropin releasing hormone analog (e.g., leuprolide).
- adrenocorticosteroids e.g., prednisone
- progestins e.g., hydroxyprogesterone caproate, megestrol acetate, medroxyprogesterone acetate
- platinum coordination complexes e.g., cisplatin, carboblatin
- anthracenedione e.g., mitoxantrone
- substituted urea e.g., hydroxyurea
- methyl hydrazine derivative e.g., procarbazine
- adrenocortical suppressant e.g., mitotane, aminoglutethimide
- anti-cancer agents which act by arresting cells in the G2-M phases due to stabilized microtubules and which can be used in combination with an FLT3 inhibitor compound described herein include without limitation the following marketed drugs and drugs in development: Erbulozole (also known as R-55104), Dolastatin 10 (also known as DLS-10 and NSC-376128), Mivobulin isethionate (also known as CI-980), Vincristine, NSC-639829, Discodermolide (also known as NVP-XX-A-296), ABT-751 (Abbott, also known as E-7010), Altorhyrtins (such as Altorhyrtin A and Altorhyrtin C), Spongistatins (such as Spongistatin 1, Spongistatin 2, Spongistatin 3, Spongistatin 4, Spongistatin 5, Spongistatin 6, Spongistatin 7, Spongistatin 8, and Spongistatin 9
- FLT3 inhibitors described herein can also be administered in combination with other FLT3 inhibitors, including, but not limited to sorafenib, midostaurin, lestaurtinib, sunitinib, tandutinib, gilteritinib, crenolanib, quizartinib, FF-10101, and HM43239.
- Kits/Articles of Manufacture [00519] For use in the therapeutic applications described herein, kits and articles of manufacture are also described herein.
- kits can include a carrier, package, or container that is compartmentalized to receive one or more containers such as vials, tubes, and the like, each of the container(s) including one of the separate elements to be used in a method described herein.
- Suitable containers include, for example, bottles, vials, syringes, and test tubes.
- the containers can be formed from a variety of materials such as glass or plastic.
- the articles of manufacture provided herein contain packaging materials. Packaging materials for use in packaging pharmaceutical products are well known to those of skill in the art. See, e.g., U.S. Patent Nos. 5,323,907, 5,052,558 and 5,033,252.
- Examples of pharmaceutical packaging materials include, but are not limited to, blister packs, bottles, tubes, inhalers, pumps, bags, vials, containers, syringes, bottles, and any packaging material suitable for a selected formulation and intended mode of administration and treatment.
- a wide array of formulations of the compounds and compositions provided herein are contemplated as are a variety of treatments for any disease, disorder, or condition that would benefit by inhibition of FLT3, or in which FLT3 is a mediator or contributor to the symptoms or cause.
- the container(s) can include one or more compounds described herein, optionally in a composition or in combination with another agent as disclosed herein.
- kits optionally have a sterile access port (for example the container can be an intravenous solution bag or a vial having a stopper pierceable by a hypodermic injection needle).
- kits optionally comprising a compound with an identifying description or label or instructions relating to its use in the methods described herein.
- a kit will typically may include one or more additional containers, each with one or more of various materials (such as reagents, optionally in concentrated form, and/or devices) desirable from a commercial and user standpoint for use of a compound described herein.
- a label can be on or associated with the container.
- a label can be on a container when letters, numbers or other characters forming the label are attached, molded or etched into the container itself; a label can be associated with a container when it is present within a receptacle or carrier that also holds the container, e.g., as a package insert.
- a label can be used to indicate that the contents are to be used for a specific therapeutic application.
- the pharmaceutical compositions can be presented in a pack or dispenser device which can contain one or more unit dosage forms containing a compound provided herein.
- the pack can for example contain metal or plastic foil, such as a blister pack.
- the pack or dispenser device can be accompanied by instructions for administration.
- the pack or dispenser can also be accompanied with a notice associated with the container in form prescribed by a governmental agency regulating the manufacture, use, or sale of pharmaceuticals, which notice is reflective of approval by the agency of the form of the drug for human or veterinary administration.
- Such notice for example, can be the labeling approved by the U.S. Food and Drug Administration for prescription drugs, or the approved product insert.
- compositions containing a compound provided herein formulated in a compatible pharmaceutical carrier can also be prepared, placed in an appropriate container, and labeled for treatment of an indicated condition.
- EXAMPLES [00525] The following specific and non-limiting examples are to be construed as merely illustrative, and do not limit the present disclosure in any way whatsoever. Without further elaboration, it is believed that one skilled in the art can, based on the description herein, utilize the present disclosure to its fullest extent. All publications cited herein are hereby incorporated by reference in their entirety. Where reference is made to a URL or other such identifier or address, it is understood that such identifiers can change and particular information on the internet can come and go, but equivalent information can be found by searching the internet.
- Step 2 Methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylate
- Step 3 3-Chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 5 6-Ethyl-3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
- 6-ethyl-3-((3-methoxyphenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (1.9 g, 5.12 mmol, 1 eq) in DCM (8 mL) at 0 °C
- BBr3 (3.97 g, 15.86 mmol, 1.53 mL, 3.1 eq) was added.
- Step 2 tert-Butyl (3-(3-aminophenoxy)propyl)carbamate [00533] To a mixture of tert-butyl (3-(3-nitrophenoxy)propyl)carbamate (26 g, 87.74 mmol, 1 eq) and Fe (22.05 g, 394.85 mmol, 4.5 eq) in EtOH (400 mL) and H2O (200 mL) at 25 °C, NH4Cl (21.12 g, 394.85 mmol, 4.5 eq) was added. The mixture was stirred at 80 °C for 1 hour. LCMS showed the reaction was completed. The reaction was filtered.
- Step 5 tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
- 3-((3-(3-aminopropoxy)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide 3.5 g, 10.01 mmol, 1 eq)
- TCFH (4.21 g, 15.01 mmol, 1.5 eq)
- 1-methylimidazole (8.21 g, 100.05 mmol, 7.98 mL, 10 eq) in DMF (35 mL) at 25 °C, N-(tert-butoxycarbonyl)-N-methyl-L-alanine (3.05 g, 15.01 mmol, 1.5
- Step 2 methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylate
- Step 3 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 4 tert-butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate
- Step 6 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- 2-(3-amino-5-methoxyphenyl)acetonitrile 200 mg, 1.23 mmol, 1 eq
- 3-chloro- 6-ethyl-5-(tetrahydropyran-4-ylamino)pyrazine-2-carboxamide (351.12 mg, 1.23 mmol, 1 eq)
- t-AmylOH 5 mL
- Xantphos 71.35 mg, 123.31 ⁇ mol, 0.1 eq
- Cs 2 CO 3 (1.81 g, 5.55 mmol, 4.5 eq
- Xantphos Pd G4 106.11 mg, 123.31 ⁇ mol, 0.1
- Step 7 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide 100 mg, 243.62 ⁇ mol, 1 eq
- NH3.H2O 121.97 mg, 1.22 mmol, 134.03 ⁇ L, 35% purity, 5 eq
- Raney-Ni 20.87 mg, 243.62 ⁇ mol, 1 eq
- the suspension was degassed and purged with H2 for 3 times.
- the mixture was stirred under H2 (491.10 ⁇ g, 243.62 ⁇ mol, 1 eq, 50 PSI) at 25 °C for 2 hrs.
- LCMS showed the reaction was completed.
- the reaction mixture was filtered and concentrated in vacuum.
- Step 2 tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)carbamate
- tert-butyl (3-amino-5-methoxyphenethyl)carbamate (1.65 g, 7.51 mmol, 1 eq)
- 3,5-dichloro-6-ethylpyrazine-2-carboxamide (2 g, 7.51 mmol, 1 eq) in872-50-4 (5mL) was added DIPEA (19.41 g, 150.19 mmol, 26.16 mL, 20 eq). The mixture was stirred at 140°C for 24h under N 2.
- Step 2 3-((3-(2-aminoethyl)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide
- Step 5 2-(3-amino-5-fluorophenyl)acetonitrile
- LC-MS showed reaction was completed.
- the reaction mixture was poured into saturated Na 2 CO 3 (50 mL) and extracted with EA 150 mL (50 mL * 3).
- Step 7 tert-butyl (3-amino-5-fluorophenethyl)carbamate
- Step 8 tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)carbamate [00563] To a solution of tert-butyl (3-amino-5-fluorophenethyl)carbamate (2 g, 7.86 mmol, 1 eq) and 3,5-dichloro-6-ethylpyrazine-2-carboxamide (1.73 g, 7.86 mmol, 1 eq) in NMP (4 mL) was added DIPEA (40.66 g, 314.59 mmol, 54.80 mL, 40 eq).The mixture was stirred at 140 °C for 36 hrs.
- Step 10 tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate [00565] To a solution of 3-((3-(2-aminoethyl)-5-fluorophenyl)amino)-5-chloro-6-ethylpyrazine-2- carboxamide (1 g, 2.96 mmol, 1 eq) and N-(tert-butoxycarbonyl)-N-methyl-L-alanine (902.52 mg, 4.44 mmol, 1.5 eq) in DMF (15 mL) was added 1-methyl-1H-imidazole (2.43 g, 29.61 mmol, 2.36 mL, 10 eq) and chloro-N,N,N’,N’
- Step 3 3,5-dichloro-6-ethylpyrazine-2-carbonyl chloride
- DCM 3,5-dichloro-6-ethyl-pyrazine-2-carboxylic acid
- Step 2 (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine [00571] To a solution of tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alaninate (1 g, 3.70 mmol, 1 eq) TFA (7.70 g, 67.53 mmol, 5 mL, 18.26 eq) in DCM (10 mL) at 25°C. The mixture was stirred at 25 °C for 2hrs. LCMS indicated the reaction was completed.
- Step 2 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide
- Step 1 tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)carbamate
- Step 2 tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)carbamate
- tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate 400 mg, 952.60 ⁇ mol, 1 eq) and N-methylpropan-2-amine (696.70 mg, 9.53 mmol, 992.44 ⁇ L, 10 eq) in DMA (10 mL) was added DIPEA (123.12 mg, 952.60 ⁇ mol, 165.93 ⁇ L, 1 eq) at 20 °C.
- Step 3 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
- Step 5 (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
- Step 2 tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl) amino) phenethyl) carbamate
- tert-butyl (3-aminophenethyl)carbamate (6.08 g, 25.72 mmol, 1 eq) in NMP (50 mL) at 16 °C, DIPEA (66.49 g, 514.49 mmol, 89.61 mL, 20 eq) was added.
- Step 2 3-((3-(2-aminoethyl) phenyl) amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide
- Step 3 tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate
- N-(tert-butoxycarbonyl)-N-methyl-L-alanine (1.16 g, 5.69 mmol, 1.1 eq)
- DIPEA (6.69 g, 51.75 mmol, 10 eq) 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6- methylpyrazine-2-carboxamide (1.8 g, 5.17 mmol, 1 eq, HCl) was added at 0 °C, and then BOP (3.43 g, 7.76 mmol, 1.5 eq) was added at
- Step 4 (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
- Step 2 tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl)amino)phenethyl)carbamate
- 3,5-dichloro-6-methylpyrazine-2-carboxamide 1.7 g, 8.25 mmol, 1 eq
- tert- butyl (3-aminophenethyl)carbamate 1.95 g, 8.25 mmol, 1 eq
- NMP 30 mL
- DIPEA 31.99 g, 247.54 mmol, 43.12 mL, 30 eq
- Step 2 3-((3-(4-Aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
- tert-butyl 4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino) phenoxy)butyl)carbamate (380 mg, 718.82 ⁇ mol, 1 eq) and HCl/EtOAc (4 M, 60.00 mL, 333.88 eq) was stirred at 25 °C for 2 h.
- Step 3 3-((3-(4-Acrylamidobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- TEA 174.09 mg, 1.72 mmol, 239.47 ⁇ L, 10 eq
- DCM 3 mL
- acryloyl chloride 23.36 mg, 258.07 ⁇ mol, 21.04 ⁇ L, 1.5 eq
- Step 2 tert-Butyl (3-(3-aminophenyl)prop-2-yn-1-yl)carbamate [00606] To the solution of tert-butyl (3-(3-nitrophenyl)prop-2-yn-1-yl)carbamate (5.00 g, 18.1 mmol, 1 eq) and NH4Cl (387 mg, 7.24 mmol, 4 eq) in EtOH (20 mL) and H2O (40 mL) was added Fe (3.03 g, 54.3 mmol, 3 eq) in portions at 80 °C. The mixture was stirred at 80 °C for 3 hr. TLC showed the reaction was completed. The mixture was filtered and concentrated.
- Step 3 tert-Butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenyl)prop-2-yn-1-yl)carbamate [00607] To the solution of tert-butyl(3-(3-aminophenyl)prop-2-yn-1-yl)carbamate (1.04 g, 4.21 mmol, 1.5 eq) and 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (0.8 g, 2.81 mmol, 1 eq), t-AmylOH (12 mL) was added Cs 2 CO 3 (1.83 g, 5.62 mmol, 2 eq), XPhos (134 mg, 281 ⁇ mol, 0.1
- Step 4 3-((3-(3-Aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide [00608] To the solution of tert-butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)carbamate (0.03 g, 60.7 ⁇ mol, 1 eq) in EA (1 mL) was added HCl/EA (1 mL, 4 M from WuXi EHS).
- Step 2 tert-Butyl (4-(3-aminophenyl)but-3-yn-1-yl)carbamate
- tert-butyl (4-(3-nitrophenyl)but-3-yn-1-yl)carbamate 1.7 g, 5.86 mmol, 1 eq
- NH 4 Cl 1.57 g, 73.25 mmol, 5 eq
- EtOH 20 mL
- H 2 O 10 mL
- Fe 981.04 mg, 17.57 mmol, 3 eq
- Step 4 3-((3-(4-Aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide [00612] To a solution of tert-butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)but-3-yn-1-yl)carbamate (80 mg, 157.29 ⁇ mol, 1 eq) in HCl/MeOH (4M, 5 mL, 127.15 eq) was stirred at 25 °C for 1 hr under N 2 atmosphere.
- Example 8 (Compound 11) 3-((3-(4-Acrylamidobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- Step 1 3-((3-(4-Acrylamidobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide
- [00618] To a solution of 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (30 mg, 66.10 ⁇ mol, 90% purity, 1 eq) in DCM (1
- Example 10 3-((3-(4-(But-2-ynamido)but-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- Step 1 3-((3-(4-(But-2-ynamido)but-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- [00622] To a solution of 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (31.07 mg, 68.45 ⁇ mol, 90% purity, 1
- Step 2 (S)-6-Ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1-yl)phenyl)amino)- 5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
- (S)-tert-butyl (1-((3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)amino)-1-oxopropan-2-yl)(methyl)carbamate (180 mg, 310.51 ⁇ mol, 1 eq) in HCl/EtOAc (4 M, 77.63 ⁇ L, 1 eq) was stirred at 25 °C for 1 h.
- Step 2 tert-Butyl (3-((4-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)pyridin-2-yl)amino)propyl)carbamate
- Step 4 3-((2-((3-Acrylamidopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- Step 3 2-(3-Bromo-5-methoxyphenyl)acetonitrile
- Step 6 3-((3-(Cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide [00649] To a solution of 2-(3-amino-5-methoxyphenyl)acetonitrile (200 mg, 1.23 mmol, 1 eq), 3- chloro-6-ethyl-5-(tetrahydropyran-4-ylamino)pyrazine-2-carboxamide (351.12 mg, 1.23 mmol, 1 eq), t- AmylOH (5 mL) was added Xantphos (71.35 mg, 123.31 ⁇ mol, 0.1 eq), Cs 2 CO 3 (1.81 g, 5.55 mmol, 4.5 eq) and Xantphos Pd G4 (106.11 mg, 123.31 ⁇ mol, 0.1 eq
- Step 7 3-((3-(2-Aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide 100 mg, 243.62 ⁇ mol, 1 eq
- NH 3 .H 2 O 121.97 mg, 1.22 mmol, 134.03 ⁇ L, 35% purity, 5 eq
- Raney-Ni 20.87 mg, 243.62 ⁇ mol, 1 eq
- Example 18 3-((3-(2-(4-Acrylamidobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 1 tert-Butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-4-oxobutyl)carbamate [00651] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Example 19 3-((3-(2-(3-Acrylamidopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 1 tert-Butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)carbamate [00654] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Example 20 6-Ethyl-3-((3-methoxy-5-(2-(3-propiolamidopropanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 1 6-Ethyl-3-((3-methoxy-5-(2-(3-propiolamidopropanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
- Example 22 6-Ethyl-3-((3-methoxy-5-(2-(3-(N-methylacrylamido)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 1 tert-Butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)(methyl)carbamate [00661]
- Step 2 (S)-6-Ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)pyrazine-2- carboxamide [00665] To the solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (130 mg, 259.69 ⁇ mol, 1 eq) and HCl/EA (259.69 ⁇ mol, 20 mL, 1 eq) was stirred at 25 °C for 1 h.
- Step 3 (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
- (E)-4-(dimethylamino)but-2-enoic acid 49.63 mg, 299.65 ⁇ mol, 1.5 eq, HCl
- BOP 132.53 mg, 299.65 ⁇ mol, 1.5 eq
- DIPEA 129.09 mg, 998.82 ⁇ mol, 173.98 ⁇ L, 5 eq
- Example 24 ((Compound 120) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methoxypyrazine-2-carboxamide Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methoxypyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate.
- the aqueous phase was extracted with ethyl acetate (20 mL*3).
- the combined organic phase was washed with saturated brine (30 mL*1), dried with anhydrous Na 2 SO 4, filtered and concentrated in vacuum.
- Step 2 (S)-6-ethyl-5-methoxy-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide.
- S tert-butyl
- Step 3 (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methoxypyrazine-2-carboxamide
- (S)-6-ethyl-5-methoxy-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide 60 mg, 139.37 ⁇ mol, 1 eq)
- BOP 92.46 mg, 209.06 ⁇ mol, 1.5 eq
- DIPEA 144.10 mg, 1.11 mmol, 194.21 ⁇ L, 8 eq
- Step 2 (S)-6-ethyl-5-(methylamino)-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide [00671] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(methylamino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (240 mg, 453.15 ⁇ mol, 1 eq) in HCl/EtOAc (4 M, 4.80 mL, 42.37 eq).
- Example 27 (Compound 124) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropylamino)pyrazine-2-carboxamide
- Example 28 (Compound 122) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(pentan-3-ylamino)pyrazine-2- carboxamide
- Step 1 tert-butyl N-[(1S)-2-[3-[3-[[3-carbamoyl-5-ethyl-6-(1-ethylpropylamino) pyrazin-2- yl]amino]phenoxy]propylamino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate [00674]
- Step 3 3-[3-[3-[[(2S)-2-[[(E)-4-(dimethylamino)but-2-enoyl]-methyl-amino] propanoyl]amino]propoxy]anilino]-6-ethyl-5-(1-ethylpropylamino)pyrazine-2-carboxamide [00676] To a mixture of 6-ethyl-5-(1-ethylpropylamino)-3-[3-[3-[[(2S)-2-(methylamino)propanoyl] amino]pro poxy]anilino]pyrazine-2-carboxamide (150 mg, 308.88 ⁇ mol, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid (76.73 mg, 463.32 ⁇ mol, 1.5 eq, HCl) in DMF (1.5 mL) was added BOP (204.92 mg, 463.3
- Example 31 (Compound 126) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
- Step 1 tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate [00678] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-y
- Step 2 (S)-6-ethyl-5-methyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)pyrazine-2-carboxamide [00679] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (110 mg, 181.69 ⁇ mol, 85% purity, 1 eq) in MeOH (1 mL) was added HCl/MeOH (4 M, 1 mL) in one portion at 25 °C under N2.
- Step 3 (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide [00680] To a mixture of (S)-6-ethyl-5-methyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)pyrazine-2-carboxamide (100 mg, 241.25 ⁇ mol, N/A purity, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid; hydrochloride (59.93 mg, 361.88 ⁇ mol, N/A purity, 1.5 eq) in DMF (1 mL) was added BOP (160.05 mg, 361.88 ⁇
- Step 3 (S,E)-5-cyclopropyl-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
- Step 2 tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl) carbamate [00689] A mixture of 3-((3-(3-aminopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (88 mg, 227.72 ⁇ mol, 1 eq) and (2S)-2-[tert- butoxycarbonyl(methyl)amino]propanoic acid (69.42 mg, 341.57 ⁇ mol, 1.5 eq) in DMF (3 mL) was added BOP (151.07 mg, 341.57 ⁇ mol, 1.5 eq) and
- Step 3 (S)-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
- Step 4 (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide [00691] A mixture of (S)-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (80 mg, 169.65 ⁇ mol, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid (56.19 mg, 339.31 ⁇ mol, 2 eq, HCl) in DMF (4 mL) was added BOP (112.55 mg, 254.48 ⁇ mol, 1.5 e
- Step 2 (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-3-methylbutanamido)ethyl)- 5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide [00693] To a solution of (S)-6-ethyl-3-((3-methoxy-5-(2-(3-methyl-2- (methylamino)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (140 mg, 265.32 ⁇ mol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (87.88 mg, 530.65 ⁇ mol, 2 eq
- Example 40 (Compound 132) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- Step 1 tert-butyl (3-(3-((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate [00694] [0010] To a mixture of tert-butyl (3-(3-((5-bromo-3-carbamoyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy
- Step 1 tert-butyl (3-(3-((3-carbamoyl-5-cyclopropyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate [00699] To a mixture of tert-butyl (3-(3-((5-bromo-3-carbamoyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)carbamate (270 mg, 477.49 ⁇ mol, 1 eq) and cyclopropylboronic acid (410.15 mg, 4.77 mmol, 10 eq) in DMA (2 mL) and H 2 O (0.5 mL) was added K 2 CO 3 (197.98 mg, 1.43 mmol, 3 eq) and Pd(dppf)C
- Step 2 3-((3-(3-aminopropoxy)phenyl)amino)-6-cyclopropyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
- tert-butyl N-[3-[3-[[3-carbamoyl-5-cyclopropyl-6-(tetrahydropyran-4- ylamino)pyrazin-2-yl]amino]phenoxy]propyl]carbamate 200 mg, 379.78 ⁇ mol, 1 eq
- DCM 10 mL
- TFA 15.40 g, 135.06 mmol, 10 mL, 355.63 eq
- Step 2 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
- Step 3 tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
- a mixture of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (420 mg, 1.09 mmol, 1.0 eq), N-(tert-butoxycarbonyl)-N-methyl-L- alanine (266.42 mg, 1.31 mmol, 1.2 eq), DIPEA (1.13 g, 8.74 mmol, 8.0 eq) and BOP (724.
- Step 3 (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide [00713] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (230 mg, 556.21 ⁇ mol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (138.18 mg, 834.31 ⁇ mol, 1.5 eq), BOP (369.00 mg, 834.31 ⁇ mol, 1.5 eq)
- Step 2 (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
- Step 3 (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide [00716] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (300 mg, 730.80 ⁇ mol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (181.55 mg, 1.10 mmol, 1.5 eq) BOP (484.83 mg, 1.10 mmol, 1.5 eq) in DMF (4 mL) at
- Step 2 (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5-(pyrrolidin-1- yl)pyrazine-2-carboxamide [00723] To tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(pyrrolidin-1-yl)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (260 mg, 456.39 ⁇ mol, 1 eq) was added HCl/MeOH (4 M, 50 mL).
- Step 2 tert-butyl (3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)carbamate [00726] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (1 g, 2.38 mmol, 1 eq), 2,4,6-trimethyl-1,3,5,2,4,6-trioxatriborinane (1.49 g, 11.91 mmol, 5 eq) in DMA(12 mL) and H2O(3 mL), K2CO3 (987.41 mg, 7.14 mmol, 3 eq) and Pd(dppf)Cl2 (174.26 mg, 238.15 ⁇ mol, 0.1 eq) was added, the mixture was stirred at 100 °C for 10 hours
Abstract
Disclosed herein are heterocyclic compounds that inhibit the activity of FLT3. Also described are specific irreversible inhibitors of FLT3. Also disclosed are pharmaceutical compositions that include the compounds. Methods of using the FLT3 inhibitors are disclosed, alone or in combination with other therapeutic agents, for the treatment of proliferative diseases or conditions, including hematological malignancies and other diseases or conditions dependent on FLT3 activity.
Description
PYRAZINE COMPOUNDS AS IRREVERSIBLE INHIBITORS OF FLT3 CROSS-REFERENCE [0001] The present application claims the benefit of U.S. provisional application no.63/236,659, filed August 24, 2021, U.S. provisional application no. 63/295,494, filed December 30, 2021, U.S. provisional application no. 63/316,939, filed March 4, 2022, and U.S. provisional application no. 63/364,860, filed May 17, 2022, the contents of which are hereby incorporated by reference in their entirety. FIELD [0002] Described herein are compounds, methods of making such compounds, pharmaceutical compositions, and medicaments containing such compounds, and methods of using such compounds and compositions to inhibit the activity of FLT3. BACKGROUND [0003] FMS-like tyrosine kinase 3 (FLT3) is a receptor tyrosine kinase that is expressed on normal hematopoietic stem/progenitor cells. Upon its activation by the FLT3 ligand (FL), FLT3 dimerizes and induces many signaling pathways related to hematopoietic cell survival and proliferation. [0004] FLT3 is also often overexpressed in many acute leukemia cells, and mutation of the FLT3 gene is the most frequent generic alteration in acute myeloid leukemia. Genetic mutation of the FLT3 gene is identified in approximately one-third of newly diagnosed AML adult patients (Papaemmanuil et al., 2016, N Engl J Med.374: 2209) where these mutations cause constitutive FLT3 activation. Genetic alterations of FLT3 have also been identified in other myeloid malignancies, such as myelodysplastic syndromes (MDS) and acute lymphocytic leukemia (ALL). Certain FLT3 mutations are either internal tandem duplicates (ITD) or point mutations in the tyrosine kinase domain. FLT3-ITD mutations are present in approximately 20% of AML patients, and point mutations are present in approximately 5%-10% of AML patients. Both mutations can constitutively activate FLT3 through ligand-independent autophosphorylation causing increased signaling and cellular proliferation, leading to survival of the leukemia cells (Kennedy et al., 2020, Front. Oncol. 10:612880; Kiyoi et al., 2020, Cancer Science 111:312). FLT3-ITD mutation is especially associated with a poor prognosis and high rate of relapse, and ITD mutations can be gained or lost during disease progression and/or relapse. For that reason, testing for FLT3-ITD in patients with AML is recommended by both the European Leukemia Net and Cancer Network Guidelines. [0005] Early studied FLT3 inhibitors, referred to as first-generation FLT3 inhibitors, included multi- kinase inhibitors sorafenib, midostaurin, lestaurtinib, sunitinib, and tandutinib. These first-generation inhibitors lacked efficacy as a monotherapy, most likely due in part to their non-specific effects. While many of these first generation inhibitors have been abandoned as therapeutic agents for AML as monotherapy or in combination with chemotherapy, midostaurin (Rydapt) in combination with chemotherapy received FDA approval in 2017 for the adults with newly diagnosed FTL3-mutated AML.
[0006] Second-generation FLT3 inhibitors have greater specificity for FLT3 and are more potent. Second generation inhibitors include gilteritinib, crenolanib, and quizartinib. Gilteritinib and crenolanib are both Type I inhibitors, meaning that they can bind to both the inactive and active conformations of FLT3, while quizartinib is a Type II inhibitor that can only bind to the inactive conformation. In 2018, the FDA approved gilteritinib for relapsed or refractory AML with patients with FLT3 mutation. In a Phase III trial studying the effect of quizartinib in combination with induction or consolidation chemotherapy (QuANTUM-R) in patients with relapsed or refractory FLT3-ITD AML, quizartinib exhibited a survival benefit and a manageable safety profile (Cortes et al., 2019, Lancet Oncol., 20: 984). Currently, crenolanib is being studied in a Phase III clinical trial for the treatment of relapsed or refractory AML in patients with an FLT3 mutation. [0007] An additional inhibitor of FLT3 includes the covalently-binding FLT3 inhibitor FF-10101, which has demonstrated activity against quizartinib-resistant AML (Yamaura et al., 2018, Blood, 131: 426) and is currently being studied in clinical trials for relapsed or refractory hematological malignancies, including AML. FF-10101 and other N-phenylpyrimidine-2-amine compounds are described in PCT Application WO 2013/157540 and U.S. Patent No.9,145,415 assigned to Fujifilm Corporation. PCT Application WO 2015/056683 and U.S. Patent No.9,701,644, also assigned to Fujifilm Corporation, describe crystalline forms of FF-10101. Additional patents and patent applications assigned to Fujifilm Corporation that describe FF-10101 and the use of FF-10101 for certain types of cancer include PCT Applications WO 2016/027904; WO 2020/075838; WO 2020/175629; and U.S. Patent No.9,987,278. [0008] Hanmi Pharmaceutical. Co., Ltd describe pyrimidine-containing compounds and the use of these compounds in FLT3-mutated cancers in PCT Applications WO 2020/022600; WO 2020/171646; WO 2020/171649; and, WO 2020/262974. The pyrimidine-containing FLT3 inhibitor HM43239 is currently being studied in a Phase 1/2 clinical trial for patients with relapsed or refractory resistant AML (Daver et al.2019, Blood, 134: 1331). [0009] Genosco and Oscotec, Inc. describe pyridopyrimidine compounds and their use in the treatment of hematological malignancies in PCT Application WO 2013/142382 and U.S. Patent No. 8,877,763. Crystal forms of the specific FLT3 inhibitor G-749 are described in WO 2020/040467 assigned to Oscotec, Inc. and oral pharmaceutical compositions of G-749 are described in WO 2020/159117 also assigned to Oscotec, Inc. [0010] Biochemically, these inhibitors are reported to block auto-phosphorylation of FLT3 at TYR- 589/591 and downstream signaling mediators signal transducer and activator of transcription 5 (STAT5) and extracellular-signal related kinase (ERK) (Wang et al., 2021, J. Med. Chem. 64(8):4870-4890. Resistance to FLT3 inhibitors has been reported in the clinic through secondary mutations in FLT3 including mutations in the tyrosine kinase domain in prior ITD-only mutant tumors (Heidel et al., 2006, Blood 107(1):293-300, Smith et al., 2012, Nature 485(7397):260-263).
[0011] Despite research in this area, there is still a need to deliver effective compounds for the inhibition of FLT3. Therefore, the object of the present invention is to provide inhibitors of FLT3, pharmaceutical compositions thereof, and methods for the inhibition of FLT3. Also of key importance is to develop inhibitors that will overcome the known resistance mechanisms of co-mutations ITD with XYZ that re- awaken the autophosphorylation capabilities of FLT3. SUMMARY [0012] In one aspect, described herein are inhibitors of FLT3. Also described herein are specific heterocyclic inhibitors of FLT3. In some embodiments, the inhibitors of FLT3 are irreversible inhibitors. In some embodiments, the inhibitors of FLT3 are reversible inhibitors. [0013] In another aspect, described herein are methods for synthesizing such irreversible inhibitors, methods for using such irreversible inhibitors in the treatment of diseases (including diseases wherein inhibition of FLT3 provides therapeutic benefit to a patient having the disease). Further described are pharmaceutical compositions that comprise an inhibitor of FLT3 and one or more pharmaceutically acceptable carriers, excipients, or diluents. Also, described herein are compounds and methods of use thereof to inhibit FLT3. In certain embodiments, the compounds and pharmaceutical compositions described herein are used for the treatment of hematological malignancies, including but not limited to, acute myeloid leukemia. [0014] In some embodiments, provided herein are compounds according to Formula (I) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-; Y is absent, -C(R2eR2f), -O-, or -NR2g-;
L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; L2 is a single bond, -C(O)-L3-NR2b-, -S(O)-L3-NR2b-, -S(O)2-L3-NR2b-; L3 is substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, substituted or unsubstituted alkynyl, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; R5 is H, Cy, CN, halo, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino; Cy is substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl; wherein the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl- 3-[(1-oxo-2-propen-1-yl)amino]phenyl]amino]-2-pyrazinecarboxamide, or a stereoisomer or salt thereof.
[0015] In some embodiments, provided herein are compounds according to Formula (I) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-; Y is -C(R2eR2f), -O-, or -NR2g-; L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; L2 is a single bond, -C(O)-L3-NR2b-, -S(O)-L3-NR2b-, -S(O)2-L3-NR2b-; L3 is substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; Cy is substituted or unsubstituted cycloalkyl or substituted or unsubstituted heterocycloalkyl; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl; each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide;
each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl. [0016] In certain embodiments according to Formula (I) or any formula provided herein, the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl-3-[(1-oxo-2-propen-1- yl)amino]phenyl]amino]-2-pyrazinecarboxamide (CAS 1254050-92-4), or a stereoisomer or salt thereof. [0017] In some embodiments, provided herein is a compound according to Formula (IIa) or (IIb) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [0018] In some embodiments, provided herein is a compound according to Formula (IIIa) or (IIIb) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[0019] In some embodiments, provided herein is a compound according to Formula (P2-I) having the structure:
; or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [0020] In some embodiments, with respect to the compounds of any of the formulas described herein, R4 is -C(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)2-B-C(R6a)=C(R6b) -C(O)-R6c, -B-C(R6a)=C(R6b)-C(O)-R6c, -B-C(R6a)=C(R6b)-S(O)-R6c, -B- C(R6a)=C(R6b)-S(O)2-R6c, -B-C(R6a)=C(R6b)-P(O)-R6aR6b; or -B-C(R6a)=C(R6b)-P(O)-OR6aOR6b; B is substituted or unsubstituted C1-4 alkylene, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; and R6c is substituted or unsubstituted alkoxy, substituted or unsubstituted amino, substituted or unsubstituted heterocycloalkyl, having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In some embodiments, R4 is -CH2-CH=CH-C(O)-N(CH3)2. In some embodiments, R4 is -CH2-C≡CH-C(O)-N(CH3)2. [0021] Any combination of the groups described above for the various variables is contemplated herein. It is understood that substituents and substitution patterns on the compounds provided herein can be selected by one of ordinary skill in the art to provide compounds that are chemically stable and that can be synthesized by techniques known in the art, as well as those set forth herein. [0022] In some embodiments, provided herein are pharmaceutical compositions, which comprise a therapeutically effective amount of at least one of any of the compounds herein, or a pharmaceutically acceptable salt, pharmaceutically active metabolite, pharmaceutically acceptable prodrug, or pharmaceutically acceptable solvate thereof. In certain embodiments, pharmaceutical compositions provided herein further include a pharmaceutically acceptable carrier, excipient and/or diluent. [0023] Pharmaceutical compositions formulated for administration by an appropriate route and means containing effective concentrations of one or more of the compounds provided herein, or pharmaceutically effective derivatives thereof, that deliver amounts effective for the treatment, prevention, or amelioration of one or more symptoms of diseases, disorders or conditions that are modulated or otherwise affected by FLT3 activity, in which FLT3 activity is implicated, or are characterized by a mutation in the FLT3 gene, are provided. The effective amounts and concentrations are effective for ameliorating any of the symptoms of any of the diseases, disorders or conditions disclosed herein. [0024] In certain embodiments, provided herein is a pharmaceutical composition comprising: i) a pharmaceutically acceptable carrier, diluent, and/or excipient; and ii) one or more compounds provided herein.
[0025] In some embodiments, provided herein are pharmaceutical compositions comprising a therapeutically effective amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and a pharmaceutically acceptable carrier, excipient, or diluent. In some embodiments, the pharmaceutical composition comprising the compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, and rectal administration. [0026] In some embodiments, provided herein are methods for preventing, treating or ameliorating in a mammal a disease or condition that is related to the aberrant activity of FLT3, which comprises administering to the mammal an effective disease-treating or condition-treating amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. In other embodiments, provided herein are methods for preventing, treating or ameliorating in a mammal a disease or condition that is related to a mutation of the FLT3 gene, which comprises administering to the mammal an effective disease-treating or condition-treating amount of a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. In certain embodiments, the FLT3 mutation is an internal tandem mutation (FLT3-ITD). In certain embodiments, the FLT3 mutation is a point mutation in the tyrosine kinase domain (FLT3-TKD). [0027] In some embodiments, the disease or condition is a hematologic malignancy, including, but not limited to leukemia, lymphoma, or multiple myeloma. In certain embodiments, the disease or condition is a leukemia, including, but not limited to, acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), mast-cell leukemia (MCL) or myelodysplastic syndrome (MDS). [0028] In certain embodiments, the disease or condition is acute myeloid leukemia (AML). In certain embodiments, the AML is FLT3 mutation-positive. In certain embodiments, the AML is newly diagnosed. In certain embodiments, the AML is FLT3 mutation-positive and newly diagnosed. In certain embodiments, the AML is relapsed or refractory. In certain embodiments, the AML is relapsed or refractory and is FLT3 mutation-positive. In certain embodiments, the patient has an NPM1 mutation. [0029] In certain embodiments, the disease or condition is a lymphoma, including, but not limited to, non-Hodgkin’s lymphoma or Hodgkin’s lymphoma. In certain embodiments, the disease or condition is multiple myeloma. [0030] In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically salt thereof for use in therapy. In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb),
and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to the aberrant activity of a FLT3 in vivo. In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in therapy. In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I’) – (P5- Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to a mutation in the FLT3 gene in vivo. In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for therapy. In some embodiments, provided herein are compounds selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene. Useful diseases and conditions are described herein. [0031] In some embodiments, provided herein are pharmaceutical compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in therapy. In some embodiments, provided herein are pharmaceutical compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene. In some embodiments, provided herein are pharmaceutical compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for therapy. In some embodiments, provided herein are pharmaceutical compositions comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof for use in the manufacture of a medicament for the treatment of a disease or condition related to the aberrant activity of FLT3 or related to a mutation of the FLT3 gene in vivo. Useful diseases and conditions are described herein. [0032] In any of the aforementioned embodiments are some embodiments in which administration is enteral, parenteral, or both, and wherein (a) an effective amount of a provided compound is systemically administered to the mammal; (b) an effective amount of a provided compound is administered orally to the mammal; (c) an effective amount of a provided compound is intravenously administered to the mammal; (d) an effective amount of a provided compound is administered by inhalation; (e) an effective amount of a provided compound is administered by nasal administration; or (f) an effective amount of a provided compound is administered by injection to the mammal; (g) an effective amount of a provided
compound is administered topically (dermal) to the mammal; (h) an effective amount of a provided compound is administered by ophthalmic administration; or (i) an effective amount of a provided compound is administered rectally to the mammal. [0033] In any of the aforementioned embodiments are some embodiments comprising single administrations of an effective amount of a provided compound including some embodiments in which (i) a provided compound is administered once; (ii) a provided compound is administered to the mammal multiple times over the span of one day; (iii) continually; or (iv) continuously. [0034] In any of the aforementioned embodiments are some embodiments comprising multiple administrations of an effective amount of a provided compound, including some embodiments in which (i) a provided compound is administered in a single dose; (ii) the time between multiple administrations is every 6 hours; (iii) a provided compound is administered to the mammal every 8 hours. In some embodiments, the method comprises a drug holiday, wherein the administration of the compound is temporarily suspended or the dose of the compound being administered is temporarily reduced; at the end of the drug holiday, dosing of the compound is resumed. The length of the drug holiday can vary from 2 days to 1 year. [0035] In any of the aforementioned embodiments involving the treatment of proliferative disorders, including cancer, for example, a hematological cancer, are some embodiments comprising administering at least one additional agent selected from the group consisting of alemtuzumab, azacitine, bortezomib, decitabine, everolimus, malademetan, palbociclib, ponatinib, venetoclax, and vorinostat. In other embodiments, the treatment of proliferative disorders, including cancer, for example, a hematological cancer, comprise the administration of at least one additional active agent selected from arsenic trioxide, asparaginase (pegylated or non-), bevacizumab, cetuximab, platinum-based compounds such as cisplatin, cladribine, daunorubicin/doxorubicin/idarubicin, irinotecan, fludarabine, 5-fluorouracil, gemtuzumab, methotrexate, Paclitaxel™, taxol, temozolomide, thioguanine, or classes of drugs including hormones (an antiestrogen, an antiandrogen, or gonadotropin releasing hormone analogues), interferons such as alpha interferon, nitrogen mustards such as busulfan or melphalan or mechlorethamine, retinoids such as tretinoin, topoisomerase irreversible inhibitors such as irinotecan or topotecan, tyrosine kinase irreversible inhibitors such as gefinitinib or imatinib, or agents to treat signs or symptoms induced by such therapy including allopurinol, filgrastim, granisetron/ondansetron/palonosetron, dronabinol. [0036] In certain embodiments, provided herein are articles of manufacture including packaging material, a compound or composition thereof provided herein within the packaging material, and a label that indicates that the compound or composition is administered to treat a disease or condition. [0037] In some embodiments, the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are irreversible inhibitors of FLT3 activity. In certain embodiments, such irreversible inhibitors have an IC50 below 10 microM in enzyme assay. In some embodiments, a FLT3 inhibitor has an IC50 of less than 1 microM, and in some embodiments, less than 0.25 microM or even less than 0.025 microM.
[0038] Other objects, features, and advantages of the methods and compositions described herein will become apparent from the following detailed description. It should be understood, however, that the detailed description and the specific examples, while indicating specific embodiments, are given by way of illustration only, since various changes and modifications within the spirit and scope of the present disclosure will become apparent to those skilled in the art from this detailed description. The section headings used herein are for organizational purposes only and are not to be construed as limiting the subject matter described. All documents, or portions of documents, cited in the application including, but not limited to, patents, patent applications, articles, books, manuals, and treatises are hereby expressly incorporated by reference in their entirety for any purpose. DETAILED DESCRIPTION OF THE PREFERRED EMBODIMENTS Certain Terminology [0039] Unless defined otherwise, all technical and scientific terms used herein have the same meaning as is commonly understood by one of skill in the art to which the claimed subject matter belongs. In the event that there are a plurality of definitions for terms herein, those in this section prevail. Where reference is made to a URL or other such identifier or address, it is understood that such identifiers can change and particular information on the internet can come and go, but equivalent information can be found by searching the internet. Reference thereto evidences the availability and public dissemination of such information. [0040] It is to be understood that the foregoing general description and the following detailed description are exemplary and explanatory only and are not restrictive of any subject matter claimed. In this application, the use of the singular includes the plural unless specifically stated otherwise. It must be noted that, as used in the specification and the appended claims, the singular forms “a,” “an” and “the” include plural referents unless the context clearly dictates otherwise. Use of the term “including” as well as other forms, such as “include”, “includes,” and “included,” is not limiting. Definition of standard chemistry terms may be found in reference works, including Carey and Sundberg “ADVANCED ORGANIC CHEMISTRY 4TH ED.” Vols. A (2000) and B (2001), Plenum Press, New York. Unless otherwise indicated, conventional methods of mass spectroscopy, NMR, HPLC, protein chemistry, biochemistry, recombinant DNA techniques and pharmacology, within the skill of the art are employed. Unless specific definitions are provided, the nomenclature employed in connection with, and the laboratory procedures and techniques of, analytical chemistry, synthetic organic chemistry, and medicinal and pharmaceutical chemistry described herein are those known in the art. Standard techniques can be used for chemical syntheses, chemical analyses, pharmaceutical preparation, formulation, and delivery, and treatment of patients. Standard techniques can be used for recombinant DNA, oligonucleotide synthesis, and tissue culture and transformation (e.g., electroporation, lipofection). Reactions and purification techniques can be performed e.g., using kits of manufacturer’s specifications or as commonly accomplished in the art or as described herein. The foregoing techniques and procedures can be generally performed of conventional
methods well known in the art and as described in various general and more specific references that are cited and discussed throughout the present specification. [0041] It is to be understood that the methods and compositions described herein are not limited to the particular methodology, protocols, cell lines, constructs, and reagents described herein and as such may vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the methods and compositions described herein, which will be limited only by the appended claims. [0042] All publications and patents mentioned herein are incorporated herein by reference in their entirety for the purpose of describing and disclosing, for example, the constructs and methodologies that are described in the publications, which might be used in connection with the methods, compositions and compounds described herein. The publications discussed herein are provided solely for their disclosure prior to the filing date of the present application. Nothing herein is to be construed as an admission that the inventors described herein are not entitled to antedate such disclosure by virtue of prior invention or for any other reason. [0043] “Alkyl” refers to a straight or branched hydrocarbon chain radical consisting solely of carbon and hydrogen atoms, containing no unsaturation, having from one to fifteen carbon atoms (e.g., C1-C15 alkyl). In certain embodiments, an alkyl comprises one to thirteen carbon atoms (e.g., C1-C13 alkyl). In certain embodiments, an alkyl comprises one to eight carbon atoms (e.g., C1-C8 alkyl). In some embodiments, an alkyl comprises five to fifteen carbon atoms (e.g., C5-C15 alkyl). In certain embodiments, an alkyl comprises five to eight carbon atoms (e.g., C5-C8 alkyl). The alkyl is attached to the rest of the molecule by a single bond, for example, methyl (Me), ethyl (Et), n-propyl (n-pr), 1-methylethyl (iso-propyl or i-Pr), n-butyl (n-Bu), n-pentyl, 1,1-dimethylethyl (t-butyl, or t-Bu), 3-methylhexyl, 2-methylhexyl, and the like. Unless stated otherwise specifically in the specification, an alkyl group is optionally substituted as defined and described below and herein. [0044] The “alkyl” group could also be a “lower alkyl” having 1 to 6 carbon atoms. [0045] As used herein, C1-Cx includes C1-C2, C1-C3. .. C1-Cx. [0046] “Alkenyl” refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one double bond, and having from two to twelve carbon atoms. In certain embodiments, an alkenyl comprises two to eight carbon atoms. In some embodiments, an alkenyl comprises two to four carbon atoms. The alkenyl is attached to the rest of the molecule by a single bond, for example, ethenyl (i.e., vinyl), prop-1-enyl (i.e., allyl), but-1-enyl, pent-1-enyl, penta-1,4-dienyl, and the like. Unless stated otherwise specifically in the specification, an alkenyl group is optionally substituted as defined and described below and herein. [0047] “Alkynyl” refers to a straight or branched hydrocarbon chain radical group consisting solely of carbon and hydrogen atoms, containing at least one triple bond, having from two to twelve carbon atoms. In certain embodiments, an alkynyl comprises two to eight carbon atoms. In some embodiments, an alkynyl has two to four carbon atoms. The alkynyl is attached to the rest of the molecule by a single bond, for example, ethynyl, propynyl, butynyl, pentynyl, hexynyl, and the like. Unless stated otherwise
specifically in the specification, an alkynyl group is optionally substituted as defined and described below and herein. [0048] “Alkylene” or “alkylene chain” refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing no unsaturation and having from one to twelve carbon atoms, for example, methylene, ethylene, propylene, n-butylene, and the like. The alkylene chain is attached to the rest of the molecule through a single bond and to the radical group through a single bond. The points of attachment of the alkylene chain to the rest of the molecule and to the radical group can be through one carbon in the alkylene chain or through any two carbons within the chain. Unless stated otherwise specifically in the specification, an alkylene chain is optionally substituted as defined and described below and herein. [0049] “Alkenylene” or “alkenylene chain” refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing at least one double bond and having from two to twelve carbon atoms, for example, ethenylene, propenylene, n-butenylene, and the like. The alkenylene chain is attached to the rest of the molecule through a double bond or a single bond and to the radical group through a double bond or a single bond. The points of attachment of the alkenylene chain to the rest of the molecule and to the radical group can be through one carbon or any two carbons within the chain. Unless stated otherwise specifically in the specification, an alkenylene chain is optionally substituted as defined and described below and herein. [0050] “Alkynylene” or “alkynylene chain” refers to a straight or branched divalent hydrocarbon chain linking the rest of the molecule to a radical group, consisting solely of carbon and hydrogen, containing at least one triple bond and having from two to twelve carbon atoms, for example, ethyne, propyne, butyne, and the like. The alkenylene chain is attached to the rest of the molecule through a triple bond or a single bond and to the radical group through a triple bond or a single bond. The points of attachment of the alkynylene chain to the rest of the molecule and to the radical group can be through one carbon or any two carbons within the chain. Unless stated otherwise specifically in the specification, an alkynylene chain is optionally substituted as defined and described below and herein. [0051] “Aryl” refers to a radical derived from an aromatic monocyclic or multicyclic hydrocarbon ring system by removing a hydrogen atom from a ring carbon atom. The aromatic monocyclic or multicyclic hydrocarbon ring system contains only hydrogen and carbon from six to eighteen carbon atoms, where at least one of the rings in the ring system is fully unsaturated, i.e., it contains a cyclic, delocalized (4n+2) ^– electron system in accordance with the Hückel theory. Aryl groups include, but are not limited to, groups such as phenyl (Ph), fluorenyl, and naphthyl. Unless stated otherwise specifically in the specification, the term “aryl” or the prefix “ar-“ (such as in “aralkyl”) is meant to include aryl radicals optionally substituted as defined and described below and herein. [0052] “Aralkyl” refers to a radical of the formula -Rc-aryl where Rc is an alkylene chain as defined above, for example, benzyl, diphenylmethyl and the like. The alkylene chain part of the aralkyl radical is optionally substituted as described above for an alkylene chain. The aryl part of the aralkyl radical is optionally substituted as described above for an aryl group.
[0053] “Aralkenyl” refers to a radical of the formula –Rd-aryl where Rd is an alkenylene chain as defined above. The aryl part of the aralkenyl radical is optionally substituted as described above for an aryl group. The alkenylene chain part of the aralkenyl radical is optionally substituted as defined above for an alkenylene group. [0054] “Aralkynyl” refers to a radical of the formula -Re-aryl, where Re is an alkynylene chain as defined above. The aryl part of the aralkynyl radical is optionally substituted as described above for an aryl group. The alkynylene chain part of the aralkynyl radical is optionally substituted as defined above for an alkynylene chain. [0055] “Carbocyclyl” or “cycloalkyl” refers to a stable non-aromatic monocyclic or polycyclic hydrocarbon radical consisting solely of carbon and hydrogen atoms, which includes fused or bridged ring systems, having from three to fifteen carbon atoms. In certain embodiments, a carbocyclyl comprises three to ten carbon atoms. In some embodiments, a carbocyclyl comprises five to seven carbon atoms. The carbocyclyl is attached to the rest of the molecule by a single bond. Carbocyclyl is optionally saturated, (i.e., containing single C-C bonds only) or unsaturated (i.e., containing one or more double bonds or triple bonds.) A fully saturated carbocyclyl radical is also referred to as “cycloalkyl.” Examples of monocyclic cycloalkyls include, e.g., cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, cycloheptyl, and cyclooctyl. An unsaturated carbocyclyl is also referred to as “cycloalkenyl.” Examples of monocyclic cycloalkenyls include, e.g., cyclopentenyl, cyclohexenyl, cycloheptenyl, and cyclooctenyl. Polycyclic carbocyclyl radicals include, for example, adamantyl, norbornyl (i.e., bicyclo[2.2.1]heptanyl), norbornenyl, decalinyl, 7,7-dimethyl-bicyclo[2.2.1]heptanyl, and the like. Unless otherwise stated specifically in the specification, the term “carbocyclyl” is meant to include carbocyclyl radicals that are optionally substituted as defined and described below and herein. [0056] “Halo” or “halogen” refers to bromo, chloro, fluoro or iodo substituents. [0057] The terms “haloalkyl,” “haloalkenyl,” “haloalkynyl” and “haloalkoxy” include alkyl, alkenyl, alkynyl and alkoxy structures in which at least one hydrogen is replaced with a halogen atom. In certain embodiments in which two or more hydrogen atoms are replaced with halogen atoms, the halogen atoms are all the same as one another. In some embodiments in which two or more hydrogen atoms are replaced with halogen atoms, the halogen atoms are not all the same as one another. [0058] “Fluoroalkyl” refers to an alkyl radical, as defined above, that is substituted by one or more fluoro radicals, as defined above, for example, trifluoromethyl, difluoromethyl, 2,2,2-trifluoroethyl, 1-fluoromethyl-2-fluoroethyl, and the like. The alkyl part of the fluoroalkyl radical is optionally substituted as defined above for an alkyl group. [0059] As used herein, the term “non-aromatic heterocycle”, “heterocycloalkyl” or “heteroalicyclic” refers to a non-aromatic ring wherein one or more atoms forming the ring is a heteroatom. A “non- aromatic heterocycle” or “heterocycloalkyl” group refers to a cycloalkyl group that includes at least one heteroatom selected from nitrogen, oxygen and sulfur. The radicals may be fused with an aryl or heteroaryl. Heterocycloalkyl rings can be formed by three to 14 ring atoms, such as three, four, five, six, seven, eight, nine, or more than nine atoms. Heterocycloalkyl rings can be optionally substituted. In
certain embodiments, non-aromatic heterocycles contain one or more carbonyl or thiocarbonyl groups such as, for example, oxo- and thio-containing groups. Examples of heterocycloalkyls include, but are not limited to, lactams, lactones, cyclic imides, cyclic thioimides, cyclic carbamates, tetrahydrothiopyran, 4H- pyran, tetrahydropyran, piperidine, 1,3-dioxin, 1,3-dioxane, 1,4-dioxin, 1,4-dioxane, piperazine, 1,3- oxathiane, 1,4-oxathiin, 1,4-oxathiane, tetrahydro-1,4-thiazine, 2H-1,2-oxazine, maleimide, succinimide, barbituric acid, thiobarbituric acid, dioxopiperazine, hydantoin, dihydrouracil, morpholine, trioxane, hexahydro-1,3,5-triazine, tetrahydrothiophene, tetrahydrofuran, pyrroline, pyrrolidine, pyrrolidone, pyrrolidione, pyrazoline, pyrazolidine, imidazoline, imidazolidine, 1,3-dioxole, 1,3-dioxolane, 1,3- dithiole, 1,3-dithiolane, isoxazoline, isoxazolidine, oxazoline, oxazolidine, oxazolidinone, thiazoline, thiazolidine, and 1,3-oxathiolane. Illustrative examples of heterocycloalkyl groups, also referred to as non-aromatic heterocycles, include:
and the like. The term heteroalicyclic also includes all ring forms of the carbohydrates, including but not limited to the monosaccharides, the disaccharides and the oligosaccharides. Depending on the structure, a heterocycloalkyl group can be a monoradical or a diradical (i.e., a heterocycloalkylene group). [0060] “Heteroaryl” refers to a radical derived from a 3- to 18-membered aromatic ring radical that comprises two to seventeen carbon atoms and from one to six heteroatoms selected from nitrogen, oxygen and sulfur. As used herein, the heteroaryl radical is a monocyclic, bicyclic, tricyclic or tetracyclic ring system, wherein at least one of the rings in the ring system is fully unsaturated, i.e., it contains a cyclic, delocalized (4n+2) ^–electron system in accordance with the Hückel theory. Heteroaryl includes fused or bridged ring systems. In some embodiments, heteroaryl rings have five, six, seven, eight, nine, or more than nine ring atoms. The heteroatom(s) in the heteroaryl radical is optionally oxidized. One or more nitrogen atoms, if present, are optionally quaternized. The heteroaryl is attached to the rest of the molecule through any atom of the ring(s). Examples of heteroaryls include, but are not limited to, azepinyl, acridinyl, benzimidazolyl, benzindolyl, 1,3-benzodioxolyl, benzofuranyl, benzooxazolyl, benzo[d]thiazolyl, benzothiadiazolyl, benzo[b][1,4]dioxepinyl, benzo[b][1,4]oxazinyl, 1,4-benzodioxanyl, benzonaphthofuranyl, benzoxazolyl, benzodioxolyl, benzodioxinyl, benzopyranyl, benzopyranonyl, benzofuranyl, benzofuranonyl, benzothienyl (benzothiophenyl), benzothieno[3,2-d]pyrimidinyl,
benzotriazolyl, benzo[4,6]imidazo[1,2-a]pyridinyl, carbazolyl, cinnolinyl, cyclopenta[d]pyrimidinyl, 6,7-dihydro-5H-cyclopenta[4,5]thieno[2,3-d]pyrimidinyl, 5,6-dihydrobenzo[h]quinazolinyl, 5,6-dihydrobenzo[h]cinnolinyl, 6,7-dihydro-5H-benzo[6,7]cyclohepta[1,2-c]pyridazinyl, dibenzofuranyl, dibenzothiophenyl, furanyl, furanonyl, furo[3,2-c]pyridinyl, 5,6,7,8,9,10-hexahydrocycloocta[d]pyrimidinyl, 5,6,7,8,9,10-hexahydrocycloocta[d]pyridazinyl, 5,6,7,8,9,10-hexahydrocycloocta[d]pyridinyl,isothiazolyl, imidazolyl, indazolyl, indolyl, indazolyl, isoindolyl, indolinyl, isoindolinyl, isoquinolyl, indolizinyl, isoxazolyl, 5,8-methano-5,6,7,8-tetrahydroquinazolinyl, naphthyridinyl, 1,6-naphthyridinonyl, oxadiazolyl, 2-oxoazepinyl, oxazolyl, oxiranyl, 5,6,6a,7,8,9,10,10a-octahydrobenzo[h]quinazolinyl, 1-phenyl-1H-pyrrolyl, phenazinyl, phenothiazinyl, phenoxazinyl, phthalazinyl, pteridinyl, purinyl, pyrrolyl, pyrazolyl, pyrazolo[3,4-d]pyrimidinyl, pyridinyl, pyrido[3,2-d]pyrimidinyl, pyrido[3,4-d]pyrimidinyl, pyrazinyl, pyrimidinyl, pyridazinyl, pyrrolyl, quinazolinyl, quinoxalinyl, quinolinyl, isoquinolinyl, tetrahydroquinolinyl, 5,6,7,8-tetrahydroquinazolinyl, 5,6,7,8-tetrahydrobenzo[4,5]thieno[2,3-d]pyrimidinyl, 6,7,8,9-tetrahydro-5H-cyclohepta[4,5]thieno[2,3-d]pyrimidinyl, 5,6,7,8-tetrahydropyrido[4,5-c]pyridazinyl, thiazolyl, thiadiazolyl, triazolyl, tetrazolyl, triazinyl, thieno[2,3-d]pyrimidinyl, thieno[3,2-d]pyrimidinyl, thieno[2,3-c]pridinyl, and thiophenyl (i.e. thienyl). Unless stated otherwise specifically in the specification, the term “heteroaryl” is meant to include heteroaryl radicals as defined above which are optionally substituted as defined and described below and herein. [0061] “N-heteroaryl” refers to a heteroaryl radical as defined above containing at least one nitrogen and where the point of attachment of the heteroaryl radical to the rest of the molecule is through a nitrogen atom in the heteroaryl radical. An N-heteroaryl radical is optionally substituted as described above for heteroaryl radicals. [0062] “C-heteroaryl” refers to a heteroaryl radical as defined above and where the point of attachment of the heteroaryl radical to the rest of the molecule is through a carbon atom in the heteroaryl radical. A C-heteroaryl radical is optionally substituted as described above for heteroaryl radicals. [0063] “Epoxide” refers to a three-membered cyclic ether. The epoxide is optionally substituted as defined and described below and herein. [0064] “Heteroarylalkyl” refers to a radical of the formula –Rc-heteroaryl, where Rc is an alkylene chain as defined above. If the heteroaryl is a nitrogen-containing heteroaryl, the heteroaryl is optionally attached to the alkyl radical at the nitrogen atom. The alkylene chain of the heteroarylalkyl radical is optionally substituted as defined above for an alkylene chain. The heteroaryl part of the heteroarylalkyl radical is optionally substituted as defined above for a heteroaryl group. [0065] “Sulfanyl” refers to the -S- radical. [0066] “Sulfinyl” refers to the -S(=O)- radical. [0067] “Sulfonyl” refers to the -S(=O)2- radical. [0068] “Amino” refers to the –NH2 radical.
[0069] “Cyano” refers to the -CN radical. [0070] “Nitro” refers to the -NO2 radical. [0071] “Oxa” refers to the -O- radical. [0072] “Oxo” refers to the =O radical. [0073] “Imino” refers to the =NH radical. [0074] “Thioxo” refers to the =S radical. [0075] An “alkoxy” group refers to a (alkyl)O- group, where alkyl is as defined herein. [0076] An “aryloxy” group refers to an (aryl)O- group, where aryl is as defined herein. [0077] “Carbocyclylalkyl” means an alkyl radical, as defined herein, substituted with a carbocyclyl group. “Cycloalkylalkyl” means an alkyl radical, as defined herein, substituted with a cycloalkyl group. Non-limiting cycloalkylalkyl groups include cyclopropylmethyl, cyclobutylmethyl, cyclopentylmethyl, cyclohexylmethyl, and the like. [0078] As used herein, the terms “heteroalkyl,” “heteroalkenyl,” and “heteroalkynyl” include optionally substituted alkyl, alkenyl and alkynyl radicals in which one or more skeletal chain atoms is a heteroatom, e.g., oxygen, nitrogen, sulfur, silicon, phosphorus or combinations thereof. The heteroatom(s) may be placed at any interior position of the heteroalkyl group or at the position at which the heteroalkyl group is attached to the remainder of the molecule. Examples include, but are not limited to, -CH2-O-CH3, -CH2- CH2-O-CH3, -CH2-NH-CH3, -CH2-CH2-NH-CH3, -CH2-N(CH3)-CH3, -CH2-CH2-NH-CH3, -CH2-CH2- N(CH3)-CH3, -CH2-S-CH2-CH3, -CH2-CH2,-S(O)-CH3, -CH2-CH2-S(O)2-CH3, -CH=CH-O-CH3, - Si(CH3)3, -CH2-CH=N-OCH3, and –CH=CH-N(CH3)-CH3. In addition, up to two heteroatoms may be consecutive, such as, by way of example, -CH2-NH-OCH3 and –CH2-O-Si(CH3)3. [0079] The term “heteroatom” refers to an atom other than carbon or hydrogen. Heteroatoms are typically independently selected from among oxygen, sulfur, nitrogen, silicon and phosphorus, but are not limited to these atoms. In embodiments in which two or more heteroatoms are present, the two or more heteroatoms can all be the same as one another, or some or all of the two or more heteroatoms can each be different from the others. [0080] The term “bond,” “direct bond” or “single bond” refers to a chemical bond between two atoms, or two moieties when the atoms joined by the bond are considered to be part of larger substructure. [0081] An “isocyanato” group refers to a -NCO group. [0082] An “isothiocyanato” group refers to a -NCS group. [0083] The term “moiety” refers to a specific segment or functional group of a molecule. Chemical moieties are often recognized chemical entities embedded in or appended to a molecule. [0084] A “thioalkoxy” or “alkylthio” group refers to a –S-alkyl group. [0085] A “alkylthioalkyl” group refers to an alkyl group substituted with a –S-alkyl group. [0086] As used herein, the term “acyloxy” refers to a group of formula RC(=O)O-. [0087] “Carboxy” means a -C(O)OH radical. [0088] As used herein, the term “acetyl” refers to a group of formula -C(=O)CH3. [0089] “Acyl” refers to the group -C(O)R.
[0090] As used herein, the term “trihalomethanesulfonyl” refers to a group of formula X3CS(=O)2- where X is a halogen. [0091] “Cyanoalkyl” means an alkyl radical, as defined herein, substituted with at least one cyano group. [0092] As used herein, the term “N-sulfonamido” or “sulfonylamino” refers to a group of formula RS(=O)2NH-. [0093] As used herein, the term “O-carbamyl” refers to a group of formula -OC(=O)NR2. [0094] As used herein, the term “N-carbamyl” refers to a group of formula ROC(=O)NH-. [0095] As used herein, the term “O-thiocarbamyl” refers to a group of formula -OC(=S)NR2. [0096] As used herein, “N-thiocarbamyl” refers to a group of formula ROC(=S)NH-. [0097] As used herein, the term “C-amido” refers to a group of formula -C(=O)NR2. [0098] “Aminocarbonyl” refers to a -CONH2 radical. [0099] As used herein, the term “N-amido” refers to a group of formula RC(=O)NH-. [00100] “Hydroxyalkyl” refers to an alkyl radical, as defined herein, substituted with at least one hydroxy group. Non-limiting examples of a hydroxyalkyl include, but are not limited to, hydroxymethyl, 2- hydroxyethyl, 2-hydroxypropyl, 3-hydroxypropyl, 1-(hydroxymethyl)-2-methylpropyl, 2-hydroxybutyl, 3- hydroxybutyl, 4-hydroxybutyl, 2,3-dihydroxypropyl, 1-(hydroxymethyl)-2-hydroxyethyl, 2,3- dihydroxybutyl, 3,4-dihydroxybutyl and 2-(hydroxymethyl)-3-hydroxypropyl. [00101] “Alkoxyalkyl” refers to an alkyl radical, as defined herein, substituted with an alkoxy group, as defined herein. [00102] An “alkenyloxy” group refers to a (alkenyl)O- group, where alkenyl is as defined herein. [00103] The term “alkylamine” refers to the –N(alkyl)xHy group, where x and y are selected from among x=1, y=1 and x=2, y=0. When x=2, the alkyl groups, taken together with the N atom to which they are attached, can optionally form a cyclic ring system. [00104] “Alkylaminoalkyl” refers to an alkyl radical, as defined herein, substituted with an alkylamine, as defined herein. [00105] An “amide” is a chemical moiety with the formula -C(O)NHR or -NHC(O)R, where R is selected from among alkyl, cycloalkyl, aryl, heteroaryl (bonded through a ring carbon) and heteroalicyclic (bonded through a ring carbon). An amide moiety may form a linkage between an amino acid or a peptide molecule and a compound described herein, thereby forming a prodrug. Any amine, or carboxyl side chain on the compounds described herein can be amidified. The procedures and specific groups to make such amides are known to those of skill in the art and can readily be found in reference sources such as Greene and Wuts, Protective Groups in Organic Synthesis, 3rd Ed., John Wiley & Sons, New York, NY, 1999, which is incorporated herein by reference in its entirety. [00106] The term “ester” refers to a chemical moiety with formula -COOR, where R is selected from among alkyl, cycloalkyl, aryl, heteroaryl (bonded through a ring carbon) and heteroalicyclic (bonded through a ring carbon). Any hydroxy, or carboxyl side chain on the compounds described herein can be esterified. The procedures and specific groups to make such esters are known to those of skill in the art
and can readily be found in reference sources such as Greene and Wuts, Protective Groups in Organic Synthesis, 3rd Ed., John Wiley & Sons, New York, NY, 1999, which is incorporated herein by reference in its entirety. [00107] As used herein, the term “ring” refers to any covalently closed structure. Rings include, for example, carbocycles (e.g., aryls and cycloalkyls), heterocycles (e.g., heteroaryls and non-aromatic heterocycles), aromatics (e.g. aryls and heteroaryls), and non-aromatics (e.g., cycloalkyls and non- aromatic heterocycles). Rings can be optionally substituted. Rings can be monocyclic or polycyclic. [00108] As used herein, the term “ring system” refers to one, or more than one ring. [00109] The term “membered ring” can embrace any cyclic structure. The term “membered” is meant to denote the number of skeletal atoms that constitute the ring. Thus, for example, cyclohexyl, pyridine, pyran and thiopyran are 6-membered rings and cyclopentyl, pyrrole, furan, and thiophene are 5-membered rings. [00110] The term “fused” refers to structures in which two or more rings share one or more bonds. [00111] As described herein, compounds provided herein may be “optionally substituted”. In general, the term “substituted,” whether preceded by the term “optionally” or not, means that one or more hydrogens of a designated moiety are replaced with a suitable substituent. Unless otherwise indicated, an “optionally substituted” group may have a suitable substituent at each substitutable position of the group, and when more than one position in any given structure may be substituted with more than one substituent selected from a specified group, the substituent may be either the same or different at every position. Combinations of substituents provided herein are preferably those that result in the formation of stable or chemically feasible compounds. The term “stable,” as used herein, refers to compounds that are not substantially altered when subjected to conditions to allow for their production, detection, and, in certain embodiments, their recovery, purification, and use for one or more of the purposes disclosed herein. [00112] Suitable monovalent substituents on a substitutable carbon atom of an “optionally substituted” group are independently halogen; –(CH2)0–4R °; –(CH2)0–4OR °; -O(CH2)0-4Ro, –O–(CH2)0–4C(O)OR°; – (CH2)0–4CH(OR °)2; –(CH2)0–4SR°; –(CH2)0–4Ph, which may be substituted with R°; –(CH2)0–4O(CH2)0–1Ph which may be substituted with R°; –CH=CHPh, which may be substituted with R°; –(CH2)0–4O(CH2)0–1- pyridyl which may be substituted with R°; –NO2; –CN; –N3; -(CH2)0–4N(R °)2; –(CH2)0–4N(R °)C(O)R °; – N(R °)C(S)R °; –(CH2)0–4N(R °)C(O)NR °2; -N(R °)C(S)NR °2; –(CH2)0–4N(R °)C(O)OR °; – N(R °)N(R °)C(O)R °; -N(R °)N(R °)C(O)NR °2; -N(R °)N(R °)C(O)OR °; –(CH2)0–4C(O)R °; –C(S)R °; – (CH2)0–4C(O)OR °; –(CH2)0–4C(O)SR °; -(CH2)0–4C(O)OSiR °3; –(CH2)0–4OC(O)R °; –OC(O)(CH2)0–4SR–, ^SC(S)SR°; –(CH2)0–4SC(O)R °; –(CH2)0–4C(O)NR °2; –C(S)NR °2; –C(S)SR°; -(CH2)0– 4OC(O)NR °2; -C(O)N(OR °)R °; –C(O)C(O)R °; –C(O)CH2C(O)R °; –C(NOR °)R °; -(CH2)0–4SSR °; – (CH2)0–4S(O)2R °; –(CH2)0–4S(O)2OR °; –(CH2)0–4OS(O)2R °; –S(O)2NR °2; -(CH2)0– 4S(O)R °; -N(R °)S(O)2NR °2; –N(R °)S(O)2R °; –N(OR °)R °; –C(NH)NR °2; – P(O)2R °; -P(O)R °2; -OP(O)R °2; –OP(O)(OR °)2; SiR °3; –(C1–4 straight or branched alkylene)O–N(R °)2; or –(C1–4 straight or branched alkylene)C(O)O–N(R °)2, wherein each R ° may be substituted as defined below
and is independently hydrogen, C1–6 aliphatic, –CH2Ph, –O(CH2)0–1Ph, -CH2-(5-6 membered heteroaryl ring), or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the definition above, two independent occurrences of R ^, taken together with their intervening atom(s), form a 3–12–membered saturated, partially unsaturated, or aryl mono– or bicyclic ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, which may be substituted as defined below. [00113] Suitable monovalent substituents on R ^ (or the ring formed by taking two independent occurrences of R ^ together with their intervening atoms), are independently halogen, –(CH2)0–2R •, – (haloR •), –(CH2)0–2OH, –(CH2)0–2OR •, –(CH2)0–2CH(OR •)2; -O(haloR •), –CN, –N3, –(CH2)0–2C(O)R •, – (CH2)0–2C(O)OH, –(CH2)0–2C(O)OR •, –(CH2)0–2SR •, –(CH2)0–2SH, –(CH2)0–2NH2, –(CH2)0–2NHR •, – (CH2)0–2NR 2, –NO2, –SiR • 3, –OSiR • 3, -C(O)SR • , –(C1–4 straight or branched alkylene)C(O)OR •, or – SSR • wherein each R • is unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently selected from C1–4 aliphatic, –CH2Ph, –O(CH2)0–1Ph, or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. Suitable divalent substituents on a saturated carbon atom of R ^ include =O and =S. [00114] Suitable divalent substituents on a saturated carbon atom of an “optionally substituted” group include the following: =O, =S, =NNR* 2, =NNHC(O)R*, =NNHC(O)OR*, =NNHS(O)2R*, =NR*, =NOR*, –O(C(R* * 2))2–3O–, or –S(C(R 2))2–3S–, wherein each independent occurrence of R* is selected from hydrogen, C1–6 aliphatic which may be substituted as defined below, or an unsubstituted 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. Suitable divalent substituents that are bound to vicinal substitutable carbons of an “optionally substituted” group include: –O(CR* 2)2–3O–, wherein each independent occurrence of R* is selected from hydrogen, C1–6 aliphatic which may be substituted as defined below, or an unsubstituted 5– 6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. [00115] Suitable substituents on the aliphatic group of R* include halogen, –R •, -(haloR •), -OH, –OR •, – O(haloR •), –CN, –C(O)OH, –C(O)OR •, –NH2, –NHR •, –NR •2, or –NO2, wherein each R • is unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C1–4 aliphatic, –CH2Ph, –O(CH2)0–1Ph, or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. [00116] Suitable substituents on a substitutable nitrogen of an “optionally substituted” group include –R†, -NR^2, -C(O)R†, -C(O)OR\ -C(O)C(O)R\ -C(O)CH2C(O)R\ -S(O)2R\ -S(O)2NR 2, -C(S)NR†2, - C(NH)NR†2, or –N(R†)S(O)2R†; wherein each R† is independently hydrogen, C1–6 aliphatic which may be substituted as defined below, unsubstituted –OPh, or an unsubstituted 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur, or, notwithstanding the definition above, two independent occurrences of R†, taken together with their intervening atom(s) form an unsubstituted 3–12–membered saturated, partially unsaturated, or aryl mono– or bicyclic ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur.
[00117] Suitable substituents on the aliphatic group of R† are independently halogen, –R •, -(haloR •), – OH, –OR •, –O(haloR •), –CN, –C(O)OH, –C(O)OR •, –NH2, –NHR •, –NR •2, or -NO2, wherein each R • is unsubstituted or where preceded by “halo” is substituted only with one or more halogens, and is independently C1–4 aliphatic, –CH2Ph, –O(CH2)0–1Ph, or a 5–6–membered saturated, partially unsaturated, or aryl ring having 0–4 heteroatoms independently selected from nitrogen, oxygen, or sulfur. [00118] The term “nucleophile” or “nucleophilic” refers to an electron rich compound, or moiety thereof. [00119] The term “electrophile”, or “electrophilic” refers to an electron poor or electron deficient molecule, or moiety thereof. Examples of electrophiles include, but in no way are limited to, Michael acceptor moieties. [00120] The term “acceptable” or “pharmaceutically acceptable”, with respect to a formulation, composition or ingredient, as used herein, means having no persistent detrimental effect on the general health of the subject being treated or does not abrogate the biological activity or properties of the compound, and is relatively nontoxic. [00121] As used herein, “amelioration” of the symptoms of a particular disease, disorder or condition by administration of a particular compound or pharmaceutical composition refers to any lessening of severity, delay in onset, slowing of progression, or shortening of duration, whether permanent or temporary, lasting or transient that can be attributed to or associated with administration of the compound or composition. [00122] “Bioavailability” refers to the percentage of the weight of compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) dosed that is delivered into the general circulation of the animal or human being studied. The total exposure (AUC(0-∞)) of a drug when administered intravenously is usually defined as 100% bioavailable (F%). “Oral bioavailability” refers to the extent to which compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are absorbed into the general circulation when the pharmaceutical composition is taken orally as compared to intravenous injection. [00123] “Blood plasma concentration” refers to the concentration of compounds disclosed herein, such as, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in the plasma component of blood of a subject. It is understood that the plasma concentration of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary significantly between subjects, due to variability with respect to metabolism and/or possible interactions with other therapeutic agents. In accordance with some embodiments disclosed herein, the blood plasma concentration of the compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary from subject to subject. Likewise, values such as maximum plasma concentration (Cmax) or time to reach maximum plasma concentration (Tmax), or total area under the plasma concentration time curve (AUC(0-∞)) may vary from subject to subject. Due to this
variability, the amount necessary to constitute “a therapeutically effective amount” of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may vary from subject to subject. [00124] The terms “co-administration” or the like, as used herein, are meant to encompass administration of the selected therapeutic agents to a single patient, and are intended to include treatment regimens in which the agents are administered by the same or different route of administration or at the same or different time. [00125] The terms “effective amount” or “therapeutically effective amount,” as used herein, refer to a sufficient amount of an agent or a compound being administered which will relieve to some extent one or more of the symptoms of the disease or condition being treated. The result can be reduction and/or alleviation of the signs, symptoms, or causes of a disease, or any other desired alteration of a biological system. For example, an “effective amount” for therapeutic uses is the amount of the composition including a compound as disclosed herein required to provide a clinically significant decrease in disease symptoms without undue adverse side effects. An appropriate “effective amount” in any individual case may be determined using techniques, such as a dose escalation study. The term “therapeutically effective amount” includes, for example, a prophylactically effective amount. An “effective amount” of a compound disclosed herein is an amount effective to achieve a desired pharmacologic effect or therapeutic improvement without undue adverse side effects. It is understood that “an effect amount” or “a therapeutically effective amount” can vary from subject to subject, due to variation in metabolism of the compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd), age, weight, general condition of the subject, the condition being treated, the severity of the condition being treated, and the judgment of the prescribing physician. By way of example only, therapeutically effective amounts may be determined by routine experimentation, including but not limited to a dose escalation clinical trial. [00126] The terms “enhance” or “enhancing” means to increase or prolong either in potency or duration a desired effect. By way of example, “enhancing” the effect of therapeutic agents refers to the ability to increase or prolong, either in potency or duration, the effect of therapeutic agents on during treatment of a disease, disorder or condition. An “enhancing-effective amount,” as used herein, refers to an amount adequate to enhance the effect of a therapeutic agent in the treatment of a disease, disorder or condition. When used in a patient, amounts effective for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient’s health status and response to the drugs, and the judgment of the treating physician. [00127] The term “identical,” as used herein, refers to two or more sequences or subsequences which are the same. In addition, the term “substantially identical,” as used herein, refers to two or more sequences which have a percentage of sequential units which are the same when compared and aligned for maximum correspondence over a comparison window, or designated region as measured using comparison algorithms or by manual alignment and visual inspection. By way of example only, two or more sequences may be “substantially identical” if the sequential units are about 60% identical, about 65%
identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region. Such percentages to describe the “percent identity” of two or more sequences. The identity of a sequence can exist over a region that is at least about 75-100 sequential units in length, over a region that is about 50 sequential units in length, or, where not specified, across the entire sequence. This definition also refers to the complement of a test sequence. By way of example only, two or more polypeptide sequences are identical when the amino acid residues are the same, while two or more polypeptide sequences are “substantially identical” if the amino acid residues are about 60% identical, about 65% identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region. The identity can exist over a region that is at least about 75-100 amino acids in length, over a region that is about 50 amino acids in length, or, where not specified, across the entire sequence of a polypeptide sequence. In addition, by way of example only, two or more polynucleotide sequences are identical when the nucleic acid residues are the same, while two or more polynucleotide sequences are “substantially identical” if the nucleic acid residues are about 60% identical, about 65% identical, about 70% identical, about 75% identical, about 80% identical, about 85% identical, about 90% identical, or about 95% identical over a specified region. The identity can exist over a region that is at least about 75-100 nucleic acids in length, over a region that is about 50 nucleic acids in length, or, where not specified, across the entire sequence of a polynucleotide sequence. [00128] The term “isolated,” as used herein, refers to separating and removing a component of interest from components not of interest. Isolated substances can be in either a dry or semi-dry state, or in solution, including but not limited to an aqueous solution. The isolated component can be in a homogeneous state or the isolated component can be a part of a pharmaceutical composition that comprises additional pharmaceutically acceptable carriers and/or excipients. By way of example only, nucleic acids or proteins are “isolated” when such nucleic acids or proteins are free of at least some of the cellular components with which it is associated in the natural state, or that the nucleic acid or protein has been concentrated to a level greater than the concentration of its in vivo or in vitro production. Also, by way of example, a gene is isolated when separated from open reading frames which flank the gene and encode a protein other than the gene of interest. [00129] A “metabolite” of a compound disclosed herein is a derivative of that compound that is formed when the compound is metabolized. The term “active metabolite” refers to a biologically active derivative of a compound that is formed when the compound is metabolized. The term “metabolized,” as used herein, refers to the sum of the processes (including, but not limited to, hydrolysis reactions and reactions catalyzed by enzymes, such as, oxidation reactions) by which a particular substance is changed by an organism. Thus, enzymes may produce specific structural alterations to a compound. For example, cytochrome P450 catalyzes a variety of oxidative and reductive reactions while uridine diphosphate glucuronyl transferases catalyze the transfer of an activated glucuronic-acid molecule to aromatic alcohols, aliphatic alcohols, carboxylic acids, amines and free sulfhydryl groups. Further information on metabolism may be obtained from The Pharmacological Basis of Therapeutics, 9th Edition, McGraw-Hill
(1996). Metabolites of the compounds disclosed herein can be identified either by administration of compounds to a host and analysis of tissue samples from the host, or by incubation of compounds with hepatic cells in vitro and analysis of the resulting compounds. Both methods are well known in the art. In some embodiments, metabolites of a compound are formed by oxidative processes and correspond to the corresponding hydroxy-containing compound. In some embodimets, a compound is metabolized to pharmacologically active metabolites. [00130] The term “modulate,” as used herein, means to interact with a target either directly or indirectly so as to alter the activity of the target, including, by way of example only, to enhance the activity of the target, to inhibit the activity of the target, to limit the activity of the target, or to extend the activity of the target. [00131] As used herein, the term “modulator” refers to a compound that alters an activity of a molecule. For example, a modulator can cause an increase or decrease in the magnitude of a certain activity of a molecule compared to the magnitude of the activity in the absence of the modulator. In certain embodiments, a modulator is an inhibitor, which decreases the magnitude of one or more activities of a molecule. In certain embodiments, an inhibitor completely prevents one or more activities of a molecule. In certain embodiments, a modulator is an activator, which increases the magnitude of at least one activity of a molecule. In certain embodiments the presence of a modulator results in an activity that does not occur in the absence of the modulator. [00132] The term “irreversible inhibitor,” as used herein, refers to a compound that, upon contact with a target protein (e.g., FLT3) causes the formation of a new covalent bond with or within the protein, whereby one or more of the target protein’s biological activities (e.g., phosphotransferase activity) is diminished or abolished notwithstanding the subsequent presence or absence of the irreversible inhibitor. In contrast, a reversible inhibitor compound upon contact with a target protein does not cause the formation of a new covalent bond with or within the protein and therefore can associate and dissociate from the target potein. [00133] The term “irreversible inhibitor of FLT3 protein-proten interaction” as used herein, refers to an inhibitor of FLT3 that can form a covalent bond with an amino acid residue of FLT3. In one embodiment, the irreversible inhibitor of FLT3 can form a covalent bond with a Cys residue of FLT3 ; in particular embodiments, the irreversible inhibitor can form a covalent bond with a Cys 12 residue (or a homolog thereof) of FLT3. [00134] The term “prophylactically effective amount,” as used herein, refers that amount of a composition applied to a patient that will relieve to some extent one or more of the symptoms of a disease, disease or condition being treated. In such prophylactic applications, such amounts may depend on the patient’s state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation, including, but not limited to, a dose escalation clinical trial. [00135] As used herein, the term “selective binding compound” refers to a compound that selectively binds to any portion of one or more target proteins.
[00136] As used herein, the term “selectively binds” refers to the ability of a selective binding compound to bind to a target protein, such as, for example, FLT3 , with greater affinity than it binds to a non-target protein. In certain embodiments, specific binding refers to binding to a target with an affinity that is at least 10, 50, 100, 250, 500, 1000 or more times greater than the affinity for a non-target. [00137] As used herein, the term “selective modulator” refers to a compound that selectively modulates a target activity relative to a non-target activity. In certain embodiments, specific modulater refers to modulating a target activity at least 10, 50, 100, 250, 500, 1000 times more than a non-target activity. [00138] The term “substantially purified,” as used herein, refers to a component of interest that may be substantially or essentially free of other components which normally accompany or interact with the component of interest prior to purification. By way of example only, a component of interest may be “substantially purified” when the preparation of the component of interest contains less than about 30%, less than about 25%, less than about 20%, less than about 15%, less than about 10%, less than about 5%, less than about 4%, less than about 3%, less than about 2%, or less than about l% (by dry weight) of contaminating components. Thus, a “substantially purified” component of interest may have a purity level of about 70%, about 75%, about 80%, about 85%, about 90%, about 95%, about 96%, about 97%, about 98%, about 99% or greater. [00139] The term “subject” or “patient” as used herein, refers to an animal which is the object of treatment, observation, or experiment. By way of example only, a subject may be, but is not limited to, a mammal including, but not limited to, a human. [00140] As used herein, the term “target activity” refers to a biological activity capable of being modulated by a selective modulator. Certain exemplary target activities include, but are not limited to, binding affinity, signal transduction, enzymatic activity, tumor growth, inflammation, or inflammation- related processes, and amelioration of one or more symptoms associated with a disease or condition. [00141] As used herein, the term “target protein” refers to a molecule or a portion of a protein capable of being bound by a selective binding compound. In certain embodiments, a target protein is FLT3. [00142] The terms “treat,” “treating” or “treatment”, as used herein, include alleviating, abating or ameliorating a disease or condition symptoms, preventing additional symptoms, ameliorating or preventing the underlying metabolic causes of symptoms, inhibiting the disease or condition, e.g., arresting the development of the disease or condition, relieving the disease or condition, causing regression of the disease or condition, relieving a condition caused by the disease or condition, or stopping the symptoms of the disease or condition. The terms “treat,” “treating” or “treatment”, include, but are not limited to, prophylactic and/or therapeutic treatments. [00143] As used herein, the term “FLT3” or “FLT3” refers to fms-like tyrosine kinase 3, gene or protein. Synonyms include CD135, CD135 antigen, fetal liver kinase 2, FL cytokine receptor, FLK-2, FLK2, FLT3_HUMAN, fms-related tyrosine kinase 3, growth factor receptor tyrosine kinase type III, receptor- type tyrosine-protein kinase FLT3, stem cell tyrosine kinase 1, STK-1, and STK1. Human sequences include NM_004119 and NM_004119.2 (mRNA), and NP_004110 and NP_004110.2 (protein). Mouse sequences include NM_010229 and NM_010229.2 (mRNA) and NP_034359 and NP_034359.2 (protein).
[00144] As used herein, the IC50 refers to an amount, concentration, or dosage of a particular test compound that achieves a 50% inhibition of a maximal response, such as inhibition of FLT3 , in an assay that measures such response. [00145] As used herein, EC50 refers to a dosage, concentration, or amount of a particular test compound that elicits a dose-dependent response at 50% of maximal expression of a particular response that is induced, provoked or potentiated by the particular test compound. [00146] Methods described herein include administering to a subject in need a composition containing a therapeutically effective amount of one or more FLT3 inhibitor compounds described herein. [00147] In some embodiments, methods described herein can be used to treat a cancer, e.g., B-cell proliferative disorders, which include, but are not limited to diffuse large B cell lymphoma, follicular lymphoma, chronic lymphocytic lymphoma, chronic lymphocytic leukemia, B-cell prolymphocytic leukemia, lymphoplasmacytic lymphoma/Waldenström macroglobulinemia, splenic marginal zone lymphoma, plasma cell myeloma, plasmacytoma, extranodal marginal zone B cell lymphoma, nodal marginal zone B cell lymphoma, mantle cell lymphoma, mediastinal (thymic) large B cell lymphoma, intravascular large B cell lymphoma, primary effusion lymphoma, burkitt lymphoma/leukemia, and lymphomatoid granulomatosis. [00148] Symptoms, diagnostic tests, and prognostic tests for each of the above-mentioned conditions are known in the art. See, e.g., Harrison’s Principles of Internal Medicine©,” 16th ed., 2004, The McGraw- Hill Companies, Inc. Dey et al. (2006), Cytojournal 3(24), and the “Revised European American Lymphoma” (REAL) classification system (see, e.g., the website maintained by the National Cancer Institute). [00149] A number of animal models of are useful for establishing a range of therapeutically effective doses of FLT3 inhibitor compounds for treating any of the foregoing diseases. [00150] Animal models for treatment of thromboembolic disorders are also known. [00151] The therapeutic efficacy of a provided compound for one of the foregoing diseases can be optimized during a course of treatment. For example, a subject being treated can undergo a diagnostic evaluation to correlate the relief of disease symptoms or pathologies to inhibition of in vivo FLT3 activity achieved by administering a given dose of a FLT3 inhibitor. Compounds [00152] In the following description of FLT3 inhibitor compounds suitable for use in the methods described herein, definitions of referred-to standard chemistry terms may be found in reference works (if not otherwise defined herein), including Carey and Sundberg “Advanced Organic Chemistry 4th Ed.” Vols. A (2000) and B (2001), Plenum Press, New York. Unless otherwise indicated, conventional methods of mass spectroscopy, NMR, HPLC, protein chemistry, biochemistry, recombinant DNA techniques and pharmacology, within the ordinary skill of the art are employed. Unless specific definitions are provided, the nomenclature employed in connection with, and the laboratory procedures and techniques of, analytical chemistry, synthetic organic chemistry, and medicinal and pharmaceutical
chemistry described herein are those known in the art. Standard techniques can be used for chemical syntheses, chemical analyses, pharmaceutical preparation, formulation, and delivery, and treatment of patients. [00153] FLT3 inhibitor compounds can be used for the manufacture of a medicament for treating any of the foregoing conditions (e.g., hematological malignancies). [00154] In some embodiments, the FLT3 inhibitor compound used for the methods described herein inhibits FLT3 activity with an in vitro IC50 of less than about 10 μM (e.g., less than about 1 μM, less than about 0.5 μM, less than about 0.4 μM, less than about 0.3 μM, less than about 0.1 μM, less than about 0.08 μM, less than about 0.06 μM, less than about 0.05 μM, less than about 0.04 μM, less than about 0.03 μM, less than about 0.02 μM, less than about 0.01 μM, less than about 0.008 μM, less than about 0.006 μM, less than about 0.005 μM, less than about 0.004 μM, less than about 0.003 μM, less than about 0.002 μM, less than about 0.001 μM, less than about 0.00099 μM, less than about 0.00098 μM, less than about 0.00097 μM, less than about 0.00096 μM, less than about 0.00095 μM, less than about 0.00094 μM, less than about 0.00093 μM, less than about 0.00092 μM, or less than about 0.00090 μM). In some embodiments, the FLT3 inhibitor is selective for FLT3. In some embodiments, the FLT3 inhibitor is selective for FLT3 over cKit. [00155] Also described herein are methods for synthesizing such irreversible inhibitors, methods for using such irreversible inhibitors in the treatment of diseases (including diseases wherein inhibition of FLT3 provides therapeutic benefit to a patient having the disease). Further described are pharmaceutical compositions that include an inhibitor of FLT3. [00156] Specifically described herein are irreversible inhibitors of FLT3 that form a covalent bond with a cysteine residue on FLT3. Further described herein are irreversible inhibitors of FLT3 that form a covalent bond with a Cys12 residue on FLT3. Irreversible inhibitor compounds described herein include a Michael acceptor moiety. Also described are pharmaceutical formulations that include an irreversible inhibitor of FLT3. [00157] Generally, a reversible or irreversible inhibitor compound of FLT3 used in the methods described herein is identified or characterized in an in vitro assay, e.g., an acellular biochemical assay or a cellular functional assay. Such assays are useful to determine an in vitro IC50 for a reversible or irreversible FLT3 inhibitor compound. [00158] Further, covalent complex formation between FLT3 and a candidate irreversible FLT3 inhibitor is a useful indicator of irreversible inhibition of FLT3 that can be readily determined by a number of methods known in the art (e.g., mass spectrometry). For example, some irreversible FLT3 -inhibitor compounds can form a covalent bond with Cys 12 of FLT3 GC12 (e.g., via a Michael reaction). See S. Xu et al. Angewandte Chemie International Ed. 57(6), 1601-1605 (2017) (incorporated by reference in its entirety). [00159] Described herein are compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd). Also described herein are pharmaceutically acceptable salts, pharmaceutically acceptable solvates, pharmaceutically active
metabolites, and pharmaceutically acceptable prodrugs of such compounds. Pharmaceutical compositions that include at least one such compound or a pharmaceutically acceptable salt, pharmaceutically acceptable solvate, pharmaceutically active metabolite or pharmaceutically acceptable prodrug of such compound, are provided. In some embodiments, when compounds disclosed herein contain an oxidizable nitrogen atom, the nitrogen atom can be converted to an N-oxide by methods well known in the art. In certain embodiments, isomers and chemically protected forms of compounds having a structure represented by any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are also provided. [00160] In some embodiments, provided herein are FLT3 irreversible inhibitors according to compounds of Formula (P-I). In some embodiments, provided herein is a compound according to Formula (P-I) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-; Y is absent, -C(R2eR2f), -O-, or -NR2g-; L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; L2 is a single bond, -C(O)-L3-NR2b-, -S(O)-L3-NR2b-, -S(O)2-L3-NR2b-; L3 is substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, substituted or unsubstituted alkynyl, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl;
each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; R5 is H, Cy, CN, halo, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino; Cy is substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl; wherein the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl- 3-[(1-oxo-2-propen-1-yl)amino]phenyl]amino]-2-pyrazinecarboxamide, or a stereoisomer or salt thereof. [00161] In some embodiments, provided herein is a compound according to Formula (P2-I) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00162] In certain embodiments, R5 is Cy. In certain embodiments, R5 is substituted or unsubstituted C1-6 alkyl. In certain embodiments, R5 is C1-6 alkyl, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C1-6 alkoxy. In certain embodiments, R5 is C1-6 alkyl, substituted with F, CN, OMe, or OEt. In certain embodiments, R5 is C1-6 alkoxy, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C1-6 alkoxy. In certain embodiments, R5 is C1-6 alkoxy, substituted with F, CN, OMe, or OEt. In certain embodiments, R5 is alkylamino, unsubstituted or substituted with halo, CN, OH,
substituted or unsubstituted C1-6 alkoxy. In certain embodiments, R5 is alkylamino, substituted with F, CN, OMe, or OEt. In certain embodiments, R5 is N(H)(Me), N(H)(Et), or N(H)(iPr). In certain embodiments, R5 is dialkylamino, unsubstituted or substituted with halo, CN, OH, substituted or unsubstituted C1-6 alkoxy. In certain embodiments, R5 is dialkylamino, substituted with F, CN, OMe, or OEt. [00163] In certain embodiments, R5 is N(Me)2. [00164] In certain embodiments, R5 is Cy. In certain embodiments, R5 is cyclopropyl, cyclobutyl or cyclopentyl. [00165] In certain embodiments, R1 is Me. In particular embodiments, R1 is Et. In certain embodiments, R7 is F, Cl, Me, Et, or OMe. In particular embodiments, R7 is H. [00166] In certain embodiments, R4 is -C(O)-CH=CH2. In particular embodiments, R4 is -C(O)-CH=CH- CH2-NMe2. [00167] In some embodiments, provided herein are FLT3 irreversible inhibitors according to compounds of Formula (I). In some embodiments, provided herein is a compound according to Formula (I) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-; Y is -C(R2eR2f), -O-, or -NR2g-; L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; L2 is a single bond, -C(O)-L3-NR2b-, -S(O)-L3-NR2b-, -S(O)2-L3-NR2b-;
L3 is substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; Cy is substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl; each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl. [00168] In some embodiments, provided herein is a compound according to Formula (Ia) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-; Y is -C(R2eR2f), -O-, or -NR2g-;
L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; Cy is substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl; each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl. [00169] In some embodiments, provided herein is a compound according to Formula (Ib) having the structure:
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N. X is a single bond, -O-, or -NR2a-;
L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; Cy is substituted or unsubstituted heterocycloalkyl; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl; R2a is H or C1-C4 alkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond (thereby forming a triple bond); R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, or substituted or unsubstituted heterocycloalkyl. [00170] In some embodiments, when X is -O-, or -NR2a-; then L1 is substituted or unsubstituted C2-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene. In some embodiments, when X is a single bond; then L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene. [00171] In some embodiments, with respect to the compounds of any of the formulas described herein, R4 is -C(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)2-B-C(R6a)=C(R6b) - C(O)-R6c, -B-C(R6a)=C(R6b)-C(O)-R6c, -B-C(R6a)=C(R6b)-S(O)-R6c, -B-C(R6a)=C(R6b)-S(O)2-R6c, -B- C(R6a)=C(R6b)-P(O)-R6aR6b; or -B-C(R6a)=C(R6b)-P(O)-OR6aOR6b; B is substituted or unsubstituted C1-4 alkylene, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; and R6c is substituted or unsubstituted alkoxy, substituted or unsubstituted amino, substituted or unsubstituted heterocycloalkyl, having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In some embodiments, R4 is -CH2-CH=CH-C(O)-N(CH3)2. In some embodiments, R4 is -CH2-C≡CH-C(O)- N(CH3)2. [00172] In certain embodiments, one of A1, A2, A3, and A4 is N. In certain embodiments, two of A1, A2, A3, and A4 are N. [00173] In certain embodiments, each of A1, A2, and A3 is independently –C(R7)=; and A4 is C(R7)= or N.
[00174] In certain embodiments, A4 is –N=. In certain embodiments, A4 is –C(R7)=; and R7 is H, alkyl, or alkoxy. In certain embodiments, A4 is –C(R7)=; and R7 is substituted or unsubstituted heterocycloalkyl. In certain embodiments, A4 is –C(R7)=; and R7 is substituted or unsubstituted pyrrolidinyl, or piperidinyl. In certain embodiments, A4 is –C(R7)=; and R7 is piperidinyl, unsubstituted or substituted with alkyl, or heterocycloalkyl. In certain embodiments, A3 is –C(R7)=; and R7 is H, alkyl, or alkoxy. [00175] In certain embodiments, Y is -C(R2eR2f)-. In certain embodiments, Y is -CH2-, -C(Me)H, CMe2, CHF, or CF2. In certain embodiments, Y is -O-. In certain embodiments, Y is -NR2g-. In certain embodiments, Y is -NMe-. In certain embodiments, Y is -NH-. [00176] In certain embodiments, each R2c and R2d is independently H or alkyl. In certain embodiments, each R2c and R2d is independently H or Me. In certain embodiments, R2c is H; and R2d is Me. In certain embodiments, R2c and R2d may join together to form a 4-6 membered heterocycloalkyl. In certain embodiments, each R2c and R2d is H. [00177] In certain embodiments, the compound is according to Formula (IIa) or (IIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00178] In certain embodiments, Cy is unsubstituted cycloalkyl. In certain embodiments, Cy is cycloalkyl, substituted with alkyl, or halo. In certain embodiments, Cy is cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, or cycloheptyl. [00179] In certain embodiments, Cy is unsubstituted heterocycloalkyl. In certain embodiments, Cy is heterocycloalkyl, substituted with alkyl, or halo. In certain embodiments, Cy is azetidinyl, azepinyl, pyrrolidinyl, piperidinyl, tetrahydrofuranyl, or tetrahydropyranyl. In certain embodiments, Cy is tetrahydropyranyl. [00180] In certain embodiments, Y-R5 is H, halo, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino, substituted or unsubstituted dialkylamino, heterocycloalkyl, substituted or unsubstituted phenyl, or substituted or unsubstituted heteroaryl. [00181] In certain embodiments, Y-R5 is H. In certain embodiments, Y-R5 is halo. In certain embodiments, Y-R5 is F, or Cl. In certain embodiments, Y-R5 is substituted or unsubstituted C1-6 alkyl. Y- R5 is Me, Et, i-Pr, n-Bu, or i-Bu. In certain embodiments, Y-R5 is substituted or unsubstituted haloalkyl. In certain embodiments, Y-R5 is CF3, CHF2, OCF3, or OCHF2. In certain embodiments, Y-R5 is substituted or unsubstituted C1-6 alkoxy. In certain embodiments, Y-R5 is OMe, OEt, or O-i-Pr. In certain embodiments, Y-R5 is substituted or unsubstituted alkylamino or substituted or unsubstituted
dialkylamino. In certain embodiments, Y-R5 is NHMe, NMe2, NHEt, NEt2, N(i-Pr)H, or N(i-Pr)Me. In certain embodiments, Y-R5 is substituted or unsubstituted cycloalkyl. In certain embodiments, Y-R5 is cyclopropyl, cyclobutyl, cyclopentyl, or cyclohexyl. Y-R5 is substituted or unsubstituted heterocycloalkyl. In certain embodiments, Y-R5 is azetidinyl, pyrrolidinyl, piperidinyl, morpholinyl, or piperazinyl. [00182] In certain embodiments, the compound is according to Formula (IIIa) or (IIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00183] In certain embodiments, R1 is halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl. [00184] In certain embodiments, R1 is halo, CN, substituted or unsubstituted C1-6 alkyl. In certain embodiments, R1 is substituted or unsubstituted C1-6 alkyl. In certain embodiments, R1 is Cl, F, CN, Me, Et, n-Pr, i-Pr, n-Bu, i-Bu, t-Bu, CHF2, or CF3. In certain embodiments, R1 is Me. In certain embodiments, R1 is Et. In certain embodiments, R1 is H. In certain embodiments, R1 is substituted or unsubstituted cycloalkyl. In certain embodiment, R1 is cyclopropyl, cyclobutyl, cyclopentyl, or cyclohexyl, each unsubstituted or substituted with halo, or alkyl. [00185] In certain embodiments, the compound is according to Formula (IVa) or (IVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00186] In certain embodiments, X is O. [00187] In certain embodiments, the compound is according to Formula (Va) or (Vb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00188] In certain embodiments, the compound is according to Formula (VIa) or (VIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00189] In certain embodiments, the compound is according to Formula (VIIa) or (VIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00190] In certain embodiments, L1 is substituted or unsubstituted C2-C4 alkylene. In certain embodiments, L1 is C2-C4 alkylene, unsubstituted or substituted with halo, hydroxy, or alkyl. [00191] In certain embodiments, L1 is unsubstituted C2-C4 alkylene. In certain embodiments, L1 is -CH2- CH2-, -CH2-CH2-CH2-, or -CH2-CH2-CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-CH2-CH2-. [00192] In certain embodiments, L2 is a single bond. In certain embodiments, L2 is –C(O)-L3-NR2b-. In certain embodiments, L2 is –C(O)-L3-NH-. In certain embodiments, L2 is –C(O)-L3-N(CH3)-.
[00193] In certain embodiments, L1 is unsubstituted C2-C4 alkylene and L2 is –C(O)-L3-NR2b-. In certain embodiments, L1 is unsubstituted C2-C4 alkylene and and L2 is –C(O)-L3-NR2b-. In certain embodiments, L1 is -CH2-CH2-, -CH2-CH2-CH2-, or -CH2-CH2-CH2-CH2- and and L2 is –C(O)-CH(CH3)-NH-. [00194] In certain embodiments, the compound is according to Formula (VIIIa) or (VIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00195] In certain embodiments, the compound is according to Formula (VIIIc) or (VIIId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00196] In certain embodiments, the compound is according to Formula (IXa) or (IXb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00197] In certain embodiments, the compound is according to Formula (Xa),(Xb), (Xc), or (Xd):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00198] In certain embodiments, the compound is according to Formula (XIa) or (XIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00199] In certain embodiments, X is a single bond; and L1 is substituted or unsubstituted C2-C4 alkynyl. [00200] In certain embodiments, X is a single bond; and L1 is -C≡C-CH2-.
[00201] In certain embodiments, the compound is according to Formula (XIIa) or (XIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00202] In certain embodiments, L2 is a single bond. [00203] In certain embodiments, the compound is according to Formula (XIIIa) or (XIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00204] In certain embodiments, the compound is according to Formula (XIVa) or (XIVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00205] In certain embodiments, the compound is according to Formula (XVa) or (XVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00206] In certain embodiments, the compound is according to Formula (XVIa) or (XVIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00207] In certain embodiments, the compound is according to Formula (XVIIa) or (XVIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00208] In certain embodiments, R2b is H. In certain embodiments, R2b is Me.
[00209] In certain embodiments, the compound is according to Formula (XVIIIa) or (XVIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00210] In certain embodiments, the compound is according to Formula (XIXa) or (XIXb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00211] In certain embodiments, the compound is according to Formula (XXa) or (XXb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00212] In certain embodiments, the compound is according to Formula (XXIa) or (XXIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00213] In certain embodiments, the compound is according to Formula (XXIIa) or (XXIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00214] In certain embodiments, the compound is according to Formula (XXIIIa) or (XXIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00215] In certain embodiments, the compound is according to Formula (XXIVa) or (XXIVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00216] In certain embodiments, L3 is -CH2-, -C(Me)H-, or -CH2-CH2-, -CH2-CH2-CH2-. [00217] In certain embodiments, L3 is -C(Me)H-, -C(Me)2-,
. [00218] In certain embodiments, L3 is -C(Me)H-. [00219] In certain embodiments, the compound is according to Formula (XXVa) or (XXVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00220] In certain embodiments, the compound is according to Formula (XXVIa) or (XXVIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00221] In certain embodiments, the compound is according to Formula (XXVIIa) or (XXVIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00222] In certain embodiments, the compound is according to Formula (XXVIIIa) or (XXVIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00223] In certain embodiments, the compound is according to Formula (XXIXa) or (XXIXb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00224] In certain embodiments, the compound is according to Formula (XXXa) or (XXXb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00225] In certain embodiments, the compound is according to Formula (XXXIa) or (XXXIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00226] In certain embodiments, the compound is according to Formula (XLa) or (XLb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00227] In certain embodiments, R7 is H. In certain embodiments, R7 is C1-4 alkyl, C1-4alkoxy, haloalkyl, halo, or CN. In certain embodiments, R7 is Me, Et, i-Pr, n-Pr, CHF2, CF3, OMe, OCF3, F, Cl, or CN. In certain embodiments, R7 is OMe. In certain embodiments, R7 is at 3-position or m- to N(H)-pyrimidinyl.
[00228] In certain embodiments, the compound is according to Formula (XXXIIa), (XXXIIb), (XXXIIc), (XXXIId), (XXXIIe), (XXXIIf), (XXXIIg), or (XXXIIh):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00229] In certain embodiments, the compound is according to Formula (XLIa) or (XLIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00230] In certain embodiments, the compound is according to Formula (XLIIa) or (XLIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00231] In certain embodiments, X is a single bond, Y is absent; and the compound is according to Formula (P5-I'):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00232] In certain embodiments, X is a single bond, Y is absent, each of A1, A2, A3, and A4, is independently CR7. In certain embodiments, X is a single bond, Y is absent, one of A1, A2, A3, and A4, is N, and others are independently CR7. In certain embodiments, X is a single bond, Y is absent, A3 is N, and others are independently CR7. In certain embodiments, X is a single bond, Y is absent, A4 is N, and others are independently CR7.
[00233] In certain embodiments, X is a single bond, Y is absent, each of A1, A2, and A4, is CH, and A4 is CR7; and the compound is according to Formula (P4-I):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00234] In certain embodiments, X is a single bond, Y is absent, and the compound is according to Formula (P5-Ia), and (P5-Ib):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00235] In certain embodiments, L1 is substituted or unsubstitued ethylene. In certain embodiments, L1 is unsubstitued ethylene. [00236] In certain embodiments, the compound is according to Formula (P4-II):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00237] In certain embodiments, the compound is according to Formula (P5-IIa) or (P5-IIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00238] In certain embodiments, L1 is ethylene, substituted with Me, Et, i-Pr, dimethyl, OH, or methoxy. [00239] In certain embodiments, the compound is according to (P4-IIIa) or (P4-IIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00240] In certain embodiments, the compound is according to (P5-IIIa), (P5-IIIb), (P5-IIIc) or (P5-IIId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00241] In certain embodiments, L3 is -CH2-. [00242] In certain embodiments, the compound is according to Formula (P4-IVa) or (P4-IVb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00243] In certain embodiments, the compound is according to Formula (P5-IVa), (P5-IVb), (P5-IVc) or (P5-IVd):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00244] In certain embodiments, L3 is -CH(Me)-, or C(Me)2-. [00245] In certain embodiments, the compound is according to Formula (P4-Va) or (P4-Vb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00246] In certain embodiments, the compound is according to Formula (P5-Va), (P5-Vb), (P5-Vc) or (P5-Vd):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00247] In certain embodiments, R2b is H or Me. [00248] In certain embodiments, the compound is according to Formula (P2-I):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00249] In certain embodiments, R7 is H, Me, Et, Cl, F, or OMe. In certain embodiments, R7 is H. [00250] In certain embodiments, R1 is Me or Et. In certain embodiments, R5 is cyclopropyl, Me, Et, N(Me)2, or N(i-Pr)(Me). In certain embodiments, R1 is Me or Et and R5 is cyclopropyl, Me, Et, N(Me)2, or N(i-Pr)(Me). In certain embodiments, R1 is Me or Et, R5 is cyclopropyl, Me, Et, N(Me)2, or N(i-Pr)(Me), and R7 is H.
[00251] In certain embodiments, the compound is according to Formula (XLIIIa), (XLIIIb), (XLIIIc) or (XLIIId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00252] In certain embodiments, the compound is according to Formula (XLIVa), (XLIVb), (XLIVc), or (XLIVd):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00253] In certain embodiments, the compound is according to Formula (XLVa), (XLVb), (XLVc) or (XLVd):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00254] In certain embodiments, the compound is according to Formula (XLVIa), (XLVIb), (XLVIc), (XLVId), (XLVIe) or (XLVIf):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00255] In certain embodiments, the compound is according to Formula (XLVIm), (XLVIn), (XLVIo), (XLVIp), (XLVIq) or (XLVIr):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00256] In certain embodiments, the compound is according to Formula (XLVIIa) or (XLVIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00257] In certain embodiments, the compound is according to Formula (XLVIIIa), (XLVIIIb), (XLVIIIc), or (XLVIIId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00258] In certain embodiments, the compound is according to Formula (XLVIIIe), (XLVIIIf), (XLVIIIg), or (XLVIIIh):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00259] In certain embodiments, the compound is according to Formula (La) or (Lb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00260] In certain embodiments, the compound is according to Formula (LIa) or (LIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof; wherein each R11a and R11b is independently Me, Et, or i-Pr.
[00261] In certain embodiments, the compound is according to Formula (LIIa), (LIIb), (LIIc), (LIId), (LIIe) or (LIIf):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00262] In certain embodiments, with respect to formulas Va-LIIf, the Et group, when present, is replaced with Me.
[00263] In certain embodiments, the compound is according to Formula (LXa), (LXb), (LXc), (LXd), (LXe) or (LXf):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00264] In certain embodiments, the compound is according to Formula (LXIa), (LXIb), (LXIc), or (LXId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00265] In certain embodiments, the compound is according to Formula (LXIIa), (LXIIb), (LXIIc), or (LXIId):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof.
[00266] In certain embodiments, the compound is according to Formula (LXIIIa), or (LXIIIb):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof. [00267] In certain embodiments, R5 is as described for Formula P-I. In certain embodiments, R5 is cyclopropyl, Me, Et, N(Me)2, or N(i-Pr)(Me). In certain embodiments, R5 is NHMe, NH(CH(CH2CH3)2), or NH(cycloalkyl) wherein the cycloalkyl is substituted with 1 or 2 fluoro groups. [00268] In certain embodiments, with respect to Formulas (P-I), (P2-I), (I)-(LXIIIb), (P4-I)-(P4-Vb), and (P5-I')-(P5-Vd), the -CONH2 group is replaced with -CON(H)Me. [00269] Each of the following embodiments described herein, unless specified otherwise, may apply independently to each of Formulas (P-I), (P2-I), (I)-(LXIIIb), (P4-I)-(P4-Vb), and (P5-I')-(P5-Vd), above. [00270] In certain embodiments, X is O. In certain embodiments, X is -NR2a-. In certain embodiments, X is -NR2a-; and R2a is H, Me, Et, or i-Pr. In certain embodiments, X is -NR2a-; and R2a is H. In certain embodiments, X is a single bond. [00271] In certain embodiments, L1 is substituted or unsubstituted C1-C4 alkylene. In certain embodiments, L1 is C2-C4 alkylene, unsubstituted or substituted with halo, hydroxy, or alkyl. In certain embodiments, L1 is unsubstituted C1-C4 alkylene. In certain embodiments, L1 is unsubstituted C2-C4 alkylene. In certain embodiments, L1 is -CH2-CH2-, -CH2-CH2-CH2-, or -CH2-CH2-CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-CH2-. In certain embodiments, L1 is -CH2-CH2-CH2-CH2-. [00272] In certain embodiments, L2 is a single bond. In certain embodiments, L2 is –C(O)-L3-NR2b-. In certain embodiments, L2 is –C(O)-L3-NH-. In certain embodiments, L2 is –C(O)-L3-N(CH3)-. [00273] In certain embodiments, L3 is unsubstituted C1-C4alkylene. In certain embodiments, L3 is unsubstituted C2-C4alkylene. In certain embodiments, L3 is unsubstituted C1alkylene. In certain embodiments, L3 is unsubstituted C2alkylene. In certain embodiments, L3 is unsubstituted C3alkylene. [00274] In certain embodiments, R2b is C1-C4alkyl. In certain embodiments, R2b is methyl. [00275] In certain embodiments, R4 is -C(O)-C(R6a)=C(R6b)(R6c). In certain embodiments, R4 is -C(O)- CH=CH2. In certain embodiments, R4 is -S(O)-C(R6a)=C(R6b)(R6c), or -S(O)2-C(R6a)=C(R6b)(R6c). In certain embodiments, R4 is -S(O)2-CH=CH2. In certain embodiments, R4 is -C(O)-C(R6a)=C(R6b)(R6c). [00276] In certain embodiments, R4 is -C(O)-CH=CH2. In certain embodiments, R4 is -S(O)2- C(R6a)=C(R6b)(R6c). In certain embodiments, R4 is -S(O)2-CH=CH2. [00277] In certain embodiments, R7 is hydrogen.
[00278] In certain embodiments, each of R6a, R6b, and R6c is H. In certain embodiments, each of R6a and R6b is H or F; and R6c is substituted or unsubstituted alkyl. In certain embodiments, one of R6a and R6b is CN, the other is H; and R6c is H, or substituted or unsubstituted alkyl. In certain embodiments, each of R6a and R6b is H; and R6c is unsubstituted alkyl. In certain embodiments, each of R6a and R6b is H; and R6c is Me, or Et. In certain embodiments, each of R6a and R6b is H; and R6c is alkyl substituted with amino, alkylamino or dialkylamino. In certain embodiments, each of R6a and R6b is H; and R6c is alkyl substituted with NH2, NHCH3 or N(CH3)2. In certain embodiments, each of R6a and R6b is H; and R6c is alkyl substituted with dimethylamino. In certain embodiments, each of R6a and R6b is H; and R6c is –CH2NMe2. In certain embodiments, R6a and R6b form a bond (thereby forming a triple bond); and R6c is H or substituted or unsubstituted alkyl. In certain embodiments, R6a and R6b form a bond (thereby forming a triple bond); and R6c is Me. In certain embodiments, each of R6a and R6b is H; and R6c is –(CH2)q- heterocycloalkyl; and q is 1, 2, 3, or 4. In certain embodiments, each of R6a and R6b is H; and R6c is – (CH2)q-heterocycloalkyl; and q is 1. In certain embodiments, each of R6a and R6b is H; and R6c is –(CH2)q- heterocycloalkyl; and q is 2. In certain embodiments, each of R6a and R6b is H; and R6c is –(CH2)q- heterocycloalkyl; and q is 3. In certain embodiments, heterocycloalkyl is substituted or unsubstituted azetidinyl, pyrrolidinyl, piperidinyl, or azepinyl. In certain embodiments, heterocycloalkyl is azetidin-1- yl, pyrrolidin-1-yl, piperidin-1-yl, or azepin-1-yl. In certain embodiments, heterocycloalkyl is substituted azetidin-1-yl substituted with 1 or 2 fluoro groups. In certain embodiments, each of R6a and R6b is H or Me; and R6c is –CH2-azetidin-1-yl, -CH2-pyrrolidin-1-yl, or –CH2-piperidin-1-yl. In certain embodiments, each of R6a and R6b is H or Me; and R6c is –CH2-azetidin-1-yl wherein the azetidin-1-yl is substituted with 1 or 2 fluoro groups. In certain embodiments, one of R6a, and R6b is F; and R6c is H or unsubstituted alkyl. In certain embodiments, one of R6a, and R6b is F; and R6c is Me, or Et. In certain embodiments, one of R6a, and R6b is F; and R6c is alkyl substituted with amino, alkylamino or dialkylamino. In certain embodiments, one of R6a, and R6b is F; the other is H; and R6c is H. [00279] In certain embodiments, R4 is -C(O)-CH=CH2, -C(O)-C(F)=CH2, or -S(O)2-CH=CH2. [00280] In certain embodiments, R1a is Me, Et, or i-Pr. In certain embodiments, R1a is Me. [00281] In certain embodiments, R4 is unsubstituted epoxide. In certain embodiments, R4 is epoxide substituted with alkyl. In certain embodiments, R4 is epoxide substituted with Me, Et, i-Pr, or n-Pr. [00282] In certain embodiments, R6a is H. In certain embodiments, R6a is F. In certain embodiments, R6a is CN. [00283] In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')- (P5-Vd), R4 is –C(O)-CRa=C(Rb)R6c. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)- (LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is -C(O)-CH=C(H)R6c. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is –C(O)-CF=C(Rb)R6c. In certain embodiments, R4 is –C(O)-CF=CH2. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is –C(O)-CH=CH2. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is –C(O)-C≡CR6c. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4
is –C(O)-C≡CH. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is –C(O)-C≡C-CH3. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)- (LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is -C(O)-CH=CH-CH2-NMe2. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is -C(O)-CH=CH-CH2- NHMe. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')- (P5-Vd), R4 is -C(O)-CH=CH-CH2-heterocycloalkyl wherein the heterocycloalkyl has 1 nitrogen and is optionally substituted. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4- Vb), or (P5-I')-(P5-Vd), R4 is -C(O)-CH=CH-CH2-heterocycloalkyl wherein the heterocycloalkyl is N- linked and is optionally substituted. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)- (LXIIIb), (P4-I)-(P4-Vb), or (P5-I')-(P5-Vd), R4 is -C(O)-CH=CH-CH2-heterocycloalkyl having 1 nitrogen. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb), (P4-I)-(P4-Vb), or (P5-I')- (P5-Vd), R4 is
. In certain embodiments of Formula (P-I), (P2-I), (I), (LXIa)-(LXIIIb),
. [00284] In certain embodiments, R6c is H. In certain embodiments, R6c is substituted or unsubstituted alkyl. In certain embodiments, R6c is H, or substituted or unsubstituted alkyl. In certain embodiments, R6c is unsubstituted alkyl. In certain embodiments, R6c is Me, or Et. [00285] In certain embodiments, R6c is alkyl substituted with amino, alkylamino or dialkylamino. In certain embodiments, R6c is alkyl substituted with dimethylamino. In certain embodiments, R6c is – CH2NMe2. In certain embodiments, R6c is H or substituted or unsubstituted alkyl. In certain embodiments, R6c is Me. In certain embodiments, R6c is –(CH2)q-heterocycloalkyl; and q is 1, 2, 3, or 4. In certain embodiments, R6c is –(CH2)q-heterocycloalkyl; and q is 1. In certain embodiments, R6c is –(CH2)q- heterocycloalkyl; and q is 2. In certain embodiments, R6c is –(CH2)q-heterocycloalkyl; and q is 3. [00286] In certain embodiments, the compound is according to Formula (XLIVa) or (XLIVc). In certain embodiments, the compound is according to Formula (XLVIe) or (XLVIq). In certain embodiments, the compound is according to Formula (XLVIIIa) or (XLVIIIc). In certain embodiments, the compound is according to Formula (XLIIIa) or (XLIIIc). In certain embodiments, the compound is according to Formula (XLIVa) or (XLIVc); and R4 is -C(O)-CH=CH2. In certain embodiments, the compound is according to Formula (XLIVa) or (XLIVc); and R4 is -C(O)-CH=CHR6c. In particular embodiments of Formula (XLIVa) or (XLIVc), R4 is -C(O)-CH=CH-CH2-NMe2. [00287] In certain embodiments, the compound is according to Formula (XLVIe) or (XLVIq); and R4 is -C(O)-CH=CH2. In certain embodiments, the compound is according to Formula (XLVIe) or (XLVIq); and R4 is -C(O)-CH=CHR6c. In particular embodiments, of Formula (XLVIe) or (XLVIq), R4 is -C(O)-
CH=CH-CH2-NMe2. In certain embodiments, the compound is according to Formula (XLVIIIa) or (XLVIIIc); and R4 is -C(O)-CH=CH2. In certain embodiments, the compound is according to Formula (XLVIIIa) or (XLVIIIc); and R4 is -C(O)-CH=CHR6c. In particular embodiments of Formula (XLVIIIa) or (XLVIIIc), R4 is -C(O)-CH=CH-CH2-NMe2. In certain embodiments, the compound is according to Formula (XLIIIa) or (XLIIIc); and R4 is -C(O)-CH=CH2. In certain embodiments, the compound is according to Formula (XLIIIa) or (XLIIIc); and R4 is -C(O)-CH=CHR6c. In particular embodiments of Formula (XLIIIa) or (XLIIIc), R4 is -C(O)-CH=CH-CH2-NMe2. [00288] In some embodiments, with respect to the compounds of Formula (P-I), (P4-I), (P2-I), (XLIIIa), (XLIIIb), (XLIIIc), (XLIIId), (XLIVa), (XLIVb), (XLIVc), (XLIVd), Formula (XLVIa), (XLVIb), (XLVIc), (XLVId), (XLVIe), (XLVIf), (XLVIm), (XLVIn), (XLVIo), (XLVIp), (XLVIq), (XLVIr), (XLVIIIa), (XLVIIIc), (XLVIIIe), (XLVIIIg), (LXa), (LXb), (LXc), (LXd), (LXe), (LXf), (LXIa), (LXIb), (LXIc), (LXId), (LXIIa), (LXIIb), (LXIIc), (LXIId), (LXIIIa), or (LXIIIb), R4 is -C(O)-B- C(R6a)=C(R6b)-C(O)-R6c, -S(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)2-B-C(R6a)=C(R6b)-C(O)-R6c, -B- C(R6a)=C(R6b)-C(O)-R6c, -B-C(R6a)=C(R6b)-S(O)-R6c, -B-C(R6a)=C(R6b)-S(O)2-R6c, -B-C(R6a)=C(R6b)- P(O)-R6aR6b; or -B-C(R6a)=C(R6b)-P(O)-OR6aOR6b; B is substituted or unsubstituted C1-4 alkylene, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; and R6c is substituted or unsubstituted alkoxy, substituted or unsubstituted amino, substituted or unsubstituted heterocycloalkyl, having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur. In certain embodiments, R4 is -C(O)-B-C(R6a)=C(R6b)-C(O)-R6c, -S(O)-B-C(R6a)=C(R6b)-C(O)-R6c, or - S(O)2-B-C(R6a)=C(R6b) -C(O)-R6c. In certain embodiments, R4 is -B-C(R6a)=C(R6b)-C(O)-R6c, -B- C(R6a)=C(R6b)-S(O)-R6c, -B-C(R6a)=C(R6b)-S(O)2-R6c. In certain embodiments, R4 is -B-C(R6a)=C(R6b)- P(O)-R6aR6b; or -B-C(R6a)=C(R6b)-P(O)-OR6aOR6b. In particular embodiments, R4 is -B-C(R6a)=C(R6b)- C(O)-R6c. In certain embodiments, R4 is -C(O)-CH=CH-CH2-NMe2. In certain embodiments, R4 is -C(O)- CH=CH-CH2-NHMe. In certain embodiments, R6c is substituted or unsubstituted alkoxy. In certain embodiments, R6c is substituted or unsubstituted OMe, OEt, O-i-Pr, or O-t-Bu. In certain embodiments, R6c is OMe, OEt, O-i-Pr, or O-t-Bu. In certain embodiments, R6c is substituted or unsubstituted heterocycloalkyl. In certain embodiments, R6c is substituted or unsubstituted azetidinyl, pyrrolidinyl, piperidinyl, or azepinyl. In certain embodiments, R6c is azetidin-1-yl, pyrrolidin-1-yl, piperidin-1-yl, or azepin-1-yl. In certain embodiments, R6c is piperidin-1-yl. In certain embodiments, R6c is substituted or unsubstituted amino. In certain embodiments, R6c is substituted amino. In certain embodiments, R6c is dialkylamino. In certain embodiments, R6c is dimethylamino, diethylamino, N-isopropyl-N-methylamino, or N-isopropyl-N-ethylamino. In certain embodiments, R6c is dimethylamino.
[00289] In some embodiments, the compound is:
. [00290] In some particular embodiments, the compound is any compound selected from Table 2A or Table 2B, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00291] In some particular embodiments, the compound is any of compounds listed below in Table 1, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof: Table 1.
[00292] In some particular embodiments, the compound is any of compounds listed below, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof:
[00293] In some particular embodiments, the compound is any compound selected from Compound #163, 164, 202, 203, 213, 224, 226, 227, 228, 230, 232, 233, 241, and 247, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00294] In some particular embodiments, the compound is any compound selected from Compound #135, 149, 156, 158, 159, and 160, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00295] In some particular embodiments, the compound is any compound selected from Compound #142A, 204, 219, 221, 228, 232, and 246 or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. In some particular embodiments, the compound is any compound selected from Compound #142A, 204, 228, and 232 or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00296] In some particular embodiments, the compound is any compound selected from Compound #142A, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00297] In some particular embodiments, the compound is any compound selected from Compound #228, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00298] In some particular embodiments, the compound is any compound selected from Compound #204, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00299] In some particular embodiments, the compound is any compound selected from Compound #232, or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00300] In some particular embodiments, the compound is any one compound selected from:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00301] In some particular embodiments, the compound is any one compound selected from:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00302] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00303] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00304] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00305] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00306] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00307] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00308] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00309] In some particular embodiments, the compound is:
or a pharmaceutically acceptable salt or solvate or stereoisomer thereof. [00310] Certain embodiments of the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) display improved potency against FLT3 with IC50 values of as low as less than 1 nM or less than 0.1 nM, and/or high occupancy of active site of FLT3 (e.g., more than 50 %, 70 % or 90% occupancy) at low dosages of below 5 mg/kg (e.g., at or below 3 mg/kg) when administered in vivo (e.g., in rats). [00311] In some embodiments, provided herein is a pharmaceutical composition comprising a compound selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00312] In some embodiments, provided herein is a pharmaceutical composition comprising a therapeutically effective amount of a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd), and a pharmaceutically acceptable excipient. [00313] In some embodiments, the pharmaceutical composition is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, or rectal administration. [00314] In some embodiments, provided herein are methods for treating an proliferative disease or condition comprising administering to a patient in need the pharmaceutical composition provided herein. [00315] In certain embodiments, the patient has one or more FLT3 mutations. In certain embodiments, the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. In certain embodiments, the FLT3 mutation is N676K. In certain embodiments, the FLT3 mutation is F691L. In certain embodiments, the FLT3 mutation is D835H. In certain embodiments, the FLT3 mutation is D835V. In certain embodiments, the FLT3 mutation is D835Y. In certain embodiments, the FLT3 mutation is Y842C. In certain embodiments, the patient has an NPM1 mutation. [00316] In some embodiments, the autoimmune disease is selected from hematological malignancies. [00317] In some embodiments, provided herein are methods for treating a heteroimmune disease or condition comprising administering to a patient in need the pharmaceutical composition provided herein. [00318] In some embodiments, provided herein are methods for treating a cancer comprising administering to a patient in need the pharmaceutical composition provided herein. [00319] In certain embodiments, the cancer has an ALK (anaplastic lymphoma kinase) mutation. In certain embodiments, the cancer is positive for an ALK fusion. In certain embodiments, the
cancer is resistant to an ALK inhibitor. In certain embodiments, the cancer has an ALK mutation selected from the group consisting of T1151K, I1171N, I1171S, I1171T, F1174I, F1174L, F1174V, V1180L, L1196M, L1196Q, L1198F, L1198H, C1156Y, C1159Y, G1202R, D1203N, F1245V, L1256F, G1269A, and combinations thereof. [00320] In some embodiments, the cancer is a hematological malignancy. [00321] In some embodiments, the disease or condition is leukemia, lymphoma, or multiple myeloma. In certain embodiments, the disease or condition is acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), mast-cell leukemia (MCL), or myelodysplastic syndrome (MDS). [00322] In certain embodiments, the disease or condition is acute myeloid leukemia (AML). In certain embodiments, the AML is FLT3 mutation-positive. In certain embodiments, the AML is newly diagnosed. In certain embodiments, the AML is FLT3 mutation-positive and newly diagnosed. In certain embodiments, the AML is relapsed or refractory. In certain embodiments, the AML is relapsed or refractory and is FLT3 mutation-positive. In certain embodiments, the FLT3 mutation is an FLT3-ITD mutation. In certain embodiments, the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. In certain embodiments, the FLT3 mutation is N676K. In certain embodiments, the FLT3 mutation is F691L. In certain embodiments, the FLT3 mutation is D835H. In certain embodiments, the FLT3 mutation is D835V. In certain embodiments, the FLT3 mutation is D835Y. In certain embodiments, the FLT3 mutation is Y842C. In certain embodiments, the patient has an NPM1 mutation. [00323] In certain embodiments, the AML is resistant to chemotherapy. In certain embodiments, the AML is resistant to chemotherapy and has developed a FLT3-IND mutation, including, but not limited to at least one mutation selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. [00324] In certain embodiments, the AML is resistant to a previously administered FLT3 inhibitor. In certain embodiments, the AML is resistant to gilteritinib. In certain embodiments, the AML is resistant to midostaurin. [00325] In some embodiments, provided herein are methods for treating mastocytosis comprising administering to a patient in need a pharmaceutical composition provided herein. [00326] In some embodiments, provided herein are methods for treating osteoporosis or bone resorption disorders comprising administering to a patient in need a pharmaceutical composition provided herein. [00327] In some embodiments, provided herein are methods for treating an inflammatory disease or condition comprising administering to a patient in need a pharmaceutical composition provided herein. [00328] In some embodiments, provided herein are methods for treating lupus comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound
that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00329] In some embodiments, provided herein are methods for treating a heteroimmune disease or condition comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00330] In some embodiments provided herein are methods for treating diffuse large B cell lymphoma, follicular lymphoma or chronic lymphocytic leukemia comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00331] In some embodiments, provided herein are methods for treating mastocytosis, comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00332] In some embodiments, provided herein are methods for treating osteoporosis or bone resorption disorders comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00333] In some embodiments, provided herein are methods for treating an inflammatory disease or condition comprising administering to a subject in need thereof a composition containing a therapeutically effective amount of a compound that is an inhibitor of FLT3 selected from Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof. [00334] In some embodiments, provided herein is a pharmaceutical composition comprising a pharmaceutically acceptable carrier and a pharmaceutically effective amount of a compound according to any one of the formulas described herein. In some embodiments, the compound is according to any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd). [00335] In some embodiments, the pharmaceutical composition is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, or rectal administration. [00336] In some embodiments, the carrier is a parenteral carrier. [00337] In some embodiments, the carrier is an oral carrier. [00338] In some embodiments, the carrier is a topical carrier.
[00339] Any combination of the groups described above for the various variables is contemplated herein. It is understood that substituents and substitution patterns on the compounds provided herein can be selected by one of ordinary skill in the art to provide compounds that are chemically stable and that can be synthesized by techniques known in the art, as well as those set forth herein. [00340] Further representative embodiments of compounds of Formula (I), include compounds listed in Table 2A and Table 2B, or a pharmaceutically acceptable salt, solvate, hydrate, or stereoisomer thereof. [00341] Throughout the specification, groups and substituents thereof can be chosen by one skilled in the field to provide stable moieties and compounds. [00342] In some embodiments, the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) inhibit FLT3. In some embodiments, the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are used to treat patients suffering from FLT3-dependent or FLT3 mediated conditions or diseases, including, but not limited to, proliferative diseases such as hematological malignancies. [00343] In some embodiments, the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are used to treat patients suffering from FLT-dependent or FLT3 mediated conditions or diseases, including, but not limited to, cancer, e.g. hematological malignancies. Preparation of Compounds [00344] Compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be synthesized using standard synthetic reactions known to those of skill in the art or using methods known in the art. The reactions can be employed in a linear sequence to provide the compounds or they may be used to synthesize fragments which are subsequently joined by the methods known in the art. Exemplary methods are provided in the Examples herein. [00345] Described herein are compounds that inhibit the activity of FLT3, and processes for their preparation. Also described herein are pharmaceutically acceptable salts, pharmaceutically acceptable solvates, pharmaceutically active metabolites, and pharmaceutically acceptable prodrugs of such compounds. Pharmaceutical compositions that include at least one such compound or a pharmaceutically acceptable salt, pharmaceutically acceptable solvate, pharmaceutically active metabolite or pharmaceutically acceptable prodrug of such compound, are provided. [00346] The starting material used for the synthesis of the compounds described herein may be synthesized or can be obtained from commercial sources, such as, but not limited to, Aldrich Chemical Co. (Milwaukee, Wisconsin), Bachem (Torrance, California), or Sigma Chemical Co. (St. Louis, Mo.). The compounds described herein, and other related compounds having different substituents can be synthesized using techniques and materials known to those of skill in the art, such as described, for example, in March, ADVANCED ORGANIC CHEMISTRY 4th Ed., (Wiley 1992); Carey and Sundberg,
ADVANCED ORGANIC CHEMISTRY 4th Ed., Vols. A and B (Plenum 2000, 2001); Green and Wuts, PROTECTIVE GROUPS IN ORGANIC SYNTHESIS 3rd Ed., (Wiley 1999); Fieser and Fieser’s Reagents for Organic Synthesis, Volumes 1-17 (John Wiley and Sons, 1991); Rodd’s Chemistry of Carbon Compounds, Volumes 1-5 and Supplementals (Elsevier Science Publishers, 1989); Organic Reactions, Volumes 1-40 (John Wiley and Sons, 1991); and Larock’s Comprehensive Organic Transformations (VCH Publishers Inc., 1989). (all of which are incorporated by reference in their entirety). Additional methods for the synthesis of compounds described herein may be found in International Patent Publication No. WO 01/01982901, Arnold et al. Bioorganic & Medicinal Chemistry Letters 10 (2000) 2167-2170; Burchat et al. Bioorganic & Medicinal Chemistry Letters 12 (2002) 1687-1690. General methods for the preparation of compound as disclosed herein may be derived from known reactions in the field, and the reactions may be modified by the use of appropriate reagents and conditions, as would be recognized by the skilled person, for the introduction of the various moieties found in the formulae as provided herein. [00347] The products of the reactions may be isolated and purified, if desired, using conventional techniques, including, but not limited to, filtration, distillation, crystallization, chromatography, and the like. Such materials may be characterized using conventional means, including physical constants and spectral data. [00348] Compounds described herein may be prepared as a single isomer or a mixture of isomers. [00349] In some embodiments, representative compounds of Formula (I) are prepared according to synthetic schemes depicted herein. [00350] In certain embodiments, compounds of Formula (I) are prepared according to the following scheme:
[00351] A compound of Formula (I) may be prepared by starting with intermediate I-1. The amino group in I-1 is converted to a methoxy group under acidic conditions to afford intermediate I-2, which is reacted with Cy-YH to afford intermediate I-3. Intermediate I-3 is next reacted with amine NHR2cR2d to afford intermediate I-4, which is subjected to Buchwald-Hartwigh cross coupling conditions to afford intermediate I-6. The ester of intermediate I-6 is cleaved to afford intermediate I-7, which is reacted with intermediate I-8 to afford a compound of Formula (I). [00352] In certain embodiments, compounds of Formula (I) are prepared according to the following scheme
[00353] A compound of Formula (I) may be prepared by starting with intermediate I-9, which is coupled to intermediate I-10 using appropriate coupling reagents and conditions to afford intermediate I-11. The Boc group of intermediate I-11 is removed under acidic conditions to afford intermediate I-12, which is then coupled to R4-OH using the appropriate coupling reagents and conditions to afford a compound of Formula (I). Further Forms of Compounds [00354] Compounds disclosed herein have a structure of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd). It is understood that when reference is made to compounds described herein, it is meant to include compounds of any of Formula (P- I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5- Vd) as well as to all of the specific compounds that fall within the scope of these generic formulae, unless otherwise indicated. [00355] Compounds described herein may possess one or more stereocenters and each center may exist in the R or S configuration. Compounds presented herein include all diastereomeric, enantiomeric, and epimeric forms as well as the appropriate mixtures thereof. Stereoisomers may be obtained, if desired, by
methods known in the art as, for example, the separation of stereoisomers by chiral chromatographic columns. [00356] Diastereomeric mixtures can be separated into their individual diastereomers on the basis of their physical chemical differences by methods known, for example, by chromatography and/or fractional crystallization. In some embodiments, enantiomers can be separated by chiral chromatographic columns. In some embodiments, enantiomers can be separated by converting the enantiomeric mixture into a diastereomeric mixture by reaction with an appropriate optically active compound (e.g., alcohol), separating the diastereomers and converting (e.g., hydrolyzing) the individual diastereomers to the corresponding pure enantiomers. All such isomers, including diastereomers, enantiomers, and mixtures thereof are considered as part of the compositions described herein. [00357] Methods and formulations described herein include the use of N-oxides, crystalline forms (also known as polymorphs), or pharmaceutically acceptable salts of compounds described herein, as well as active metabolites of these compounds having the same type of activity. In some situations, compounds may exist as tautomers. All tautomers are included within the scope of the compounds presented herein. In addition, compounds described herein can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. Solvated forms of compounds presented herein are also considered to be disclosed herein. [00358] Compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in unoxidized form can be prepared from N-oxides of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) by treating with a reducing agent, such as, but not limited to, sulfur, sulfur dioxide, triphenyl phosphine, lithium borohydride, sodium borohydride, phosphorus trichloride, tribromide, or the like in a suitable inert organic solvent, such as, but not limited to, acetonitrile, ethanol, aqueous dioxane, or the like at 0 to 80°C. [00359] In some embodiments, compounds described herein are prepared as prodrugs. A “prodrug” refers to an agent that is converted into the parent drug in vivo. Prodrugs are often useful because, in some situations, they may be easier to administer than the parent drug. They may, for instance, be bioavailable by oral administration whereas the parent is not. The prodrug may also have improved solubility in pharmaceutical compositions over the parent drug. An example, without limitation, of a prodrug would be a compound described herein, which is administered as an ester (the “prodrug”) to facilitate transmittal across a cell membrane where water solubility is detrimental to mobility but which then is metabolically hydrolyzed to the carboxylic acid, the active entity, once inside the cell where water-solubility is beneficial. A further example of a prodrug might be a short peptide (polyaminoacid) bonded to an acid group where the peptide is metabolized to reveal the active moiety. In certain embodiments, upon in vivo administration, a prodrug is chemically converted to the biologically, pharmaceutically, or therapeutically active form of the compound. In certain embodiments, a prodrug is enzymatically metabolized by one or more steps or processes to the biologically, pharmaceutically, or therapeutically active form of the compound. To produce a prodrug, a pharmaceutically active compound is modified such that the active
compound will be regenerated upon in vivo administration. The prodrug can be designed to alter the metabolic stability or the transport characteristics of a drug, to mask side effects or toxicity, to improve the flavor of a drug or to alter other characteristics or properties of a drug. By virtue of knowledge of pharmacodynamic processes and drug metabolism in vivo, those of skill in this art, once a pharmaceuti- cally active compound is known, can design prodrugs of the compound. (see, for example, Nogrady (1985) Medicinal Chemistry A Biochemical Approach, Oxford University Press, New York, pages 388- 392; Silverman (1992), The Organic Chemistry of Drug Design and Drug Action, Academic Press, Inc., San Diego, pages 352-401, Saulnier et al., (1994), Bioorganic and Medicinal Chemistry Letters, Vol. 4, p. 1985). [00360] Prodrug forms of the herein described compounds, wherein the prodrug is metabolized in vivo to produce a derivative as set forth herein are included within the scope of the claims. In some cases, some of the herein-described compounds may be a prodrug for another derivative or active compound. [00361] Prodrugs are often useful because, in some situations, they may be easier to administer than the parent drug. They may, for instance, be bioavailable by oral administration whereas the parent is not. The prodrug may also have improved solubility in pharmaceutical compositions over the parent drug. Prodrugs may be designed as reversible drug derivatives, for use as modifiers to enhance drug transport to site- specific tissues. In some embodiments, the design of a prodrug increases the effective water solubility. See, e.g., Fedorak et al., Am. J. Physiol., 269:G210-218 (1995); McLeod et al., Gastroenterol, 106:405- 413 (1994); Hochhaus et al., Biomed. Chrom., 6:283-286 (1992); J. Larsen and H. Bundgaard, Int. J. Pharmaceutics, 37, 87 (1987); J. Larsen et al., Int. J. Pharmaceutics, 47, 103 (1988); Sinkula et al., J. Pharm. Sci., 64:181-210 (1975); T. Higuchi and V. Stella, Pro-drugs as Novel Delivery Systems, Vol.14 of the A.C.S. Symposium Series; and Edward B. Roche, Bioreversible Carriers in Drug Design, American Pharmaceutical Association and Pergamon Press, 1987, all incorporated herein in their entirety. [00362] Sites on the aromatic ring portion of compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) can be susceptible to various metabolic reactions, therefore incorporation of appropriate substituents on the aromatic ring structures, such as, by way of example only, halogens can reduce, minimize or eliminate this metabolic pathway. [00363] Compounds described herein include isotopically-labeled compounds, which are identical to those recited in the various formulas and structures presented herein, but for the fact that one or more atoms are replaced by an atom having an atomic mass or mass number different from the atomic mass or mass number usually found in nature. Examples of isotopes that can be incorporated into the present compounds include isotopes of hydrogen, carbon, nitrogen, oxygen, fluorine and chlorine, such as 2H, 3H, 13C, 14C, 15N, 18O, 17O, 35S, 18F, 36Cl, respectively. Certain isotopically-labeled compounds described herein, for example those into which radioactive isotopes such as 3H and 14C are incorporated, are useful in drug and/or substrate tissue distribution assays. Further, substitution with isotopes such as deuterium, i.e., 2H, can afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life or reduced dosage requirements.
[00364] In additional or some embodiments, the compounds described herein are metabolized upon administration to an organism in need to produce a metabolite that is then used to produce a desired effect, including a desired therapeutic effect. [00365] Compounds described herein may be formed as, and/or used as, pharmaceutically acceptable salts. The type of pharmaceutical acceptable salts, include, but are not limited to: (1) acid addition salts, formed by reacting the free base form of the compound with a pharmaceutically acceptable: inorganic acid such as hydrochloric acid, hydrobromic acid, sulfuric acid, nitric acid, phosphoric acid, metaphosphoric acid, and the like; or with an organic acid such as acetic acid, propionic acid, hexanoic acid, cyclopentanepropionic acid, glycolic acid, pyruvic acid, lactic acid, malonic acid, succinic acid, malic acid, maleic acid, fumaric acid, trifluoroacetic acid, tartaric acid, citric acid, benzoic acid, 3-(4- hydroxybenzoyl)benzoic acid, cinnamic acid, mandelic acid, methanesulfonic acid, ethanesulfonic acid, 1,2-ethanedisulfonic acid, 2-hydroxyethanesulfonic acid, benzenesulfonic acid, toluenesulfonic acid, 2- naphthalenesulfonic acid, 4-methylbicyclo-[2.2.2]oct-2-ene-1-carboxylic acid, glucoheptonic acid, 4,4’- methylenebis-(3-hydroxy-2-ene-1 -carboxylic acid), 3-phenylpropionic acid, trimethylacetic acid, tertiary butylacetic acid, lauryl sulfuric acid, gluconic acid, glutamic acid, hydroxynaphthoic acid, salicylic acid, stearic acid, muconic acid, and the like; (2) salts formed when an acidic proton present in the parent compound either is replaced by a metal ion, e.g., an alkali metal ion (e.g. lithium, sodium, potassium), an alkaline earth ion (e.g. magnesium, or calcium), or an aluminum ion; or coordinates with an organic base. Acceptable organic bases include ethanolamine, diethanolamine, triethanolamine, tromethamine, N- methylglucamine, and the like. Acceptable inorganic bases include aluminum hydroxide, calcium hydroxide, potassium hydroxide, sodium carbonate, sodium hydroxide, and the like. [00366] The corresponding counterions of the pharmaceutically acceptable salts may be analyzed and identified using various methods including, but not limited to, ion exchange chromatography, ion chromatography, capillary electrophoresis, inductively coupled plasma, atomic absorption spectroscopy, mass spectrometry, or any combination thereof. [00367] The salts are recovered by using at least one of the following techniques: filtration, precipitation with a non-solvent followed by filtration, evaporation of the solvent, or, in the case of aqueous solutions, lyophilization. [00368] It should be understood that a reference to a pharmaceutically acceptable salt includes the solvent addition forms or crystal forms thereof, particularly solvates or polymorphs. Solvates contain either stoichiometric or non-stoichiometric amounts of a solvent, and may be formed during the process of crystallization with pharmaceutically acceptable solvents such as water, ethanol, and the like. Hydrates are formed when the solvent is water, or alcoholates are formed when the solvent is alcohol. Solvates of compounds described herein can be conveniently prepared or formed during the processes described herein. In addition, the compounds provided herein can exist in unsolvated as well as solvated forms. In general, the solvated forms are considered equivalent to the unsolvated forms for the purposes of the compounds and methods provided herein.
[00369] It should be understood that a reference to a salt includes the solvent addition forms or crystal forms thereof, particularly solvates or polymorphs. Solvates contain either stoichiometric or non- stoichiometric amounts of a solvent, and are often formed during the process of crystallization with pharmaceutically acceptable solvents such as water, ethanol, and the like. Hydrates are formed when the solvent is water, or alcoholates are formed when the solvent is alcohol. Polymorphs include the different crystal packing arrangements of the same elemental composition of a compound. Polymorphs usually have different X-ray diffraction patterns, infrared spectra, melting points, density, hardness, crystal shape, optical and electrical properties, stability, and solubility. Various factors such as the recrystallization solvent, rate of crystallization, and storage temperature may cause a single crystal form to dominate. [00370] Compounds described herein may be in various forms, including but not limited to, amorphous forms, milled forms and nano-particulate forms. In addition, compounds described herein include crystalline forms, also known as polymorphs. Polymorphs include the different crystal packing arrangements of the same elemental composition of a compound. Polymorphs usually have different X- ray diffraction patterns, infrared spectra, melting points, density, hardness, crystal shape, optical and electrical properties, stability, and solubility. Various factors such as the recrystallization solvent, rate of crystallization, and storage temperature may cause a single crystal form to dominate. [00371] The screening and characterization of the pharmaceutically acceptable salts, polymorphs, and/or solvates may be accomplished using a variety of techniques including, but not limited to, thermal analysis, x-ray diffraction, spectroscopy, vapor sorption, and microscopy. Thermal analysis methods address thermo chemical degradation or thermo physical processes including, but not limited to, polymorphic transitions, and such methods are used to analyze the relationships between polymorphic forms, determine weight loss, to find the glass transition temperature, or for excipient compatibility studies. Such methods include, but are not limited to, Differential scanning calorimetry (DSC), Modulated Differential Scanning Calorimetry (MDCS), Thermogravimetric analysis (TGA), and Thermogravi-metric and Infrared analysis (TG/IR). X-ray diffraction methods include, but are not limited to, single crystal and powder diffractometers and synchrotron sources. The various spectroscopic techniques used include, but are not limited to, Raman, FTIR, UVIS, and NMR (liquid and solid state). The various microscopy techniques include, but are not limited to, polarized light microscopy, Scanning Electron Microscopy (SEM) with Energy Dispersive X-Ray Analysis (EDX), Environmental Scanning Electron Microscopy with EDX (in gas or water vapor atmosphere), IR microscopy, and Raman microscopy. [00372] Throughout the specification, groups and substituents thereof can be chosen by one skilled in the field to provide stable moieties and compounds. Pharmaceutical Composition/Formulation [00373] Pharmaceutical compositions may be formulated in a conventional manner using one or more physiologically acceptable carriers including excipients and auxiliaries which facilitate processing of the active compounds into preparations which can be used pharmaceutically. Proper formulation is dependent upon the route of administration chosen. Any of the well-known techniques, carriers, and excipients may
be used as suitable and as understood in the art. A summary of pharmaceutical compositions described herein may be found, for example, in Remington: The Science and Practice of Pharmacy, Nineteenth Ed (Easton, Pa.: Mack Publishing Company, 1995); Hoover, John E., Remington’s Pharmaceutical Sciences, Mack Publishing Co., Easton, Pennsylvania 1975; Liberman, H.A. and Lachman, L., Eds., Pharmaceutical Dosage Forms, Marcel Decker, New York, N.Y., 1980; and Pharmaceutical Dosage Forms and Drug Delivery Systems, Seventh Ed. (Lippincott Williams & Wilkins 1999), herein incorporated by reference in their entirety. [00374] A pharmaceutical composition, as used herein, refers to a mixture of a compound described herein, such as, for example, compounds of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) with other chemical components, such as carriers, stabilizers, diluents, dispersing agents, suspending agents, thickening agents, and/or excipients. The pharmaceutical composition facilitates administration of the compound to an organism. In practicing the methods of treatment or use provided herein, therapeutically effective amounts of compounds described herein are administered in a pharmaceutical composition to a mammal having a disease, disorder, or condition to be treated. Preferably, the mammal is a human. A therapeutically effective amount can vary widely depending on the severity of the disease, the age and relative health of the subject, the potency of the compound used and other factors. The compounds can be used singly or in combination with one or more therapeutic agents as components of mixtures. [00375] In certain embodiments, compositions may also include one or more pH adjusting agents or buffering agents, including acids such as acetic, boric, citric, lactic, phosphoric and hydrochloric acids; bases such as sodium hydroxide, sodium phosphate, sodium borate, sodium citrate, sodium acetate, sodium lactate and tris-hydroxymethylaminomethane; and buffers such as citrate/dextrose, sodium bicarbonate and ammonium chloride. Such acids, bases and buffers are included in an amount required to maintain pH of the composition in an acceptable range. [00376] In some embodiments, compositions may also include one or more salts in an amount required to bring osmolality of the composition into an acceptable range. Such salts include those having sodium, potassium or ammonium cations, and chloride, citrate, ascorbate, borate, phosphate, bicarbonate, sulfate, thiosulfate or bisulfite anions; suitable salts include sodium chloride, potassium chloride, sodium thiosulfate, sodium bisulfite and ammonium sulfate. [00377] The term “pharmaceutical combination” as used herein, means a product that results from the mixing or combining of more than one active ingredient and includes both fixed and non-fixed combinations of the active ingredients. The term “fixed combination” means that the active ingredients, e.g. a compound described herein and a co-agent, are both administered to a patient simultaneously in the form of a single entity or dosage. The term “non-fixed combination” means that the active ingredients, e.g. a compound described herein and a co-agent, are administered to a patient as separate entities either simultaneously, concurrently or sequentially with no specific intervening time limits, wherein such administration provides effective levels of the two compounds in the body of the patient. The latter also applies to cocktail therapy, e.g. the administration of three or more active ingredients.
[00378] The pharmaceutical compositions described herein can be administered to a subject by multiple administration routes, including but not limited to, oral, parenteral (e.g., intravenous, subcutaneous, intramuscular), intranasal, buccal, topical, rectal, or transdermal administration routes. The pharmaceutical compositions described herein include, but are not limited to, aqueous liquid dispersions, self-emulsifying dispersions, solid solutions, liposomal dispersions, aerosols, solid dosage forms, powders, immediate release formulations, controlled release formulations, fast melt formulations, tablets, capsules, pills, delayed release formulations, extended release formulations, pulsatile release formulations, multiparticulate formulations, and mixed immediate and controlled release formulations. [00379] Pharmaceutical compositions including a compound described herein may be manufactured in a conventional manner, such as, by way of example only, by means of conventional mixing, dissolving, granulating, dragee-making, levigating, emulsifying, encapsulating, entrapping or compression processes. [00380] The pharmaceutical compositions will include at least one compound described herein, such as, for example, a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) as an active ingredient in free-acid or free-base form, or in a pharmaceutically acceptable salt form. In addition, the methods and pharmaceutical compositions described herein include the use of N-oxides, crystalline forms (also known as polymorphs), as well as active metabolites of these compounds having the same type of activity. In some situations, compounds may exist as tautomers. All tautomers are included within the scope of the compounds presented herein. Additionally, the compounds described herein can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like. The solvated forms of the compounds presented herein are also considered to be disclosed herein. [00381] “Antifoaming agents” reduce foaming during processing which can result in coagulation of aqueous dispersions, bubbles in the finished film, or generally impair processing. Exemplary anti-foaming agents include silicon emulsions or sorbitan sesquoleate. [00382] “Antioxidants” include, for example, butylated hydroxytoluene (BHT), sodium ascorbate, ascorbic acid, sodium metabisulfite, and tocopherol. In certain embodiments, antioxidants enhance chemical stability where required. [00383] In certain embodiments, compositions provided herein may also include one or more preservatives to inhibit microbial activity. Suitable preservatives include mercury-containing substances such as merfen and thiomersal; stabilized chlorine dioxide; and quaternary ammonium compounds such as benzalkonium chloride, cetyltrimethylammonium bromide and cetylpyridinium chloride. [00384] Formulations described herein may benefit from antioxidants, metal chelating agents, thiol containing compounds and other general stabilizing agents. Examples of such stabilizing agents, include, but are not limited to: (a) about 0.5% to about 2% w/v glycerol, (b) about 0.1% to about 1% w/v methionine, (c) about 0.1% to about 2% w/v monothioglycerol, (d) about 1 mM to about 10 mM EDTA, (e) about 0.01% to about 2% w/v ascorbic acid, (f) 0.003% to about 0.02% w/v polysorbate 80, (g) 0.001% to about 0.05% w/v. polysorbate 20, (h) arginine, (i) heparin, (j) dextran sulfate, (k) cyclodextrins,
(l) pentosan polysulfate and other heparinoids, (m) divalent cations such as magnesium and zinc; or (n) combinations thereof. [00385] “Binders” impart cohesive qualities and include, e.g., alginic acid and salts thereof; cellulose derivatives such as carboxymethylcellulose, methylcellulose (e.g., Methocel®), hydroxypropylmethylcellulose, hydroxyethylcellulose, hydroxypropylcellulose (e.g., Klucel®), ethylcellulose (e.g., Ethocel®), and microcrystalline cellulose (e.g., Avicel®); microcrystalline dextrose; amylose; magnesium aluminum silicate; polysaccharide acids; bentonites; gelatin; polyvinylpyrrolidone/vinyl acetate copolymer; crosspovidone; povidone; starch; pregelatinized starch; tragacanth, dextrin, a sugar, such as sucrose (e.g., Dipac®), glucose, dextrose, molasses, mannitol, sorbitol, xylitol (e.g., Xylitab®), and lactose; a natural or synthetic gum such as acacia, tragacanth, ghatti gum, mucilage of isapol husks, polyvinylpyrrolidone (e.g., Polyvidone® CL, Kollidon® CL, Polyplasdone® XL- 10), larch arabogalactan, Veegum®, polyethylene glycol, waxes, sodium alginate, and the like. [00386] A “carrier” or “carrier materials” include any commonly used excipients in pharmaceutics and should be selected on the basis of compatibility with compounds disclosed herein, such as, compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and the release profile properties of the desired dosage form. Exemplary carrier materials include, e.g., binders, suspending agents, disintegration agents, filling agents, surfactants, solubilizers, stabilizers, lubricants, wetting agents, diluents, and the like. “Pharmaceutically compatible carrier materials” may include, but are not limited to, acacia, gelatin, colloidal silicon dioxide, calcium glycerophosphate, calcium lactate, maltodextrin, glycerine, magnesium silicate, polyvinylpyrrollidone (PVP), cholesterol, cholesterol esters, sodium caseinate, soy lecithin, taurocholic acid, phosphotidylcholine, sodium chloride, tricalcium phosphate, dipotassium phosphate, cellulose and cellulose conjugates, sugars sodium stearoyl lactylate, carrageenan, monoglyceride, diglyceride, pregelatinized starch, and the like. See, e.g., Remington: The Science and Practice of Pharmacy, Nineteenth Ed (Easton, Pa.: Mack Publishing Company, 1995); Hoover, John E., Remington’s Pharmaceutical Sciences, Mack Publishing Co., Easton, Pennsylvania 1975; Liberman, H.A. and Lachman, L., Eds., Pharmaceutical Dosage Forms, Marcel Decker, New York, N.Y., 1980; and Pharmaceutical Dosage Forms and Drug Delivery Systems, Seventh Ed. (Lippincott Williams & Wilkins1999). [00387] “Dispersing agents,” and/or “viscosity modulating agents” include materials that control the diffusion and homogeneity of a drug through liquid media or a granulation method or blend method. In some embodiments, these agents also facilitate the effectiveness of a coating or eroding matrix. Exemplary diffusion facilitators/dispersing agents include, e.g., hydrophilic polymers, electrolytes, Tween ® 60 or 80, PEG, polyvinylpyrrolidone (PVP; commercially known as Plasdone®), and the carbohydrate- based dispersing agents such as, for example, hydroxypropyl celluloses (e.g., HPC, HPC-SL, and HPC-L), hydroxypropyl methylcelluloses (e.g., HPMC K100, HPMC K4M, HPMC K15M, and HPMC K100M), carboxymethylcellulose sodium, methylcellulose, hydroxyethylcellulose, hydroxypropylcellulose, hydroxypropylmethylcellulose phthalate, hydroxypropylmethylcellulose acetate stearate (HPMCAS),
noncrystalline cellulose, magnesium aluminum silicate, triethanolamine, polyvinyl alcohol (PVA), vinyl pyrrolidone/vinyl acetate copolymer (S630), 4-(1,1,3,3-tetramethylbutyl)-phenol polymer with ethylene oxide and formaldehyde (also known as tyloxapol), poloxamers (e.g., Pluronics F68®, F88®, and F108®, which are block copolymers of ethylene oxide and propylene oxide); and poloxamines (e.g., Tetronic 908®, also known as Poloxamine 908®, which is a tetrafunctional block copolymer derived from sequential addition of propylene oxide and ethylene oxide to ethylenediamine (BASF Corporation, Parsippany, N.J.)), polyvinylpyrrolidone K12, polyvinylpyrrolidone K17, polyvinylpyrrolidone K25, or polyvinylpyrrolidone K30, polyvinylpyrrolidone/vinyl acetate copolymer (S-630), polyethylene glycol, e.g., the polyethylene glycol can have a molecular weight of about 300 to about 6000, or about 3350 to about 4000, or about 7000 to about 5400, sodium carboxymethylcellulose, methylcellulose, polysorbate- 80, sodium alginate, gums, such as, e.g., gum tragacanth and gum acacia, guar gum, xanthans, including xanthan gum, sugars, cellulosics, such as, e.g., sodium carboxymethylcellulose, methylcellulose, sodium carboxymethylcellulose, polysorbate-80, sodium alginate, polyethoxylated sorbitan monolaurate, polyethoxylated sorbitan monolaurate, povidone, carbomers, polyvinyl alcohol (PVA), alginates, chitosans and combinations thereof. Plasticizcers such as cellulose or triethyl cellulose can also be used as dispersing agents. Dispersing agents particularly useful in liposomal dispersions and self-emulsifying dispersions are dimyristoyl phosphatidyl choline, natural phosphatidyl choline from eggs, natural phosphatidyl glycerol from eggs, cholesterol and isopropyl myristate. [00388] Combinations of one or more erosion facilitator with one or more diffusion facilitator can also be used in the present compositions. [00389] The term “diluent” refers to chemical compounds that are used to dilute the compound of interest prior to delivery. Diluents can also be used to stabilize compounds because they can provide a more stable environment. Salts dissolved in buffered solutions (which also can provide pH control or maintenance) are utilized as diluents in the art, including, but not limited to a phosphate buffered saline solution. In certain embodiments, diluents increase bulk of the composition to facilitate compression or create sufficient bulk for homogenous blend for capsule filling. Such compounds include e.g., lactose, starch, mannitol, sorbitol, dextrose, microcrystalline cellulose such as Avicel®; dibasic calcium phosphate, dicalcium phosphate dihydrate; tricalcium phosphate, calcium phosphate; anhydrous lactose, spray-dried lactose; pregelatinized starch, compressible sugar, such as Di-Pac® (Amstar); mannitol, hydroxypropylmethylcellulose, hydroxypropylmethylcellulose acetate stearate, sucrose-based diluents, confectioner’s sugar; monobasic calcium sulfate monohydrate, calcium sulfate dihydrate; calcium lactate trihydrate, dextrates; hydrolyzed cereal solids, amylose; powdered cellulose, calcium carbonate; glycine, kaolin; mannitol, sodium chloride; inositol, bentonite, and the like. [00390] The term “disintegrate” includes both the dissolution and dispersion of the dosage form when contacted with gastrointestinal fluid. “Disintegration agents or disintegrants” facilitate the breakup or disintegration of a substance. Examples of disintegration agents include a starch, e.g., a natural starch such as corn starch or potato starch, a pregelatinized starch such as National 1551 or Amijel®, or sodium starch glycolate such as Promogel® or Explotab®, a cellulose such as a wood product, methylcrystalline
cellulose, e.g., Avicel®, Avicel® PH101, Avicel® PH102, Avicel® PH105, Elcema® P100, Emcocel®, Vivacel®, Ming Tia®, and Solka-Floc®, methylcellulose, croscarmellose, or a cross-linked cellulose, such as cross-linked sodium carboxymethylcellulose (Ac-Di-Sol®), cross-linked carboxymethylcellulose, or cross-linked croscarmellose, a cross-linked starch such as sodium starch glycolate, a cross-linked polymer such as crosspovidone, a cross-linked polyvinylpyrrolidone, alginate such as alginic acid or a salt of alginic acid such as sodium alginate, a clay such as Veegum® HV (magnesium aluminum silicate), a gum such as agar, guar, locust bean, Karaya, pectin, or tragacanth, sodium starch glycolate, bentonite, a natural sponge, a surfactant, a resin such as a cation-exchange resin, citrus pulp, sodium lauryl sulfate, sodium lauryl sulfate in combination starch, and the like. [00391] “Drug absorption” or “absorption” typically refers to the process of movement of drug from site of administration of a drug across a barrier into a blood vessel or the site of action, e.g., a drug moving from the gastrointestinal tract into the portal vein or lymphatic system. [00392] An “enteric coating” is a substance that remains substantially intact in the stomach but dissolves and releases the drug in the small intestine or colon. Generally, the enteric coating comprises a polymeric material that prevents release in the low pH environment of the stomach but that ionizes at a higher pH, typically a pH of 6 to 7, and thus dissolves sufficiently in the small intestine or colon to release the active agent therein. [00393] “Erosion facilitators” include materials that control the erosion of a particular material in gastrointestinal fluid. Erosion facilitators are generally known to those of ordinary skill in the art. Exemplary erosion facilitators include, e.g., hydrophilic polymers, electrolytes, proteins, peptides, and amino acids. [00394] “Filling agents” include compounds such as lactose, calcium carbonate, calcium phosphate, dibasic calcium phosphate, calcium sulfate, microcrystalline cellulose, cellulose powder, dextrose, dextrates, dextran, starches, pregelatinized starch, sucrose, xylitol, lactitol, mannitol, sorbitol, sodium chloride, polyethylene glycol, and the like. [00395] “Flavoring agents” and/or “sweeteners” useful in the formulations described herein, include, e.g., acacia syrup, acesulfame K, alitame, anise, apple, aspartame, banana, Bavarian cream, berry, black currant, butterscotch, calcium citrate, camphor, caramel, cherry, cherry cream, chocolate, cinnamon, bubble gum, citrus, citrus punch, citrus cream, cotton candy, cocoa, cola, cool cherry, cool citrus, cyclamate, cylamate, dextrose, eucalyptus, eugenol, fructose, fruit punch, ginger, glycyrrhetinate, glycyrrhiza (licorice) syrup, grape, grapefruit, honey, isomalt, lemon, lime, lemon cream, monoammonium glyrrhizinate (MagnaSweet®), maltol, mannitol, maple, marshmallow, menthol, mint cream, mixed berry, neohesperidine DC, neotame, orange, pear, peach, peppermint, peppermint cream, Prosweet® Powder, raspberry, root beer, rum, saccharin, safrole, sorbitol, spearmint, spearmint cream, strawberry, strawberry cream, stevia, sucralose, sucrose, sodium saccharin, saccharin, aspartame, acesulfame potassium, mannitol, talin, sylitol, sucralose, sorbitol, Swiss cream, tagatose, tangerine, thaumatin, tutti fruitti, vanilla, walnut, watermelon, wild cherry, wintergreen, xylitol, or any combination of these flavoring ingredients, e.g., anise-menthol, cherry-anise, cinnamon-orange, cherry-cinnamon,
chocolate-mint, honey-lemon, lemon-lime, lemon-mint, menthol-eucalyptus, orange-cream, vanilla-mint, and mixtures thereof. [00396] “Lubricants” and “glidants” are compounds that prevent, reduce or inhibit adhesion or friction of materials. Exemplary lubricants include, e.g., stearic acid, calcium hydroxide, talc, sodium stearyl fumerate, a hydrocarbon such as mineral oil, or hydrogenated vegetable oil such as hydrogenated soybean oil (Sterotex®), higher fatty acids and their alkali-metal and alkaline earth metal salts, such as aluminum, calcium, magnesium, zinc, stearic acid, sodium stearates, glycerol, talc, waxes, Stearowet®, boric acid, sodium benzoate, sodium acetate, sodium chloride, leucine, a polyethylene glycol (e.g., PEG-4000) or a methoxypolyethylene glycol such as Carbowax™, sodium oleate, sodium benzoate, glyceryl behenate, polyethylene glycol, magnesium or sodium lauryl sulfate, colloidal silica such as Syloid™, Cab-O-Sil®, a starch such as corn starch, silicone oil, a surfactant, and the like. [00397] A “measurable serum concentration” or “measurable plasma concentration” describes the blood serum or blood plasma concentration, typically measured in mg, ^g, or ng of therapeutic agent per ml, dl, or l of blood serum, absorbed into the bloodstream after administration. As used herein, measurable plasma concentrations are typically measured in ng/ml or ^g/ml. [00398] “Pharmacodynamics” refers to the factors which determine the biologic response observed relative to the concentration of drug at a site of action. [00399] “Pharmacokinetics” refers to the factors which determine the attainment and maintenance of the appropriate concentration of drug at a site of action. [00400] “Plasticizers” are compounds used to soften the microencapsulation material or film coatings to make them less brittle. Suitable plasticizers include, e.g., polyethylene glycols such as PEG 300, PEG 400, PEG 600, PEG 1450, PEG 3350, and PEG 800, stearic acid, propylene glycol, oleic acid, triethyl cellulose and triacetin. In some embodiments, plasticizers can also function as dispersing agents or wetting agents. [00401] “Solubilizers” include compounds such as triacetin, triethylcitrate, ethyl oleate, ethyl caprylate, sodium lauryl sulfate, sodium doccusate, vitamin E TPGS, dimethylacetamide, N-methylpyrrolidone, N- hydroxyethylpyrrolidone, polyvinylpyrrolidone, hydroxypropylmethyl cellulose, hydroxypropyl cyclodextrins, ethanol, n-butanol, isopropyl alcohol, cholesterol, bile salts, polyethylene glycol 200-600, glycofurol, transcutol, propylene glycol, and dimethyl isosorbide and the like. [00402] “Stabilizers” include compounds such as any antioxidation agents, buffers, acids, preservatives and the like. [00403] “Steady state,” as used herein, is when the amount of drug administered is equal to the amount of drug eliminated within one dosing interval resulting in a plateau or constant plasma drug exposure. [00404] “Suspending agents” include compounds such as polyvinylpyrrolidone, e.g., polyvinylpyrrolidone K12, polyvinylpyrrolidone K17, polyvinylpyrrolidone K25, or polyvinylpyrrolidone K30, vinyl pyrrolidone/vinyl acetate copolymer (S630), polyethylene glycol, e.g., the polyethylene glycol can have a molecular weight of about 300 to about 6000, or about 3350 to about 4000, or about 7000 to about 5400, sodium carboxymethylcellulose, methylcellulose, hydroxypropylmethylcellulose,
hydroxymethylcellulose acetate stearate, polysorbate-80, hydroxyethylcellulose, sodium alginate, gums, such as, e.g., gum tragacanth and gum acacia, guar gum, xanthans, including xanthan gum, sugars, cellulosics, such as, e.g., sodium carboxymethylcellulose, methylcellulose, sodium carboxymethylcellulose, hydroxypropylmethylcellulose, hydroxyethylcellulose, polysorbate-80, sodium alginate, polyethoxylated sorbitan monolaurate, polyethoxylated sorbitan monolaurate, povidone and the like. [00405] “Surfactants” include compounds such as sodium lauryl sulfate, sodium docusate, Tween 60 or 80, triacetin, vitamin E TPGS, sorbitan monooleate, polyoxyethylene sorbitan monooleate, polysorbates, polaxomers, bile salts, glyceryl monostearate, copolymers of ethylene oxide and propylene oxide, e.g., Pluronic® (BASF), and the like. Some other surfactants include polyoxyethylene fatty acid glycerides and vegetable oils, e.g., polyoxyethylene (60) hydrogenated castor oil; and polyoxyethylene alkylethers and alkylphenyl ethers, e.g., octoxynol 10, octoxynol 40. In some embodiments, surfactants may be included to enhance physical stability or for other purposes. [00406] “Viscosity enhancing agents” include, e.g., methyl cellulose, xanthan gum, carboxymethyl cellulose, hydroxypropyl cellulose, hydroxypropylmethyl cellulose, hydroxypropylmethyl cellulose acetate stearate, hydroxypropylmethyl cellulose phthalate, carbomer, polyvinyl alcohol, alginates, acacia, chitosans and combinations thereof. [00407] “Wetting agents” include compounds such as oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, sodium docusate, sodium oleate, sodium lauryl sulfate, sodium doccusate, triacetin, Tween 80, vitamin E TPGS, ammonium salts and the like. Dosage Forms [00408] The compositions described herein can be formulated for administration to a subject via any conventional means including, but not limited to, oral, parenteral (e.g., intravenous, subcutaneous, or intramuscular), buccal, intranasal, rectal or transdermal administration routes. As used herein, the term “subject” is used to mean an animal, preferably a mammal, including a human or non-human. The terms patient and subject may be used interchangeably. [00409] Moreover, the pharmaceutical compositions described herein, which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) can be formulated into any suitable dosage form, including but not limited to, aqueous oral dispersions, liquids, gels, syrups, elixirs, slurries, suspensions and the like, for oral ingestion by a patient to be treated, solid oral dosage forms, aerosols, controlled release formulations, fast melt formulations, effervescent formulations, lyophilized formulations, tablets, powders, pills, dragees, capsules, delayed release formulations, extended release formulations, pulsatile release formulations, multiparticulate formulations, and mixed immediate release and controlled release formulations. [00410] Pharmaceutical preparations for oral use can be obtained by mixing one or more solid excipient with one or more of the compounds described herein, optionally grinding the resulting mixture, and processing the mixture of granules, after adding suitable auxiliaries, if desired, to obtain tablets or dragee
cores. Suitable excipients include, for example, fillers such as sugars, including lactose, sucrose, mannitol, or sorbitol; cellulose preparations such as, for example, maize starch, wheat starch, rice starch, potato starch, gelatin, gum tragacanth, methylcellulose, microcrystalline cellulose, hydroxypropylmethylcellulose, sodium carboxymethylcellulose; or others such as: polyvinylpyrrolidone (PVP or povidone) or calcium phosphate. If desired, disintegrating agents may be added, such as the cross-linked croscarmellose sodium, polyvinylpyrrolidone, agar, or alginic acid or a salt thereof such as sodium alginate. [00411] Dragee cores are provided with suitable coatings. For this purpose, concentrated sugar solutions may be used, which may optionally contain gum arabic, talc, polyvinylpyrrolidone, carbopol gel, polyethylene glycol, and/or titanium dioxide, lacquer solutions, and suitable organic solvents or solvent mixtures. Dyestuffs or pigments may be added to the tablets or dragee coatings for identification or to characterize different combinations of active compound doses. [00412] Pharmaceutical preparations which can be used orally include push-fit capsules made of gelatin, as well as soft, sealed capsules made of gelatin and a plasticizer, such as glycerol or sorbitol. The push-fit capsules can contain the active ingredients in admixture with filler such as lactose, binders such as starches, and/or lubricants such as talc or magnesium stearate and, optionally, stabilizers. In soft capsules, the active compounds may be dissolved or suspended in suitable liquids, such as fatty oils, liquid paraffin, or liquid polyethylene glycols. In addition, stabilizers may be added. All formulations for oral administration should be in dosages suitable for such administration. [00413] In some embodiments, the solid dosage forms disclosed herein may be in the form of a tablet, (including a suspension tablet, a fast-melt tablet, a bite-disintegration tablet, a rapid-disintegration tablet, an effervescent tablet, or a caplet), a pill, a powder (including a sterile packaged powder, a dispensable powder, or an effervescent powder) a capsule (including both soft or hard capsules, e.g., capsules made from animal-derived gelatin or plant-derived HPMC, or “sprinkle capsules”), solid dispersion, solid solution, bioerodible dosage form, controlled release formulations, pulsatile release dosage forms, multiparticulate dosage forms, pellets, granules, or an aerosol. In some embodiments, the pharmaceutical composition is in the form of a powder. In some embodiments, the pharmaceutical composition is in the form of a tablet, including but not limited to, a fast-melt tablet. Additionally, pharmaceutical compositions described herein may be administered as a single capsule or in multiple capsule dosage form. In some embodiments, the pharmaceutical composition is administered in two, or three, or four, capsules or tablets. [00414] In some embodiments, solid dosage forms, e.g., tablets, effervescent tablets, and capsules, are prepared by mixing particles of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) with one or more pharmaceutical excipients to form a bulk blend composition. When referring to these bulk blend compositions as homogeneous, it is meant that the particles of the compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5- Vd) are dispersed evenly throughout the composition so that the composition may be readily subdivided
into equally effective unit dosage forms, such as tablets, pills, and capsules. The individual unit dosages may also include film coatings, which disintegrate upon oral ingestion or upon contact with diluent. These formulations can be manufactured by conventional pharmacological techniques. [00415] Conventional pharmacological techniques include, e.g., one or a combination of methods: (1) dry mixing, (2) direct compression, (3) milling, (4) dry or non-aqueous granulation, (5) wet granulation, or (6) fusion. See, e.g., Lachman et al., The Theory and Practice of Industrial Pharmacy (1986). Other methods include, e.g., spray drying, pan coating, melt granulation, granulation, fluidized bed spray drying or coating (e.g., wurster coating), tangential coating, top spraying, tableting, extruding and the like. [00416] The pharmaceutical solid dosage forms described herein can include a compound described herein and one or more pharmaceutically acceptable additives such as a compatible carrier, binder, filling agent, suspending agent, flavoring agent, sweetening agent, disintegrating agent, dispersing agent, surfactant, lubricant, colorant, diluent, solubilizer, moistening agent, plasticizer, stabilizer, penetration enhancer, wetting agent, anti-foaming agent, antioxidant, preservative, or one or more combination thereof. In some embodiments, using standard coating procedures, such as those described in Remington’s Pharmaceutical Sciences, 20th Edition (2000), a film coating is provided around the formulation of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd). In some embodiments, some or all of the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are coated. In some embodiments, some or all of the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are microencapsulated. In still some embodiments, the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are not microencapsulated and are uncoated. [00417] Suitable carriers for use in the solid dosage forms described herein include, but are not limited to, acacia, gelatin, colloidal silicon dioxide, calcium glycerophosphate, calcium lactate, maltodextrin, glycerine, magnesium silicate, sodium caseinate, soy lecithin, sodium chloride, tricalcium phosphate, dipotassium phosphate, sodium stearoyl lactylate, carrageenan, monoglyceride, diglyceride, pregelatinized starch, hydroxypropylmethylcellulose, hydroxypropylmethylcellulose acetate stearate, sucrose, microcrystalline cellulose, lactose, mannitol and the like. [00418] Suitable filling agents for use in the solid dosage forms described herein include, but are not limited to, lactose, calcium carbonate, calcium phosphate, dibasic calcium phosphate, calcium sulfate, microcrystalline cellulose, cellulose powder, dextrose, dextrates, dextran, starches, pregelatinized starch, hydroxypropylmethycellulose (HPMC), hydroxypropylmethycellulose phthalate, hydroxypropylmethylcellulose acetate stearate (HPMCAS), sucrose, xylitol, lactitol, mannitol, sorbitol, sodium chloride, polyethylene glycol, and the like. [00419] In order to release the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) or a pharmaceutically acceptable salt thereof from a solid dosage form matrix as efficiently as possible, disintegrants are often used in the
formulation, especially when the dosage forms are compressed with binder. Disintegrants help rupturing the dosage form matrix by swelling or capillary action when moisture is absorbed into the dosage form. Suitable disintegrants for use in the solid dosage forms described herein include, but are not limited to, natural starch such as corn starch or potato starch, a pregelatinized starch such as National 1551 or Amijel®, or sodium starch glycolate such as Promogel® or Explotab®, a cellulose such as a wood product, methylcrystalline cellulose, e.g., Avicel®, Avicel® PH101, Avicel® PH102, Avicel® PH105, Elcema® P100, Emcocel®, Vivacel®, Ming Tia®, and Solka-Floc®, methylcellulose, croscarmellose, or a cross- linked cellulose, such as cross-linked sodium carboxymethylcellulose (Ac-Di-Sol®), cross-linked carboxymethylcellulose, or cross-linked croscarmellose, a cross-linked starch such as sodium starch glycolate, a cross-linked polymer such as crospovidone, a cross-linked polyvinylpyrrolidone, alginate such as alginic acid or a salt of alginic acid such as sodium alginate, a clay such as Veegum® HV (magnesium aluminum silicate), a gum such as agar, guar, locust bean, Karaya, pectin, or tragacanth, sodium starch glycolate, bentonite, a natural sponge, a surfactant, a resin such as a cation-exchange resin, citrus pulp, sodium lauryl sulfate, sodium lauryl sulfate in combination starch, and the like. [00420] Binders impart cohesiveness to solid oral dosage form formulations: for powder filled capsule formulation, they aid in plug formation that can be filled into soft or hard shell capsules and for tablet formulation, they ensure the tablet remaining intact after compression and help assure blend uniformity prior to a compression or fill step. Materials suitable for use as binders in the solid dosage forms described herein include, but are not limited to, carboxymethylcellulose, methylcellulose (e.g., Methocel®), hydroxypropylmethylcellulose (e.g. Hypromellose USP Pharmacoat-603, hydroxypropylmethylcellulose acetate stearate (Aqoate HS-LF and HS), hydroxyethylcellulose, hydroxypropylcellulose (e.g., Klucel®), ethylcellulose (e.g., Ethocel®), and microcrystalline cellulose (e.g., Avicel®), microcrystalline dextrose, amylose, magnesium aluminum silicate, polysaccharide acids, bentonites, gelatin, polyvinylpyrrolidone/vinyl acetate copolymer, crospovidone, povidone, starch, pregelatinized starch, tragacanth, dextrin, a sugar, such as sucrose (e.g., Dipac®), glucose, dextrose, molasses, mannitol, sorbitol, xylitol (e.g., Xylitab®), lactose, a natural or synthetic gum such as acacia, tragacanth, ghatti gum, mucilage of isapol husks, starch, polyvinylpyrrolidone (e.g., Povidone® CL, Kollidon® CL, Polyplasdone® XL-10, and Povidone® K-12), larch arabogalactan, Veegum®, polyethylene glycol, waxes, sodium alginate, and the like. [00421] In general, binder levels of 20-70% are used in powder-filled gelatin capsule formulations. Binder usage level in tablet formulations varies whether direct compression, wet granulation, roller compaction, or usage of other excipients such as fillers which itself can act as moderate binder. Formulators skilled in art can determine the binder level for the formulations, but binder usage level of up to 70% in tablet formulations is common. [00422] Suitable lubricants or glidants for use in the solid dosage forms described herein include, but are not limited to, stearic acid, calcium hydroxide, talc, corn starch, sodium stearyl fumerate, alkali-metal and alkaline earth metal salts, such as aluminum, calcium, magnesium, zinc, stearic acid, sodium stearates, magnesium stearate, zinc stearate, waxes, Stearowet®, boric acid, sodium benzoate, sodium acetate,
sodium chloride, leucine, a polyethylene glycol or a methoxypolyethylene glycol such as Carbowax™, PEG 4000, PEG 5000, PEG 6000, propylene glycol, sodium oleate, glyceryl behenate, glyceryl palmitostearate, glyceryl benzoate, magnesium or sodium lauryl sulfate, and the like. [00423] Suitable diluents for use in the solid dosage forms described herein include, but are not limited to, sugars (including lactose, sucrose, and dextrose), polysaccharides (including dextrates and maltodextrin), polyols (including mannitol, xylitol, and sorbitol), cyclodextrins and the like. [00424] The term “non water-soluble diluent” represents compounds typically used in the formulation of pharmaceuticals, such as calcium phosphate, calcium sulfate, starches, modified starches and microcrystalline cellulose, and microcellulose (e.g., having a density of about 0.45 g/cm3, e.g. Avicel, powdered cellulose), and talc. [00425] Suitable wetting agents for use in the solid dosage forms described herein include, for example, oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, quaternary ammonium compounds (e.g., Polyquat 10®), sodium oleate, sodium lauryl sulfate, magnesium stearate, sodium docusate, triacetin, vitamin E TPGS and the like. [00426] Suitable surfactants for use in the solid dosage forms described herein include, for example, sodium lauryl sulfate, sorbitan monooleate, polyoxyethylene sorbitan monooleate, polysorbates, polaxomers, bile salts, glyceryl monostearate, copolymers of ethylene oxide and propylene oxide, e.g., Pluronic® (BASF), and the like. [00427] Suitable suspending agents for use in the solid dosage forms described here include, but are not limited to, polyvinylpyrrolidone, e.g., polyvinylpyrrolidone K12, polyvinylpyrrolidone K17, polyvinylpyrrolidone K25, or polyvinylpyrrolidone K30, polyethylene glycol, e.g., the polyethylene glycol can have a molecular weight of about 300 to about 6000, or about 3350 to about 4000, or about 7000 to about 5400, vinyl pyrrolidone/vinyl acetate copolymer (S630), sodium carboxymethylcellulose, methylcellulose, hydroxy-propylmethylcellulose, polysorbate-80, hydroxyethylcellulose, sodium alginate, gums, such as, e.g., gum tragacanth and gum acacia, guar gum, xanthans, including xanthan gum, sugars, cellulosics, such as, e.g., sodium carboxymethylcellulose, methylcellulose, sodium carboxymethylcellulose, hydroxypropylmethylcellulose, hydroxyethylcellulose, polysorbate-80, sodium alginate, polyethoxylated sorbitan monolaurate, polyethoxylated sorbitan monolaurate, povidone and the like. [00428] Suitable antioxidants for use in the solid dosage forms described herein include, for example, e.g., butylated hydroxytoluene (BHT), sodium ascorbate, and tocopherol. [00429] It should be appreciated that there is considerable overlap between additives used in the solid dosage forms described herein. Thus, the above-listed additives should be taken as merely exemplary, and not limiting, of the types of additives that can be included in solid dosage forms described herein. The amounts of such additives can be readily determined by one skilled in the art, according to the particular properties desired.
[00430] In some embodiments, one or more layers of the pharmaceutical composition are plasticized. Illustratively, a plasticizer is generally a high boiling point solid or liquid. Suitable plasticizers can be added from about 0.01% to about 50% by weight (w/w) of the coating composition. Plasticizers include, but are not limited to, diethyl phthalate, citrate esters, polyethylene glycol, glycerol, acetylated glycerides, triacetin, polypropylene glycol, polyethylene glycol, triethyl citrate, dibutyl sebacate, stearic acid, stearol, stearate, and castor oil. [00431] Compressed tablets are solid dosage forms prepared by compacting the bulk blend of the formulations described above. In various embodiments, compressed tablets which are designed to dissolve in the mouth will include one or more flavoring agents. In some embodiments, the compressed tablets will include a film surrounding the final compressed tablet. In some embodiments, the film coating can provide a delayed release of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd)from the formulation. In some embodiments, the film coating aids in patient compliance (e.g., Opadry® coatings or sugar coating). Film coatings including Opadry® typically range from about 1% to about 3% of the tablet weight. In some embodiments, the compressed tablets include one or more excipients. [00432] A capsule may be prepared, for example, by placing the bulk blend of the formulation of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) described above, inside of a capsule. In some embodiments, the formulations (non-aqueous suspensions and solutions) are placed in a soft gelatin capsule. In some embodiments, the formulations are placed in standard gelatin capsules or non-gelatin capsules such as capsules comprising HPMC. In some embodiments, the formulation is placed in a sprinkle capsule, wherein the capsule may be swallowed whole or the capsule may be opened and the contents sprinkled on food prior to eating. In some embodiments, the therapeutic dose is split into multiple (e.g., two, three, or four) capsules. In some embodiments, the entire dose of the formulation is delivered in a capsule form. [00433] In various embodiments, the particles of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) and one or more excipients are dry blended and compressed into a mass, such as a tablet, having a hardness sufficient to provide a pharmaceutical composition that substantially disintegrates within less than about 30 minutes, less than about 35 minutes, less than about 40 minutes, less than about 45 minutes, less than about 50 minutes, less than about 55 minutes, or less than about 60 minutes, after oral administration, thereby releasing the formulation into the gastrointestinal fluid. [00434] In some embodiments, dosage forms may include microencapsulated formulations. In some embodiments, one or more other compatible materials are present in the microencapsulation material. Exemplary materials include, but are not limited to, pH modifiers, erosion facilitators, anti-foaming agents, antioxidants, flavoring agents, and carrier materials such as binders, suspending agents, disintegration agents, filling agents, surfactants, solubilizers, stabilizers, lubricants, wetting agents, and diluents.
[00435] Materials useful for the microencapsulation described herein include materials compatible with compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) which sufficiently isolate the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) from other non-compatible excipients. Materials compatible with compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are those that delay the release of the compounds of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) in vivo. [00436] Exemplary microencapsulation materials useful for delaying the release of the formulations including compounds described herein, include, but are not limited to, hydroxypropyl cellulose ethers (HPC) such as Klucel® or Nisso HPC, low-substituted hydroxypropyl cellulose ethers (L-HPC), hydroxypropyl methyl cellulose ethers (HPMC) such as Seppifilm-LC, Pharmacoat®, Metolose SR, Methocel®-E, Opadry YS, PrimaFlo, Benecel MP824, and Benecel MP843, methylcellulose polymers such as Methocel®-A, hydroxypropylmethylcellulose acetate stearate Aqoat (HF-LS, HF-LG,HF-MS) and Metolose®, Ethylcelluloses (EC) and mixtures thereof such as E461, Ethocel®, Aqualon®-EC, Surelease®, Polyvinyl alcohol (PVA) such as Opadry AMB, hydroxyethylcelluloses such as Natrosol®, carboxymethylcelluloses and salts of carboxymethylcelluloses (CMC) such as Aqualon®-CMC, polyvinyl alcohol and polyethylene glycol co-polymers such as Kollicoat IR®, monoglycerides (Myverol), triglycerides (KLX), polyethylene glycols, modified food starch, acrylic polymers and mixtures of acrylic polymers with cellulose ethers such as Eudragit® EPO, Eudragit® L30D-55, Eudragit® FS 30D Eudragit® L100-55, Eudragit® L100, Eudragit® S100, Eudragit® RD100, Eudragit® E100, Eudragit® L12.5, Eudragit® S12.5, Eudragit® NE30D, and Eudragit® NE 40D, cellulose acetate phthalate, sepifilms such as mixtures of HPMC and stearic acid, cyclodextrins, and mixtures of these materials. [00437] In some embodiments, plasticizers such as polyethylene glycols, e.g., PEG 300, PEG 400, PEG 600, PEG 1450, PEG 3350, and PEG 800, stearic acid, propylene glycol, oleic acid, and triacetin are incorporated into the microencapsulation material. In some embodiments, the microencapsulating material useful for delaying the release of the pharmaceutical compositions is from the USP or the National Formulary (NF). In some embodiments, the microencapsulation material is Klucel. In some embodiments, the microencapsulation material is methocel. [00438] Microencapsulated compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be formulated by methods known by one of ordinary skill in the art. Such known methods include, e.g., spray drying processes, spinning disk-solvent processes, hot melt processes, spray chilling methods, fluidized bed, electrostatic deposition, centrifugal extrusion, rotational suspension separation, polymerization at liquid-gas or solid- gas interface, pressure extrusion, or spraying solvent extraction bath. In addition to these, several chemical techniques, e.g., complex coacervation, solvent evaporation, polymer-polymer incompatibility, interfacial polymerization in liquid media, in situ polymerization, in-liquid drying, and desolvation in liquid media
could also be used. Furthermore, other methods such as roller compaction, extrusion/spheronization, coacervation, or nanoparticle coating may also be used. [00439] In some embodiments, the particles of compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are microencapsulated prior to being formulated into one of the above forms. In still some embodiments, some or most of the particles are coated prior to being further formulated by using standard coating procedures, such as those described in Remington’s Pharmaceutical Sciences, 20th Edition (2000). [00440] In some embodiments, the solid dosage formulations of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) are plasticized (coated) with one or more layers. Illustratively, a plasticizer is generally a high boiling point solid or liquid. Suitable plasticizers can be added from about 0.01% to about 50% by weight (w/w) of the coating composition. Plasticizers include, but are not limited to, diethyl phthalate, citrate esters, polyethylene glycol, glycerol, acetylated glycerides, triacetin, polypropylene glycol, polyethylene glycol, triethyl citrate, dibutyl sebacate, stearic acid, stearol, stearate, and castor oil. [00441] In some embodiments, a powder including the formulations with a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein, may be formulated to include one or more pharmaceutical excipients and flavors. Such a powder may be prepared, for example, by mixing the formulation and optional pharmaceutical excipients to form a bulk blend composition. Additional embodiments also include a suspending agent and/or a wetting agent. This bulk blend is uniformly subdivided into unit dosage packaging or multi-dosage packaging units. [00442] In still some embodiments, effervescent powders are also prepared in accordance with the present disclosure. Effervescent salts have been used to disperse medicines in water for oral administration. Effervescent salts are granules or coarse powders containing a medicinal agent in a dry mixture, usually composed of sodium bicarbonate, citric acid, and/or tartaric acid. When salts of the compositions described herein are added to water, the acids and the base react to liberate carbon dioxide gas, thereby causing “effervescence.” Examples of effervescent salts include, e.g., the following ingredients: sodium bicarbonate or a mixture of sodium bicarbonate and sodium carbonate, citric acid and/or tartaric acid. Any acid-base combination that results in the liberation of carbon dioxide can be used in place of the combination of sodium bicarbonate and citric and tartaric acids, as long as the ingredients were suitable for pharmaceutical use and result in a pH of about 6.0 or higher. [00443] In some embodiments, the formulations described herein, which include a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are solid dispersions. Methods of producing such solid dispersions are known in the art and include, but are not limited to, for example, U.S. Pat. Nos. 4,343,789, 5,340,591, 5,456,923, 5,700,485, 5,723,269, and U.S. Pub. Appl 2004/0013734, each of which is specifically incorporated by reference. In some embodiments, the formulations described herein are solid solutions. Solid solutions incorporate a substance together with the active agent and other excipients such that heating the mixture results in
dissolution of the drug and the resulting composition is then cooled to provide a solid blend which can be further formulated or directly added to a capsule or compressed into a tablet. Methods of producing such solid solutions are known in the art and include, but are not limited to, for example, U.S. Pat. Nos. 4,151,273, 5,281,420, and 6,083,518, each of which is specifically incorporated by reference. [00444] The pharmaceutical solid oral dosage forms including formulations described herein, which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd), can be further formulated to provide a controlled release of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd). Controlled release refers to the release of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) from a dosage form in which it is incorporated according to a desired profile over an extended period of time. Controlled release profiles include, for example, sustained release, prolonged release, pulsatile release, and delayed release profiles. In contrast to immediate release compositions, controlled release compositions allow delivery of an agent to a subject over an extended period of time according to a predetermined profile. Such release rates can provide therapeutically effective levels of agent for an extended period of time and thereby provide a longer period of pharmacologic response while minimizing side effects as compared to conventional rapid release dosage forms. Such longer periods of response provide for many inherent benefits that are not achieved with the corresponding short acting, immediate release preparations. [00445] In some embodiments, the solid dosage forms described herein can be formulated as enteric coated delayed release oral dosage forms, i.e., as an oral dosage form of a pharmaceutical composition as described herein which utilizes an enteric coating to affect release in the small intestine of the gastrointestinal tract. The enteric coated dosage form may be a compressed or molded or extruded tablet/mold (coated or uncoated) containing granules, powder, pellets, beads or particles of the active ingredient and/or other composition components, which are themselves coated or uncoated. The enteric coated oral dosage form may also be a capsule (coated or uncoated) containing pellets, beads or granules of the solid carrier or the composition, which are themselves coated or uncoated. [00446] The term “delayed release” as used herein refers to the delivery so that the release can be accomplished at some generally predictable location in the intestinal tract more distal to that which would have been accomplished if there had been no delayed release alterations. In some embodiments the method for delay of release is coating. Any coatings should be applied to a sufficient thickness such that the entire coating does not dissolve in the gastrointestinal fluids at pH below about 5, but does dissolve at pH about 5 and above. It is expected that any anionic polymer exhibiting a pH-dependent solubility profile can be used as an enteric coating in the methods and compositions described herein to achieve delivery to the lower gastrointestinal tract. In some embodiments the polymers described herein are anionic carboxylic polymers. In some embodiments, the polymers and compatible mixtures thereof, and some of their properties, include, but are not limited to:
[00447] Shellac, also called purified lac, a refined product obtained from the resinous secretion of an insect. This coating dissolves in media of pH >7; [00448] Acrylic polymers. The performance of acrylic polymers (primarily their solubility in biological fluids) can vary based on the degree and type of substitution. Examples of suitable acrylic polymers include methacrylic acid copolymers and ammonium methacrylate copolymers. The Eudragit series E, L, S, RL, RS, and NE (Rohm Pharma) are available as solubilized in organic solvent, aqueous dispersion, or dry powders. The Eudragit series RL, NE, and RS are insoluble in the gastrointestinal tract but are permeable and are used primarily for colonic targeting. The Eudragit series E dissolve in the stomach. The Eudragit series L, L-30D and S are insoluble in stomach and dissolve in the intestine; [00449] Cellulose Derivatives. Examples of suitable cellulose derivatives are: ethyl cellulose; reaction mixtures of partial acetate esters of cellulose with phthalic anhydride. The performance can vary based on the degree and type of substitution. Cellulose acetate phthalate (CAP) dissolves in pH >6. Aquateric (FMC) is an aqueous based system and is a spray dried CAP psuedolatex with particles <1 μm. Other components in Aquateric can include pluronics, Tweens, and acetylated monoglycerides. Other suitable cellulose derivatives include: cellulose acetate trimellitate (Eastman); methylcellulose (Pharmacoat, Methocel); hydroxypropylmethyl cellulose phthalate (HPMCP); hydroxypropylmethyl cellulose succinate (HPMCS); and hydroxypropylmethylcellulose acetate succinate (e.g., AQOAT (Shin Etsu)). The performance can vary based on the degree and type of substitution. For example, HPMCP such as, HP-50, HP-55, HP-55S, HP-55F grades are suitable. The performance can vary based on the degree and type of substitution. For example, suitable grades of hydroxypropylmethylcellulose acetate succinate include, but are not limited to, AS-LG (LF), which dissolves at pH 5, AS-MG (MF), which dissolves at pH 5.5, and AS-HG (HF), which dissolves at higher pH. These polymers are offered as granules, or as fine powders for aqueous dispersions; [00450] Poly Vinyl Acetate Phthalate (PVAP). PVAP dissolves in pH >5, and it is much less permeable to water vapor and gastric fluids. [00451] In some embodiments, the coating can, and usually does, contain a plasticizer and possibly other coating excipients such as colorants, talc, and/or magnesium stearate, which are well known in the art. Suitable plasticizers include triethyl citrate (Citroflex 2), triacetin (glyceryl triacetate), acetyl triethyl citrate (Citroflec A2), Carbowax 400 (polyethylene glycol 400), diethyl phthalate, tributyl citrate, acetylated monoglycerides, glycerol, fatty acid esters, propylene glycol, and dibutyl phthalate. In particular, anionic carboxylic acrylic polymers usually will contain 10-25% by weight of a plasticizer, especially dibutyl phthalate, polyethylene glycol, triethyl citrate, and triacetin. Conventional coating techniques such as spray or pan coating are employed to apply coatings. The coating thickness must be sufficient to ensure that the oral dosage form remains intact until the desired site of topical delivery in the intestinal tract is reached. [00452] Colorants, detackifiers, surfactants, antifoaming agents, lubricants (e.g., carnuba wax or PEG) may be added to the coatings besides plasticizers to solubilize or disperse the coating material, and to improve coating performance and the coated product.
[00453] In some embodiments, the formulations described herein, which include a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) are delivered using a pulsatile dosage form. A pulsatile dosage form is capable of providing one or more immediate release pulses at predetermined time points after a controlled lag time or at specific sites. Pulsatile dosage forms including the formulations described herein, which include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be administered using a variety of pulsatile formulations known in the art. For example, such formulations include, but are not limited to, those described in U.S. Pat. Nos. 5,011,692, 5,017,381, 5,229,135, and 5,840,329, each of which is specifically incorporated by reference. Other pulsatile release dosage forms suitable for use with the present formulations include, but are not limited to, for example, U.S. Pat. Nos. 4,871,549, 5,260,068, 5,260,069, 5,508,040, 5,567,441 and 5,837,284, all of which are specifically incorporated by reference. In some embodiments, the controlled release dosage form is pulsatile release solid oral dosage form including at least two groups of particles, (i.e. multiparticulate) each containing the formulation described herein. The first group of particles provides a substantially immediate dose of the compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) upon ingestion by a mammal. The first group of particles can be either uncoated or include a coating and/or sealant. The second group of particles includes coated particles, which includes from about 2% to about 75%, from about 2.5% to about 70%, or from about 40% to about 70%, by weight of the total dose of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) in said formulation, in admixture with one or more binders. The coating includes a pharmaceutically acceptable ingredient in an amount sufficient to provide a delay of from about 2 hours to about 7 hours following ingestion before release of the second dose. Suitable coatings include one or more differentially degradable coatings such as, by way of example only, pH sensitive coatings (enteric coatings) such as acrylic resins (e.g., Eudragit® EPO, Eudragit® L30D-55, Eudragit® FS 30D Eudragit® L100-55, Eudragit® L100, Eudragit® S100, Eudragit® RD100, Eudragit® E100, Eudragit® L12.5, Eudragit® S12.5, and Eudragit® NE30D, Eudragit® NE 40D® ) either alone or blended with cellulose derivatives, e.g., ethylcellulose, or non-enteric coatings having variable thickness to provide differential release of the formulation that includes a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd). [00454] Many other types of controlled release systems known to those of ordinary skill in the art and are suitable for use with the formulations described herein. Examples of such delivery systems include, e.g., polymer-based systems, such as polylactic and polyglycolic acid, plyanhydrides and polycaprolactone; porous matrices, nonpolymer-based systems that are lipids, including sterols, such as cholesterol, cholesterol esters and fatty acids, or neutral fats, such as mono-, di- and triglycerides; hydrogel release systems; silastic systems; peptide-based systems; wax coatings, bioerodible dosage forms, compressed tablets using conventional binders and the like. See, e.g., Liberman et al., Pharmaceutical Dosage Forms, 2 Ed., Vol. 1, pp. 209-214 (1990); Singh et al., Encyclopedia of Pharmaceutical Technology, 2nd Ed., pp.
751-753 (2002); U.S. Pat. Nos.4,327,725, 4,624,848, 4,968,509, 5,461,140, 5,456,923, 5,516,527, 5,622,721, 5,686,105, 5,700,410, 5,977,175, 6,465,014, and 6,932,983, each of which is specifically incorporated by reference. [00455] In some embodiments, pharmaceutical compositions are provided that include particles of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein and at least one dispersing agent or suspending agent for oral administration to a subject. The formulations may be a powder and/or granules for suspension, and upon admixture with water, a substantially uniform suspension is obtained. [00456] Liquid formulation dosage forms for oral administration can be aqueous suspensions selected from the group including, but not limited to, pharmaceutically acceptable aqueous oral dispersions, emulsions, solutions, elixirs, gels, and syrups. See, e.g., Singh et al., Encyclopedia of Pharmaceutical Technology, 2nd Ed., pp.754-757 (2002). In addition to the particles of a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) the liquid dosage forms may include additives, such as: (a) disintegrating agents; (b) dispersing agents; (c) wetting agents; (d) at least one preservative, (e) viscosity enhancing agents, (f) at least one sweetening agent, and (g) at least one flavoring agent. In some embodiments, the aqueous dispersions can further include a crystalline inhibitor. [00457] The aqueous suspensions and dispersions described herein can remain in a homogenous state, as defined in The USP Pharmacists’ Pharmacopeia (2005 edition, chapter 905), for at least 4 hours. The homogeneity should be determined by a sampling method consistent with regard to determining homogeneity of the entire composition. In some embodiments, an aqueous suspension can be re- suspended into a homogenous suspension by physical agitation lasting less than 1 minute. In some embodiments, an aqueous suspension can be re-suspended into a homogenous suspension by physical agitation lasting less than 45 seconds. In yet some embodiments, an aqueous suspension can be re- suspended into a homogenous suspension by physical agitation lasting less than 30 seconds. In still some embodiments, no agitation is necessary to maintain a homogeneous aqueous dispersion. [00458] Examples of disintegrating agents for use in the aqueous suspensions and dispersions include, but are not limited to, a starch, e.g., a natural starch such as corn starch or potato starch, a pregelatinized starch such as National 1551 or Amijel®, or sodium starch glycolate such as Promogel® or Explotab®; a cellulose such as a wood product, methylcrystalline cellulose, e.g., Avicel®, Avicel® PH101, Avicel® PH102, Avicel® PH105, Elcema® P100, Emcocel®, Vivacel®, Ming Tia®, and Solka-Floc®, methylcellulose, croscarmellose, or a cross-linked cellulose, such as cross-linked sodium carboxymethylcellulose (Ac-Di-Sol®), cross-linked carboxymethylcellulose, or cross-linked croscarmellose; a cross-linked starch such as sodium starch glycolate; a cross-linked polymer such as crospovidone; a cross-linked polyvinylpyrrolidone; alginate such as alginic acid or a salt of alginic acid such as sodium alginate; a clay such as Veegum® HV (magnesium aluminum silicate); a gum such as agar, guar, locust bean, Karaya, pectin, or tragacanth; sodium starch glycolate; bentonite; a natural
sponge; a surfactant; a resin such as a cation-exchange resin; citrus pulp; sodium lauryl sulfate; sodium lauryl sulfate in combination starch; and the like. [00459] In some embodiments, the dispersing agents suitable for the aqueous suspensions and dispersions described herein are known in the art and include, for example, hydrophilic polymers, electrolytes, Tween ® 60 or 80, PEG, polyvinylpyrrolidone (PVP; commercially known as Plasdone®), and the carbohydrate- based dispersing agents such as, for example, hydroxypropylcellulose and hydroxypropyl cellulose ethers (e.g., HPC, HPC-SL, and HPC-L), hydroxypropyl methylcellulose and hydroxypropyl methylcellulose ethers (e.g. HPMC K100, HPMC K4M, HPMC K15M, and HPMC K100M), carboxymethylcellulose sodium, methylcellulose, hydroxyethylcellulose, hydroxypropylmethyl-cellulose phthalate, hydroxypropylmethyl-cellulose acetate stearate, noncrystalline cellulose, magnesium aluminum silicate, triethanolamine, polyvinyl alcohol (PVA), polyvinylpyrrolidone/vinyl acetate copolymer (Plasdone®, e.g., S-630), 4-(1,1,3,3-tetramethylbutyl)-phenol polymer with ethylene oxide and formaldehyde (also known as tyloxapol), poloxamers (e.g., Pluronics F68®, F88®, and F108®, which are block copolymers of ethylene oxide and propylene oxide); and poloxamines (e.g., Tetronic 908®, also known as Poloxamine 908®, which is a tetrafunctional block copolymer derived from sequential addition of propylene oxide and ethylene oxide to ethylenediamine (BASF Corporation, Parsippany, N.J.)). In some embodiments, the dispersing agent is selected from a group not comprising one of the following agents: hydrophilic polymers; electrolytes; Tween ® 60 or 80; PEG; polyvinylpyrrolidone (PVP); hydroxypropylcellulose and hydroxypropyl cellulose ethers (e.g., HPC, HPC-SL, and HPC-L); hydroxypropyl methylcellulose and hydroxypropyl methylcellulose ethers (e.g. HPMC K100, HPMC K4M, HPMC K15M, HPMC K100M, and Pharmacoat® USP 2910 (Shin-Etsu)); carboxymethylcellulose sodium; methylcellulose; hydroxyethylcellulose; hydroxypropylmethyl-cellulose phthalate; hydroxypropylmethyl-cellulose acetate stearate; non-crystalline cellulose; magnesium aluminum silicate; triethanolamine; polyvinyl alcohol (PVA); 4-(1,1,3,3-tetramethylbutyl)-phenol polymer with ethylene oxide and formaldehyde; poloxamers (e.g., Pluronics F68®, F88®, and F108®, which are block copolymers of ethylene oxide and propylene oxide); or poloxamines (e.g., Tetronic 908®, also known as Poloxamine 908®). [00460] Wetting agents suitable for the aqueous suspensions and dispersions described herein are known in the art and include, but are not limited to, cetyl alcohol, glycerol monostearate, polyoxyethylene sorbitan fatty acid esters (e.g., the commercially available Tweens® such as e.g., Tween 20® and Tween 80® (ICI Specialty Chemicals)), and polyethylene glycols (e.g., Carbowaxs 3350® and 1450®, and Carbopol 934® (Union Carbide)), oleic acid, glyceryl monostearate, sorbitan monooleate, sorbitan monolaurate, triethanolamine oleate, polyoxyethylene sorbitan monooleate, polyoxyethylene sorbitan monolaurate, sodium oleate, sodium lauryl sulfate, sodium docusate, triacetin, vitamin E TPGS, sodium taurocholate, simethicone, phosphotidylcholine and the like [00461] Suitable preservatives for the aqueous suspensions or dispersions described herein include, for example, potassium sorbate, parabens (e.g., methylparaben and propylparaben), benzoic acid and its salts, other esters of parahydroxybenzoic acid such as butylparaben, alcohols such as ethyl alcohol or benzyl alcohol, phenolic compounds such as phenol, or quaternary compounds such as benzalkonium chloride.
Preservatives, as used herein, are incorporated into the dosage form at a concentration sufficient to inhibit microbial growth. [00462] Suitable viscosity enhancing agents for the aqueous suspensions or dispersions described herein include, but are not limited to, methyl cellulose, xanthan gum, carboxymethyl cellulose, hydroxypropyl cellulose, hydroxypropylmethyl cellulose, Plasdon® S-630, carbomer, polyvinyl alcohol, alginates, acacia, chitosans and combinations thereof. The concentration of the viscosity enhancing agent will depend upon the agent selected and the viscosity desired. [00463] Examples of sweetening agents suitable for the aqueous suspensions or dispersions described herein include, for example, acacia syrup, acesulfame K, alitame, anise, apple, aspartame, banana, Bavarian cream, berry, black currant, butterscotch, calcium citrate, camphor, caramel, cherry, cherry cream, chocolate, cinnamon, bubble gum, citrus, citrus punch, citrus cream, cotton candy, cocoa, cola, cool cherry, cool citrus, cyclamate, cylamate, dextrose, eucalyptus, eugenol, fructose, fruit punch, ginger, glycyrrhetinate, glycyrrhiza (licorice) syrup, grape, grapefruit, honey, isomalt, lemon, lime, lemon cream, monoammonium glyrrhizinate (MagnaSweet®), maltol, mannitol, maple, marshmallow, menthol, mint cream, mixed berry, neohesperidine DC, neotame, orange, pear, peach, peppermint, peppermint cream, Prosweet® Powder, raspberry, root beer, rum, saccharin, safrole, sorbitol, spearmint, spearmint cream, strawberry, strawberry cream, stevia, sucralose, sucrose, sodium saccharin, saccharin, aspartame, acesulfame potassium, mannitol, talin, sucralose, sorbitol, swiss cream, tagatose, tangerine, thaumatin, tutti fruitti, vanilla, walnut, watermelon, wild cherry, wintergreen, xylitol, or any combination of these flavoring ingredients, e.g., anise-menthol, cherry-anise, cinnamon-orange, cherry-cinnamon, chocolate- mint, honey-lemon, lemon-lime, lemon-mint, menthol-eucalyptus, orange-cream, vanilla-mint, and mixtures thereof. In some embodiments, the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.001% to about 1.0% the volume of the aqueous dispersion. In some embodiments, the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.005% to about 0.5% the volume of the aqueous dispersion. In yet some embodiments, the aqueous liquid dispersion can comprise a sweetening agent or flavoring agent in a concentration ranging from about 0.01% to about 1.0% the volume of the aqueous dispersion. [00464] In addition to the additives listed above, the liquid formulations can also include inert diluents commonly used in the art, such as water or other solvents, solubilizing agents, and emulsifiers. Exemplary emulsifiers are ethyl alcohol, isopropyl alcohol, ethyl carbonate, ethyl acetate, benzyl alcohol, benzyl benzoate, propyleneglycol, 1,3-butyleneglycol, dimethylformamide, sodium lauryl sulfate, sodium doccusate, cholesterol, cholesterol esters, taurocholic acid, phosphotidylcholine, oils, such as cottonseed oil, groundnut oil, corn germ oil, olive oil, castor oil, and sesame oil, glycerol, tetrahydrofurfuryl alcohol, polyethylene glycols, fatty acid esters of sorbitan, or mixtures of these substances, and the like. [00465] In some embodiments, the pharmaceutical compositions described herein can be self-emulsifying drug delivery systems (SEDDS). Emulsions are dispersions of one immiscible phase in another, usually in the form of droplets. Generally, emulsions are created by vigorous mechanical dispersion. SEDDS, as
opposed to emulsions or microemulsions, spontaneously form emulsions when added to an excess of water without any external mechanical dispersion or agitation. An advantage of SEDDS is that only gentle mixing is required to distribute the droplets throughout the solution. Additionally, water or the aqueous phase can be added just prior to administration, which ensures stability of an unstable or hydrophobic active ingredient. Thus, the SEDDS provides an effective delivery system for oral and parenteral delivery of hydrophobic active ingredients. SEDDS may provide improvements in the bioavailability of hydrophobic active ingredients. Methods of producing self-emulsifying dosage forms are known in the art and include, but are not limited to, for example, U.S. Pat. Nos.5,858,401, 6,667,048, and 6,960,563, each of which is specifically incorporated by reference. [00466] It is to be appreciated that there is overlap between the above-listed additives used in the aqueous dispersions or suspensions described herein, since a given additive is often classified differently by different practitioners in the field, or is commonly used for any of several different functions. Thus, the above-listed additives should be taken as merely exemplary, and not limiting, of the types of additives that can be included in formulations described herein. The amounts of such additives can be readily determined by one skilled in the art, according to the particular properties desired. Intranasal Formulations [00467] Intranasal formulations are known in the art and are described in, for example, U.S. Pat. Nos. 4,476,116, 5,116,817, and 6,391,452, each of which is specifically incorporated by reference. Formulations that include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) which are prepared according to these and other techniques well-known in the art are prepared as solutions in saline, employing benzyl alcohol or other suitable preservatives, fluorocarbons, and/or other solubilizing or dispersing agents known in the art. See, for example, Ansel, H. C. et al., Pharmaceutical Dosage Forms and Drug Delivery Systems, Sixth Ed. (1995). Preferably these compositions and formulations are prepared with suitable nontoxic pharmaceutically acceptable ingredients. These ingredients are known to those skilled in the preparation of nasal dosage forms and some of these can be found in REMINGTON: THE SCIENCE AND PRACTICE OF PHARMACY, 21st edition, 2005, a standard reference in the field. The choice of suitable carriers is highly dependent upon the exact nature of the nasal dosage form desired, e.g., solutions, suspensions, ointments, or gels. Nasal dosage forms generally contain large amounts of water in addition to the active ingredient. Minor amounts of other ingredients such as pH adjusters, emulsifiers or dispersing agents, preservatives, surfactants, gelling agents, or buffering and other stabilizing and solubilizing agents may also be present. The nasal dosage form should be isotonic with nasal secretions. [00468] For administration by inhalation, the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein may be in a form as an aerosol, a mist or a powder. Pharmaceutical compositions described herein are conveniently delivered in the form of an aerosol spray presentation from pressurized packs or a nebuliser, with the use of a suitable propellant, e.g., dichlorodifluoromethane, trichlorofluoromethane, dichlorotetrafluoroethane, carbon dioxide or other suitable gas. In the case of a pressurized aerosol, the
dosage unit may be determined by providing a valve to deliver a metered amount. Capsules and cartridges of, such as, by way of example only, gelatin for use in an inhaler or insufflator may be formulated containing a powder mix of the compound described herein and a suitable powder base such as lactose or starch. Buccal Formulations [00469] Buccal formulations that include compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) may be administered using a variety of formulations known in the art. For example, such formulations include, but are not limited to, U.S. Pat. Nos. 4,229,447, 4,596,795, 4,755,386, and 5,739,136, each of which is specifically incorporated by reference. In addition, the buccal dosage forms described herein can further include a bioerodible (hydrolysable) polymeric carrier that also serves to adhere the dosage form to the buccal mucosa. The buccal dosage form is fabricated so as to erode gradually over a predetermined time period, wherein the delivery of the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) is provided essentially throughout. Buccal drug delivery, as will be appreciated by those skilled in the art, avoids the disadvantages encountered with oral drug administration, e.g., slow absorption, degradation of the active agent by fluids present in the gastrointestinal tract and/or first-pass inactivation in the liver. With regard to the bioerodible (hydrolysable) polymeric carrier, it will be appreciated that virtually any such carrier can be used, so long as the desired drug release profile is not compromised, and the carrier is compatible with the compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) and any other components that may be present in the buccal dosage unit. Generally, the polymeric carrier comprises hydrophilic (water-soluble and water- swellable) polymers that adhere to the wet surface of the buccal mucosa. Examples of polymeric carriers useful herein include acrylic acid polymers and co, e.g., those known as “carbomers” (Carbopol®, which may be obtained from B.F. Goodrich, is one such polymer). Other components may also be incorporated into the buccal dosage forms described herein include, but are not limited to, disintegrants, diluents, binders, lubricants, flavoring, colorants, preservatives, and the like. For buccal or sublingual administration, the compositions may take the form of tablets, lozenges, or gels formulated in a conventional manner. Transdermal Formulations [00470] Transdermal formulations described herein may be administered using a variety of devices which have been described in the art. For example, such devices include, but are not limited to, U.S. Pat. Nos. 3,598,122, 3,598,123, 3,710,795, 3,731,683, 3,742,951, 3,814,097, 3,921,636, 3,972,995, 3,993,072, 3,993,073, 3,996,934, 4,031,894, 4,060,084, 4,069,307, 4,077,407, 4,201,211, 4,230,105, 4,292,299, 4,292,303, 5,336,168, 5,665,378, 5,837,280, 5,869,090, 6,923,983, 6,929,801 and 6,946,144, each of which is specifically incorporated by reference in its entirety. [00471] The transdermal dosage forms described herein may incorporate certain pharmaceutically acceptable excipients which are conventional in the art. In some embodiments, the transdermal
formulations described herein include at least three components: (1) a formulation of a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) (2) a penetration enhancer; and (3) an aqueous adjuvant. In addition, transdermal formulations can include additional components such as, but not limited to, gelling agents, creams and ointment bases, and the like. In some embodiments, the transdermal formulation can further include a woven or non-woven backing material to enhance absorption and prevent the removal of the transdermal formulation from the skin. In some embodiments, the transdermal formulations described herein can maintain a saturated or supersaturated state to promote diffusion into the skin. [00472] Formulations suitable for transdermal administration of compounds described herein may employ transdermal delivery devices and transdermal delivery patches and can be lipophilic emulsions or buffered, aqueous solutions, dissolved and/or dispersed in a polymer or an adhesive. Such patches may be constructed for continuous, pulsatile, or on demand delivery of pharmaceutical agents. Still further, transdermal delivery of the compounds described herein can be accomplished by means of iontophoretic patches and the like. Additionally, transdermal patches can provide controlled delivery of the compounds of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd). The rate of absorption can be slowed by using rate-controlling membranes or by trapping the compound within a polymer matrix or gel. Conversely, absorption enhancers can be used to increase absorption. An absorption enhancer or carrier can include absorbable pharmaceutically acceptable solvents to assist passage through the skin. For example, transdermal devices are in the form of a bandage comprising a backing member, a reservoir containing the compound optionally with carriers, optionally a rate controlling barrier to deliver the compound to the skin of the host at a controlled and predetermined rate over a prolonged period of time, and means to secure the device to the skin. Injectable Formulations [00473] Formulations that include a compound of any one of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) suitable for intramuscular, subcutaneous, or intravenous injection may include physiologically acceptable sterile aqueous or non-aqueous solutions, dispersions, suspensions or emulsions, and sterile powders for reconstitution into sterile injectable solutions or dispersions. Examples of suitable aqueous and non- aqueous carriers, diluents, solvents, or vehicles including water, ethanol, polyols (propyleneglycol, polyethylene-glycol, glycerol, cremophor and the like), suitable mixtures thereof, vegetable oils (such as olive oil) and injectable organic esters such as ethyl oleate. Proper fluidity can be maintained, for example, by the use of a coating such as lecithin, by the maintenance of the required particle size in the case of dispersions, and by the use of surfactants. Formulations suitable for subcutaneous injection may also contain additives such as preserving, wetting, emulsifying, and dispensing agents. Prevention of the growth of microorganisms can be ensured by various antibacterial and antifungal agents, such as parabens, chlorobutanol, phenol, sorbic acid, and the like. It may also be desirable to include isotonic agents, such as sugars, sodium chloride, and the like. Prolonged absorption of the injectable
pharmaceutical form can be brought about by the use of agents delaying absorption, such as aluminum monostearate and gelatin. [00474] For intravenous injections, compounds described herein may be formulated in aqueous solutions, preferably in physiologically compatible buffers such as Hank’s solution, Ringer’s solution, or physiological saline buffer. For transmucosal administration, penetrants appropriate to the barrier to be permeated are used in the formulation. Such penetrants are generally known in the art. For other parenteral injections, appropriate formulations may include aqueous or nonaqueous solutions, preferably with physiologically compatible buffers or excipients. Such excipients are generally known in the art. [00475] Parenteral injections may involve bolus injection or continuous infusion. Formulations for injection may be presented in unit dosage form, e.g., in ampoules or in multi-dose containers, with an added preservative. The pharmaceutical composition described herein may be in a form suitable for parenteral injection as a sterile suspensions, solutions, or emulsions in oily or aqueous vehicles, and may contain formulatory agents such as suspending, stabilizing and/or dispersing agents. Pharmaceutical compositions for parenteral administration include aqueous solutions of the active compounds in water-soluble form. Additionally, suspensions of the active compounds may be prepared as appropriate oily injection suspensions. Suitable lipophilic solvents or vehicles include fatty oils such as sesame oil, or synthetic fatty acid esters, such as ethyl oleate or triglycerides, or liposomes. Aqueous injection suspensions may contain substances which increase the viscosity of the suspension, such as sodium carboxymethyl cellulose, sorbitol, or dextran. Optionally, the suspension may also contain suitable stabilizers or agents which increase the solubility of the compounds to allow for the preparation of highly concentrated solutions. Alternatively, the active ingredient may be in powder form for constitution with a suitable vehicle, e.g., sterile pyrogen-free water, before use. Formulations [00476] In certain embodiments, delivery systems for pharmaceutical compounds may be employed, such as, for example, liposomes and emulsions. In certain embodiments, compositions provided herein can also include an mucoadhesive polymer, selected from among, for example, carboxymethylcellulose, carbomer (acrylic acid polymer), poly(methylmethacrylate), polyacrylamide, polycarbophil, acrylic acid/butyl acrylate copolymer, sodium alginate and dextran. [00477] In some embodiments, the compounds described herein may be administered topically and can be formulated into a variety of topically administrable compositions, such as solutions, suspensions, lotions, gels, pastes, medicated sticks, balms, creams, or ointments. Such pharmaceutical compounds can contain solubilizers, stabilizers, tonicity enhancing agents, buffers, and preservatives. [00478] The compounds described herein may also be formulated in rectal compositions such as enemas, rectal gels, rectal foams, rectal aerosols, suppositories, jelly suppositories, or retention enemas, containing conventional suppository bases such as cocoa butter or other glycerides, as well as synthetic polymers such as polyvinylpyrrolidone, PEG, and the like. In suppository forms of the compositions, a low-melting wax such as, but not limited to, a mixture of fatty acid glycerides, optionally in combination with cocoa butter is first melted.
Examples of Methods of Dosing and Treatment Regimens [00479] The compounds described herein can be used in the preparation of medicaments for the inhibition of FLT3 or a homolog thereof, or for the treatment of diseases or conditions that would benefit, at least in part, from inhibition of FLT3 or a homolog thereof. In addition, a method for treating any of the diseases or conditions described herein in a subject in need of such treatment, involves administration of pharmaceutical compositions containing at least one compound of any of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), and Formula (P5-I') – (P5-Vd) described herein, or a pharmaceutically acceptable salt, pharmaceutically acceptable N-oxide, pharmaceutically active metabolite, pharmaceutically acceptable prodrug, or pharmaceutically acceptable solvate thereof, in therapeutically effective amounts to said subject. [00480] The compositions containing the compound(s) described herein can be administered for prophylactic and/or therapeutic treatments. In therapeutic applications, the compositions are administered to a patient already suffering from a disease or condition, in an amount sufficient to cure or at least partially arrest the symptoms of the disease or condition. Amounts effective for this use will depend on the severity and course of the disease or condition, previous therapy, the patient’s health status, weight, and response to the drugs, and the judgment of the treating physician. It is considered well within the skill of the art for one to determine such therapeutically effective amounts by routine experimentation (including, but not limited to, a dose escalation clinical trial). [00481] In prophylactic applications, compositions containing the compounds described herein are administered to a patient susceptible to or otherwise at risk of a particular disease, disorder, or condition. Such an amount is defined to be a “prophylactically effective amount or dose.” In this use, the precise amounts also depend on the patient’s state of health, weight, and the like. It is considered well within the skill of the art for one to determine such prophylactically effective amounts by routine experimentation (e.g., a dose escalation clinical trial). When used in a patient, effective amounts for this use will depend on the severity and course of the disease, disorder or condition, previous therapy, the patient’s health status and response to the drugs, and the judgment of the treating physician. [00482] In the case wherein the patient’s condition does not improve, upon the doctor’s discretion the administration of the compounds may be administered chronically, that is, for an extended period of time, including throughout the duration of the patient’s life in order to ameliorate or otherwise control or limit the symptoms of the patient’s disease or condition. [00483] In the case wherein the patient’s status does improve, upon the doctor’s discretion the administration of the compounds may be given continuously; alternatively, the dose of drug being administered may be temporarily reduced or temporarily suspended for a certain length of time (i.e., a “drug holiday”). The length of the drug holiday can vary between 2 days and 1 year, including by way of example only, 2 days, 3 days, 4 days, 5 days, 6 days, 7 days, 10 days, 12 days, 15 days, 20 days, 28 days, 35 days, 50 days, 70 days, 100 days, 120 days, 150 days, 180 days, 200 days, 250 days, 280 days, 300 days, 320 days, 350 days, or 365 days. The dose reduction during a drug holiday may be from 10%-100%,
including, by way of example only, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, or 100%. [00484] Once improvement of the patient’s conditions has occurred, a maintenance dose is administered if necessary. Subsequently, the dosage or the frequency of administration, or both, can be reduced, as a function of the symptoms, to a level at which the improved disease, disorder or condition is retained. Patients can, however, require intermittent treatment on a long-term basis upon any recurrence of symptoms. [00485] The amount of a given agent that will correspond to such an amount will vary depending upon factors such as the particular compound, disease or condition and its severity, the identity (e.g., weight) of the subject or host in need of treatment, but can nevertheless be routinely determined in a manner known in the art according to the particular circumstances surrounding the case, including, e.g., the specific agent being administered, the route of administration, the condition being treated, and the subject or host being treated. In general, however, doses employed for adult human treatment will typically be in the range of 0.02-5000 mg per day, or from about 1-1500 mg per day. The desired dose may conveniently be presented in a single dose or as divided doses administered simultaneously (or over a short period of time) or at appropriate intervals, for example as two, three, four or more sub-doses per day. [00486] The pharmaceutical composition described herein may be in unit dosage forms suitable for single administration of precise dosages. In unit dosage form, the formulation is divided into unit doses containing appropriate quantities of one or more compound. The unit dosage may be in the form of a package containing discrete quantities of the formulation. Non-limiting examples are packaged tablets or capsules, and powders in vials or ampoules. Aqueous suspension compositions can be packaged in single- dose non-reclosable containers. Alternatively, multiple-dose reclosable containers can be used, in which case it is typical to include a preservative in the composition. By way of example only, formulations for parenteral injection may be presented in unit dosage form, which include, but are not limited to ampoules, or in multi-dose containers, with an added preservative. [00487] The foregoing ranges are merely suggestive, as the number of variables in regard to an individual treatment regime is large, and considerable excursions from these recommended values are not uncommon. Such dosages may be altered depending on a number of variables, not limited to the activity of the compound used, the disease or condition to be treated, the mode of administration, the requirements of the individual subject, the severity of the disease or condition being treated, and the judgment of the practitioner. [00488] Toxicity and therapeutic efficacy of such therapeutic regimens can be determined by standard pharmaceutical procedures in cell cultures or experimental animals, including, but not limited to, the determination of the LD50 (the dose lethal to 50% of the population) and the ED50 (the dose therapeutically effective in 50% of the population). The dose ratio between the toxic and therapeutic effects is the therapeutic index and it can be expressed as the ratio between LD50 and ED50. Compounds exhibiting high therapeutic indices are preferred. The data obtained from cell culture assays and animal studies can be used in formulating a range of dosage for use in human. The dosage of such compounds lies preferably
within a range of circulating concentrations that include the ED50 with minimal toxicity. The dosage may vary within this range depending upon the dosage form employed and the route of administration utilized Methods of Treatment. [00489] In particular embodiments, provided herein are methods of treating, ameliorating, or preventing a disease or condition in a patient in need thereof comprising administering an amount of a compound described herein to treat, ameliorate, or prevent the disease or condition. In particular embodiments, provided herein are methods of treating, ameliorating, or preventing a disease or condition in a patient in need thereof comprising administering an amount of a pharmaceutical composition described herein to treat, ameliorate, or prevent the disease or condition. In certain embodiments, provided herein are any of the compounds described herein for use in therapy. In certain embodiments, provided herein are any of the pharmaceutical compositions described herein for use in therapy. In certain embodiments, provided herein are any of the compounds described herein for use in treating, ameliorating, or preventing a disease or condition in a patient in need thereof. In certain embodiments, provided herein are any of the pharmaceutical compositions described herein for use in treating, ameliorating, or preventing a disease or condition in a patient in need thereof. In certain embodiments, provided herein are any of the compounds described herein for use the manufacture of a medicament for therapy. In certain embodiments, provided herein are any of the pharmaceutical compositions described herein for therapy. In certain embodiments, provided herein are any of the compounds described herein for use the manufacture of a medicament for treating, ameliorating, or preventing a disease or condition in a patient in need thereof. In certain embodiments, provided herein are any of the pharmaceutical compositions described herein for the manufacture of a medicament for treating, ameliorating, or preventing a disease or condition in a patient in need thereof. Useful conditions and disorders are described herein. [00490] In certain embodiments, the disease or condition is associated with FLT3 dysfunction. In certain embodiments, the disease or condition is associated with undesired FLT3 expression. In certain embodiments, the disease or condition is associated with excessive FLT3 expression. In certain embodiments, the disease or condition is associated with undesired FLT3 levels. In certain embodiments, the disease or condition is associated with excessive FLT3 levels. In certain embodiments, the disease or condition is associated with undesired FLT3 activity. In certain embodiments, the disease or condition is associated with excessive FLT3 activity. In certain embodiments, the disease or condition is associated with undesired FLT3-MLL interaction. In certain embodiments, the disease or condition is associated with excessive FLT3-MLL interaction. In certain embodiments, the disease or condition is amenable to treatment by inhibiting FLT3 expression. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3 expression. In certain embodiments, the disease or condition is amenable to treatment by inhibiting FLT3 levels. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3 levels. In certain embodiments, the disease or condition is amenable to treatment by inhibiting undesired FLT3 activity. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3 activity. In certain
embodiments, the disease or condition is amenable to treatment by inhibiting FLT3-MLL interaction. In certain embodiments, the disease or condition is amenable to treatment by inhibiting excessive FLT3- MLL interaction. [00491] In certain embodiments, the disease or condition is associated with a mutation in the FLT3 gene. In certain embodiments, the mutation in the FLT3 gene is an internal tandem duplicate mutation (FLT3- IND). In certain embodiments, the FLT3-IND mutation is a D835 mutation. In one embodiment, the FLT3-IND mutation is D835V. In certain embodiments, the FLT3-IND mutation is D835Y. In certain embodiments, the mutation is a point mutation in the tyrosine kinase domain (FLT3-TKD). In certain embodiments, the FLT3 mutation is selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof. In certain embodiments, the FLT3 mutation is N676K. In certain embodiments, the FLT3 mutation is F691L. In certain embodiments, the FLT3 mutation is D835H. In certain embodiments, the FLT3 mutation is D835V. In certain embodiments, the FLT3 mutation is D835Y. In certain embodiments, the FLT3 mutation is Y842C. In certain embodiments, the patient has an NPM1 mutation. [00492] In some embodiments, compounds provided herein are administered to a human. [00493] In some embodiments, compounds provided herein are orally administered. [00494] In some embodiments, the disease or condition is a hematologic malignancy, including, but not limited to, leukemia, lymphoma, or multiple myeloma. In certain embodiments, the disease or condition is a leukemia, including, but not limited to, acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), acute prolymphocytic leukemia (APL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), chronic neutrophilic leukemia (CNL), acute undifferentiated leukemia (AUL), anaplastic large cell lymphoma (ALCL), prolymphocytic leukemia (PML), juvenile myelomonocytic leukemia (JMML), adult T cell ALL, or myeloproliferative disorder (MPD), mast-cell lymphoma (MCC), or myelodysplastic syndromes (MDS). In certain embodiments, the disease or condition is acute myeloid leukemia (AML). In certain embodiments, the disease or condition is relapsed or refractory AML. [00495] In certain embodiments, the disease or condition is a lymphoma, including, but not limited to, non-Hodgkin’s lymphoma or Hodgkin’s lymphoma. In certain embodiments, the disease or condition is non-Hodgkin’s lymphoma, including, but not limited to, B-cell lymphoma, diffuse large B-cell lymphoma (DLBCL), T-cell lymphoma, Burkitt’s lymphoma, follicular lymphoma (FL), mantle cell lymphoma, primary mediastinal B cell lymphoma, small lymphocytic lymphoma, or Waldenstrom macroglobulinemia (lymphoplasmacytic lymphoma). In certain embodiments, the disease or condition is Hodgkin’s lymphoma, including but not limited to, lymphocyte-deleted Hodgkin’s disease, lymphocyte-rich Hodgkin’s disease, mixed cellularity Hodgkin’s lymphoma, nodular lymphocyte-predominant Hodgkin’s disease, or nodular sclerosis Hodgkin’s lymphoma. [00496] In certain embodiments, the disease or condition is multiple myeloma. In one embodiment, the multiple myeloma is hyperdiploid. In one embodiment, the multiple myeloma is hypodiploid. [00497] In certain embodiments, the disease or condition is relapsed or refractory. In one embodiment, the disease or condition is relapsed or refractory acute myeloid leukemia (AML). In certain embodiments,
the disease or condition is newly diagnosed. In one embodiment, the disease or condition is newly diagnosed AML. Combination Treatments [00498] The FLT3 inhibitor compositions described herein can also be used in combination with other well-known therapeutic reagents that are selected for their therapeutic value for the condition to be treated. In general, the compositions described herein and, in embodiments where combinational therapy is employed, other agents do not have to be administered in the same pharmaceutical composition, and may, because of different physical and chemical characteristics, have to be administered by different routes. The determination of the mode of administration and the advisability of administration, where possible, in the same pharmaceutical composition, is well within the knowledge of the skilled clinician. The initial administration can be made according to established protocols known in the art, and then, based upon the observed effects, the dosage, modes of administration and times of administration can be modified by the skilled clinician. [00499] In certain instances, it may be appropriate to administer at least one FLT3 inhibitor compound described herein in combination with another therapeutic agent. By way of example only, if one of the side effects experienced by a patient upon receiving one of the FLT3 inhibitor compounds described herein is nausea, then it may be appropriate to administer an anti-nausea agent in combination with the initial therapeutic agent. Or, by way of example only, the therapeutic effectiveness of one of the compounds described herein may be enhanced by administration of an adjuvant (i.e., by itself the adjuvant may have minimal therapeutic benefit, but in combination with another therapeutic agent, the overall therapeutic benefit to the patient is enhanced). Or, by way of example only, the benefit experienced by a patient may be increased by administering one of the compounds described herein with another therapeutic agent (which also includes a therapeutic regimen) that also has therapeutic benefit. In any case, regardless of the disease, disorder or condition being treated, the overall benefit experienced by the patient may simply be additive of the two therapeutic agents or the patient may experience a synergistic benefit. [00500] The particular choice of compounds used will depend upon the diagnosis of the attending physicians and their judgment of the condition of the patient and the appropriate treatment protocol. The compounds may be administered concurrently (e.g., simultaneously, essentially simultaneously or within the same treatment protocol) or sequentially, depending upon the nature of the disease, disorder, or condition, the condition of the patient, and the actual choice of compounds used. The determination of the order of administration, and the number of repetitions of administration of each therapeutic agent during a treatment protocol, is well within the knowledge of the skilled physician after evaluation of the disease being treated and the condition of the patient. [00501] It is known to those of skill in the art that therapeutically-effective dosages can vary when the drugs are used in treatment combinations. Methods for experimentally determining therapeutically- effective dosages of drugs and other agents for use in combination treatment regimens are described in the
literature. For example, the use of metronomic dosing, i.e., providing more frequent, lower doses in order to minimize toxic side effects, has been described extensively in the literature Combination treatment further includes periodic treatments that start and stop at various times to assist with the clinical management of the patient. [00502] For combination therapies described herein, dosages of the co-administered compounds will of course vary depending on the type of co-drug employed, on the specific drug employed, on the disease or condition being treated and so forth. In addition, when co-administered with one or more biologically active agents, the compound provided herein may be administered either simultaneously with the biologically active agent(s), or sequentially. If administered sequentially, the attending physician will decide on the appropriate sequence of administering protein in combination with the biologically active agent(s). [00503] In any case, the multiple therapeutic agents (one of which is a compound of Formula (P-I), Formula (I) – Formula (LXIIIb), Formula (P2-I), Formula (P4-I) – (P4-Vb), or Formula (P5-I') – (P5-Vd) described herein) may be administered in any order or even simultaneously. If simultaneously, the multiple therapeutic agents may be provided in a single, unified form, or in multiple forms (by way of example only, either as a single pill or as two separate pills). One of the therapeutic agents may be given in multiple doses, or both may be given as multiple doses. If not simultaneous, the timing between the multiple doses may vary from more than zero weeks to less than four weeks. In addition, the combination methods, compositions and formulations are not to be limited to the use of only two agents; the use of multiple therapeutic combinations are also envisioned. [00504] It is understood that the dosage regimen to treat, prevent, or ameliorate the condition(s) for which relief is sought, can be modified in accordance with a variety of factors. These factors include the disorder from which the subject suffers, as well as the age, weight, sex, diet, and medical condition of the subject. Thus, the dosage regimen actually employed can vary widely and therefore can deviate from the dosage regimens set forth herein. [00505] The pharmaceutical agents which make up the combination therapy disclosed herein may be a combined dosage form or in separate dosage forms intended for substantially simultaneous administration. The pharmaceutical agents that make up the combination therapy may also be administered sequentially, with either therapeutic compound being administered by a regimen calling for two-step administration. The two-step administration regimen may call for sequential administration of the active agents or spaced- apart administration of the separate active agents. The time period between the multiple administration steps may range from, a few minutes to several hours, depending upon the properties of each pharmaceutical agent, such as potency, solubility, bioavailability, plasma half-life, and kinetic profile of the pharmaceutical agent. Circadian variation of the target molecule concentration may also determine the optimal dose interval. [00506] In addition, the compounds described herein also may be used in combination with procedures that may provide additional or synergistic benefit to the patient. By way of example only, patients are expected to find therapeutic and/or prophylactic benefit in the methods described herein, wherein
pharmaceutical composition of a compound disclosed herein and /or combinations with other therapeutics are combined with genetic testing to determine whether that individual is a carrier of a mutant gene that is known to be correlated with certain diseases or conditions. [00507] The compounds described herein and combination therapies can be administered before, during or after the occurrence of a disease or condition, and the timing of administering the composition containing a compound can vary. Thus, for example, the compounds can be used as a prophylactic and can be administered continuously to subjects with a propensity to develop conditions or diseases in order to prevent the occurrence of the disease or condition. The compounds and compositions can be administered to a subject during or as soon as possible after the onset of the symptoms. The administration of the compounds can be initiated within the first 48 hours of the onset of the symptoms, within the first 6 hours of the onset of the symptoms, or within 3 hours of the onset of the symptoms. The initial administration can be via any route practical, such as, for example, an intravenous injection, a bolus injection, infusion over 5 minutes to about 5 hours, a pill, a capsule, transdermal patch, buccal delivery, and the like, or combination thereof. A compound should be administered as soon as is practicable after the onset of a disease or condition is detected or suspected, and for a length of time necessary for the treatment of the disease, such as, for example, from about 1 month to about 3 months. The length of treatment can vary for each subject, and the length can be determined using the known criteria. For example, the compound or a formulation containing the compound can be administered for at least 2 weeks, between about 1 month to about 5 years, or from about 1 month to about 3 years. Exemplary Therapeutic Agents for Use in Combination with a FLT3 inhibitor Compound [00508] Other anti-cancer agents that can be employed in combination with an FLT3 inhibitor compound include Adriamycin, Dactinomycin, Bleomycin, Vinblastine, Cisplatin, acivicin; aclarubicin; acodazole hydrochloride; acronine; adozelesin; aldesleukin; altretamine; ambomycin; ametantrone acetate; aminoglutethimide; amsacrine; anastrozole; anthramycin; asparaginase; asperlin; azacitidine; azetepa; azotomycin; batimastat; benzodepa; bicalutamide; bisantrene hydrochloride; bisnafide dimesylate; bizelesin; bleomycin sulfate; brequinar sodium; bropirimine; busulfan; cactinomycin; calusterone; caracemide; carbetimer; carboplatin; carmustine; carubicin hydrochloride; carzelesin; cedefingol; chlorambucil; cirolemycin; cladribine; crisnatol mesylate; cyclophosphamide; cytarabine; dacarbazine; daunorubicin hydrochloride; decitabine; dexormaplatin; dezaguanine; dezaguanine mesylate; diaziquone; doxorubicin; doxorubicin hydrochloride; droloxifene; droloxifene citrate; dromostanolone propionate; duazomycin; edatrexate; eflornithine hydrochloride; elsamitrucin; enloplatin; enpromate; epipropidine; epirubicin hydrochloride; erbulozole; esorubicin hydrochloride; estramustine; estramustine phosphate sodium; etanidazole; etoposide; etoposide phosphate; etoprine; fadrozole hydrochloride; fazarabine; fenretinide; floxuridine; fludarabine phosphate; fluorouracil; flurocitabine; fosquidone; fostriecin sodium; gemcitabine; gemcitabine hydrochloride; hydroxyurea; idarubicin hydrochloride; ifosfamide; iimofosine; interleukin Il (including recombinant interleukin II, or rlL2), interferon α-2a; interferon α-2b; interferon α- n1; interferon α-n3; interferon β-la; interferon γ-lb; iproplatin; irinotecan hydrochloride; lanreotide
acetate; letrozole; leuprolide acetate; liarozole hydrochloride; lometrexol sodium; lomustine; losoxantrone hydrochloride; masoprocol; maytansine; mechlorethamine hydrochloride; megestrol acetate; melengestrol acetate; melphalan; menogaril; mercaptopurine; methotrexate; methotrexate sodium; metoprine; meturedepa; mitindomide; mitocarcin; mitocromin; mitogillin; mitomalcin; mitomycin; mitosper; mitotane; mitoxantrone hydrochloride; mycophenolic acid; nocodazoie; nogalamycin; ormaplatin; oxisuran; pegaspargase; peliomycin; pentamustine; peplomycin sulfate; perfosfamide; pipobroman; piposulfan; piroxantrone hydrochloride; plicamycin; plomestane; porfimer sodium; porfiromycin; prednimustine; procarbazine hydrochloride; puromycin; puromycin hydrochloride; pyrazofurin; riboprine; rogletimide; safingol; safingol hydrochloride; semustine; simtrazene; sparfosate sodium; sparsomycin; spirogermanium hydrochloride; spiromustine; spiroplatin; streptonigrin; streptozocin; sulofenur; talisomycin; tecogalan sodium; tegafur; teloxantrone hydrochloride; temoporfin; teniposide; teroxirone; testolactone; thiamiprine; thioguanine; thiotepa; tiazofurin; tirapazamine; toremifene citrate; trestolone acetate; triciribine phosphate; trimetrexate; trimetrexate glucuronate; triptorelin; tubulozole hydrochloride; uracil mustard; uredepa; vapreotide; verteporfin; vinblastine sulfate; vincristine sulfate; vindesine; vindesine sulfate; vinepidine sulfate; vinglycinate sulfate; vinleurosine sulfate; vinorelbine tartrate; vinrosidine sulfate; vinzolidine sulfate; vorozole; zeniplatin; zinostatin; zorubicin hydrochloride. [00509] Other anti-cancer agents that can be employed in combination with an FLT3 inhibitor compound include: 20-epi-1, 25 dihydroxyvitamin D3; 5-ethynyluracil; abiraterone; aclarubicin; acylfulvene; adecypenol; adozelesin; aldesleukin; ALL-TK antagonists; altretamine; ambamustine; amidox; amifostine; aminolevulinic acid; amrubicin; amsacrine; anagrelide; anastrozole; andrographolide; angiogenesis irreversible inhibitors; antagonist D; antagonist G; antarelix; anti-dorsalizing morphogenetic protein-1; antiandrogen, prostatic carcinoma; antiestrogen; antineoplaston; antisense oligonucleotides; aphidicolin glycinate; apoptosis gene modulators; apoptosis regulators; apurinic acid; ara-CDP-DL- PTBA; arginine deaminase; asulacrine; atamestane; atrimustine; axinastatin 1; axinastatin 2; axinastatin 3; azasetron; azatoxin; azatyrosine; baccatin III derivatives; balanol; batimastat; BCR/ABL antagonists; benzochlorins; benzoylstaurosporine; beta lactam derivatives; beta-alethine; betaclamycin B; betulinic acid; bFGF inhibitor; bicalutamide; bisantrene; bisaziridinylspermine; bisnafide; bistratene A; bizelesin; breflate; bropirimine; budotitane; buthionine sulfoximine; calcipotriol; calphostin C; camptothecin derivatives; canarypox IL-2; capecitabine; carboxamide-amino-triazole; carboxyamidotriazole; CaRest M3; CARN 700; cartilage derived inhibitor; carzelesin; casein kinase irreversible inhibitors (ICOS); castanospermine; cecropin B; cetrorelix; chlorlns; chloroquinoxaline sulfonamide; cicaprost; cis- porphyrin; cladribine; clomifene analogues; clotrimazole; collismycin A; collismycin B; combretastatin A4; combretastatin analogue; conagenin; crambescidin 816; crisnatol; cryptophycin 8; cryptophycin A derivatives; curacin A; cyclopentanthraquinones; cycloplatam; cypemycin; cytarabine ocfosfate; cytolytic factor; cytostatin; dacliximab; decitabine; dehydrodidemnin B; deslorelin; dexamethasone; dexifosfamide; dexrazoxane; dexverapamil; diaziquone; didemnin B; didox; diethylnorspermine; dihydro-5-azacytidine; 9- dioxamycin; diphenyl spiromustine; docosanol; dolasetron; doxifluridine; droloxifene; dronabinol; duocarmycin SA; ebselen; ecomustine; edelfosine; edrecolomab; eflornithine; elemene; emitefur;
epirubicin; epristeride; estramustine analogue; estrogen agonists; estrogen antagonists; etanidazole; etoposide phosphate; exemestane; fadrozole; fazarabine; fenretinide; filgrastim; finasteride; flavopiridol; flezelastine; fluasterone; fludarabine; fluorodaunorunicin hydrochloride; forfenimex; formestane; fostriecin; fotemustine; gadolinium texaphyrin; gallium nitrate; galocitabine; ganirelix; gelatinase irreversible inhibitors; gemcitabine; glutathione irreversible inhibitors; hepsulfam; heregulin; hexamethylene bisacetamide; hypericin; ibandronic acid; idarubicin; idoxifene; idramantone; ilmofosine; ilomastat; imidazoacridones; imiquimod; immunostimulant peptides; insulin-like growth factor-1 receptor inhibitor; interferon agonists; interferons; interleukins; iobenguane; iododoxorubicin; ipomeanol, 4-; iroplact; irsogladine; isobengazole; isohomohalicondrin B; itasetron; jasplakinolide; kahalalide F; lamellarin-N triacetate; lanreotide; leinamycin; lenograstim; lentinan sulfate; leptolstatin; letrozole; leukemia inhibiting factor; leukocyte alpha interferon; leuprolide+estrogen+progesterone; leuprorelin; levamisole; liarozole; linear polyamine analogue; lipophilic disaccharide peptide; lipophilic platinum compounds; lissoclinamide 7; lobaplatin; lombricine; lometrexol; lonidamine; losoxantrone; lovastatin; loxoribine; lurtotecan; lutetium texaphyrin; lysofylline; lytic peptides; maitansine; mannostatin A; marimastat; masoprocol; maspin; matrilysin irreversible inhibitors; matrix metalloproteinase irreversible inhibitors; menogaril; merbarone; meterelin; methioninase; metoclopramide; MIF inhibitor; mifepristone; miltefosine; mirimostim; mismatched double stranded RNA; mitoguazone; mitolactol; mitomycin analogues; mitonafide; mitotoxin fibroblast growth factor-saporin; mitoxantrone; mofarotene; molgramostim; monoclonal antibody, human chorionic gonadotrophin; monophosphoryl lipid A+myobacterium cell wall sk; mopidamol; multiple drug resistance gene inhibitor; multiple tumor suppressor 1 -based therapy; mustard anticancer agent; mycaperoxide B; mycobacterial cell wall extract; myriaporone; N-acetyldinaline; N-substituted benzamides; nafarelin; nagrestip; naloxone+pentazocine; napavin; naphterpin; nartograstim; nedaplatin; nemorubicin; neridronic acid; neutral endopeptidase; nilutamide; nisamycin; nitric oxide modulators; nitroxide antioxidant; nitrullyn; O6-benzylguanine; octreotide; okicenone; oligonucleotides; onapristone; ondansetron; ondansetron; oracin; oral cytokine inducer; ormaplatin; osaterone; oxaliplatin; oxaunomycin; palauamine; palmitoylrhizoxin; pamidronic acid; panaxytriol; panomifene; parabactin; pazelliptine; pegaspargase; peldesine; pentosan polysulfate sodium; pentostatin; pentrozole; perflubron; perfosfamide; perillyl alcohol; phenazinomycin; phenylacetate; phosphatase irreversible inhibitors; picibanil; pilocarpine hydrochloride; pirarubicin; piritrexim; placetin A; placetin B; plasminogen activator inhibitor; platinum complex; platinum compounds; platinum-triamine complex; porfimer sodium; porfiromycin; prednisone; propyl bis-acridone; prostaglandin J2; proteasome irreversible inhibitors; protein A-based immune modulator; protein kinase C inhibitor; protein kinase C irreversible inhibitors, microalgal; protein tyrosine phosphatase irreversible inhibitors; purine nucleoside phosphorylase irreversible inhibitors; purpurins; pyrazoloacridine; pyridoxylated hemoglobin polyoxyethylerie conjugate; raf antagonists; raltitrexed; ramosetron; ras farnesyl protein transferase irreversible inhibitors; ras irreversible inhibitors; ras-GAP inhibitor; retelliptine demethylated; rhenium Re 186 etidronate; rhizoxin; ribozymes; RII retinamide; rogletimide; rohitukine; romurtide; roquinimex; rubiginone B1; ruboxyl; safingol; saintopin; SarCNU; sarcophytol A;
sargramostim; Sdi 1 mimetics; semustine; senescence derived inhibitor 1; sense oligonucleotides; signal transduction irreversible inhibitors; signal transduction modulators; single chain antigen-binding protein; sizofiran; sobuzoxane; sodium borocaptate; sodium phenylacetate; solverol; somatomedin binding protein; sonermin; sparfosic acid; spicamycin D; spiromustine; splenopentin; spongistatin 1; squalamine; stem cell inhibitor; stem-cell division irreversible inhibitors; stipiamide; stromelysin irreversible inhibitors; sulfinosine; superactive vasoactive intestinal peptide antagonist; suradista; suramin; swainsonine; synthetic glycosaminoglycans; tallimustine; tamoxifen methiodide; tauromustine; tazarotene; tecogalan sodium; tegafur; tellurapyrylium; telomerase irreversible inhibitors; temoporfin; temozolomide; teniposide; tetrachlorodecaoxide; tetrazomine; thaliblastine; thiocoraline; thrombopoietin; thrombopoietin mimetic; thymalfasin; thymopoietin receptor agonist; thymotrinan; thyroid stimulating hormone; tin ethyl etiopurpurin; tirapazamine; titanocene bichloride; topsentin; toremifene; totipotent stem cell factor; translation irreversible inhibitors; tretinoin; triacetyluridine; triciribine; trimetrexate; triptorelin; tropisetron; turosteride; tyrosine kinase irreversible inhibitors; tyrphostins; UBC irreversible inhibitors; ubenimex; urogenital sinus-derived growth inhibitory factor; urokinase receptor antagonists; vapreotide; variolin B; vector system, erythrocyte gene therapy; velaresol; veramine; verdins; verteporfin; vinorelbine; vinxaltine; vitaxin; vorozole; zanoterone; zeniplatin; zilascorb; and zinostatin stimalamer. [00510] Yet other anticancer agents that can be employed in combination with an FLT3 inhibitor compound include alkylating agents, antimetabolites, natural products, or hormones, e.g., nitrogen mustards (e.g., mechloroethamine, cyclophosphamide, chlorambucil, etc.), alkyl sulfonates (e.g., busulfan), nitrosoureas (e.g., carmustine, lomusitne, etc.), or triazenes (decarbazine, etc.). Examples of antimetabolites include but are not limited to folic acid analog (e.g., methotrexate), or pyrimidine analogs (e.g., Cytarabine), purine analogs (e.g., mercaptopurine, thioguanine, pentostatin). [00511] Yet other anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include Menin inhibitors. [00512] Anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include WDR5 inhibitors. [00513] Anticancer agents that can be employed in combination with an FLT3 inhibitor compound described herein include KRAS inhibitors. [00514] Examples of natural products useful in combination with an FLT3 inhibitor compound described herein include, but are not limited to, vinca alkaloids (e.g., vinblastin, vincristine), epipodophyllotoxins (e.g., etoposide), antibiotics (e.g., daunorubicin, doxorubicin, bleomycin), enzymes (e.g., L-asparaginase), or biological response modifiers (e.g., interferon alpha). [00515] Examples of alkylating agents that can be employed in combination an FLT3 inhibitor compound described herein include, but are not limited to, nitrogen mustards (e.g., mechloroethamine, cyclophosphamide, chlorambucil, meiphalan, etc.), ethylenimine and methylmelamines (e.g., hexamethlymelamine, thiotepa), alkyl sulfonates (e.g., busulfan), nitrosoureas (e.g., carmustine, lomusitne, semustine, streptozocin, etc.), or triazenes (decarbazine, etc.). Examples of antimetabolites
include, but are not limited to folic acid analog (e.g., methotrexate), or pyrimidine analogs (e.g., fluorouracil, floxouridine, Cytarabine), purine analogs (e.g., mercaptopurine, thioguanine, pentostatin. [00516] Examples of hormones and antagonists useful in combination with an FLT3 inhibitor compound described herein include, but are not limited to, adrenocorticosteroids (e.g., prednisone), progestins (e.g., hydroxyprogesterone caproate, megestrol acetate, medroxyprogesterone acetate), estrogens (e.g., diethlystilbestrol, ethinyl estradiol), antiestrogen (e.g., tamoxifen), androgens (e.g., testosterone propionate, fluoxymesterone), antiandrogen (e.g., flutamide), gonadotropin releasing hormone analog (e.g., leuprolide). Other agents that can be used in the methods and compositions described herein for the treatment or prevention of cancer include platinum coordination complexes (e.g., cisplatin, carboblatin), anthracenedione (e.g., mitoxantrone), substituted urea (e.g., hydroxyurea), methyl hydrazine derivative (e.g., procarbazine), adrenocortical suppressant (e.g., mitotane, aminoglutethimide). [00517] Examples of anti-cancer agents which act by arresting cells in the G2-M phases due to stabilized microtubules and which can be used in combination with an FLT3 inhibitor compound described herein include without limitation the following marketed drugs and drugs in development: Erbulozole (also known as R-55104), Dolastatin 10 (also known as DLS-10 and NSC-376128), Mivobulin isethionate (also known as CI-980), Vincristine, NSC-639829, Discodermolide (also known as NVP-XX-A-296), ABT-751 (Abbott, also known as E-7010), Altorhyrtins (such as Altorhyrtin A and Altorhyrtin C), Spongistatins (such as Spongistatin 1, Spongistatin 2, Spongistatin 3, Spongistatin 4, Spongistatin 5, Spongistatin 6, Spongistatin 7, Spongistatin 8, and Spongistatin 9), Cemadotin hydrochloride (also known as LU-103793 and NSC-D-669356), Epothilones (such as Epothilone A, Epothilone B, Epothilone C (also known as desoxyepothilone A or dEpoA), Epothilone D (also referred to as KOS-862, dEpoB, and desoxyepothilone B ), Epothilone E, Epothilone F, Epothilone B N-oxide, Epothilone A N-oxide, 16-aza- epothilone B, 21-aminoepothilone B (also known as BMS-310705), 21-hydroxyepothilone D (also known as Desoxyepothilone F and dEpoF), 26-fluoroepothilone), Auristatin PE (also known as NSC-654663), Soblidotin (also known as TZT-1027), LS-4559-P (Pharmacia, also known as LS-4577), LS-4578 (Pharmacia, also known as LS-477-P), LS-4477 (Pharmacia), LS-4559 (Pharmacia), RPR-112378 (Aventis), Vincristine sulfate, DZ-3358 (Daiichi), FR-182877 (Fujisawa, also known as WS-9885B), GS- 164 (Takeda), GS-198 (Takeda), KAR-2 (Hungarian Academy of Sciences), BSF-223651 (BASF, also known as ILX-651 and LU-223651), SAH-49960 (Lilly/Novartis), SDZ-268970 (Lilly/Novartis), AM-97 (Armad/Kyowa Hakko), AM-132 (Armad), AM-138 (Armad/Kyowa Hakko), IDN-5005 (Indena), Cryptophycin 52 (also known as LY-355703), AC-7739 (Ajinomoto, also known as AVE-8063A and CS- 39.HCI), AC-7700 (Ajinomoto, also known as AVE-8062, AVE-8062A, CS-39-L-Ser.HCI, and RPR- 258062A), Vitilevuamide, Tubulysin A, Canadensol, Centaureidin (also known as NSC-106969), T- 138067 (Tularik, also known as T-67, TL-138067 and TI-138067), COBRA-1 (Parker Hughes Institute, also known as DDE-261 and WHI-261), H10 (Kansas State University), H16 (Kansas State University), Oncocidin A1 (also known as BTO-956 and DIME), DDE-313 (Parker Hughes Institute), Fijianolide B, Laulimalide, SPA-2 (Parker Hughes Institute), SPA-1 (Parker Hughes Institute, also known as SPIKET- P), 3-IAABU (Cytoskeleton/Mt. Sinai School of Medicine, also known as MF-569), Narcosine (also
known as NSC-5366), Nascapine, D-24851 (Asta Medica), A-105972 (Abbott), Hemiasterlin, 3-BAABU (Cytoskeleton/Mt. Sinai School of Medicine, also known as MF-191), TMPN (Arizona State University), Vanadocene acetylacetonate, T-138026 (Tularik), Monsatrol, lnanocine (also known as NSC-698666), 3- lAABE (Cytoskeleton/Mt. Sinai School of Medicine), A-204197 (Abbott), T-607 (Tuiarik, also known as T-900607), RPR- 115781 (Aventis), Eleutherobins (such as Desmethyleleutherobin, Desaetyleleutherobin, lsoeleutherobin A, and Z-Eleutherobin), Caribaeoside, Caribaeolin, Halichondrin B, D-64131 (Asta Medica), D-68144 (Asta Medica), Diazonamide A, A-293620 (Abbott), NPI-2350 (Nereus), Taccalonolide A, TUB-245 (Aventis), A-259754 (Abbott), Diozostatin, (-)-Phenylahistin (also known as NSCL-96F037), D-68838 (Asta Medica), D-68836 (Asta Medica), Myoseverin B, D-43411 (Zentaris, also known as D-81862), A-289099 (Abbott), A-318315 (Abbott), HTI-286 (also known as SPA-110, trifluoroacetate salt) (Wyeth), D-82317 (Zentaris), D-82318 (Zentaris), SC-12983 (NCI), Resverastatin phosphate sodium, BPR-OY-007 (National Health Research Institutes), and SSR-250411 (Sanofi). [00518] The FLT3 inhibitors described herein can also be administered in combination with other FLT3 inhibitors, including, but not limited to sorafenib, midostaurin, lestaurtinib, sunitinib, tandutinib, gilteritinib, crenolanib, quizartinib, FF-10101, and HM43239. Kits/Articles of Manufacture [00519] For use in the therapeutic applications described herein, kits and articles of manufacture are also described herein. Such kits can include a carrier, package, or container that is compartmentalized to receive one or more containers such as vials, tubes, and the like, each of the container(s) including one of the separate elements to be used in a method described herein. Suitable containers include, for example, bottles, vials, syringes, and test tubes. The containers can be formed from a variety of materials such as glass or plastic. [00520] The articles of manufacture provided herein contain packaging materials. Packaging materials for use in packaging pharmaceutical products are well known to those of skill in the art. See, e.g., U.S. Patent Nos. 5,323,907, 5,052,558 and 5,033,252. Examples of pharmaceutical packaging materials include, but are not limited to, blister packs, bottles, tubes, inhalers, pumps, bags, vials, containers, syringes, bottles, and any packaging material suitable for a selected formulation and intended mode of administration and treatment. A wide array of formulations of the compounds and compositions provided herein are contemplated as are a variety of treatments for any disease, disorder, or condition that would benefit by inhibition of FLT3, or in which FLT3 is a mediator or contributor to the symptoms or cause. [00521] For example, the container(s) can include one or more compounds described herein, optionally in a composition or in combination with another agent as disclosed herein. The container(s) optionally have a sterile access port (for example the container can be an intravenous solution bag or a vial having a stopper pierceable by a hypodermic injection needle). Such kits optionally comprising a compound with an identifying description or label or instructions relating to its use in the methods described herein. [00522] A kit will typically may include one or more additional containers, each with one or more of various materials (such as reagents, optionally in concentrated form, and/or devices) desirable from a
commercial and user standpoint for use of a compound described herein. Non-limiting examples of such materials include, but not limited to, buffers, diluents, filters, needles, syringes; carrier, package, container, vial and/or tube labels listing contents and/or instructions for use, and package inserts with instructions for use. A set of instructions will also typically be included. [00523] A label can be on or associated with the container. A label can be on a container when letters, numbers or other characters forming the label are attached, molded or etched into the container itself; a label can be associated with a container when it is present within a receptacle or carrier that also holds the container, e.g., as a package insert. A label can be used to indicate that the contents are to be used for a specific therapeutic application. The label can also indicate directions for use of the contents, such as in the methods described herein. [00524] In certain embodiments, the pharmaceutical compositions can be presented in a pack or dispenser device which can contain one or more unit dosage forms containing a compound provided herein. The pack can for example contain metal or plastic foil, such as a blister pack. The pack or dispenser device can be accompanied by instructions for administration. The pack or dispenser can also be accompanied with a notice associated with the container in form prescribed by a governmental agency regulating the manufacture, use, or sale of pharmaceuticals, which notice is reflective of approval by the agency of the form of the drug for human or veterinary administration. Such notice, for example, can be the labeling approved by the U.S. Food and Drug Administration for prescription drugs, or the approved product insert. Compositions containing a compound provided herein formulated in a compatible pharmaceutical carrier can also be prepared, placed in an appropriate container, and labeled for treatment of an indicated condition. EXAMPLES [00525] The following specific and non-limiting examples are to be construed as merely illustrative, and do not limit the present disclosure in any way whatsoever. Without further elaboration, it is believed that one skilled in the art can, based on the description herein, utilize the present disclosure to its fullest extent. All publications cited herein are hereby incorporated by reference in their entirety. Where reference is made to a URL or other such identifier or address, it is understood that such identifiers can change and particular information on the internet can come and go, but equivalent information can be found by searching the internet. Reference thereto evidences the availability and public dissemination of such information. [00526] The examples below as well as throughout the application, the following abbreviations have the following meanings. If not defined, the terms have their generally accepted meanings. aq = aqueous Boc = tert-butyloxycarbonyl t-BuOH = tertiary butanol DCE = 1,2-dichloroethane
DCM = dichloromethane DIAD = diisopropyl azodicarboxylate DIEA or DIPEA = N,N-diisopropylethylamine DMAP = dimethylaminopyridine DMF = dimethylformamide DMSO = dimethylsulfoxide ESI = electron spray ionization EA = ethyl acetate g = gram HCl = hydrogen chloride HPLC = high performance liquid chromatography hr = hour NMR = proton nuclear magnetic resonance IPA = isopropyl alcohol KOAc = potassium acetate LC-MS = liquid chromatography mass spectroscopy M = molar MeCN = acetonitrile MeOH = methanol mg = milligram min = minute ml = milliliter mM = millimolar mmol = millimole m.p. = melting point MS = mass spectrometry m/z = mass-to-charge ratio N = normal NIS = N-iodosuccinimide nM = nanomolar nm = nanometer Pd(dppf)Cl2 = [1,1′-Bis(diphenylphosphino)ferrocene]dichloropalladium(II) PE = petroleum ether PyBOP = benzotriazol-1-yl-oxytripyrrolidinophosphonium hexafluorophosphate quant. = quantitative RP = reverse phase rt or r.t. = room temperature Sat. = saturated
TEA = triethylamine TFA = trifluoroacetic acid μL = microliter μM = Micromolar General Synthetic Scheme I
wherein R4 is as described herein and n is 1 or 2.
General Synthetic Scheme II
Synthesis of Intermediate 1 6-Ethyl-3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: Methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate
[00527] A mixture of 3,5-dichloro-6-ethylpyrazine-2-carboxamide (45 g, 204.49 mmol, 1 eq) and HCl/MeOH (4 M, 1000 mL, 19.56 eq) was stirred at 70 °C for 10 h. LCMS indicated the reaction was complete. The mixture was concentrated. The residue was diluted with saturated NaHCO3 (200 mL) and extracted with EtOAc (200 mL* 2). The organic layers were combined, washed with water (100 mL * 2),
saturated brine (100 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc = 100/1) to give methyl 3,5-dichloro-6-ethyl-pyrazine-2-carboxylate (36 g, 153.15 mmol, 74.89% yield) as yellow oil.1H NMR (400 MHz, CDCl3) δ = 3.95 (s, 3H), 2.94 (q, J = 7.5 Hz, 2H), 1.27 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 235.1 [(M+H)+]. Rt=0.759 min. HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 2: Methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylate
[00528] A mixture of methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate (36 g, 153.15 mmol, 1 eq), tetrahydro-2H-pyran-4-amine (30.98 g, 306.30 mmol, 2 eq), Et3N (77.48 g, 765.74 mmol, 106.58 mL, 5 eq) and DMF (450 mL) was stirred at 25 °C for 10 h. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (300 mL) and extracted with EtOAc (300 mL*2). The combined organic layers was washed with H2O (100 mL*2), saturated brine (100 mL*2), filtered, dried over Na2SO4, concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1to 1/1) to give methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxylate (39 g, 130.11 mmol, 84.96% yield) as white solid. 1H NMR (400 MHz, DMSO- d6) δ = 4.75 (br d, J = 6.7 Hz, 1H), 4.24 - 4.11 (m, 1H), 4.01 - 3.91 (m, 2H), 3.87 (s, 3H), 3.50 (dt, J = 2.0, 11.7 Hz, 2H), 2.60 (q, J = 7.5 Hz, 2H), 1.99 (br dd, J = 2.2, 12.5 Hz, 2H), 1.62 - 1.43 (m, 2H), 1.24 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 300.2 [(M+H)+]. Rt=0.734 min. Step 3: 3-Chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00529] A mixture of methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxylate (10 g, 33.36 mmol, 1 eq) and NH3 (7 M, 314 mL, 65.95 eq) was stirred at 100 °C for 10 h in autoclave. LCMS indicated the reaction was complete. The mixture was concentrated to give crude product 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (5.5 g, crude) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 7.57 (s, 1H), 7.28 (s, 1H), 7.03 (d, J=7.6 MHz, 1H), 4.08-
3.96 (m, 1H), 3.85-3.80 (m, 2H), 3.46-3.32 (t, J=10 MHz, 2H), 2.59-2.57 (q, 2H), 1.84-1.83 (m, 2H), 1.67-1.58 (m, 2H), 1.19-1.96 (t, J=7.2 MHz, 3H). LC-MS (ES+, m/z): 285.2 [(M+H)+]. Rt=0.625 min. Step 4: 6-Ethyl-3-((3-methoxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00530] To a mixture of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (3 g, 10.54 mmol, 1 eq), 3-methoxyaniline (2.60 g, 21.07 mmol, 2.36 mL, 2 eq), Cs2CO3 (15.45 g, 47.41 mmol, 4.5 eq) in t-AmylOH (20 mL) , BrettPhos Pd G3 (1.91 g, 2.11 mmol, 0.2 eq) and BrettPhos (1.13 g, 2.11 mmol, 0.2 eq) were added. The mixture was stirred at 100 °C for 10 h under N2. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (300 mL) and extracted with EtOAc (300 mL*2). The combined organic layers was washed with H2O (100 mL*2), saturated brine (100 mL*2), filtered, dried over Na2SO4, and concentrated. The residue was dissolved in DCM (20 mL). scavenger(Pd) was added and then stirred at 25 °C for 1 h, filtered, concentrated, and then purified by column chromatography (SiO2, petroleum ether/Ethyl acetate=100/1to 1/1) to give 6-ethyl-3- ((3-methoxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (1.9 g, 5.12 mmol, 48.56% yield) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.22 (s, 1H), 7.57 (br d, J = 2.0 Hz, 1H), 7.41 (t, J = 2.1 Hz, 1H), 7.28 (br d, J = 2.6 Hz, 1H), 7.23 - 7.15 (m, 1H), 7.06 (dd, J = 1.2, 8.1 Hz, 1H), 6.87 (d, J = 7.4 Hz, 1H), 6.55 (dd, J = 1.9, 8.2 Hz, 1H), 4.18 - 4.06 (m, 1H), 3.94 (br dd, J = 3.2, 10.9 Hz, 2H), 3.76 (s, 3H), 3.46 - 3.38 (m, 2H), 2.59 (q, J = 7.3 Hz, 2H), 1.89 (br dd, J = 2.1, 12.5 Hz, 2H), 1.64 (dq, J = 4.4, 12.1 Hz, 2H), 1.20 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 372.1[(M+H)+]. Rt=2.622 min, 100% purity. HRMS (EI): m/z [M]+ found: 372.2015. Scavenger (Pd): SiliaMetS® Thiol, 40-63 µm, 60 Å, SIL-R51030B, Meryer. Step 5: 6-Ethyl-3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00531] To a solution of 6-ethyl-3-((3-methoxyphenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (1.9 g, 5.12 mmol, 1 eq) in DCM (8 mL) at 0 °C, BBr3 (3.97 g, 15.86
mmol, 1.53 mL, 3.1 eq) was added. The mixture was allowed to warm to 10 °C for 2 h. LCMS indicated the reaction was complete. The mixture was poured into MeOH (30 mL) and concentrated to give 6-ethyl- 3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (1.4 g, crude) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.10 (s, 1H), 9.23 (s, 1H), 7.54 (br d, J = 3.1 Hz, 1H), 7.25 (br d, J = 2.2 Hz, 1H), 7.17 (d, J = 1.8 Hz, 1H), 7.06 - 7.00 (m, 1H), 6.99 - 6.94 (m, 1H), 6.85 (d, J = 7.5 Hz, 1H), 6.36 (br d, J = 7.9 Hz, 1H), 4.14 - 4.05 (m, 1H), 3.91 (br dd, J = 3.2, 11.3 Hz, 2H), 3.49 - 3.38 (m, 2H), 2.57 (q, J = 7.3 Hz, 2H), 1.87 (br dd, J = 2.2, 12.5 Hz, 2H), 1.61 (dq, J = 4.3, 12.0 Hz, 2H), 1.17 (t, J = 7.3 Hz, 3H). LC-MS (ES+, m/z): 358.2 [(M+H)+]. Rt=2.557 min, 97.36% purity. HRMS (EI): m/z [M]+ found: 358.1872. Synthesis of Intermediate VI tert-Butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino) phenoxy)propyl)amino)- 1-oxopropan-2-yl)(methyl)carbamate
Step 1: tert-Butyl (3-(3-nitrophenoxy)propyl)carbamate
[00532] To a solution of 3-nitrophenol (20 g, 143.77 mmol, 28.57 mL, 1 eq), tert-butyl (3- bromopropyl)carbamate (37.66 g, 158.15 mmol, 1.1 eq) in DMF (200 mL) at 25 °C, then K2CO3 (99.35 g, 718.86 mmol, 5 eq) was added. The mixture was warmed to 50 °C for 12 hrs. TLC showed the reaction was completed. The reaction was poured into H2O (300 mL). The aqueous phase was extracted with ethyl acetate (200 mL*3). The combined organic phase was washed with saturated brine (300 mL*1), dried over Na2SO4, filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to give tert-butyl (3-(3-nitrophenoxy)propyl)carbamate (41 g, 134.35 mmol, 93.45% yield) as a yellow solid. 1H NMR (400 MHz, CHLOROFORM-d) δ = 7.77 - 7.70 (m, 1H), 7.64 (t, J = 2.3 Hz, 1H), 7.35 (t, J = 8.2 Hz, 1H), 7.14 (dd, J = 2.4, 8.3 Hz, 1H), 4.82 - 4.64 (m, 1H), 4.04 - 4.01 (m, 2H), 3.27 (br d, J = 5.6 Hz, 2H), 1.97 - 1.93 (m, 2H), 1.36 (s, 9H) LC-MS (ES+, m/z): no found [(M+H)+]. Rt=0.806 min.
Step 2: tert-Butyl (3-(3-aminophenoxy)propyl)carbamate
[00533] To a mixture of tert-butyl (3-(3-nitrophenoxy)propyl)carbamate (26 g, 87.74 mmol, 1 eq) and Fe (22.05 g, 394.85 mmol, 4.5 eq) in EtOH (400 mL) and H2O (200 mL) at 25 °C, NH4Cl (21.12 g, 394.85 mmol, 4.5 eq) was added. The mixture was stirred at 80 °C for 1 hour. LCMS showed the reaction was completed. The reaction was filtered. The filtrate was poured into H2O (100 mL), and then extracted with ethyl acetate (500 mL*3).The combined organic phase was washed with saturated brine (1000 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give tert-butyl (3-(3- aminophenoxy)propyl)carbamate (22 g, 82.60 mmol, 94.14% yield) as an off-white solid.1H NMR (400 MHz, DMSO-d6) δ = 6.98 - 6.89 (m, 2H), 6.21 - 6.16 (m, 2H), 6.13 - 6.09 (m, 1H), 5.10 - 5.02 (m, 2H), 3.90 (t, J = 6.3 Hz, 2H), 3.11 (q, J = 6.8 Hz, 2H), 1.84 (quin, J = 6.6 Hz, 2H), 1.44 (s, 9H); LC-MS (ES+, m/z): 267.3 [(M+H)+]; Rt=0.271 min Step 3: tert-Butyl (3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino) phenoxy)propyl)carbamate
[00534] To a solution of 3,5-dichloro-6-ethylpyrazine-2-carboxamide (3 g, 13.63 mmol, 1 eq), tert-butyl (3-(3-aminophenoxy)propyl)carbamate (2.18 g, 8.18 mmol, 0.6 eq) in 1,4-dioxane (30 mL) at 25 °C, DIPEA (17.62 g, 136.33 mmol, 23.75 mL, 10 eq) was added. The mixture was stirred at 110 °C for 10 hrs under N2. LCMS indicated the reaction was complete. The mixture was poured into water (450 mL) and extracted with EtOAc (300 mL*2). The organic layers was washed with water (300 mL*2), saturated brine (300 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1/1) to give tert- butyl (3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenoxy)propyl)carbamate (7.39 g, 16.42 mmol, 26.19% yield) as yellow solid. 1H NMR (400 MHz, CHLOROFORM-d) δ = 10.84 - 10.82 (m, 1H), 10.83 (s, 1H), 7.75 (br d, J = 2.6 Hz, 1H), 7.43 (t, J = 2.0 Hz, 1H), 7.22 (td, J = 8.2, 16.6 Hz, 2H), 6.64 (td, J = 1.1, 8.0 Hz, 1H), 6.43 (br s, 1H), 5.56 (br s, 1H), 4.91 - 4.44 (m, 1H), 4.07 (t, J = 5.8 Hz, 2H), 3.57 - 3.41 (m, 2H), 2.92 - 2.76 (m, 5H), 2.02 (quin, J = 6.2 Hz, 2H), 1.46 (s, 9H), 1.36 (br d, J = 7.1 Hz, 3H), 1.30 (t, J = 7.5 Hz, 3H); LC-MS (ES+, m/z): 450.2 [(M+H)+]; Rt=0.935 min
Step 4: 3-((3-(3-Aminopropoxy)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide
[00535] To a solution of tert-butyl (3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)carbamate (4.09 g, 9.09 mmol, 1 eq) and HCl/MeOH (4 M, 150 mL, 66.00 eq) was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was concentrated to give 3-((3-(3-aminopropoxy)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide (3.54 g, crude) as yellow solid. LC-MS (ES+, m/z): 350.2 [(M+H)+]; Rt=0.678 min, Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 5: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00536] To a solution of 3-((3-(3-aminopropoxy)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide (3.5 g, 10.01 mmol, 1 eq), TCFH (4.21 g, 15.01 mmol, 1.5 eq), 1-methylimidazole (8.21 g, 100.05 mmol, 7.98 mL, 10 eq) in DMF (35 mL) at 25 °C, N-(tert-butoxycarbonyl)-N-methyl-L-alanine (3.05 g, 15.01 mmol, 1.5 eq) was added. The mixture was stirred at 25 °C for 1 h. LCMS indicated the reaction was completed. The mixture was poured into water (100 mL) and extracted with EtOAc (70 mL*2). The combined organic layers was washed with saturated brine (70 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1/1) to give crude product. The crude was purified by prep-HPLC column: Welch Xtimate C18250*70mm#10um;mobile phase: [water( NH4HCO3)-ACN];B%: 35%- 70%,20min to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1.14 g, 21.3 mmol, 21.30% yield) as yellow solid.1H NMR (400 MHz, CHLOROFORM-d) δ = 10.83 (s, 1H), 7.75 (br d, J = 2.6 Hz, 1H), 7.43 (t, J = 2.0 Hz, 1H), 7.22 (td, J = 8.2, 16.6 Hz, 2H), 6.64 (td, J = 1.1, 8.0 Hz, 1H), 6.43 (br s, 1H), 5.56 (br s, 1H), 4.91 - 4.44 (m, 1H), 4.07 (t, J = 5.8 Hz, 2H), 3.57 - 3.41 (m, 2H), 2.92 - 2.76 (m, 5H), 2.02 (quin, J = 6.2 Hz, 2H), 1.46 (s, 9H), 1.36 (br d, J = 7.1 Hz, 3H), 1.30 (t, J = 7.5 Hz, 3H) LC-MS (ES+, m/z): 535.3 [(M+H)+]; Rt=3.358 min. HRMS (EI): m/z [M+H]+: 535.2445
Intermediate 1’ 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00537] A mixture of 3,5-dichloro-6-ethylpyrazine-2-carboxamide (45 g, 204.49 mmol, 1 eq) and HCl/MeOH (4 M, 1000 mL, 19.56 eq) was stirred at 70 °C for 10 hrs. LCMS indicated the reaction was completed. The mixture was concentrated. The residue was diluted with saturated NaHCO3 (1000 mL) and extracted with EtOAc (500 mL* 2). The organic layers were combined, washed with water (100 mL * 2), saturated brine 1000 mL, dried with anhydrous Na2CO3, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc = 100/1) to give methyl 3,5-dichloro-6-ethyl-pyrazine-2-carboxylate (36 g, 153.15 mmol, 74.89% yield) as yellow oil.1H NMR (400 MHz, CDCl3) δ = 3.95 (s, 3H), 2.94 (q, J = 7.5 Hz, 2H), 1.27 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 235.1 [(M+H)+]. Rt=0.759 min Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 2: methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylate
[00538] A mixture of methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate (36 g, 153.15 mmol, 1 eq), tetrahydro-2H-pyran-4-amine (30.98 g, 306.30 mmol, 2 eq), Et3N (77.48 g, 765.74 mmol, 106.58 mL, 5 eq) and DMF (450 mL) was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was completed. The mixture was concentrated, diluted with saturated NaHCO3 (300 mL) and extracted with EtOAc (300 mL*2). The combined organic layers was washed with H2O (100 mL*2), saturated brine (100 mL*2), filtered, dried over anhydrous Na2SO4, filtered and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=100/1to 1/1) to give methyl 3-chloro-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylate (39 g, 130.11 mmol, 84.96% yield) as white solid. 1H NMR (400 MHz, DMSO- d6) δ = 4.75 (br d, J = 6.7 Hz, 1H), 4.24 - 4.11 (m, 1H), 4.01 - 3.91 (m, 2H), 3.87 (s, 3H), 3.50 (dt, J = 2.0, 11.7 Hz, 2H), 2.60 (q, J = 7.5 Hz, 2H), 1.99 (br dd, J = 2.2, 12.5 Hz, 2H), 1.62 - 1.43 (m, 2H), 1.24 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 300.2 [(M+H)+]. Rt=0.734 min. Step 3: 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00539] A mixture of methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxylate (10 g, 33.36 mmol, 1 eq) and NH3 in MeOH(7 M, 314 mL, 65.95 eq) was stirred at 100 °C for 10 hrs in autoclave. LCMS indicated the reaction was completed. The mixture was concentrated to give crude product 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (5.5 g, crude) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 7.57 (s, 1H), 7.28 (s, 1H), 7.03 (d, J=7.6 MHz, 1H), 4.08-3.96 (m, 1H), 3.85-3.80 (m, 2H), 3.46-3.32 (t, J=10 MHz, 2H), 2.59-2.57 (q, 2H), 1.84-1.83 (m, 2H), 1.67-1.58 (m, 2H), 1.19-1.96 (t, J=7.2 MHz, 3H). LC-MS (ES+, m/z): 285.2 [(M+H)+]. Rt=0.625 min. Intermediate 2 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: (3-bromo-5-methoxyphenyl)methanol
[00540] To a solution of 3-bromo-5-methoxybenzoic acid (22.5 g, 97.38 mmol, 1 eq) in THF (100 mL) was added BH3.THF (1 M, 243.46 mL, 2.5 eq) at 0 °C. The mixture was stirred at 25 °C for 4 hrs. LCMS showed the reaction was completed. The reaction mixture was slowly added into MeOH(50 mL).Then the combined organic phase was stirred at 70 °C for 1h, filtered and concentrated in vacuum. The residue was poured into EA(200 mL) and H2O (300 mL).The aqueous phase was extracted with ethyl acetate (200 mL*3). The combined organic phase was washed with saturated brine (700 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to afford (3-bromo-5-methoxyphenyl)methanol (40 g, crude) as white oil. LC-MS (ES+, m/z): 214.9 [(M-H)-]; Rt=1.966 min. Step 2: 1-bromo-3-(bromomethyl)-5-methoxybenzene
[00541] To a solution of (3-bromo-5-methoxyphenyl)methanol (20 g, 92.14 mmol, 1 eq) in DCM (50 mL) was added tribromophosphane (49.88 g, 184.28 mmol, 2 eq).The mixture was stirred at 25 °C for 2 hrs under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was quenched by addition saturated Na2CO3200 mL at 0°C, and extracted with DCM(300 mL * 3). The combined organic layers were washed with saturated brine (300 mL * 3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford 1-bromo-3-(bromomethyl)-5- methoxybenzene (45 g, 160.74 mmol, 87.23% yield) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 7.24 (s, 1H), 7.10 (s, 1H), 7.06 Step 3: 2-(3-bromo-5-methoxyphenyl)acetonitrile
[00542] A mixture of 1-bromo-3-(bromomethyl)-5-methoxy-benzene (25 g, 89.30 mmol, 1 eq), TBAF in THF (1 M, 105.00 mL, 1.18 eq), TMSCN (10.54 g, 106.27 mmol, 13.29 mL, 1.19 eq) in MeCN (50 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 3 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (50 mL), extracted with EA(300 mL*3).The organic phase was separated, washed with saturated brine(400 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford 2-(3-bromo-5-methoxyphenyl)acetonitrile (15 g, crude) as yellow oil. 1H NMR (400 MHz,
DMSO-d6) δ = 7.17 - 7.08 (m, 2H), 6.96 - 6.89 (m, 1H), 4.03 - 3.98 (m, 2H), 3.78 - 3.75 (m, 3H); LC-MS (ES+, m/z):no found [(M+H)+]; Rt=0.774 min. Step 4: tert-butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate
[00543] A mixture of 2-(3-bromo-5-methoxyphenyl)acetonitrile (11 g, 48.66 mmol, 1 eq) , tert-butyl carbamate (6.84 g, 58.39 mmol, 1.2 eq), Pd(OAc)2 (546.20 mg, 2.43 mmol, 0.05 eq), XPhos (2.32 g, 4.87 mmol, 0.1 eq) and Cs2CO3 (22.19 g, 68.12 mmol, 1.4 eq) in dioxane (30 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 100 °C for 4 hrs under N2 atmosphere. LCMS showed the reaction was completed. The residue was poured into saturated EDTA (50 mL), EA(30 mL) and stirred for 60 min. The aqueous phase was extracted with ethyl acetate (100 mL*2).The combined organic phase was washed with saturated brine (100 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford tert-butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate (4.9 g, crude) as yellow solid. LC-MS (ES+, m/z): 207.1[(M+H)+]; Rt=0.661 min. Step 5: 2-(3-amino-5-methoxyphenyl)acetonitrile
[00544] A mixture of tert-butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate (4.9 g, 18.68 mmol, 1 eq) in HCl/EtOAc (4M, 10 mL, 2.14 eq) was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (100 mL), extracted with EA(50 mL *3).The organic phase was separated, washed with saturated brine(100 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford 2-(3-amino-5-methoxyphenyl)acetonitrile (1.7 g, crude) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 6.11 (s, 1H), 6.05 (s, 1H), 6.01 (s, 1H), 5.24 (br s, 2H), 3.81 - 3.74 (m, 2H), 3.31 (s, 3H), 1.27 - 1.01 (m, 1H). LC-MS (ES+, m/z): 163.1[(M+H)+]; Rt=0.177 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M).
Step 6: 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00545] To a solution of 2-(3-amino-5-methoxyphenyl)acetonitrile (200 mg, 1.23 mmol, 1 eq),3-chloro- 6-ethyl-5-(tetrahydropyran-4-ylamino)pyrazine-2-carboxamide (351.12 mg, 1.23 mmol, 1 eq), t-AmylOH (5 mL) was added Xantphos (71.35 mg, 123.31 µmol, 0.1 eq) ,Cs2CO3 (1.81 g, 5.55 mmol, 4.5 eq) and Xantphos Pd G4 (106.11 mg, 123.31 µmol, 0.1 eq).The mixture was stirred at 100 °C for 3 hrs under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into saturated EDTA (10 mL), EA (10 mL) and stirred 60 min. The residue and extracted with EA (10 mL*3). The combined organic layers were washed with saturated brine (5 mL*3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford 3-((3-(cyanomethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 243.62 µmol, 19.76% yield) as yellow solid. LC-MS (ES+, m/z): 411.1 [(M+H)+]; Rt=0.738 min. Step 7: 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00546] To a solution of 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (100 mg, 243.62 µmol, 1 eq), NH3.H2O (121.97 mg, 1.22 mmol, 134.03 µL, 35% purity, 5 eq) in THF (3 mL) was added Raney-Ni (20.87 mg, 243.62 µmol, 1 eq) under N2 atmosphere. The suspension was degassed and purged with H2 for 3 times. The mixture was stirred under H2 (491.10 µg, 243.62 µmol, 1 eq, 50 PSI) at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 15%- 45%,8min) to afford 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (30 mg, 56.76 µmol, 23.30% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.28 - 11.22 (m, 1H), 7.83 - 7.65 (m, 3H), 7.61 - 7.55 (m, 1H), 7.54 - 7.51 (m, 1H),
7.33 - 7.24 (m, 1H), 6.90 - 6.81 (m, 1H), 6.77 - 6.71 (m, 1H), 6.47 - 6.40 (m, 1H), 4.17 - 4.04 (m, 1H), 3.97 - 3.92 (m, 1H), 3.91 - 3.88 (m, 1H), 3.79 - 3.73 (m, 3H), 3.43 - 3.37 (m, 2H), 3.12 - 3.00 (m, 2H), 2.83 - 2.75 (m, 2H), 2.62 - 2.54 (m, 2H), 1.90 - 1.81 (m, 2H), 1.71 - 1.57 (m, 2H), 1.18 (t, J = 7.3 Hz, 3H);1H NMR (400 MHz, DMSO-d6,TFA) δ = 7.52 (t, J = 2.1 Hz, 1H), 6.74 (s, 1H), 6.45 (s, 1H), 4.14 - 4.04 (m, 1H), 3.96 - 3.87 (m, 2H), 3.80 - 3.73 (m, 3H), 3.49 - 3.28 (m, 2H), 3.12 - 2.95 (m, 2H), 2.85 - 2.75 (m, 2H), 2.61 - 2.53 (m, 2H), 1.85 (br dd, J = 2.3, 12.6 Hz, 2H), 1.64 (dq, J = 4.4, 12.0 Hz, 2H), 1.17 (t, J = 7.3 Hz, 3H) LC-MS (ES+, m/z): 415.1 [(M+H)+]; Rt=1.901 min;HRMS:415.2488. Intermediate 1”
(S)-6-ethyl-3-((3-methoxy-5-(2-(2-(N-methylacrylamido)propanamido) ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin- 2-yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00547] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (400 mg, 965.02 µmol, 1 eq) in DMF (8 mL) was added DIPEA (1.19 g, 9.19 mmol, 1.60 mL, 9.52 eq), HOBt (130.40 mg, 965.02 µmol, 1 eq), EDCI (277.49 mg, 1.45 mmol, 1.5 eq) and N-(tert-butoxycarbonyl)-N-methyl-L-alanine (294.19 mg, 1.45 mmol, 1.5 eq).The mixture was stirred at 25 °C for 4 hrs. LC-MS showed the reaction was completed. The reaction was poured into water (5 mL) and extracted with EtOAc(10 mL*3). The organic layers were combined, washed with water (3 mL*3), sat brine (3 mL*3), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum
ether/EtOAc = 1/3) to afford tert-butyl (S)-(1-((3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl) amino)-3-oxopropyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (340 mg, 566.93 µmol, 58.75% yield) as yellow oil. LC-MS (ES+, m/z): 600.3[(M+H)+]; Rt=0.823 min. Step 2:(S)-6-ethyl-3-((3-methoxy-5-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00548] A mixture of (S)-6-ethyl-3-((3-methoxy-5-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (420 mg, 700.33 µmol, 1 eq) in HCl/MeOH (4 M, 106 mL, 606.63 eq) was stirred at 25 °C for 1 hr. LC-MS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford (S)-6-ethyl-3-((3-methoxy-5-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (390 mg, crude, HCl) as yellow solid. LC-MS (ES+, m/z): 500.3[(M+H)+]; Rt=0.645 min. Note:HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Intermediate 6 tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
Step 1: tert-butyl (3-amino-5-methoxyphenethyl)carbamate
[00549] To a solution of Ni (723.77 mg, 12.33 mmol, 1 eq) in THF (50 mL) at 25 °C, 2-(3-amino-5- methoxyphenyl)acetonitrile (2 g, 12.33 mmol, 1 eq) (Boc)2O (2.69 g, 12.33 mmol, 2.83 mL, 1 eq) DIPEA (3.19 g, 24.66 mmol, 4.30 mL, 2 eq) was added. The mixture was stirred at 25 °C under 50 psi of H2 for 2 hrs. TLC indicated one major new spot with larger polarity was detected. The crude mixture was concentrated under reduced pressure. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 3/1). To afford tert-butyl (3-amino-5-methoxyphenethyl)carbamate (1.3 g, 4.88 mmol, 39.58% yield) As white solid.1H NMR (400 MHz, DMSO-d6) δ = 6.81 (br t, J = 5.4 Hz, 1H), 6.00 - 5.96 (m, 2H), 5.92 (s, 1H), 4.98 (s, 2H), 3.63 (s, 3H), 3.11 - 3.01 (m, 2H), 2.49 - 2.45 (m, 2H), 1.38 (s, 9H). Step 2: tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)carbamate
[00550] To a solution of tert-butyl (3-amino-5-methoxyphenethyl)carbamate (1.65 g, 7.51 mmol, 1 eq) , 3,5-dichloro-6-ethylpyrazine-2-carboxamide (2 g, 7.51 mmol, 1 eq) in872-50-4 (5mL) was added DIPEA (19.41 g, 150.19 mmol, 26.16 mL, 20 eq).The mixture was stirred at 140°C for 24h under N2. LCMS showed the reaction was completed. The reaction was poured into water (30 mL) and extracted with EtOAc(20 mL*3 ). The organic layers were combined, washed with water (50 mL*2), sat. brine (100 mL), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (Petroleum ether /Ethyl acetate/Dichloromethane=2/1/1). To afford tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)-5-methoxyphenethyl)carbamate (1.93 g, 4.01 mmol, 53.40% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 8.33 (s, 1H), 8.11 (s, 1H), 7.42 (s, 1H), 6.92 (br t, J = 5.3 Hz, 1H), 6.86 (s, 1H), 6.54 (s, 1H), 3.81 (s, 3H), 3.21 (q, J = 6.6 Hz, 2H), 3.30 – 3.26 (m, 2H), 2.81-2.79 (m, 2H) 2.50-2.48(m, 2H),1.42 (s, 9H), 1.32 (t, J = 7.5 Hz, 4H). LC-MS (ES+, m/z): 351.4[(M+H)+]; Rt=0.824 min.
Step 3: 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide
[00551] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)carbamate (1.93 g, 3.43 mmol, 80% purity, 1 eq) in HCl/EtOAc (100 mL).The mixture was stirred at 25°C for 2h. LCMS showed the reaction was completed. The crude mixture was worked up by filtration. The crude product was purified by re-crystallization from EtOAc (20 mL) at 25°C. to afford 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide (1.3 g, 3.30 mmol, 96.11% yield, HCl) as yellow solid. LC-MS (ES+, m/z): 350.1[(M+H)+]; Rt=0.698 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 4: tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00552] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-5-chloro-6-ethylpyrazine-2- carboxamide (1.3 g, 3.65 mmol, 98.2% purity, 1 eq) , N-(tert-butoxycarbonyl)-N-methyl-L-alanine (1.11 g, 5.47 mmol, 1.5 eq) in DMF (10 mL) was added BOP (1.54 g, 5.47 mmol, 1.5 eq), DIPEA (3.00 g, 36.49 mmol, 2.91 mL, 10 eq) .The mixture was stirred at 25 °C for 10 hrs under N2. LCMS showed the reaction was completed. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/2). To afford tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (1.84 g, 2.48 mmol, 67.85% yield) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 11.22 (s, 1H), 8.28 (s, 1H), 8.06 (s, 1H), 7.81 (br s, 1H), 7.34 (s, 1H), 6.85 (s, 1H), 6.50 (s, 1H), 4.55-4.52 (m, 1H), 3.76 (s, 3H), 3.30 - 3.24 (m, 2H), 2.90 - 2.78 (m, 2H), 2.74 - 2.66 (m, 5H), 1.36 (br s, 9H), 1.28 - 1.11 (m, 6H). LC-MS (ES+, m/z): 435.2[(M+H)+]; Rt=0.884 min; HRMS:435.1911.
Intermediate 7 tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate
Step 1: tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)carbamate
[00553] To a solution of tert-butyl (3-aminophenethyl)carbamate (2.25 g, 9.52 mmol, 1 eq) 3,5-dichloro- 6-ethylpyrazine-2-carboxamide (2.10 g, 9.52 mmol, 1 eq) in dioxane (20 mL) at 25 °C, DIPEA (12.31 g, 95.21 mmol, 16.58 mL, 10 eq) was added. The mixture was stirred at 130 °C for 10hrs. LCMS indicated the reaction was completed. The mixture was poured into water (40 mL) and extracted with EtOAc(20 mL*2). The organic layers was washed with water(40 mL*2), saturated brine(80 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1 ) to afford tert-butyl (3-((3- carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)carbamate (3 g, 4.79 mmol, 50.27% yield) as yellow oil. LC-MS (ES+, m/z): 420.2 [(M+H)+]; Rt=0.939 min.
Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide
[00554] The mixture tert-butyl N-[2-[3-[(3-carbamoyl-6-chloro-5-ethyl-pyrazin-2- yl)amino]phenyl]ethyl]carbamate (2 g, 4.76 mmol, 1 eq) and HCl/EtOAc (4 M, 50 mL, 41.99 eq) was stirred at 25 °C for 2hrs. LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1) to afford 3-((3-(2-aminoethyl)phenyl)amino)-5-chloro-6-ethylpyrazine-2- carboxamide (1.38 g, 4.32 mmol, 90.60% yield) as yellow solid. LC-MS (ES+, m/z): 320.2[(M+H)+]; Rt=0.671 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 3: tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate
[00555] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide (1.38 g, 4.32 mmol, 1 eq), TCFH (1.82 g, 6.47 mmol, 1.5 eq) NMI (3.54 g, 43.15 mmol, 10 eq) in DMF (15 mL) at 25°C, N-(tert-butoxycarbonyl)-N-methyl-L-alanine (1.32 g, 6.47 mmol, 1.5 eq) was added. The mixture was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was completed. The mixture was poured into water (30 mL) and extracted with EtOAc(15 mL*2). The organic layers was washed with water (30 mL*2), saturated brine (30 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1 ) to afford tert-butyl N-[(1S)-2-[2-[3-[(3-carbamoyl-6-chloro-5-ethyl- pyrazin-2-yl)amino]phenyl]ethylamino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate (2.55 g, crude) as yellow oil. LC-MS (ES+, m/z): 505.2[(M+H)+]; Rt=7.177 min.
Intermediate 8 tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5-fluorophenethyl)amino)- 1-oxopropan-2-yl)(methyl)carbamate
Step 1: (3-bromo-5-fluorophenyl)methanol
[00556] To a solution of 3-bromo-5-fluorobenzoic acid (50 g, 228.30 mmol, 1 eq) in THF (500 mL) at 0°C, BH3.THF (1 M, 570.76mL, 2.5 eq) was added. The mixture was allowed to warm to 25°C for 4 hrs. LCMS indicated the reaction was completed. The reaction mixture was slowly added into MeOH (300 mL) at 0 oC. Then the combined organic phase was stirred at 70 °C for 1 h, filtered and concentrated in vacuum. The residue was poured into EtOAc (500 mL) and H2O (1 L).The aqueous phase was separated and extracted with ethyl acetate (600 mL*3). The combined organic phase was washed with saturated brine (600 mL*3), dried with anhydrous Na2SO4, filtered and concentrated to give (3-bromo-5-fluoro- phenyl)methanol (50 g, crude) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 7.49 - 7.36 (m, 2H), 7.17
(dd, J = 1.0, 9.7 Hz, 1H), 5.45 (t, J = 5.8 Hz, 1H), 4.52 (d, J = 5.8 Hz, 2H). LC-MS (ES+, m/z): 202.9[(M- H)-]; Rt=1.493 min Step 2: 1-bromo-3-(bromomethyl)-5-fluorobenzene
[00557] To a solution of (3-bromo-5-fluoro-phenyl)methanol (50 g, 243.87 mmol, 1 eq)in DCM (500 mL) was added PBr3 (132.03 g, 487.75 mmol, 2 eq) .The mixture was stirred at 25 °C for 2 hrs under N2 atmosphere. TLC indicated the reaction was completed. The mixture was concentrated. The residue was diluted with saturated NaHCO3(800 mL) and extracted with EtOAc (800 mL * 2).The organic layers were combined, washed with water (800 mL*2), saturated brine (800 mL), dried with anhydrous Na2SO4, filtered and concentrated to give 1-bromo-3-(bromomethyl)-5-fluorobenzene (60 g, crude) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 7.47 (s, 1H), 7.46 - 7.41 (m, 1H), 7.32 - 7.25 (m, 1H), 4.62 (s, 2H) Step 3: 2-(3-bromo-5-fluorophenyl)acetonitrile
[00558] To a solution of 1-bromo-3-(bromomethyl)-5-fluorobenzene (50 g, 186.62 mmol, 1 eq) and TMSCN (24.07 g, 242.61 mmol,30.35 mL, 1.3 eq) in CH3CN (600 mL) at 25 °C, TBAF in THF (1 M, 242.61 mL, 1.3 eq) was added. The mixture was stirred at 25°C for 5 hrs. TLC indicated the reaction was completed. The mixture was concentrated. The residue was diluted with H2O (1000 mL) and extracted with EtOAc (800 mL* 2).The organic layers were combined, washed with water (800 mL*2), saturated brine (800 mL), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc = 20/1) to give 2-(3- bromo-5-fluorophenyl)acetonitrile (29.1 g, 135.96 mmol, 72.85% yield) as yellow oil.1H NMR (400 MHz, DMSO-d6) δ = 7.54 (td, J = 2.0, 8.4 Hz, 1H), 7.46 (s, 1H), 7.28 (br d, J = 9.4 Hz, 1H), 4.10 (s, 2H) Step 4: tert-butyl (3-(cyanomethyl)-5-fluorophenyl)carbamate
[00559] A mixture of 2-(3-bromo-5-fluorophenyl)acetonitrile (10 g, 46.72 mmol, 1 eq), tert-butyl carbamate (8.21 g, 70.08 mmol, 1.5 eq), t-Bu Xphos (991.99 mg, 2.34 mmol, 0.05 eq), tBuXPhos Pd G3 (1.86 g, 2.34 mmol, 0.05 eq) and Cs2CO3 (30.45 g, 93.44 mmol, 2 eq) in toluene (100 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 100 °C for 10 hrs under N2 atmosphere. LC-MS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by column
chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to afford tert-butyl (3- (cyanomethyl)-5-fluorophenyl)carbamate (9 g, 35.96 mmol, 76.97% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 9.70 (s, 1H), 7.34 (s, 1H), 7.25 (br d, J = 11.5 Hz, 1H), 6.77 (br d, J = 8.8 Hz, 1H), 4.03 (s, 2H), 1.48 (s, 9H). LC-MS (ES+, m/z): 251.2 [(M+H)+]; Rt=0.795 min. Step 5: 2-(3-amino-5-fluorophenyl)acetonitrile
[00560] A mixture of tert-butyl N-[3-(cyanomethyl)-5-fluoro-phenyl]carbamate (9 g, 35.96 mmol, 1 eq) in HCl/EtOAc (4 M, 99.96 mL, 11.12 eq) was stirred at 25 °C for 2 hrs. LC-MS showed reaction was completed. The reaction mixture was poured into saturated Na2CO3 (50 mL) and extracted with EA 150 mL (50 mL * 3). The combined organic layers were washed with saturated brine 60 mL (20 mL *3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford 2-(3-amino-5- fluorophenyl)acetonitrile (4.3 g, crude) as yellow oil. LC-MS (ES+, m/z): 151.2[(M+H)+]; Rt=0.120 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 6: 3-(2-aminoethyl)-5-fluoroaniline
[00561] To a solution of 2-(3-amino-5-fluoro-phenyl)acetonitrile (4.3 g, 28.64 mmol, 1 eq) and NH3.H2O (4.55 g, 45.44 mmol, 5.00 mL, 35% purity, 1.59 eq) in THF (100 mL) was added Raney-Ni (15.00 g, 175.08 mmol, 6.11 eq) under N2 atmosphere. The suspension was degassed and purged with H2 for 3 times. The mixture was stirred under 50 Psi of H2 (57.85 mg, 28.64 mmol, 1 eq) at 25 °C for 2 hrs. LC-MS showed reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford 3-(2-aminoethyl)-5-fluoroaniline (4.3 g, crude) as yellow oil. LC-MS (ES+, m/z):155.1[(M+H)+]; Rt=0.146 min. Step 7: tert-butyl (3-amino-5-fluorophenethyl)carbamate
[00562] A mixture of 3-(2-aminoethyl)-5-fluoroaniline (4.3 g, 27.89 mmol, 1 eq), (Boc)2O (6.09 g, 27.89 mmol, 6.41 mL, 1 eq), DIPEA (7.21 g, 55.78 mmol, 9.72 mL, 2 eq) in DCM (50 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 10 hrs under N2 atmosphere. LC-MS showed the reaction was completed. The reaction mixture was concentrated under reduced
pressure to remove DCM. The residue was diluted with H2O 10 mL and extracted with EA (30 mL * 3). The combined organic layers were washed with saturated brine (100 mL * 1), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to afford tert-butyl N-[2-(3- amino-5-fluoro-phenyl)ethyl]carbamate (3.4 g, 13.37 mmol, 47.94% yield) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 6.91 - 6.76 (m, 1H), 6.24 - 6.03 (m, 3H), 5.37 - 5.25 (m, 2H), 3.19 - 3.15 (d, 1H), 3.11 - 3.03 (m, 2H), 2.57 - 2.52 (m, 1H), 1.42 - 1.34 (m, 9H). LC-MS (ES+, m/z): 155.2[(M+H-100)+], 199.2[(M+H-56)+]; Rt=0.666 min. Step 8: tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)carbamate
[00563] To a solution of tert-butyl (3-amino-5-fluorophenethyl)carbamate (2 g, 7.86 mmol, 1 eq) and 3,5-dichloro-6-ethylpyrazine-2-carboxamide (1.73 g, 7.86 mmol, 1 eq) in NMP (4 mL) was added DIPEA (40.66 g, 314.59 mmol, 54.80 mL, 40 eq).The mixture was stirred at 140 °C for 36 hrs. LC-MS showed the reaction was completed. The reaction mixture was poured into H2O (15 mL), filtered to give a residue. The residue was diluted with EA 15 mL and poured into H2O 15 mL, then extracted with EA (15 mL * 3). The organic phase was separated, washed with saturated brine (10 mL*3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert-butyl (3-((3-carbamoyl- 6-chloro-5-ethylpyrazin-2-yl)amino)-5-fluorophenethyl)carbamate (1.78 g, 3.13 mmol, 39.86% yield, 77.12% purity) as yellow oil.1H NMR (400 MHz, DMSO-d6) δ = 11.36 (s, 1H), 8.30 (br s, 1H), 8.09 (br s, 1H), 7.65 (br d, J = 11.5 Hz, 1H), 6.98 (s, 1H), 6.87 (br t, J = 5.0 Hz, 1H), 6.71 (br d, J = 9.4 Hz, 1H), 3.19 - 3.13 (m, 2H), 2.83 (q, J = 7.4 Hz, 2H), 2.69 (br t, J = 6.9 Hz, 2H), 1.34 (s, 9H), 1.26 (t, J = 7.4 Hz, 3H). LC-MS (ES+, m/z): 438.2[(M+H)+]; Rt=0.914 min; 77.12% purity. Step 9: 3-((3-(2-aminoethyl)-5-fluorophenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide
[00564] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl) amino)-5- fluorophenethyl)carbamate (1.3 g, 2.97 mmol, 1 eq) in HCl/MeOH (4 M, 50 mL, 67.37 eq) was stirred at
25 °C for 2 hrs. LC-MS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue to afford 3-((3-(2-aminoethyl)-5- fluorophenyl)amino)-5-chloro-6-ethylpyrazine-2-carboxamide (1 g, crude, HCl) as yellow solid. LC-MS (ES+, m/z): 338.2 [(M+H)+]; Rt=0.710 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 10: tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00565] To a solution of 3-((3-(2-aminoethyl)-5-fluorophenyl)amino)-5-chloro-6-ethylpyrazine-2- carboxamide (1 g, 2.96 mmol, 1 eq) and N-(tert-butoxycarbonyl)-N-methyl-L-alanine (902.52 mg, 4.44 mmol, 1.5 eq) in DMF (15 mL) was added 1-methyl-1H-imidazole (2.43 g, 29.61 mmol, 2.36 mL, 10 eq) and chloro-N,N,N’,N’-tetramethylformamidinium hexafluorophosphate (1.25 g, 4.44 mmol, 1.5 eq).The mixture was stirred at 25 °C for 10 hrs. LC-MS showed the reaction was completed. The reaction mixture was poured into H2O (15 mL) and extracted with EA (10 mL * 3). The combined organic layers were washed with saturated brine (10 mL *3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/5) to afford tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5- ethylpyrazin-2-yl)amino)-5-fluorophenethyl) amino)-1-oxopropan-2-yl)(methyl)carbamate (1.5 g, 2.87 mmol, 96.88% yield) was obtained as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 11.42 - 11.35 (m, 1H), 8.38 - 8.05 (m, 2H), 7.96 (s, 1H), 7.82 (br t, J = 5.1 Hz, 1H), 7.70 - 7.61 (m, 1H), 7.08 - 7.00 (m, 1H), 6.76 - 6.70 (m, 1H), 3.32 (s, 3H), 2.89 (s, 2H), 2.87 (s, 2H), 2.73 (s, 2H), 1.35 (br s, 9H), 1.27 (t, J = 7.5 Hz, 3H), 1.22 - 1.16 (m, 3H). LC-MS (ES+, m/z): 415.1 [(M+H)+]; Rt=1.901 min,99.09% purity;HRMS:415.2488. Intermediate 9 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide
Scheme 5
Step 1: methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate
[00566] A mixture of 3,5-dichloro-6-ethyl-pyrazine-2-carboxamide (15 g, 68.16 mmol, 1.0 eq), HCl/MeOH (4 M, 350.03 mL, 20.54 eq) was stirred at 90 °C for 10 hrs. LCMS showed the reaction was completed. The mixture was concentrated. The residue was diluted with saturated NaHCO3 (500 mL) and extracted with EtOAc (400 mL* 2). The organic layers were combined, washed with water (300 mL*2), sat. saturated brine (300 mL), dried with anhydrous Na2CO3, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc = 100/1) TLC (plate1)Rf = 0.67) to afford methyl 3,5-dichloro-6-ethyl-pyrazine-2-carboxylate (13 g, 55.30 mmol, 81.13% yield) as a yellow oil. LC-MS (ES+, m/z): 235.1 [(M+H)+]; Rt=0.830 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 oC for 0.5 h. Step 2: 3,5-dichloro-6-ethylpyrazine-2-carboxylic acid
[00567] The mixture of methyl 3,5-dichloro-6-ethyl-pyrazine-2-carboxylate (4.8 g, 20.42 mmol, 1.0 eq) in HCl (12 M, 671.40 mL, 131.52 eq). LCMS showed the reaction was completed. The reaction was poured into H2O (100 mL). The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (100 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum to afford 3,5-dichloro-6-ethyl-pyrazine-2-carboxylic acid (3 g, 13.57 mmol, 66.47% yield) as a yellow solid. LC-MS (ES+, m/z): 221.1 [(M+H)+]; Rt=0.688 min.
Step 3: 3,5-dichloro-6-ethylpyrazine-2-carbonyl chloride
[00568] To a mixture of 3,5-dichloro-6-ethyl-pyrazine-2-carboxylic acid (1 g, 4.52 mmol, 1.0 eq) in DCM (10 mL) was added DMF (16.53 mg, 226.20 µmol, 0.05 eq) finally added (COCl)2 (1.15 g, 9.05 mmol, 2.0 eq) in one portion at 0°C under N2 for 1 hr. TLC showed the reaction was completed. The residue was concentrated in vacuum to afford 3,5-dichloro-6-ethyl-pyrazine-2-carbonyl chloride (0.8 g, 3.34 mmol, 73.84% yield) as a yellow solid. Step 4: 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide
[00569] A mixture of 3,5-dichloro-6-ethyl-pyrazine-2-carbonyl chloride (0.8 g, 3.34 mmol, 1.0 eq), methanamine;hydrochloride (451.08 mg, 6.68 mmol, 2.0 eq), and DIPEA (2.16 g, 16.70 mmol, 5.0 eq) in DCM (10 mL). The mixture was stirred at 25 °C for 2 hours. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (10 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford 3,5-dichloro-6-ethyl-N-methyl-pyrazine-2-carboxamide (500 mg, 2.14 mmol, 63.94% yield) as a brown solid. LC-MS (ES+, m/z): 234.1 [(M+H)+]; Rt=0.705 min. Intermediate 10 (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine
Step 1: tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alaninate
[00570] To a solution of tert-butyl methyl-L-alaninate hydrochloride (3 g, 15.33 mmol, 1 eq) (E)-4- (dimethylamino)but-2-enoic acid (2.79 g, 16.86 mmol, 1.1 eq) EDCI (4.41 g, 23.00 mmol, 1.5 eq) HOBt (2.07 g, 15.33 mmol, 1 eq) in DMF (30 mL) at 25°C, DIPEA (19.81 g, 153.31 mmol, 26.70 mL, 10 eq) was added. The mixture was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was completed. The mixture was poured into water (100 mL) and extracted with EtOAc(60 mL*2). The organic layers was washed with water (60 mL*2), saturated brine(60 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (Dichloromethane : Methanol =10:1 ) to afford tert-butyl (E)-N-(4-(dimethylamino)but-2- enoyl)-N-methyl-L-alaninate (2.75 g, 9.56 mmol, 62.37% yield, 94% purity) as black brown oil. LC-MS (ES+, m/z): 217.3[(M+H)+]; Rt=0.556 min. Step 2: (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine
[00571] To a solution of tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alaninate (1 g, 3.70 mmol, 1 eq) TFA (7.70 g, 67.53 mmol, 5 mL, 18.26 eq) in DCM (10 mL) at 25°C. The mixture was stirred at 25 °C for 2hrs. LCMS indicated the reaction was completed. The mixture was a concentrated under reduced pressure to give (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine (760 mg, crude) as black brown oil. LC-MS (ES+, m/z): 215.2[(M+H)+]; Rt=0.339 min. Intermediate 11 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate
[00572] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (3 g, 7.14 mmol, 1 eq) DIEA (9.23 g, 71.44 mmol, 12.44 mL, 10 eq) N- methylmethanamine (3.22 g, 39.50 mmol, 3.62 mL, 5.53 eq, HCl) and DMA (20 mL) at 25 °C, the mixture was stirred at 100°C for 10 hrs. LCMS indicated the reaction was completed. The reaction was poured into water (50 mL) and extracted with EtOAc(30 mL*3). The organic layers were combined, washed with water (10 mL*2), sat. brine (10mL), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1). To give tert-butyl (3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (1.34 g, 3.13 mmol, 43.77% yield) as yellow solid. LC-MS (ES+, m/z): 429.3[(M+H)+]; Rt=0.929 min. Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide
[00573] A mixture of tert-butyl (3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (1.3 g, 3.03 mmol, 1 eq) HCl/EtOAc (4 M, 30 mL, 39.56 eq) was stirred at 25 °C for 3 hr . LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure to give 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide (900 mg, crude, HCl) was yellow solid. LC-MS (ES+, m/z): 329.4[(M+H)+]; Rt=0.641 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Intermediate 12 (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)carbamate
[00574] A mixture of tert-butyl (3-aminophenethyl)carbamate (2 g, 8.46 mmol, 1 eq) , 3,5-dichloro-6- ethylpyrazine-2-carboxamide (1.86 g, 8.46 mmol, 1 eq) in NMP (5 mL), DIPEA (21.88 g, 169.27 mmol, 29.48 mL, 20 eq) was added at 25 °C. The mixture was stirred at 140 °C for 10 hours. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (3.5 g, 6.67 mmol, 78.79% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.19 (s, 1H), 8.26 (s, 1H), 8.04 (br s, 1H), 7.59 (br d, J = 7.9 Hz, 1H), 7.32 - 7.23 (m, 2H), 6.93 - 6.83 (m, 2H), 3.16 (q, J = 6.5 Hz, 2H), 2.82 (q, J = 7.5 Hz, 2H), 2.69 (t, J = 7.3 Hz, 2H), 1.36 (s, 9H), 1.28 - 1.24 (m, 3H) LC-MS (ES+, m/z): 420.3[(M+H)+]; Rt=0.941 min. Step 2: tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)carbamate
[00575] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (400 mg, 952.60 µmol, 1 eq) and N-methylpropan-2-amine (696.70 mg, 9.53 mmol, 992.44 µL, 10 eq) in DMA (10 mL) was added DIPEA (123.12 mg, 952.60 µmol, 165.93 µL, 1 eq) at 20 °C. The mixture was stirred at 100 °C for 10 hrs in sealed tube. LCMS indicated the reaction was complete. The reaction was poured into water(30 mL) and extracted with EtOAc(30mL*2). The organic layers were combined, washed with water (15 mL*2), saturated brine (10 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/2) to give tert-butyl (3-((3-carbamoyl-5-ethyl-6- (isopropyl(methyl)amino)pyrazin-2-yl)amino)phenethyl)carbamate (350 mg, 766.57 µmol, 80.47% yield) as yellow solid. LC-MS (ES+, m/z): 457.5[(M+H)+]; Rt=0.992 min. Step 3: 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
[00576] A solution of tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)carbamate (350 mg, 766.57 µmol, 1 eq) and HCl/MeOH (4 M, 10.94 mL, 57.07 eq) was stirred at 25 °C for 2 hrs . LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5- (isopropyl(methyl)amino)pyrazine-2-carboxamide (260 mg, crude) as yellow solid. LC-MS (ES+, m/z): 357.3 [(M+H)+]; Rt=0.716 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 4: tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00577] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5- (isopropyl(methyl)amino)pyrazine-2-carboxamide (260 mg, 729.39 µmol, 1 eq), NMI (598.85 mg, 7.29 mmol, 581.41 µL, 10 eq), N-(tert-butoxycarbonyl)-N-methyl-L-alanine (222.36 mg, 1.09 mmol, 1.5 eq) in DMF (3 mL), was added TCFH (306.98 mg, 1.09 mmol, 1.5 eq). The mixture was stirred at 0 °C for 2 hrs.
LCMS indicated the reaction was complete. The reaction was poured into water(15 mL) and extracted with EtOAc(10 mL*2). The organic layers were combined, washed with water (10 mL*2), saturated brine (5 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1) TLC( plate1 Rf= 0.75) to give tert- butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2-yl)amino)phenethyl)amino)- 1-oxopropan-2-yl)(methyl)carbamate (350 mg, 646.13 µmol, 88.59% yield) as yellow solid. LC-MS (ES+, m/z): 542.4 [(M+H)+]; Rt=0.945 min. Step 5: (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00578] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (350 mg, 646.13 µmol, 1 eq) and HCl/MeOH (4 M, 10 mL, 61.91 eq) was stirred at 15 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give (S)-6-ethyl-5- (isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino) propanamido)ethyl)phenyl) amino)pyrazine-2- carboxamide (270 mg, crude) as yellow solid. LC-MS (ES+, m/z): 442.3 [(M+H)+]; Rt=0.726 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Intermediate 13 tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl)amino)phenethyl)carbamate
Step 1: 3,5-dichloro-6-methylpyrazine-2-carboxamide
[00579] To a solution of 3,5-dichloro-2-methylpyrazine (8 g, 49.08 mmol, 1 eq) in formamide (53.05 g, 1.18 mol, 46.95 mL, 24 eq) at 25 °C, Na2S2O8 (18.70 g, 78.53 mmol, 17.00 mL, 1.6 eq) was added in batches at 90 °C. The mixture was stirred at 90 °C for 1 h. LCMS indicated the reaction was complete. The mixture was poured into water (150 mL) and extracted with DCM (100 mL*2). The organic layers was washed with water(100 mL*2), saturated brine (100 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =3:1 ) to give 3,5-dichloro-6-methylpyrazine-2-carboxamide (3 g, 14.56 mmol, 29.67% yield) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 8.27 - 8.13 (m, 1H), 8.02 (br s, 1H), 2.67 (s, 3H); LC-MS (ES+, m/z): 206.2 [(M+H)+]. Rt=0.627 min. Step 2: tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl) amino) phenethyl) carbamate
[00580] To a solution of 3,5-dichloro-6-methylpyrazine-2-carboxamide (5.3 g, 25.72 mmol, 1 eq), tert- butyl (3-aminophenethyl)carbamate (6.08 g, 25.72 mmol, 1 eq) in NMP (50 mL) at 16 °C, DIPEA (66.49 g, 514.49 mmol, 89.61 mL, 20 eq) was added. The mixture was stirred at 140 °C for 10 hrs. LCMS indicated the reaction was complete. The mixture was poured into water (150 mL) and extracted with EtOAc (100 mL*2). The organic layers was washed with water(100 mL*2), saturated brine(100 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1) TLC (plate1) to give tert-butyl (3- ((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl) amino) phenethyl) carbamate (6 g, 14.78 mmol, 57.47% yield) as yellow solid. LC-MS (ES+, m/z): 406.2 [(M+H) +]. RT=0.880 min.
Intermediate 14 (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) carbamate
[00581] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2- yl)amino)phenethyl)carbamate (3.47 g, 8.55 mmol, 1 eq), cyclopropylboronic acid (7.34 g, 85.49 mmol, 10 eq), K2CO3 (3.54 g, 25.65 mmol, 3 eq) in DMA (24 mL) and H2O (12 mL) at 16 °C, Pd(dppf)Cl2 (625.57 mg, 854.94 µmol, 0.1 eq) was added. The mixture was stirred at 100 °C for 15 hrs under N2. LCMS indicated the reaction was complete. The residue was dissolved in DCM (40 mL), scavenger (Pd) was added and then stirred at 25 °C for 1 h, and then filtered. The mixture was poured into water (120 mL) and extracted with EtOAc (80 mL*2). The organic layers was washed with water (80 mL*2), saturated brine (80 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1) give tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) carbamate (1.9 g, 4.62 mmol, 54.01% yield) as yellow solid. LC-MS (ES+, m/z): 412.2 [(M+H)+]. RT=0.893 min.
Step 2: 3-((3-(2-aminoethyl) phenyl) amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide
[00582] The mixture tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) carbamate (1.9 g, 4.62 mmol, 1 eq) and HCl/MeOH (4 M, 50 mL, 43.32 eq) was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give 3-((3-(2-aminoethyl) phenyl) amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide (1.8 g, crude) as yellow solid. LC-MS (ES+, m/z): 312.2 [(M+H) +]; RT=0.643 min. Note: HCl/MeOH (4 M): HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate
[00583] To a solution of, N-(tert-butoxycarbonyl)-N-methyl-L-alanine (1.16 g, 5.69 mmol, 1.1 eq) in DMF (15 mL), DIPEA (6.69 g, 51.75 mmol, 10 eq) 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6- methylpyrazine-2-carboxamide (1.8 g, 5.17 mmol, 1 eq, HCl) was added at 0 °C, and then BOP (3.43 g, 7.76 mmol, 1.5 eq) was added at 0 °C. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was complete. The mixture was poured into water (80 mL) and extracted with EtOAc (50 mL*2). The organic layers was washed with water(50 mL*2), saturated brine(50 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (Petroleum ether: Ethyl acetate=2:1) to afford tert-butyl (S)-(1-((3-((3- carbamoyl-6-cyclopropyl-5-methylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate (2.42 g, 4.87 mmol, 94.17% yield) as yellow solid. LC-MS (ES+, m/z): 497.3 [(M+H) +]; RT=0.860 min. Step 4: (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00584] The mixture tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1.5 g, 3.02 mmol, 1 eq) and HCl/MeOH (4 M, 50 mL, 66.21 eq) was stirred at 16°C for 1 h. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give (S)-5-cyclopropyl-6-methyl-3- ((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (1.23 g, crude) as yellow solid. LC-MS (ES+, m/z): 397.3 [(M+H) +]; RT=0.680 min. Intermediate 15 (S)-5-(isopropyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: 3,5-dichloro-6-methylpyrazine-2-carboxamide
[00585] To a solution of 3,5-dichloro-2-methylpyrazine (8 g, 49.08 mmol, 1 eq) in formamide (53.05 g, 1.18 mol, 46.95 mL, 24 eq) at 25 °C, Na2S2O8 (18.70 g, 78.53 mmol, 17.00 mL, 1.6 eq) was added in batches at 90 °C. The mixture was stirred at 90 °C for 1 h. LCMS indicated the reaction was complete. The mixture was poured into water (150 mL) and extracted with DCM (100 mL*2). The organic layers was washed with water(100 mL*2), saturated brine (100 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel
(petroleum ether/EtOAc =3:1 ) to give 3,5-dichloro-6-methylpyrazine-2-carboxamide (3 g, 14.56 mmol, 29.67% yield) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 8.27 - 8.13 (m, 1H), 8.02 (br s, 1H), 2.67 (s, 3H); LC-MS (ES+, m/z): 206.2 [(M+H)+]. Rt=0.627 min. Step 2: tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl)amino)phenethyl)carbamate
[00586] To a solution of 3,5-dichloro-6-methylpyrazine-2-carboxamide (1.7 g, 8.25 mmol, 1 eq) tert- butyl (3-aminophenethyl)carbamate (1.95 g, 8.25 mmol, 1 eq) in NMP (30 mL) at 25°C, DIPEA (31.99 g, 247.54 mmol, 43.12 mL, 30 eq) was added. The mixture was stirred at 140 °C for 15 hrs. LCMS indicated the reaction was complete. The mixture was poured into water (100 mL) and extracted with EtOAc(60 mL*2). The organic layers was washed with water(60 mL*2), saturated brine(60 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1 ) TLC to give tert-butyl (3-((3-carbamoyl- 6-chloro-5-methylpyrazin-2-yl)amino)phenethyl)carbamate (2.52 g, 6.21 mmol, 75.25% yield) as yellow solid. LC-MS (ES+, m/z): 406.3 [(M+H)+]. Rt=0.893 min. Step 3: tert-butyl (3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-methylpyrazin-2-yl) amino) phenethyl) carbamate
[00587] A solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl) amino) phenethyl) carbamate (2.5 g, 6.16 mmol, 1 eq) in DMA (30 mL) saturated with N-methylpropan-2-amine (2.25 g, 30.80 mmol, 3.21 mL, 5 eq) DIEA (7.96 g, 61.59 mmol, 10.73 mL, 10 eq) was stirred at 100 °C for 10 hr in a 100 mL of autoclave. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (400 mL), and then extracted with EtOAc (300 mL * 3). The combined organic layers were washed with saturated brine (350 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to give tert-butyl (3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5- methylpyrazin-2-yl) amino) phenethyl) carbamate as yellow solid (9 g, 18.30 mmol, 74.29% yield, 90% purity).1H NMR (400 MHz, DMSO-d6) δ = 11.10 (s, 1H), 7.77 (br d, J = 2.1 Hz, 1H), 7.61 - 7.53 (m, 1H), 7.45 - 7.35 (m, 2H), 7.23 - 7.15 (m, 1H), 6.95 - 6.82 (m, 1H), 6.81 - 6.75 (m, 1H), 4.40 - 4.30 (m, 1H),
3.16 - 3.09 (m, 2H), 2.94 - 2.85 (m, 3H), 2.69 - 2.63 (m, 2H), 2.44 (s, 3H), 1.39 - 1.32 (m, 9H), 1.21 (d, J = 6.6 Hz, 6H) LC-MS (ES+, m/z): 443.3 [(M+H) +]; Rt =0.947 min; Step 4: 3-((3-(2-aminoethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-methylpyrazine-2- carboxamide
[00588] A mixture of tert-butyl (3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-methylpyrazin-2-yl) amino) phenethyl) carbamate (9 g, 20.34 mmol, 1 eq) was added HCl/MeOH (4 M, 100 mL) was stirred at 16 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. The crude product was triturated with EtOAc at 25 oC for 10 min and then filtered to give 3-((3-(2-aminoethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-methylpyrazine- 2-carboxamide (7.7 g, 18.29 mmol, 89.94% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.13 (s, 1H), 8.12 - 8.00 (m, 3H), 7.93 - 7.67 (m, 1H), 7.60 - 7.36 (m, 3H), 7.28 - 7.23 (m, 1H), 6.88 - 6.83 (m, 1H), 4.36 - 4.28 (m, 1H), 3.07 - 2.99 (m, 2H), 2.91 - 2.85 (m, 5H), 2.44 (s, 3H), 1.23 - 1.19 (m, 6H)(HCl salt). LC-MS (ES+, m/z): 343.2 [(M+H) +]; Rt =0.691 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 5: tert-butyl (S)-(1-((3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-methylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate
[00589] To a solution of N-(tert-butoxycarbonyl)-N-methyl-L-alanine (2.49 g, 12.27 mmol, 1.2 eq), 1- methylimidazole (8.39 g, 102.21 mmol, 8.15 mL, 10 eq) in DMF (35 mL) was added 3-((3-(2-aminoethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-methylpyrazine-2-carboxamide (3.5 g, 10.22 mmol, 1 eq), and then added TCFH (3.44 g, 12.27 mmol, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (120 mL) and then extracted with EtOAc (100 mL * 3). The combined organic layers were washed with saturated brine (150 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1
to 5/1) to give tert-butyl (S)-(1-((3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-methylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate (4.1 g, 7.38 mmol, 72.22% yield, 95% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 7.84 - 7.73 (m, 2H), 7.56 (s, 1H), 7.44 - 7.37 (m, 2H), 7.24 - 7.14 (m, 1H), 6.83 - 6.75 (m, 1H), 4.41 - 4.31 (m, 1H), 4.04 - 4.01 (m, 1H), 3.31 - 3.22 (m, 2H), 2.93 - 2.86 (m, 3H), 2.72 - 2.65 (m, 5H), 2.46 - 2.41 (m, 3H), 1.42 - 1.32 (m, 9H), 1.17 (s, 9H). LC-MS (ES+, m/z): 528.4 [(M+H) +]; Rt =0.902 min. Step 6: (S)-5-(isopropyl (methyl) amino)-6-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00590] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-methylpyrazin- 2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate (4.1 g, 7.77 mmol, 1 eq) HCl/MeOH (4 M, 21.67 mL, 11.15 eq) was stirred at 0 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. The crude product was concentrated to give (S)-5-(isopropyl (methyl) amino)-6-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (4.1 g, crude, HCl).1H NMR (400 MHz, DMSO-d6) δ = 11.14 - 11.05 (m, 1H), 9.49 - 9.38 (m, 1H), 8.90 - 8.78 (m, 1H), 8.76 - 8.70 (m, 1H), 7.52 - 7.47 (m, 2H), 7.23 - 7.18 (m, 1H), 6.82 (br d, J = 7.5 Hz, 1H), 6.71 - 6.64 (m, 2H), 4.30 (s, 1H), 3.73 - 3.65 (m, 1H), 3.45 - 3.33 (m, 2H), 3.16 - 3.16 (m, 3H), 2.91 - 2.88 (m, 3H), 2.77 - 2.71 (m, 2H), 2.44 (s, 3H), 1.33 - 1.29 (m, 3H), 1.22 - 1.18 (m, 6H). LC-MS (ES+, m/z): 428.3 [(M+H) +]; Rt =0.693 min; 95.9% purity. Note: HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Example 1 (Compound 1) 3-((3-(4-Acrylamidobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
Step 1: tert-Butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)butyl)carbamate
[00591] To a solution of 6-ethyl-3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2carboxamide (500 mg, 1.40 mmol, 1 eq), tert-butyl (4-bromobutyl)carbamate (388.02 mg, 1.54 mmol, 315.47 µL, 1.1 eq) in DMF (10 mL), K2CO3 (966.76 mg, 6.99 mmol, 5 eq) was added. The mixture was stirred at 50 °C for 10 h. LCMS indicated the reaction was complete. The mixture diluted with saturated NaHCO3 (30 mL) and extracted with EtOAc (30 mL * 2). The combined organic layers was washed with H2O (10 mL*2), saturated brine (10 mL*2), filtered, dried over Na2SO4, and concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1to 1/1) to give tert-butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino) phenoxy)butyl)carbamate (380 mg, 718.82 µmol, 51.38% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 7.58 (br d, J = 2.6 Hz, 1H), 7.53 (s, 1H), 7.29 (br d, J = 2.6 Hz, 1H), 7.17 (t, J = 8.1 Hz, 1H), 6.95 (dd, J = 1.2, 8.1 Hz, 1H), 6.89 (d, J = 7.5 Hz, 1H), 6.83 (br t, J = 5.5 Hz, 1H), 6.53 (dd, J = 2.0, 8.1 Hz, 1H), 4.19 - 4.08 (m, 1H), 3.95 (br t, J = 6.1 Hz, 4H), 3.46 (br t, J = 11.1 Hz, 2H), 2.98 (q, J = 6.6 Hz, 2H), 2.60 (q, J = 7.3 Hz, 2H), 1.89 (br dd, J = 2.4, 12.5 Hz, 2H), 1.75 - 1.60 (m, 4H), 1.59 - 1.48 (m, 2H), 1.37 (s, 9H), 1.21 - 1.17 (m, 3H); LC-MS (ES+, m/z): 529.4 [(M+H)+]; Rt=0.879 min. Step 2: 3-((3-(4-Aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
[00592] The mixture of tert-butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino) phenoxy)butyl)carbamate (380 mg, 718.82 µmol, 1 eq) and HCl/EtOAc (4 M, 60.00 mL, 333.88 eq) was stirred at 25 °C for 2 h. LCMS indicated the reaction was complete. The mixture was concentrated and then purified by prep-HPLC (column: Phenomenex Luna C18, 150*30mm*5um;mobilephase: [water(TFA)-MeCN]; B%: 5%-45%, 8min) to give 3-((3-(4- aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (260 mg, 52.71 µmol, 7.33% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 7.71 (br s, 3H), 7.58 (br s, 1H), 7.44 (s, 1H), 7.29 (br s, 1H), 7.23 - 7.15 (m,1H), 7.06 (d, J = 8.2 Hz, 1H), 6.91 (br d, J = 7.3 Hz, 1H), 6.55 (dd, J = 2.0, 8.1 Hz, 1H), 4.16 - 4.10 (m, 1H), 4.02 - 3.94 (m, 4H), 3.45 (br t, J =
11.2 Hz, 2H), 2.91 - 2.82 (m, 2H), 2.64 - 2.59 (m, 2H), 1.95 - 1.86 (m, 2H), 1.81 - 1.61 (m, 6H), 1.20 (t, J =7.3 Hz, 3H)(TFA salt); LC-MS (ES+, m/z): 429.2 [(M+H)+]; Rt=2.005 min, 99.44% purity. HRMS (EI): m/z [M]+ found: 429.2604. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 3: 3-((3-(4-Acrylamidobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00593] To a solution of 3-((3-(4-aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (80 mg, 172.05 µmol, 1 eq, HCl salt), TEA (174.09 mg, 1.72 mmol, 239.47 µL, 10 eq) in DCM (3 mL) at 0 °C, acryloyl chloride (23.36 mg, 258.07 µmol, 21.04 µL, 1.5 eq) was added. The mixture was allowed to warm to 25 °C for 10 h. LCMS indicated the reaction was complete. The reaction was poured into water (5 mL) and extracted with EtOAc (10 mL*2). The organic layers were combined, washed with water (5 mL*2), saturated brine (5 mL), dried over Na2SO4, filtered and concentrated to give crude product. The crude was purified by prep-HPLC(column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-MECN]; B%: 20%-50%, 8 min) to give 3- ((3-(4-acrylamidobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (11 mg, 22.69 µmol, 13.19% yield, 99.55% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 8.11 (br t, J = 5.4 Hz, 1H), 7.58 (br d, J = 2.7 Hz, 1H), 7.53 (t, J = 2.1 Hz, 1H), 7.30 (br d, J = 2.7 Hz, 1H), 7.22 - 7.13 (m, 1H), 6.96 (dd, J = 1.6, 8.0 Hz, 1H), 6.90 (d, J = 7.5 Hz, 1H), 6.54 (dd, J = 2.1,8.1 Hz, 1H), 6.27 - 6.15 (m, 1H), 6.11 - 6.02 (m, 1H), 5.57 (dd, J = 2.4, 10.0 Hz, 1H), 4.18 - 4.07 (m, 1H), 4.01 - 3.90 (m, 4H), 3.53 - 3.41 (m, 2H), 3.24 - 3.13 (m, 2H), 2.60 (q, J = 7.4 Hz, 2H), 1.89 (br dd, J = 2.2, 12.5 Hz, 2H), 1.77 - 1.57 (m, 6H), 1.20 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 483.2 [(M+H)+]; Rt=2.491 min, 99.55% purity. HRMS (EI): m/z [M]+ found: 483.2725 [00594] The following compound was prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described for Compound 3-((3-(4- acrylamidobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4 -yl)amino)pyrazine-2-carboxamide (Compound 1):
Compound 2 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((3-(4-(vinylsulfonamido) butoxy)phenyl)amino)pyrazine-2-carboxamide
[00595] 1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 7.58 (br d, J = 2.7 Hz, 1H), 7.52 (t, J = 2.1 Hz, 1H), 7.33 - 7.25 (m, 2H), 7.21- 7.13 (m, 1H), 6.96 (dd, J = 1.5, 8.0 Hz, 1H), 6.91 (d, J = 7.5 Hz, 1H), 6.70 (dd, J = 9.9, 16.6 Hz, 1H), 6.54 (dd, J = 2.1, 8.2 Hz,1H), 6.06 - 5.93 (m, 2H), 4.18 - 4.07 (m, 1H), 3.99 - 3.92 (m, 4H), 3.50 - 3.42 (m, 2H), 2.89 (q, J = 6.8 Hz, 2H), 2.63 - 2.56 (m, 2H), 1.89 (br dd, J = 2.1, 12.5 Hz, 2H), 1.77 - 1.59 (m, 6H), 1.20 (t, J = 7.3 Hz, 3H). LCMS 519.1 [(M+H)+] (MW 518.63); HRMS 519.24. Rt= 2.596 min, 98.66%. Example 2 (Compound 5) 6-Ethyl-3-((3-(4-propiolamidobutoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
Step 1: 6-Ethyl-3-((3-(4-propiolamidobutoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00596] To a solution of 3-((3-(4-aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (80 mg, 172.05 µmol, 1 eq, HCl salt) PyBrOP (120.31 mg, 258.07 µmol, 1.5 eq) in DMF (1 mL) at 0 °C, 3-(trimethylsilyl)propiolic acid (36.70 mg, 258.07 µmol, 1.98 µL, 1.5 eq) and DIPEA (222.35 mg, 1.72 mmol,299.67 µL, 10 eq) was added. The mixture was allowed to warm to 25 °C for 10 h. LCMS indicated the reaction was complete. The mixture was filtered. The filtrate was concentrated. The crude was purified by prep-HPLC (column: Phenomenex C18 75*30mm*3um;mobile phase: [water( NH4HCO3)-MECN]; B%: 35%-65%,8min) to give 6-ethyl-3-((3- (4-propiolamidobutoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (12.7 mg, 26.43 µmol, 15.36% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H),
8.75 (br t, J = 5.5 Hz, 1H), 7.58 (br d, J = 2.9 Hz, 1H), 7.53 (t, J = 2.1 Hz,1H), 7.30 (br d, J = 2.4 Hz, 1H), 7.19 - 7.14 (m, 1H), 6.96 (dd, J = 1.5, 8.0 Hz, 1H), 6.90 (d, J = 7.4 Hz, 1H), 6.54 (dd, J = 2.1,8.2 Hz, 1H), 4.20 - 4.07 (m, 2H), 4.01 - 3.91 (m, 4H), 3.51 - 3.41 (m, 2H), 3.19 - 3.10 (m, 2H), 2.63 - 2.57 (m, 2H), 1.89 (br dd,J = 2.2, 12.5 Hz, 2H), 1.75 - 1.53 (m, 6H), 1.20 (t, J = 7.3 Hz, 3H); LC-MS (ES+, m/z): 481.3 [(M+H)+]; Rt=2.793 min, 100% purity. HRMS (EI): m/z [M]+ found: 481.2550. Example 3 (Compound 6) 3-((3-(4-(But-2-ynamido)butoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(4-(But-2-ynamido)butoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00597] To a solution of 3-((3-(4-aminobutoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (80 mg, 172.05 µmol, 1 eq), TEA (174.09 mg, 1.72 mmol, 239.47 µL, 10 eq), HATU (98.13 mg, 258.08 µmol, 1.5 eq) in DCM (3 mL) at 25 °C, but-2-ynoic acid (21.70 mg, 258.08 µmol, 21.04 µL, 1.5 eq) was added. The mixture was allowed to warm to 25 °C for 10 h. LCMS indicated the reaction was complete. The reaction was poured into water (5 mL) and extracted with DCM (3 mL*2). The organic layers were combined, washed with water (2 mL*2), saturated brine (2 mL), dried (Na2SO4), filtered, concentrated, and the purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-MECN];B%: 30%-60%,8min) to give 3-((3-(4-(but-2- ynamido)butoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (12 mg, 24.20 µmol,14.07% yield, 99.74% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 8.50 (br t, J = 5.5 Hz, 1H), 7.66 - 7.49 (m, 2H), 7.30 (br s, 1H), 7.21 - 7.14 (m, 1H), 6.96 (dd, J = 1.3, 8.1 Hz, 1H), 6.90 (br d, J = 7.5 Hz, 1H), 6.53 (dd, J = 2.1, 8.1 Hz, 1H), 4.18 - 4.10 (m, 1H), 3.95 (br t,J = 6.1 Hz, 4H), 3.46 (br t, J = 11.1 Hz, 2H), 3.11 (q, J = 6.7 Hz, 2H), 2.60 (q, J = 7.4 Hz, 2H), 1.98 - 1.84 (m, 5H), 1.76 - 1.62 (m, 4H), 1.61 - 1.54 (m, 2H), 1.25 - 1.19 (m, 3H); LC-MS (ES+, m/z): 495.2 [(M+H)+]; Rt=2.551 min, 99.74% purity. HRMS (EI): m/z [M]+ found: 495.2751
Example 4 (Compound 3) 3-((3-(3-Acrylamidopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
Step 1: tert-Butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate
[0013] To a solution of 6-ethyl-3-((3-hydroxyphenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (750 mg, 2.10 mmol, 1eq) tert-butyl (3-bromopropyl)carbamate (549.66 mg, 2.31 mmol, 252.37 µL, 1.1 eq) in DMF (30 mL), K2CO3 (1.45 g,10.49 mmol, 5 eq) was added. The mixture was stirred at 50 °C for 10 h. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (30 mL) and extracted with EtOAc (30 mL*2). The combined organic layers was washed with H2O (10 mL*2), saturated brine (10 mL*2), filtered, dried over Na2SO4, concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1to 1/1) to give tert-butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2 yl)amino)phenoxy)propyl)carbamate (650 mg, 1.26 mmol, 60.19% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 7.64 - 7.41 (m, 2H), 7.28 (br d, J = 2.3 Hz, 1H), 7.18 (t, J = 8.1 Hz, 1H), 6.98 (br d, J = 7.9 Hz, 1H), 6.87 (br d, J = 7.5 Hz, 2H), 6.53 (dd, J = 2.1, 8.1 Hz, 1H), 4.21 - 4.04 (m, 1H), 4.01 - 3.89 (m, 4H), 3.46 (br t, J = 11.1 Hz, 2H), 3.10 (q, J = 6.5 Hz, 2H), 2.60 (q, J = 7.4 Hz, 2H), 1.95 - 1.77 (m, 4H), 1.65 (dq, J = 4.4, 12.0 Hz, 2H), 1.38 (s, 9H), 1.27 - 1.15 (m, 3H); LC-MS (ES+, m/z): 515.3 [(M+H)+]; Rt=0.751 min Step 2: 3-((3-(3-Aminopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00598] A mixture of tert-butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)carbamate (650 mg, 1.26 mmol, 1 eq) and HCl/EtOAc (4 M, 105.43 mL, 333.88 eq) was stirred at 25 °C for 2 h. LCMS indicated the reaction was complete. The
mixture was filtered. the cake was dried in vacuum, and then purified by prep-HPLC (column: Phenomenex luna C1880*40mm*3 µm;mobile phase:[water(HCl)-MECN];B%: 13%-42%,7min) to give 3-((3-(3-aminopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (400 mg, 965.02 µmol, 76.40% yield) as yellow solid. 1H
NMR (400 MHz, DMSO-d6) δ = 11.29 - 11.24 (m, 1H), 8.08 - 7.85 (m, 3H), 7.70 - 7.51 (m, 1H), 7.43 - 7.38 (m, 1H), 7.36 (br s, 1H), 7.23 - 7.15 (m, 1H), 7.14 - 7.08 (m, 1H), 6.99 - 6.87 (m, 1H), 6.63 - 6.51 (m, 1H), 4.15 - 4.03 (m, 3H), 4.02 - 3.93 (m, 2H), 3.48 - 3.38 (m, 2H), 3.04 - 2.93 (m, 2H), 2.65 - 2.59 (m, 2H), 2.08 - 1.98 (m, 2H), 1.95 - 1.84 (m, 2H), 1.73 - 1.60 (m, 2H),1.25 - 1.15 (m, 3H)(HCl salt); LC-MS (ES+, m/z): 415.1 [(M+H)+]; Rt=1.960 min, 100% purity. HRMS (EI): m/z [M]+ found: 415.2434. Note: HCl/EtOAc (4 M): HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 3: 3-((3-(3-Acrylamidopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00599] To a solution of 3-((3-(3-aminopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (80 mg, 193.00 µmol, 1 eq) and TEA (195.30 mg, 1.93 mmol, 268.64 µL, 10 eq) in DCM (2 mL) was added acryloyl chloride (20.96 mg, 231.60 µmol, 18.88 µL, 1.2 eq) .The mixture was stirred at 0 °C for 0.5 hr under N2 atmosphere. LCMS showed the reaction was complete. The reaction mixture was filtered and concentrated under reduced pressure to give crude product. The crude product was purified by prep-HPLC (neutral condition:column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-MECN];B%: 30%-60%,10min) to give 3-((3-(3- acrylamidopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (12 mg, 25.48 µmol, 13.20% yield, 99.5% purity) was obtained as a white solid. 1H NMR (400 MHz, CDCl3) δ = 10.98 - 10.88 (m, 1H), 7.59 - 7.50 (m, 1H), 7.48 - 7.42 (m, 1H),7.24 - 7.16 (m, 2H), 6.56 - 6.51 (m, 1H), 6.32 - 6.24 (m, 1H), 6.14 - 6.04 (m, 1H), 6.04 - 5.95 (m, 1H), 5.68 - 5.61 (m, 1H), 5.24- 5.13 (m, 1H), 4.70 - 4.62 (m, 1H), 4.32 - 4.19 (m, 1H), 4.10 - 4.02 (m, 4H), 3.67 - 3.54 (m, 4H), 2.58 - 2.50 (m, 2H), 2.17 -2.04 (m, 4H), 1.32 (t, J = 7.4 Hz, 3H), 1.02 - 0.66 (m, 2H); LC-MS (ES+, m/z): 469.3 [(M+H)+]; Rt=2.693 min, 99.46% purity. HRMS (EI): m/z [M]+ found: 469.2561 [00600] The following compound wasprepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 3-((3-(3- acrylamidopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (Compound 3):
Compound 4 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((3-(3-(vinylsulfonamido)propoxy)phenyl)- amino)pyrazine-2-carboxamide
[00601] 1H NMR (400 MHz, DMSO-d6) δ = 11.29 - 11.21 (m, 1H), 7.62 - 7.55 (m, 1H), 7.52 - 7.47 (m, 1H), 7.42 -7.33 (m, 1H), 7.32 - 7.25 (m, 1H), 7.22 - 7.14 (m, 1H), 7.03 - 6.95 (m, 1H), 6.94 - 6.86 (m, 1H), 6.75 - 6.64 (m, 1H), 6.58 - 6.47 (m, 1H), 6.12 - 5.89 (m, 2H), 4.19 - 4.06 (m, 1H), 4.04 - 3.98 (m, 2H), 3.98 - 3.91 (m, 2H), 3.49 - 3.42 (m, 2H), 3.05 - 2.97 (m, 2H), 2.60 (q, J = 7.4 Hz, 2H), 1.94 - 1.82 (m, 4H), 1.72 - 1.57 (m, 2H), 1.23 - 1.17 (m, 3H). LCMS 505.0 [(M+H)+] (MW 504.60); HRMS 505.22. Rt= 2.525 min, 96.07% purity. Example 5 (Compound 7) 6-Ethyl-3-((3-(3-propiolamidopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-3-((3-(3-propiolamidopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00602] To a mixture of 3-((3-(3-aminopropoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (60 mg, 144.75 µmol, 1 eq), 3-trimethylsilylprop-2-ynoic acid (30.88 mg, 217.13 µmol, 1.5 eq) in DMF (1 mL) at 0 °C, PyBrOP (101.22 mg, 217.13 µmol, 1.5 eq) and DIPEA (187.08 mg, 1.45 mmol, 252.13 µL, 10 eq) was added. The mixture was allowed to warm to 25 °C for 10 h. LCMS indicated the reaction was complete. The mixture was diluted with saturated NaHCO3 (3 mL) and extracted with EtOAc (3 mL*2). The combined organic layers was washed with H2O (3 mL*2), saturated brine (3 mL*2), filtered, dried over Na2SO4, concentrated. The residue was purified by prep- HPLC (column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-
MeCN];B%: 30%-60%,8min) to give 6-ethyl-3-((3-(3-propiolamidopropoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (20 mg, 42.87 µmol, 29.62% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 8.82 (br t, J = 5.4 Hz, 1H), 7.57 (br d, J =2.6 Hz, 1H), 7.49 (t, J = 2.1 Hz, 1H), 7.31 - 7.27 (m, 1H), 7.20 - 7.14 (m, 1H), 6.98 (dd, J = 1.5, 8.0 Hz, 1H), 6.89 (d, J = 7.5 Hz, 1H), 6.52 (dd, J = 2.1, 8.1 Hz, 1H), 4.25 - 4.05 (m, 2H), 4.03 - 3.87 (m, 4H), 3.47 - 3.41 (m, 2H), 3.27 - 3.23 (m, 2H), 2.60 - 2.55 (m, 2H), 1.95 - 1.80 (m, 4H), 1.64 - 1.53 (m, 2H), 1.19 (t, J = 7.3 Hz, 3H); LC-MS (ES+, m/z): 467.0 [(M+H)+]; Rt=2.445 min, 98.16% purity. HRMS (EI): m/z [M]+ found: 467.2415 [00603] The following compound was prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 6-ethyl-3-((3-(3- propiolamidopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (Compound 7): Compound 8 3-((3-(3-(But-2-ynamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
[00604] 1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 8.57 (br t, J = 5.5 Hz, 1H), 7.58 (br s,1H), 7.50 (s, 1H), 7.30 (br s, 1H), 7.19 (t, J = 8.2 Hz, 1H), 6.99 (br d, J = 8.0 Hz, 1H), 6.90 (br d, J = 7.4 Hz, 1H), 6.53 (dd, J =2.0, 8.1 Hz, 1H), 4.20 - 4.09 (m, 1H), 4.01 - 3.88 (m, 4H), 5.47-3.44(m, 2H), 3.23 (q, J = 6.6 Hz, 2H), 2.60 (d, J = 7.4 Hz, 2H), 2.00 -1.83 (m, 7H), 1.71 - 1.58 (m, 2H), 1.20 (t, J = 7.4 Hz, 3H); MW 480.56; LCMS 481.2 [(M+H)+]; Rt=2.451 min, 100% purity; HRMS 481.2595.
General Synthetic Scheme III
wherein R4 is as described herein and n is 1 or 2. Synthesis of Intermediate II 3-((3-(3-Aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: tert-Butyl (3-(3-nitrophenyl)prop-2-yn-1-yl)carbamate
[00605] To the solution of 1-iodo-3-nitrobenzene (5.00 g, 20.1 mmol, 1 eq) and tert-butyl prop-2-yn-1- ylcarbamate (3.12 g, 20.1 mmol, 1 eq) in TEA (3.64 g, 35.9 mmol, 1.8 eq) and THF (20 mL) was added CuI (153 mg, 803 µmol, 0.04 eq) and Pd(PPh3)2Cl2 (282 mg, 402 µmol, 0.02 eq). The mixture was stirred at 20 °C for 16 h under N2. TLC showed no 1-iodo-3-nitrobenzene was remained and a new spot was
detected. The mixture was poured into saturated solution of NH4Cl (100 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (50 mL), dried over Na2SO4, filtered and concentrated in vacuum. The residue was purified by SiO2, Petroleum ether/Ethyl acetate=30/1, 0/1) to give tert-butyl (3-(3-nitrophenyl)prop-2-yn-1- yl)carbamate (5 g, 18.10 mmol, 90.13% yield) as light yellow solid, Confirmed by 1H NMR. TLC (PE: EA=4:1, SM=0.80, TM=0.43). 1H NMR (400 MHz, DMSO-d6) δ =8.22 (d, J=8.0 Hz, 1H), 8.16 (s, 1H), 7.85 (d, J=8.0 Hz, 1H), 7.70-7.66 (m, 1H), 7.41 (s, 1H), 4.04-4.01 (m, 2H), 1.41 (s, 9H); LC-MS (ES+ ,m/z): no found [(M+H)+]; Rt= no found min. Step 2: tert-Butyl (3-(3-aminophenyl)prop-2-yn-1-yl)carbamate
[00606] To the solution of tert-butyl (3-(3-nitrophenyl)prop-2-yn-1-yl)carbamate (5.00 g, 18.1 mmol, 1 eq) and NH4Cl (387 mg, 7.24 mmol, 4 eq) in EtOH (20 mL) and H2O (40 mL) was added Fe (3.03 g, 54.3 mmol, 3 eq) in portions at 80 °C. The mixture was stirred at 80 °C for 3 hr. TLC showed the reaction was completed. The mixture was filtered and concentrated. The residue was poured into H2O (100 mL). The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (100 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by silica gel column (PE/EA = 10/1 to 0/1). tert-butyl (3-(3- aminophenyl)prop-2-yn-1-yl)carbamate (3.8 g, 15.4 mmol, 85.3% yield) was obtained as yellow oil. TLC (PE:EA=4:1, SM=0.43, TM=0.24).1H NMR (400 MHz, DMSO- d6) δ =7.30 (s, 1H), 6.98-6.94 (m, 1H), 6.56-6.48 (m, 3H), 5.16 (s, 2H), 3.91 (d, J=5.6 MHz, 2H), 1.38 (s, 9H); LC-MS(ES+, m/z): no found [(M+H)+]; Rt= no found min. Step 3: tert-Butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenyl)prop-2-yn-1-yl)carbamate
[00607] To the solution of tert-butyl(3-(3-aminophenyl)prop-2-yn-1-yl)carbamate (1.04 g, 4.21 mmol, 1.5 eq) and 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (0.8 g, 2.81 mmol, 1 eq), t-AmylOH (12 mL) was added Cs2CO3 (1.83 g, 5.62 mmol, 2 eq), XPhos (134 mg, 281
µmol, 0.1 eq), XPhos Pd G3 (238 mg, 281 µmol, 0.1 eq). The mixture was stirred at 130 °C for 4 h under microwave. LCMS showed the reaction was completed. The residue was poured into saturated solution EDTA (100 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (100 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by silica gel column (PE/EA = 5/1 to 0/1) to give tert-butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenyl)prop-2-yn-1-yl)carbamate (1.00 g, 1.82 mmol, 32.4% yield, 90% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ =11.29 (s, 1H), 7.97 (s, 1H), 7.57 (s, 1H), 7.32-7.23 (m, 4H), 6.97-6.90 (m, 2H), 4.08-3.96 (m, 1H), 3.95-3.91 (m, 4H), 3.46-3.32 (m, 2H), 2.59-2.57 (m, 2H), 1.84-1.83 (m, 2H), 1.67-1.58 (m, 2H), 1.37 (s, 9H), 1.19-1.96 (m, 3H); LC-MS(ES+,m/z): 495.3 [(M+H)+]; Rt= 2.605 min. Step 4: 3-((3-(3-Aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00608] To the solution of tert-butyl (3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)carbamate (0.03 g, 60.7 µmol, 1 eq) in EA (1 mL) was added HCl/EA (1 mL, 4 M from WuXi EHS). The mixture was stirred at 20 °C for 1 h. LCMS showed the reaction was completed. The solvent was removed. the crude product was purified by prep- HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(0.04%HCl)-ACN];B%: 5%- 30%,8min to 3-((3-(3-aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide hydrochloride (11 mg, 27. 9 µmol, 46.0% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.36 (s, 1H), 8.45 - 8.27 (m, 3H), 7.87 (d, J = 1.5 Hz, 1H), 7.65 - 7.53 (m, 2H), 7.38 - 7.27 (m, 2H), 7.03 (d, J = 7.5 Hz, 1H), 6.94 (d, J = 7.2 Hz, 1H), 4.14 - 4.01 (m, 1H), 3.99 - 3.90 (m, 4H), 3.47 - 3.40 (m, 2H), 2.62 - 2.55 (m, 2H), 1.91 - 1.83 (m, 2H), 1.72 - 1.58 (m, 2H), 1.18 (t, J = 7.5 Hz, 3H);LC-MS (ES+, m/z): 395.1 [(M+H)+]; Rt=2.005 min, 100% purity;HRMS:395.2158. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Synthesis of Intermediate III 3-((3-(4-Aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
Step 1: tert-Butyl (4-(3-nitrophenyl)but-3-yn-1-yl)carbamate
[00609] To a solution of 1-iodo-3-nitrobenzene (1.5 g, 6.02 mmol, 1 eq) and tert-butyl but-3-yn-1- ylcarbamate (1.02 g, 6.02 mmol, 1 eq) in TEA (2.73 g, 26.94 mmol, 3.75 mL, 4.47 eq) and THF (15 mL) was added CuI (45.89 mg, 240.96 µmol, 0.04 eq) and Pd(PPh3)2Cl2(84.56 mg, 120.48 µmol, 0.02 eq). The mixture was stirred at 20 °C for 6 h under N2. TLC showed the reaction was completed. The residue was poured into saturated aq.EDTA (100 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (100 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=30/1, 0/1) (TLC checked) to afford tert-butyl (4-(3-nitrophenyl)but-3-yn-1- yl)carbamate (1.7 g, 5.86 mmol, 97.21% yield, N/A purity) as light yellow oil. LC-MS (ES+, m/z): no found [(M+H)+]; Rt=no found min. Step 2: tert-Butyl (4-(3-aminophenyl)but-3-yn-1-yl)carbamate
[00610] To a solution of tert-butyl (4-(3-nitrophenyl)but-3-yn-1-yl)carbamate (1.7 g, 5.86 mmol, 1 eq) and NH4Cl (1.57 g, 73.25 mmol, 5 eq) in EtOH (20 mL) and H2O (10 mL) was added Fe (981.04 mg, 17.57 mmol, 3 eq) in portions at 80 °C. The mixture was stirred at 85 °C for 3 hr. TLC showed the reaction was completed. The mixture was filtered and concentrated. The residue was poured into H2O (150 mL). The aqueous phase was extracted with ethyl acetate (150 mL*3). The combined organic phase was washed with saturated brine (150 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by silica gel column (PE/EA = 10/1 to 0/1). To afford tert-butyl (4-(3-aminophenyl)but-3-yn-1-yl)carbamate (1.2 g, 4.61 mmol, 78.72% yield, N/A purity) as yellow oil. LC-MS (ES+, m/z): no found [(M+H)+]; Rt= no found. Step 3:tert-Butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenyl)but-3-yn-1-yl)carbamate
[00611] To a solution of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (0.3 g, 1.05 mmol, 1 eq) and tert-butyl (4-(3-aminophenyl)but-3-yn-1-yl)carbamate (411.42 mg, 1.58 mmol, 1.5 eq) in t-AmylOH (5 mL) was added dicyclohexyl-[2-(2,4,6- triisopropylphenyl)phenyl]phosphane (50.23 mg, 105.36 µmol, 0.1 eq) [2-(2- aminophenyl)phenyl]palladium(1+);dicyclohexyl-[2-(2,4,6- triisopropylphenyl)phenyl]phosphane;methanesulfonate (89.18 mg, 105.36 µmol, 0.1 eq) Cs2CO3 (686.56 mg, 2.11 mmol, 2 eq). The mixture was stirred at 130 °C for 6 h under microwave. LCMS showed the reaction was completed. The residue was poured into saturated aq.EDTA(100 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (100 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=5/1, 0/1). To afford tert-butyl (4-(3-((3- carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)phenyl)but-3-yn-1- yl)carbamate (0.47 g, 924.09 µmol, 43.85% yield, N/A purity) as yellow solid. LC-MS (ES+, m/z): 509.4 [(M+H)+]; Rt=0.876 min. Step 4:3-((3-(4-Aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00612] To a solution of tert-butyl (4-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)but-3-yn-1-yl)carbamate (80 mg, 157.29 µmol, 1 eq) in HCl/MeOH (4M, 5 mL, 127.15 eq) was stirred at 25 °C for 1 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give residue. The residue was added water (20 ml), then added NaHCO3 until the reaction was neutral, extracted with EA(30*3mL). The organic phase was separated, washed with saturated brine(15 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give crude product. The residue was purified by prep-HPLC (HCl condition:column: Phenomenex Luna 80*30mm*3um;mobile phase:
[water(HCl)-ACN];B%: 5%-55%,8min) to afford 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide(30 mg, 72.93 µmol, 46.36% yield, 99.3% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.42 - 11.28 (m, 1H), 8.24 - 8.08 (m, 1H), 8.06 - 8.01 (m, 1H), 7.70 - 7.50 (m, 1H), 7.44 - 7.34 (m, 1H), 7.34 - 7.22 (m, 1H), 7.08 - 6.92 (m, 1H), 4.20 - 4.09 (m, 1H), 4.02 - 3.88 (m, 2H), 3.09 - 2.96 (m, 2H), 2.88 - 2.74 (m, 2H), 1.96 - 1.84 (m, 2H), 1.74 - 1.57 (m, 2H), 1.31 - 1.09 (m, 3H)1H NMR (400 MHz, DMSO-d6) δ = 8.04 (s, 1H), 7.39 - 7.25 (m, 2H), 7.05 (d, J = 7.5 Hz, 1H), 4.17 - 4.05 (m, 1H), 3.96 (br dd, J = 3.4, 11.1 Hz, 2H), 3.52 - 3.44 (m, 2H), 3.03 (t, J = 7.2 Hz, 2H), 2.77 (t, J = 7.2 Hz, 2H), 2.62 - 2.52 (m, 3H), 1.94 - 1.80 (m, 2H), 1.66 (dq, J = 4.3, 12.1 Hz, 2H), 1.19 (t, J = 7.5 Hz, 3H);LC-MS (ES+, m/z): 409.1 [(M+H)+]; Rt=2.002 min, 99.26% purity; HRMS:409.2322. HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. [00613] The following compounds were prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 3-((3-(3-acetamidoprop-1-yn-1- yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (Intermediate III): Compound 9 3-((3-(3-Acrylamidoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
[00614] 1H NMR (400 MHz, DMSO-d6) δ = 11.34 (s, 2H), 8.65 - 8.60 (m, 1H), 8.05 (s, 2H), 7.59 (s, 1H), 7.36 - 7.25 (m, 5H), 7.01 (d, J = 7.2 Hz, 2H), 6.95 - 6.91 (m, 1H), 6.29 (s, 1H), 6.16 (d, J = 2.2 Hz, 1H), 6.12 (d, J = 2.2 Hz, 1H), 5.66 (d, J = 2.2 Hz, 1H), 4.23 - 4.19 (m, 4H), 4.17 - 4.08 (m, 2H), 3.94 (br dd, J = 3.4, 11.1 Hz, 4H), 3.49 (t, J = 11.2 Hz, 4H), 2.64 - 2.57 (m, 4H), 1.92 - 1.84 (m, 5H), 1.71 - 1.60 (m, 5H), 1.20 (t, J = 7.3 Hz, 7H); MW 448.52; Rt= 2.500 min, 99.38% purity; HRMS 449.2316 Compound 10 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((3-(3-(vinylsulfonamido)prop-1-yn-1- yl)phenyl)amino)pyrazine-2-carboxamide
[00615] 1H NMR (400 MHz, DMSO-d6) δ = 11.35 - 11.30 (m, 1H), 7.97 (s, 1H), 7.62 - 7.55 (m, 1H), 7.40 (dd, J = 1.2, 8.2 Hz, 1H), 7.35 - 7.26 (m, 2H), 7.00 (d, J = 7.7 Hz, 1H), 6.93 (d, J = 7.5 Hz, 1H), 7.04
- 6.73 (m, 1H), 6.15 - 5.97 (m, 2H), 4.28 (t, J = 6.9 Hz, 1H), 4.16 - 4.06 (m, 1H), 3.99 - 3.91 (m, 4H), 3.43 - 3.43 (m, 1H), 3.47 (br t, J = 11.2 Hz, 2H), 2.64 - 2.56 (m, 3H), 1.91 - 1.82 (m, 2H), 1.71 - 1.59 (m, 3H), 1.25 - 1.13 (m, 4H); MW 484.57; Rt= 2.500 min, 99.38% purity; HRMS 485.1996. Example 6 (Compound 13) 6-Ethyl-3-((3-(3-propiolamidoprop-1-yn-1-yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-3-((3-(3-propiolamidoprop-1-yn-1-yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00616] To a solution of 3-((3-(3-aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (60 mg, 152.10 µmol, 1 eq) prop-2-ynoic acid (15.98 mg, 228.15 µmol, 14.02 µL, 1.5 eq) in DMF (0.5 mL) ,PYBROP (106.36 mg, 228.15 µmol, 1.5 eq) DIPEA (196.58 mg, 1.52 mmol, 264.93 µL, 10 eq) was added. The mixture was stirred at 25°C for 10h. LCMS showed the reaction was completed. The mixture was concentrated, diluted with saturated NaHCO3 (300 ml) and extracted with EtOAc(300 ml*2). The combined organic layers was washed with H2O (100 ml*2),saturated brine (100 ml*2), filtered, dried over Na2SO4, concentrated. The residue was purified by prep-HPLC (TFA condition) to afford 6-ethyl-3-((3-(3-propiolamidoprop-1-yn-1-yl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (20 mg, 44.79 µmol, 29.45% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.33 (s, 1H), 9.28 (t, J = 5.3 Hz, 1H), 8.02 (s, 1H), 7.60 (br d, J = 2.7 Hz, 1H), 7.37 - 7.25 (m, 3H), 7.00 (d, J = 7.5 Hz, 1H), 6.93 (d, J = 7.6 Hz, 1H), 4.23 - 4.21 (m, 1H), 4.16 - 4.06 (m, 3H), 3.95 (br dd, J = 3.1, 11.3 Hz, 2H), 3.52 - 3.43 (m, 2H), 3.30 (s, 1H), 2.60 (q, J = 7.4 Hz, 2H), 1.87 (br dd, J = 2.2, 12.6 Hz, 2H), 1.65 (dq, J = 4.3, 12.1 Hz, 3H), 1.20 (t, J = 7.4 Hz, 4H). LC-MS (ES+, m/z): 447.0 [(M+H)+]; Rt=2.473 min, 96.10%; HRMS: 447.2129.
Example 7 (Compound 14) 3-((3-(3-(But-2-ynamido)prop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(3-(But-2-ynamido)prop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00617] A mixture of 3-((3-(3-aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (100 mg, 232.06 µmol, 1 eq, HCl) but-2-ynoic acid (25.36 mg, 301.67 µmol, 1.3 eq),HATU (105.88 mg, 278.47 µmol, 1.2 eq),TEA (117.41 mg, 1.16 mmol, 161.50 µL, 5 eq) and DCM (5 mL) was stirred at 25°C for 10 h. LCMS showed the reaction was completed. The reaction was poured into water (5 ml) and extracted with EtOAc(5 ml*2). The organic layers were combined, washed with water (5 ml*2), saturated brine (5 ml), dried Na2SO4, filtered and concentrated to give crude product. The crude was purified by prep-HPLC(column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 45%-85%,8min) to afford 3-((3-(3-(but-2-ynamido)prop-1-yn-1- yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide(11.1 mg, 24.01 µmol, 10.35% yield, 99.62% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.33 (s, 1H), 9.01 (t, J = 5.4 Hz, 1H), 8.01 (s, 1H), 7.60 (br s, 1H), 7.43 - 7.31 (m, 1H), 7.41 - 7.20 (m, 1H), 7.31 - 7.19 (m, 1H), 7.00 (d, J = 7.5 Hz, 1H), 6.93 (br d, J = 7.5 Hz, 1H), 4.17 - 4.08 (m, 3H), 3.95 (br dd, J = 3.5, 11.0 Hz, 2H), 3.50 - 3.46 (m, 2H), 2.61 (q, J = 7.4 Hz, 2H), 1.97 (s, 3H), 1.88 (br dd, J = 2.4, 12.5 Hz, 2H), 1.74 - 1.60 (m, 2H), 1.21 (t, J = 7.3 Hz, 3H);LC-MS (ES+, m/z): 461.1 [(M+H)+]; Rt=2.512 min, 99.63%; HRMS:461.2281.
Example 8 (Compound 11) 3-((3-(4-Acrylamidobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(4-Acrylamidobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide
[00618] To a solution of 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (30 mg, 66.10 µmol, 90% purity, 1 eq) in DCM (1 mL) was added TEA (33.44 mg, 330.48 µmol, 46.00 µL, 5 eq) and prop-2-enoyl chloride (7.78 mg, 85.93 µmol, 7.01 µL, 1.3 eq). The mixture was stirred at 25 °C for 1 h. LCMS showed there was the desired MS. The reaction mixture was quenched by addition H2O 1 ml. The crude was purified by prep-HPLC(column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 25%-55%,8min) to afford 3-((3-(4-acrylamidobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (10.3 mg, 22.27 µmol, 33.69% yield, 100% purity) as white solid. 1H NMR (400 MHz, METHANOL-d4) δ = 10.87 (s, 1H), 8.15 - 8.09 (m, 1H), 7.30 - 7.16 (m, 2H), 7.01 (td, J = 1.3, 7.3 Hz, 1H), 6.33 - 6.17 (m, 2H), 5.71 - 5.62 (m, 1H), 4.34 - 4.23 (m, 1H), 4.08 - 3.98 (m, 2H), 3.75 - 3.64 (m, 2H), 3.53 - 3.46 (m, 2H), 2.77 - 2.52 (m, 4H), 2.07 - 1.94 (m, 2H), 1.77 - 1.63 (m, 2H), 1.33 - 1.24 (m, 3H); LC-MS (ES+, m/z): 463.1 [(M+H)+]; Rt=2.492 min, 100% purity; HRMS: 463.2430. [00619] The following compound was prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 3-((3-(4-acrylamidobut-1-yn-1- yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (Compound 10):
Compound 12 6-ethyl-5-((Tetrahydro-2H-pyran-4-yl)amino)-3-((3-(4-(vinylsulfonamido)but-1-yn-1- yl)phenyl)amino)pyrazine-2-carboxamide
[00620] 1HNMR: 1H NMR (400 MHz, METHANOL-d4) δ = 10.89 (s, 1H), 8.24 - 8.10 (m, 1H), 7.31 - 7.16 (m, 2H), 7.02 (td, J = 1.7, 6.7 Hz, 1H), 6.73 - 6.64 (m, 1H), 6.25 - 6.15 (m, 1H), 6.05 - 5.90 (m, 1H), 4.43 - 4.22 (m, 1H), 4.10 - 3.96 (m, 2H), 3.69 (t, J = 11.6 Hz, 2H), 3.20 (t, J = 7.2 Hz, 2H), 2.73 - 2.55 (m, 4H), 2.07 - 1.97 (m, 2H), 1.78 - 1.63 (m, 2H), 1.28 (t, J = 7.4 Hz, 3H); MW 499.1; Rt= 2.598 min, 100% purity; HRMS 499.2081. Example 9 (Compound 15) 6-Ethyl-3-((3-(4-propiolamidobut-1-yn-1-yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-3-((3-(4-propiolamidobut-1-yn-1-yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00621] To a solution of 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (60 mg, 146.88 µmol, 1 eq) prop-2-ynoic acid (15.43 mg, 220.32 µmol, 13.54 µL, 1.5 eq) in DMF (2 mL), DIPEA (189.83 mg, 1.47 mmol, 255.83 µL, 10 eq) PYBROP (102.71 mg, 220.32 µmol, 1.5 eq) was added. The mixture was stirred at 25 °C for 2 h. LCMS showed there was the desired MS. The reaction mixture was quenched by addition H2O 1 ml. The crude product was purified by prep-HPLC(column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 35%-65%,8min) to afford 6-ethyl-3-((3-(4-propiolamidobut-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (10 mg, 20.75 µmol, 14.13% yield, 95.55% purity) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.32 (s, 1H), 8.97 (t, J
= 5.7 Hz, 1H), 8.05 (s, 1H), 7.72 - 7.48 (m, 1H), 7.39 - 7.14 (m, 3H), 7.05 - 6.82 (m, 2H), 4.16 - 4.14 (m, 1H), 3.99 - 3.89 (m, 2H), 3.57 - 3.43 (m, 2H), 3.31 - 3.24 (m, 3H), 2.63 - 2.55 (m, 4H), 1.87 (br dd, J = 1.8, 12.3 Hz, 2H), 1.72 - 1.58 (m, 2H), 1.23 - 1.16 (m, 3H);LC-MS (ES+, m/z): 461.1 [(M+H)+];Rt=2.508 min, 95.55% purity; HRMS:461.2281. Example 10 (Compound 16) 3-((3-(4-(But-2-ynamido)but-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(4-(But-2-ynamido)but-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00622] To a solution of 3-((3-(4-aminobut-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (31.07 mg, 68.45 µmol, 90% purity, 1 eq) but-2-ynoic acid (7.48 mg, 88.98 µmol, 1.3 eq) and 1-methylimidazole (19.67 mg, 239.56 µmol, 19.10 µL, 3.5 eq) in ACN (1 mL) was added [chloro(dimethylamino)methylene]-dimethyl-ammonium;hexafluorophosphate (19.20 mg, 68.45 µmol, 1 eq) all at ones. Reaction was allowed to stir at 25 °C for 1 h. LCMS showed there was the desired MS. The reaction mixture was quenched by addition H2O 1 ml. The crude was purified by prep- HPLC(column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 42%- 72%,8min) to afford 3-((3-(4-(but-2-ynamido)but-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (4.7 mg, 7.99 µmol, 1 eq, TFA) as yellow solid. LC-MS (ES+, m/z): 475.1 [(M+H)+]; Rt=2.547 min, 100% purity; HRMS:475.2455.
General Synthetic Scheme IV
wherein R4 is as described herein Example 11 (Compound 17) (S)-6-Ethyl-3-((3-(3-(2-(N-methylacrylamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S)-tert-Butyl (1-((3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)amino)-1-oxopropan-2- yl)(methyl)carbamate
[00623] A mixture of 3-((3-(3-aminoprop-1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (200 mg, 464.11 µmol, 1 eq, HCl), (S)-2-((tert- butoxycarbonyl)(methyl)amino)propanoic acid (141.49 mg, 696.17 µmol, 1.71 µL, 1.5 eq), DIPEA (299.92 mg, 2.32 mmol, 404.20 µL, 5 eq) ,HATU (211.76 mg, 556.93 µmol, 1.2 eq) and DMF (10 mL) was stirred at 25 °C for 10 h. LCMS indicated the reaction was complete. The reaction was poured into water (50 ml) and extracted with EtOAc(30 ml*2). The organic layers were combined, washed with water (10 ml*2), saturated brine (10 ml), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by prep-HPLC(column: Waters Xbridge BEH C18100*30mm*10um;mobile
phase: [water( NH4HCO3)-ACN];B%: 35%-60%,8 min) to afford (S)-tert-butyl (1-((3-(3-((3-carbamoyl-5- ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)amino)-1- oxopropan-2-yl)(methyl)carbamate (250 mg, 431.27 µmol, 92.92% yield, 100% purity) as white solid.1H NMR (400 MHz, CHLOROFORM-d) δ = 10.94 (s, 1H), 8.07 (t, J = 1.7 Hz, 1H), 7.54 (br d, J = 2.5 Hz, 1H), 7.47 - 7.37 (m, 1H), 7.23 (t, J = 7.9 Hz, 1H), 7.07 (d, J = 7.6 Hz, 1H), 5.20 (br s, 1H), 4.68 (br d, J = 7.4 Hz, 1H), 4.37 - 4.14 (m, 3H), 4.11 - 3.98 (m, 2H), 3.73 - 3.61 (m, 2H), 2.89 - 2.77 (m, 3H), 2.55 (q, J = 7.3 Hz, 2H), 2.13 (td, J = 2.1, 12.3 Hz, 2H), 1.66 - 1.59 (m, 2H), 1.55 (br d, J = 4.4 Hz, 2H), 1.49 (s, 8H), 1.39 (br d, J = 7.2 Hz, 3H), 1.31 - 1.30 (m, 1H), 1.33 (t, J = 7.3 Hz, 2H); LC-MS (ES+, m/z): 480.2 [(M+H)+]; Rt=2.789 min, 100% purity; HRMS: 480.2690. Step 2: (S)-6-Ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1-yl)phenyl)amino)- 5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00624] A mixture of (S)-tert-butyl (1-((3-(3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenyl)prop-2-yn-1-yl)amino)-1-oxopropan-2-yl)(methyl)carbamate (180 mg, 310.51 µmol, 1 eq) in HCl/EtOAc (4 M, 77.63 µL, 1 eq) was stirred at 25 °C for 1 h. LCMS indicated the reaction was completed. The mixture was concentrated to give crude product. The crude product was purified by prep-HPLC(column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(HCl)- ACN];B%: 20%-50%,8min) to afford (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (120 mg, 241.31 µmol, 77.72% yield, 96.44% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.36 (s, 1H), 9.13 - 8.99 (m, 2H), 8.86 (br dd, J = 5.0, 9.9 Hz, 1H), 8.03 (s, 1H), 7.61 (br s, 1H), 7.42 - 7.27 (m, 3H), 7.07 - 6.89 (m, 2H), 4.33 - 4.08 (m, 3H), 3.97 (br d, J = 8.8 Hz, 2H), 3.87 - 3.72 (m, 2H), 3.54 - 3.47 (m, 2H), 2.61 (q, J = 7.4 Hz, 2H), 1.89 (br dd, J = 2.3, 12.5 Hz, 2H), 1.67 (dq, J = 4.4, 12.1 Hz, 2H), 1.41 (d, J = 6.9 Hz, 3H), 1.21 (t, J = 7.4 Hz, 3H);1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 7.64 (s, 1H), 7.03 - 6.92 (m, 1H), 6.87 - 6.67 (m, 2H), 4.16 - 4.05 (m, 2H), 3.87 (q, J = 7.1 Hz, 1H), 3.79 (br d, J = 10.5 Hz, 2H), 3.52 (tdd, J = 3.9, 7.5, 14.9 Hz, 1H), 3.34 (br t, J = 12.3 Hz, 2H), 2.66 - 2.62 (m, 3H), 2.22 (q, J = 7.3 Hz, 2H), 1.72 - 1.63 (m, 2H), 1.48 (d, J = 7.0 Hz, 3H), 1.31 (dq, J = 4.1, 12.0 Hz, 2H), 1.05 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 480.2 [(M+H)+]; Rt=2.789 min,100% purity; HRMS:480.2690. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M).
Step 3: (S)-6-Ethyl-3-((3-(3-(2-(N-methylacrylamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00625] To a solution of (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (60 mg, 116.27 µmol, 1 eq, HCl) TEA (117.65 mg, 1.16 mmol, 161.83 µL, 10 eq) in DCM (2 mL) at 0 °C, prop-2-enoyl chloride (12.63 mg, 139.53 µmol, 11.38 µL, 1.2 eq) was added. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was completed. The mixture was poured into H2O (5 mL) and extracted with DCM(3 mL*2). The organic layers was washed with water(3 mL*2), saturated brine(3 mL*2), dried over Na2SO4, filtered, concentrated to give crude product. The crude was purified by prep-HPLC (column: Phenomenex C1880*40mm*3um;mobile phase: [water( NH4HCO3)-ACN];B%: 30%-60%,8min) to afford (S)-6-ethyl-3-((3-(3-(2-(N-methylacrylamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (11.53 mg, 21.24 µmol, 18.27% yield, 98.32% purity) as white solid.1H NMR (400 MHz, CHLOROFORM-d) δ = 10.84 (s, 1H), 7.99 (s, 1H), 7.45 (br s, 1H), 7.30 (br d, J = 8.3 Hz, 1H), 7.19 (s, 4H), 7.13 (t, J = 7.9 Hz, 1H), 6.97 (d, J = 7.6 Hz, 1H), 6.63 - 6.45 (m, 2H), 6.38 - 6.27 (m, 1H), 5.71 (dd, J = 1.7, 10.4 Hz, 1H), 5.24 - 5.07 (m, 2H), 4.58 (br d, J = 7.3 Hz, 1H), 4.30 - 4.06 (m, 3H), 4.01 - 3.91 (m, 2H), 3.57 (ddt, J = 1.8, 5.8, 11.7 Hz, 2H), 2.93 (s, 3H), 2.46 (q, J = 7.3 Hz, 2H), 2.07 - 2.00 (m, 2H), 1.57 - 1.51 (m, 2H), 1.31 (d, J = 7.2 Hz, 3H), 1.24 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 534.2 [(M+H)+]; Rt=2.452 min, 98.32% purity; HRMS: 534.2830. Example 12 (Compound 18) (S,E)-3-((3-(3-(2-(4-(Dimethylamino)-N-methylbut-2-enamido)propanamido)prop-1-yn-1- yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(3-(2-(4-(Dimethylamino)-N-methylbut-2-enamido)propanamido)prop- 1-yn-1-yl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00626] To a solution of (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (60 mg, 116.27 µmol, 1 eq, HCl) HATU (66.31 mg, 174.41 µmol, 1.5 eq) DIPEA (178.08 mg, 1.38 mmol, 240.00 µL, 11.85 eq) in DMF (2 mL) at 0 °C, (E)-4-(dimethylamino)but-2-enoic acid (38.51 mg, 232.54 µmol, 11.38 µL, 2 eq, HCl) was added. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was completed. The mixture was poured into H2O (5 mL) and extracted with EtOAc(3 mL*2). The organic layers was washed with water (3 mL*2), saturated brine(3 mL*2), dried over Na2SO4, filtered, concentrated to give crude product. The crude product was purified by prep-HPLC(column: Phenomenex C18 80*40mm*3um;mobile phase: [water( NH4HCO3)-ACN];B%: 30%-60%,8min) to afford (S,E)-3-((3-(3- (2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (11.01 mg, 18.25 µmol, 15.70% yield, 97.91% purity) as brown solid.1H NMR (400 MHz, DMSO-d6) δ = 11.33 (s, 1H), 8.56 (br s, 1H), 8.34 (br t, J = 5.0 Hz, 1H), 8.02 (s, 1H), 7.60 (br d, J = 2.4 Hz, 1H), 7.43 - 7.23 (m, 3H), 7.04 - 6.82 (m, 2H), 6.72 - 6.46 (m, 2H), 5.15 - 4.56 (m, 1H), 4.20 - 4.03 (m, 3H), 4.00 - 3.86 (m, 2H), 3.56 - 3.43 (m, 2H), 3.04 (br d, J = 5.7 Hz, 1H), 2.87 (br s, 3H), 2.83 - 2.72 (m, 1H), 2.69 - 2.66 (m, 1H), 2.61 (d, J = 7.4 Hz, 2H), 2.25 - 2.00 (m, 5H), 1.93 - 1.83 (m, 1H), 1.93 - 1.82 (m, 1H), 1.66 (dq, J = 4.4, 11.9 Hz, 2H), 1.38 - 1.16 (m, 6H); LC-MS (ES+, m/z): 591.4 [(M+H)+]; Rt=2.678 min, 97.91% purity; HRMS:591.3401. Example 13 (Compound 19) (S)-6-Ethyl-3-((3-(3-(2-(N-methylvinylsulfonamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S)-6-Ethyl-3-((3-(3-(2-(N-methylvinylsulfonamido)propanamido)prop-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00627] To a solution of (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)prop-1-yn-1- yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 208.52 µmol, 1 eq) DIPEA (269.49 mg, 2.09 mmol, 363.19 µL, 10 eq) in DMF (2 mL) at 0 °C, 2-chloroethanesulfonyl chloride (110 mg, 674.75 µmol, 70.51 µL, 3.24 eq) was added. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was completed. The mixture was concentrated to give crude product. The crude product was purified by prep-HPLC(column: Phenomenex luna C18100*40mm*5 µm;mobile phase: [water(TFA)-ACN];B%: 25%-70%,8min) to afford (S)-6-ethyl-3-((3-(3-(2-(N- methylvinylsulfonamido)propanamido)prop-1-yn-1-yl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (16 mg, 28.09 µmol, 13.47% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, CHLOROFORM-d) δ = 10.63 (s, 1H), 8.09 (s, 1H), 7.68 (br s, 1H), 7.45 - 7.38 (m, 1H), 7.27 (br t, J = 7.9 Hz, 1H), 7.13 (d, J = 7.5 Hz, 1H), 6.74 (br s, 1H), 6.59 - 6.45 (m, 1H), 6.33 (d, J = 16.5 Hz, 1H), 6.23 (br s, 1H), 6.08 (d, J = 9.9 Hz, 1H), 4.89 - 4.70 (m, 1H), 4.54 (q, J = 7.1 Hz, 1H), 4.43 - 4.20 (m, 3H), 4.15 - 4.02 (m, 2H), 3.69 (ddd, J = 3.0, 9.3, 11.9 Hz, 2H), 2.83 (s, 3H), 2.60 - 2.56 (m, 2H), 2.20 - 2.09 (m, 2H), 1.63 (dq, J = 4.4, 11.8 Hz, 2H), 1.51 - 1.40 (m, 3H), 1.39 - 1.31 (m, 3H);LC-MS (ES+, m/z): 570.2 [(M+H)+]; Rt=2.594 min, 100% purity; HRMS:570.2520. General Synthetic Scheme V
wherein R4 is as described herein and n is an integer between 1 and 3.
Synthesis of Intermediate IV 6-Ethyl-3-((2-fluoropyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
Step 1: 6-Ethyl-3-((2-fluoropyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamid
[00628] To a mixture of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (500 mg, 1.76 mmol, 1 eq), 2-fluoropyridin-4-amine (393.71 mg, 3.51 mmol, 235.91 µL, 2 eq), Cs2CO3 (2.57 g, 7.90 mmol, 4.5 eq) in dioxane (20 mL), Xantphos (Pd G4) (337.98 mg, 351.20 µmol, 0.2 eq) Xantphos (203.21 mg, 351.20 µmol,0.2 eq) was added. The mixture was stirred at 110 °C for 12 h under N2. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (30 mL) and extracted with EtOAc (30 mL*2). The combined organic layers was washed with H2O (10 mL*2), saturated brine (10 mL*2), filtered, dried over Na2SO4, concentrated, and then purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1to 1/1) to give 6-ethyl-3-((2- fluoropyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (300 mg, 832.44 µmol, 47.41% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.87 (s, 1H), 7.98 (d, J = 5.7 Hz, 1H), 7.73 (br d, J = 1.5 Hz, 2H), 7.53 (br s, 1H), 7.23 - 7.10 (m, 2H), 4.10 – 3.96 (m, 3H), 3.48 - 3.39 (m, 2H), 2.65 -2.59 (m, 2H), 1.91 (br dd, J = 2.0, 12.5 Hz, 2H), 1.68 (dq, J = 4.4, 12.1 Hz, 2H), 1.21 (t, J = 7.3 Hz, 3H). LC-MS (ES+, m/z): 361.1 [(M+H)+]. Rt=2.369 min, 99.24% purity. HRMS (EI): m/z [M]+ found: 361.1785
Synthesis of Intermediate II 3-((2-Chloropyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
Step 1: 3-((2-Chloropyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00629] To a mixture of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (500 mg, 1.76 mmol, 1 eq), 2-chloropyridin-4-amine (361.20 mg, 2.81 mmol, 235.91 µL, 1.6 eq) in dioxane (20 mL), Cs2CO3 (2.57 g, 7.90 mmol, 4.5 eq), Xantphos (Pd G4) (302.19 mg, 351.20 µmol, 0.2 eq), Xantphos (203.21 mg, 351.20 µmol, 0.2 eq) was added. The mixture was stirred at 100 °C for 12 h under N2. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (30 mL) and extracted with EtOAc (30 mL*2). The combined organic layers was washed with H2O (10 mL*2), saturated brine (10 mL*2), filtered, dried over Na2SO4, concentrated. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1to 1/1) to give 3-((2-chloropyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (170 mg, 451.12 µmol, 25.69% yield) as Yellow solid. 1H NMR (400 MHz, MeOD-d4) δ = 8.58 (d, J = 2.0 Hz, 1H), 8.29 (d, J = 6.8 Hz, 1H), 7.63 (dd,J = 2.1, 6.7 Hz, 1H), 4.21 (tt, J = 4.2, 11.2 Hz, 1H), 4.07 (br dd, J = 3.6, 11.3 Hz, 2H), 3.65 (dt, J = 1.8, 11.9 Hz, 2H), 2.71 (q, J = 7.3 Hz, 2H), 2.04 (br dd, J = 2.2, 12.7 Hz, 2H), 1.79 (dq, J = 4.5, 12.2 Hz, 2H), 1.32 (t, J = 7.5 Hz, 3H); LC-MS (ES+, m/z): 377.1 [(M+H)+]. Rt=2.672 min, 97.66% purity. HRMS (EI): m/z [M]+ found: 377.1468
Example 14 (Compound 20) 3-((2-((2-Acrylamidoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((2-((2-Aminoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00630] A mixture of 6-ethyl-3-((2-fluoropyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (600 mg, 1.66 mmol, 1 eq), ethane-1,2-diamine (23.94 g, 398.35 mmol, 26.66 mL, 239.27 eq) was stirred at 150 °C for 3 h in 100 mL of autoclave under 1 MPa. The reaction was concentrated to give 3-((2-((2-aminoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino) pyrazine-2-carboxamide (350 mg, crude) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 13.24 - 12.94 (m, 1H), 12.34 - 11.98 (m, 1H), 8.28 - 8.03 (m, 3H), 8.01 - 7.93 (m, 1H), 7.91 - 7.82 (m, 1H), 7.75 - 7.66 (m, 1H), 7.63 - 7.49 (m, 1H), 7.19 (br d, J = 7.0 Hz, 1H), 7.05 - 6.88 (m, 1H), 4.23 - 4.10 (m, 1H), 3.97 (br d, J = 10.3 Hz, 2H), 3.76 - 3.63 (m, 2H), 3.60 - 3.50 (m, 2H), 3.12 (br d, J = 3.8 Hz, 2H), 2.73 - 2.69 (m, 2H), 1.95 (br d, J = 10.4 Hz, 2H), 1.78 - 1.67 (m, 2H), 1.29 (t, J = 7.3 Hz, 3H) (HCl salt). LC-MS (ES+, m/z): 401.1 [(M+H)+]. Rt=1.631 min, 100% purity. HRMS (EI): m/z [M]+ found: 401.2417 Step 2: 3-((2-((2-Acrylamidoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00631] To a solution of 3-((2-((2-aminoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (80 mg, 199.76 µmol, 1 eq) acrylic acid (28.79 mg, 399.52 µmol, 27.42 µL, 2 eq) in DMF (2 mL), PYBROP (186.25 mg, 399.52 µmol, 2 eq) DIPEA (258.18 mg,
2.00 mmol, 347.95 µL, 10 eq) was added. The mixture was stirred at 25 °C for 4 h under N2. LCMS indicated the reaction was complete. The mixture was concentrated, diluted with saturated NaHCO3 (10 mL) and extracted with EtOAc (10 mL*2). The combined organic layers was washed with H2O (5 mL *2), saturated brine (5 mL *2), filtered, dried over Na2SO4, concentrated, and then purified by prep-HPLC (column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 20%-40%,8min) to give 3-((2-((2-acrylamidoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (20 mg, 44.00 µmol, 22.03% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.30 (s, 1H), 8.28 - 8.21 (m, 1H), 7.82 (d, J = 5.7 Hz, 1H), 7.63 (br d, J = 2.5 Hz, 1H), 7.38 (br d, J = 2.4 Hz, 1H), 7.00 (dd, J = 1.4, 5.8 Hz, 1H), 6.91 (d, J = 7.3 Hz, 1H), 6.54 (d, J = 1.2 Hz, 1H), 6.30 (t, J = 5.2 Hz, 1H), 6.26 - 6.15 (m, 1H), 6.13 - 6.04 (m, 1H), 5.58 (dd, J = 2.3, 10.0 Hz, 1H), 4.17 - 4.05 (m, 1H), 3.93 (br d, J = 9.5 Hz, 2H), 3.50 - 3.42 (m, 2H), 3.32 - 3.25 (m, 4H), 2.61 (q, J = 7.4 Hz, 2H), 1.90 (br dd, J = 2.0, 12.3 Hz, 2H), 1.72 - 1.62 (m, 2H), 1.20 (t, J = 7.3 Hz, 3H); 1H NMR (400 MHz, CDCl3) δ = 11.27 (s, 1H), 7.87 (d, J = 6.0 Hz, 1H), 7.59 (br d, J = 3.1 Hz, 1H), 7.41 (br s, 1H), 7.02 (dd, J = 1.6, 6.0 Hz, 1H), 6.90 (s, 1H), 6.30 - 6.22 (m, 1H), 6.17 - 6.06 (m, 1H), 5.62 (dd, J = 1.4, 10.2 Hz, 1H), 5.44 (br s, 1H), 5.31 (br d, J = 2.9 Hz, 1H), 4.85 (br d, J = 7.1 Hz, 1H), 4.22 - 4.04 (m, 3H), 3.76 - 3.54 (m, 6H), 2.58 (q, J = 7.3 Hz, 2H), 2.18 - 2.08 (m, 2H), 1.89 - 1.82 (m, 2H), 1.39 - 1.30 (m, 3H) LC-MS (ES+, m/z): 455.1 [(M+H)+]. Rt=1.887 min, 97.31 % purity. HRMS (EI): m/z [M]+ found: 455.2538 [00632] The following compounds were prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 3-((2-((2- acrylamidoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (Compound 20): Compound 21 6-Ethyl-3-((2-((2-propiolamidoethyl)amino)pyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00633] 1H NMR (400 MHz, DMSO-d6) δ = 11.30 (s, 1H), 8.81 (t, J = 5.4 Hz, 1H), 8.22 (s, 1H), 7.81 (d, J = 5.8 Hz, 1H), 7.63 (br d, J = 2.7 Hz, 1H), 7.38 (br d, J = 2.6 Hz, 1H), 7.01 (dd, J = 1.7, 5.8 Hz, 1H), 6.92 (br d, J = 7.4 Hz, 1H), 6.53 (d, J = 1.5 Hz, 1H), 6.30 (t, J = 5.6 Hz, 1H), 4.18 - 4.04 (m, 2H), 3.96 - 3.89 (m, 2H), 3.51 - 3.45 (m, 2H), 3.28 - 3.16 (m, 4H), 2.65 - 2.59 (m, 2H), 1.90 (br dd, J = 2.2, 12.6 Hz, 2H), 1.71 - 1.61 (m, 2H), 1.24 - 1.16 (m, 3H)(FA, salt); MW 452.51; LCMS 453.1 [(M+H)+]; Rt= 1.857 min, 98.18% purity; HRMS 453.2390.
Compound 22 3-((2-((2-(But-2-ynamido)ethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00634] 1H NMR (400 MHz, DMSO-d6) δ = 12.47 (br s, 1H), 12.12 (s, 1H), 8.61 (br t, J = 5.6 Hz, 1H), 7.93 - 7.75 (m, 3H), 7.63 (br s, 1H), 7.30 (br d, J = 6.5 Hz, 1H), 7.12 (br d, J = 7.3 Hz, 1H), 7.05 - 6.95 (m, 1H), 4.09 (br dd, J = 4.0, 11.0 Hz, 2H), 3.96 - 3.85 (m, 2H), 3.69 (br d, J = 14.7 Hz, 6H), 2.66 (br d, J = 7.5 Hz, 2H), 1.93 (s, 2H), 1.90 - 1.84 (m, 2H), 1.73 - 1.62 (m, 2H), 1.22 (t, J = 7.3 Hz, 3H)(TFA salt). 1H NMR (400 MHz, MeOD-d4) δ = 7.72 (d, J = 7.3 Hz, 1H), 7.32 - 7.23 (m, 2H), 4.22 - 4.11 (m, 1H), 4.05 (br d, J = 11.4 Hz, 2H), 3.66 - 3.54 (m, 2H), 3.52 - 3.33 (m, 4H), 2.70 (q, J = 7.4 Hz, 2H), 2.04 - 1.97 (m, 2H), 1.96 - 1.93 (m, 3H), 1.93 - 1.84 (m, 2H), 1.31 (t, J = 7.3 Hz, 3H); MW 466.54; LCMS 467.1 [(M+H)+]; Rt= 1.890 min, 100% purity; HRMS 467.2503. Example 15 (Compound 23) 6-Ehyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((2-(vinylsulfonamido)ethyl)amino)pyridin-4- yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((2- (vinylsulfonamido)ethyl)amino)pyridin-4-yl)amino)pyrazine-2-carboxamide
[00635] To a solution of 3-((2-((2-aminoethyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (90 mg, 224.73 µmol, 1 eq) DIPEA (290.45 mg, 2.25 mmol, 391.44 µL, 10 eq) in DMF (2 mL) at 0 °C, 2-chloroethanesulfonyl chloride (91.59 mg, 561.83 µmol, 58.71 µL, 2.5 eq) was added. The mixture was allowed to warm to 25 °C for 2 h. LCMS indicated the reaction was complete. The mixture was concentrated to dryness. The crude was purified by prep-HPLC (column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%:
15%-45%,8min) to 6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((2 (vinylsulfonamido)ethyl)amino) pyridin-4-yl)amino)pyrazine-2-carboxamide(100% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 12.47 (br s, 1H), 12.23 - 12.09 (m, 1H), 7.97 - 7.79 (m, 3H), 7.66 (br d, J = 1.8 Hz, 1H), 7.53 (t, J = 5.9 Hz, 1H), 7.41 (br d, J = 5.8 Hz, 1H), 7.15 (br d, J = 7.4 Hz, 1H), 6.97 (br s, 1H), 6.75 (dd, J = 9.9, 16.6 Hz, 1H), 6.11 - 5.97 (m, 2H), 4.14 - 4.07 (m, 1H), 3.93 (br d, J = 9.9 Hz, 2H), 3.52 - 3.46 (m, 4H), 3.07 (q, J = 6.0 Hz, 2H), 2.68 - 2.64 (m, 2H), 1.95 - 1.84 (m, 2H), 1.79 - 1.63 (m, 2H), 1.24 (t, J = 7.3 Hz, 3H) (TFA, salt). LC-MS (ES+, m/z): 491.1 [(M+H)+]. Rt=1.907 min, 99.31 % purity. HRMS (EI): m/z [M]+ found: 491.2216 Example 16 (Compound 24) 3-((2-((3-Acrylamidopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: 3-((2-((3-Aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00636] A mixture of 6-ethyl-3-((2-fluoropyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (600 mg, 1.66mmol, 1 eq), propane-1,3-diamine (21.31 g, 287.52 mmol, 24.00 mL, 172.69 eq) was stirred at 150 °C for 10 h. LCMS indicated the reaction was complete. The reaction was concentrated to give 3-((2-((3-aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (700 mg, crude) as yellow solid. LC-MS (ES+, m/z): 415.1 [(M+H)+]. Rt=0.250 min. Step 2: tert-Butyl (3-((4-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)pyridin-2-yl)amino)propyl)carbamate
[00637] A mixture of 3-((2-((3-aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (700 mg, 1.69 mmol, 1 eq) Boc2O (1.84 g, 8.44 mmol, 1.94 mL, 5 eq) TEA (1.71 g, 16.89 mmol, 2.35 mL, 10 eq) and DCM (30 mL) was stirred at 25 °C for 10 h. LCMS indicated the reaction was complete. The reaction was poured into water (50 mL) and extracted with EtOAc (30 mL*2). The organic layers were combined, washed with water (10 mL*2), saturated brine (10 mL), dried (Na2SO4), filtered, concentrated, and then purified by chromatography on silica gel (DCM/MeOH=10:1) to give tert-butyl (3-((4-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)pyridin-2-yl)amino)propyl) carbamate (350 mg, 653.93 µmol, 38.72% yield, 96.15% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 7.80 (d, J = 5.8 Hz, 1H), 7.62 (br d, J = 2.6 Hz, 1H), 7.37 (br s, 1H), 6.96 (dd,J = 1.6, 5.8 Hz, 1H), 6.91 (br d, J = 7.4 Hz, 1H), 6.88 - 6.80 (m, 1H), 6.52 (d, J = 1.1 Hz, 1H), 6.14 (br t, J = 5.6 Hz, 1H), 4.18 -4.07 (m, 1H), 3.93 (br dd, J = 2.0, 11.3 Hz, 2H), 3.52 - 3.41 (m, 2H), 3.21 (q, J = 6.6 Hz, 2H), 2.98 (q, J = 6.6 Hz, 2H), 2.63 -2.58 (m, 2H), 1.90 (br dd, J = 2.0, 12.4 Hz, 2H), 1.72 - 1.57 (m, 4H), 1.38 (s, 9H), 1.20 (t, J = 7.3 Hz, 3H). LC-MS (ES+, m/z): 515.2 [(M+H)+]. Rt=2.118 min, 96.15 % purity. HRMS (EI): m/z [M]+ found: 515.3129 Step 3: 3-((2-((3-Aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00638] A mixture of tert-butyl (3-((4-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)pyridin-2-yl)amino)propyl)carbamate (350 mg, 680.11 µmol, 1 eq) and HCl/MeOH (4 M, 116.67 mL, 686.16 eq) was stirred at 25 °C for 1 h. LCMS indicated the reaction was complete. The mixture was concentrated, and purified by prep-HPLC, column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 1%-35%,8min) to give 3-((2-((3- aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (250 mg, 603.13 µmol, 88.68% yield, 100% purity) as white solid. 1H NMR (400 MHz, MeOD-d4) δ = 7.79 (d, J = 7.3 Hz, 1H), 7.62 (br d, J = 6.0 Hz, 1H), 6.99 (d, J = 1.1 Hz, 1H), 4.23 - 4.12 (m, 1H), 4.10 - 4.03 (m, 2H), 3.60 (dt, J = 2.1, 11.7 Hz, 2H), 3.48 (t, J = 6.9 Hz, 2H), 3.13 - 3.07 (m, 2H), 2.71 (q, J = 7.3Hz, 2H), 2.14 - 1.98 (m, 4H), 1.93 (dt, J = 3.8, 11.8 Hz, 2H), 1.33 (t, J = 7.4 Hz, 3H) LC- MS (ES+, m/z): 415.1 [(M+H)+]. Rt=1.652 min, 100 % purity. HRMS (EI): m/z [M]+ found: 415.2568. HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h.
Step 4: 3-((2-((3-Acrylamidopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00639] To a solution of 3-((2-((3-aminopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (60 mg, 133.05 µmol, 1 eq, HCl) TEA (134.63 mg, 1.33 mmol, 185.19 µL, 10 eq), PyBrOP (120.00 mg, 257.41 µmol, 1.93 eq) in DMF (2 mL) at 25 °C, acrylic acid (38.35 mg, 532.19 µmol, 36.52 µL, 4 eq) was added. The mixture was allowed to warm to 25 °C for 10 h. LCMS indicated the reaction was complete. The reaction was poured into water (10 mL) and extracted with EtOAc (6 mL*2). The organic layers were combined, washed with water (3 mL*2), saturated brine (3 mL), dried (Na2SO4), filtered, concentrated, and then purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min) to give 3-((2-((3-acrylamidopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (9.5 mg, 20.28 µmol, 15.24% yield, 100% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 12.49 - 12.28 (m, 1H), 12.10 (br s, 1H), 8.19 (br s, 1H), 8.06 - 7.90 (m, 1H), 7.84 - 7.74 (m, 2H), 7.68 - 7.54 (m, 1H), 7.31 - 7.19 (m, 1H), 7.12 (br d, J = 7.0 Hz, 1H), 7.04 (br s, 1H), 6.28 - 6.16 (m, 1H), 6.12 - 6.04 (m,1H), 5.60 (dd, J = 2.1, 10.0 Hz, 1H), 4.16 - 4.06 (m, 1H), 3.91 (br d, J = 10.6 Hz, 2H), 3.46 (br t, J = 11.1 Hz, 2H), 3.30 - 3.22 (m, 4H), 2.67 - 2.62 (m, 2H), 1.88 (br d, J = 12.6 Hz, 2H), 1.78 - 1.64 (m, 4H), 1.23 (t, J = 7.3 Hz, 3H); LC-MS (ES+, m/z): 469.2 [(M+H)+]. Rt=1.912 min, 100 % purity. HRMS (EI): m/z [M]+ found: 469.2694 [00640] The following compounds were prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 3-((2-((3- acrylamidopropyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (Compound 24): Compound 25 6-Ethyl-3-((2-((3-propiolamidopropyl)amino)pyridin-4-yl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00641] 1H NMR (400 MHz, DMSO-d6) δ = 12.37 (br s, 1H), 12.11 (br s, 1H), 8.82 (br t, J = 5.5 Hz, 1H), 8.04 - 7.89 (m, 1H), 7.87 -7.81 (m, 2H), 7.65 (br s, 1H), 7.26 (br d, J = 6.8 Hz, 1H), 7.13 (br d, J = 7.3 Hz, 1H), 7.03 (br s, 1H), 4.19 - 4.04 (m, 2H), 3.91 (br d, J = 10.4 Hz, 2H), 3.50 - 3.43 (m, 2H), 3.30 - 3.26 (m, 2H), 3.23 - 3.18 (m, 2H), 2.68 - 2.64 (m, 2H), 1.88 (br dd, J = 2.1, 12.6 Hz, 2H), 1.78 - 1.66 (m, 4H), 1.25 - 1.21 (m, 3H)(TFA salt); MW 466.54; LCMS 467.2 [(M+H)+]; Rt= 1.887 min, 99.09% purity; HRMS 467.2503. Compound 26 3-((2-((3-(But-2-ynamido)propyl)amino)pyridin-4-yl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00642] 1H NMR (400 MHz, DMSO-d6) δ = 12.62 - 12.14 (m, 1H), 11.76 - 11.48 (m, 1H), 8.54 (br t, J = 5.5 Hz, 1H), 7.81 (d, J = 6.4 Hz, 1H), 7.71 (br s, 1H), 7.48 (br s, 1H), 7.14 - 6.95 (m, 2H), 6.73 (br d, J = 6.2 Hz, 1H), 4.17 - 4.06 (m, 1H), 3.92 (br dd, J = 1.6, 11.5 Hz, 2H), 3.50 - 3.42 (m, 2H), 3.27 - 3.21 (m, 2H), 3.15 (q, J = 6.6 Hz, 2H), 2.65 - 2.58 (m, 2H), 1.97 - 1.87 (m, 5H), 1.73 - 1.62 (m, 4H), 1.25 - 1.19 (m, 3H); MW 480.56; LCMS 481.2 [(M+H)+]; Rt= 1.930 min, 100% purity; HRMS 481.2684. Example 17 (Compound 27) 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((3-(vinylsulfonamido)propyl)amino)pyridin-4- yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((3- (vinylsulfonamido)propyl)amino)pyridin-4-yl)amino)pyrazine-2-carboxamide
[00643] To a solution of 3-((2-((3-aminopropyl)amino)pyridin-4-yl)amino)-6-methyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (130 mg, 288.27 µmol, 1 eq, HCl), DIPEA (372.56 mg, 2.88 mmol, 502.10 µL, 10 eq) in DMF (2 mL) at 0 °C, 2-chloroethanesulfonyl chloride (56.39 mg, 345.93 µmol, 36.15 µL, 1.2 eq) was added. The mixture was stirred to 0 °C for 1 h. LCMS indicated the reaction
was complete. The mixture was concentrated and then purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobilephase: [water(TFA)-ACN];B%: 10%-40%,8min) to give 6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)-3-((2-((3-(vinylsulfonamido)propyl) amino)pyridin-4- yl)amino)pyrazine-2-carboxamide (8.0 mg, 15.85 µmol, 5.50% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 12.40 - 12.24 (m, 1H), 12.16 - 11.98 (m, 1H), 8.09 - 7.91 (m, 1H), 7.82 (br d, J = 6.6 Hz, 2H), 7.69 - 7.55 (m, 1H), 7.37 (t, J = 5.7 Hz, 1H), 7.31 - 7.22 (m, 1H), 7.16 - 7.09 (m, 1H), 7.06 - 6.98 (m, 1H), 6.71 (dd, J =10.0, 16.5 Hz, 1H), 6.09 - 5.94 (m, 2H), 4.17 - 4.06 (m, 1H), 3.91 (br d, J = 10.0 Hz, 2H), 3.51 - 3.38 (m, 4H), 3.01 - 2.90 (m, 2H), 2.67 - 2.62 (m, 2H), 1.94 - 1.84 (m, 2H), 1.82 - 1.60 (m, 4H), 1.23 (t, J = 7.3 Hz, 3H). LC-MS (ES+, m/z): 505.1 [(M+H)+]. Rt=1.941 min, 100 % purity. HRMS (EI): m/z [M]+ found: 505.2334 General Synthetic Scheme VI
wherein R2b and R4 are as described herein and n is an integer between 1 and 3.
Synthesis of Intermediate V 3-((3-(2-Aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: (3-Bromo-5-methoxyphenyl)methanol
[00644] To a solution of 3-bromo-5-methoxybenzoic acid (22.5 g, 97.38 mmol, 1 eq) in THF (100 mL) was added BH3.THF (1 M, 243.46 mL, 2.5 eq) at 0 °C. The mixture was stirred at 25 °C for 4 hr. LCMS showed the reaction was completed. The reaction mixture was slowly added into MeOH(50 mL).Then the combined organic phase was stirred at 70 °C for 1h, filtered and concentrated in vacuum. The residue was poured into EA(50 mL) and H2O(50mL).The aqueous phase was extracted with ethyl acetate (30 mL*3). The combined organic phase was washed with saturated brine (10 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to afford (3-bromo-5-methoxyphenyl)methanol (40 g, crude) as white oil. LC-MS (ES+, m/z): 214.9 [(M-H)-]; Rt = 1.966 min Step 2: 1-Bromo-3-(bromomethyl)-5-methoxybenzene
[00645] To a solution of (3-bromo-5-methoxyphenyl)methanol (20 g, 92.14 mmol, 1 eq) in DCM (50 mL) was added tribromophosphane (49.88 g, 184.28 mmol, 2 eq). The mixture was stirred at 25 °C for 2 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was quenched by addition saturated Na2CO320 mL at 0 °C, and extracted with DCM(30 mL * 3). The combined organic layers were washed with saturated brine (10 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford 1-bromo-3-(bromomethyl)-5-methoxybenzene (45 g, 160.74 mmol, 87.23% yield, N/A purity) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 7.24 (s, 1H), 7.10 (s, 1H), 7.06 - 7.02 (m, 1H), 4.64 (s, 2H), 3.77 (s, 3H). LC-MS (ES+, m/z): no found [(M+H)+]; Rt=0.827 min.
Step 3: 2-(3-Bromo-5-methoxyphenyl)acetonitrile
[00646] A mixture of 1-bromo-3-(bromomethyl)-5-methoxy-benzene (25 g, 89.30 mmol, 1 eq), TBAF/THF (1 M, 105.00 mL, 1.18 eq), TMSCN (10.54 g, 106.27 mmol, 13.29 mL, 1.19 eq) in MeCN (50 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 3 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (50 ml), extracted with EA(30 mL*3). The organic phase was separated, washed with saturated brine(15 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure. To afford 2-(3-bromo-5-methoxyphenyl)acetonitrile (15 g, crude) as yellow oil.1H NMR (400 MHz, DMSO- d6) δ = 7.17 - 7.08 (m, 2H), 6.96 - 6.89 (m, 1H), 4.03 - 3.98 (m, 2H), 3.78 - 3.75 (m, 3H). LC-MS (ES+, m/z): no found [(M+H)+]; Rt=0.774 min. Step 4: tert-Butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate
[00647] A mixture of 2-(3-bromo-5-methoxyphenyl)acetonitrile (11 g, 48.66 mmol, 1 eq), tert-butyl carbamate (6.84 g, 58.39 mmol, 1.2 eq), Pd(OAc)2 (546.20 mg, 2.43 mmol, 0.05 eq), XPhos (2.32 g, 4.87 mmol, 0.1 eq) and Cs2CO3 (22.19 g, 68.12 mmol, 1.4 eq) in dioxane (30 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 100 °C for 4 hr under N2 atmosphere. LCMS showed the reaction was completed. The residue was poured into saturated EDTA (50 mL) and stirred for 60 min. The aqueous phase was extracted with ethyl acetate (30 mL*2).The combined organic phase was washed with saturated brine (30 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford tert-butyl (3-(cyanomethyl)-5-methoxyphenyl)carbamate (4.9 g, crude) as yellow solid. LC-MS (ES+, m/z): 207.1[(M+H)+]; Rt=0.661 min. Step 5: 2-(3-Amino-5-methoxyphenyl)acetonitrile
[00648] A mixture of tert-butyl N-[3-(cyanomethyl)-5-methoxy-phenyl]carbamate (4.9 g, 18.68 mmol, 1 eq) in HCl/EtOAc (4M,10 mL,2.14 eq) was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (30 ml) ,extracted with EA(30*3mL).The organic phase was separated, washed with saturated brine(15 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to afford 2-(3-amino-5-methoxyphenyl)acetonitrile (1.7 g, crude) as
yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 6.11 (s, 1H), 6.05 (s, 1H), 6.01 (s, 1H), 5.24 (br s, 2H), 3.81 - 3.74 (m, 2H), 3.31 (s, 3H), 1.27 - 1.01 (m, 1H). LC-MS (ES+, m/z): 163.1[(M+H)+]; Rt=0.177 min. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 6: 3-((3-(Cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00649] To a solution of 2-(3-amino-5-methoxyphenyl)acetonitrile (200 mg, 1.23 mmol, 1 eq), 3- chloro-6-ethyl-5-(tetrahydropyran-4-ylamino)pyrazine-2-carboxamide (351.12 mg, 1.23 mmol, 1 eq), t- AmylOH (5 mL) was added Xantphos (71.35 mg, 123.31 µmol, 0.1 eq), Cs2CO3 (1.81 g, 5.55 mmol, 4.5 eq) and Xantphos Pd G4 (106.11 mg, 123.31 µmol, 0.1 eq). The mixture was stirred at 100 °C for 3 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove solvent. The residue and extracted with EA (10 mL*3). The combined organic layers were washed with saturated brine (5 ml*3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to afford 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6- ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 243.62 µmol, 19.76% yield, N/A purity) as yellow solid. LC-MS (ES+, m/z): 411.1 [(M+H)+]; Rt=0.738 min. Step 7: 3-((3-(2-Aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00650] To a solution of 3-((3-(cyanomethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 243.62 µmol, 1 eq), NH3.H2O (121.97 mg, 1.22 mmol, 134.03 µL, 35% purity, 5 eq) in THF (3 mL) was added Raney-Ni (20.87 mg, 243.62 µmol, 1 eq) under N2 atmosphere. The suspension was degassed and purged with H2 for 3 times. The mixture was stirred under H2 (50 PSI) at 25 °C for 2 hr. LCMS showed the reaction was completed. The reaction
mixture was filtered, then Raney-Ni was gave back to the laboratory. The residue was purified by prep- HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 15%- 45%,8min) to afford 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (30 mg, 56.76 µmol, 23.30% yield, 99.09 purity, TFA) as yellow solid. 1H NMR (400 MHz, DMSO-d6,TFA) δ = 11.28 - 11.22 (m, 1H), 7.83 - 7.65 (m, 3H), 7.61 - 7.55 (m, 1H), 7.54 - 7.51 (m, 1H), 7.33 - 7.24 (m, 1H), 6.90 - 6.81 (m, 1H), 6.77 - 6.71 (m, 1H), 6.47 - 6.40 (m, 1H), 4.17 - 4.04 (m, 1H), 3.97 - 3.92 (m, 1H), 3.91 - 3.88 (m, 1H), 3.79 - 3.73 (m, 3H), 3.43 - 3.37 (m, 2H), 3.12 - 3.00 (m, 2H), 2.83 - 2.75 (m, 2H), 2.62 - 2.54 (m, 2H), 1.90 - 1.81 (m, 2H), 1.71 - 1.57 (m, 2H), 1.18 (t, J = 7.3 Hz, 3H);1H NMR (400 MHz, DMSO-d6,TFA) δ = 7.52 (t, J = 2.1 Hz, 1H), 6.74 (s, 1H), 6.45 (s, 1H), 4.14 - 4.04 (m, 1H), 3.96 - 3.87 (m, 2H), 3.80 - 3.73 (m, 3H), 3.49 - 3.28 (m, 2H), 3.12 - 2.95 (m, 2H), 2.85 - 2.75 (m, 2H), 2.61 - 2.53 (m, 2H), 1.85 (br dd, J = 2.3, 12.6 Hz, 2H), 1.64 (dq, J = 4.4, 12.0 Hz, 2H), 1.17 (t, J = 7.3 Hz, 3H) LC-MS (ES+, m/z): 415.1 [(M+H)+]; Rt=1.901 min, 99.09% purity; HRMS: 415.2488. Example 18 (Compound 28) 3-((3-(2-(4-Acrylamidobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-Butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-4-oxobutyl)carbamate
[00651] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (150 mg, 361.88 µmol, 1 eq), DIPEA (70.16 mg, 542.82 µmol, 94.55 µL, 1.5 eq), HATU (206.40 mg, 542.82 µmol, 1.5 eq) in DMF (3 mL) was added 4-(tert- butoxycarbonylamino)butanoic acid (73.55 mg, 361.88 µmol, 1 eq). The mixture was stirred at 25 °C for 4 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into water(20 ml), extracted with EA 10 mL (10 mL * 3). The combined organic layers were washed with saturated brine 9 mL (3 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to afford tert-butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)- 5-methoxyphenethyl)amino)-4-oxobutyl)carbamate (150 mg, crude) as yellow oil. LC-MS (ES+, m/z): 513.2[(M+H)+]; Rt=0.765 min.
Step 2: 3-((3-(2-(4-Aminobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
[00652] To a solution of tert-butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-4-oxobutyl)carbamate (150 mg, 250.12 µmol, 1 eq) (150 mg, 250.12 µmol, 1 eq) in HCl/EtOAc (4 M,20 mL,319.85 eq). The mixture was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove HCl/EtOAc. The residue was poured into H2O (20 ml), added saturated NaHCO3 solution until the mixture was neutral, extracted with EA (20mL * 3). The combined organic layers were washed with saturated brine (3 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (HCl condition:column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(HCl)-ACN];B%: 15%-40%,8min) to afford 3- ((3-(2-(4-aminobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (100 mg, 200.16 µmol, 80.03% yield, 100% purity, HCl) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.23 (s, 1H), 8.02 (t, J = 5.5 Hz, 1H), 7.73 (br s, 3H), 7.59 (br s, 1H), 7.37 - 7.25 (m, 2H), 6.89 - 6.79 (m, 2H), 6.40 (s, 1H), 4.13 (br dd, J = 4.0, 11.3 Hz, 1H), 3.96 - 3.88 (m, 2H), 3.75 (s, 3H), 3.42 - 3.35 (m, 2H), 3.28 (q, J = 6.8 Hz, 2H), 2.82 - 2.72 (m, 2H), 2.59 (d, J = 7.4 Hz, 2H), 2.47 - 2.44 (m, 2H), 2.16 (t, J = 7.2 Hz, 2H), 1.86 (br d, J = 10.7 Hz, 2H), 1.79 - 1.60 (m, 4H), 1.19 (t, J = 7.4 Hz, 3H);1H NMR (400 MHz, METHANOL-d4) δ = 6.00 (t, J = 2.1 Hz, 1H), 5.20 - 5.09 (m, 1H), 4.93 - 4.77 (m, 1H), 2.76 - 2.65 (m, 1H), 2.43 (br dd, J = 3.6, 11.3 Hz, 2H), 2.26 - 2.19 (m, 3H), 2.08 - 1.98 (m, 2H), 1.86 (t, J = 7.0 Hz, 2H), 1.41 - 1.33 (m, 2H), 1.20 (t, J = 7.0 Hz, 2H), 1.08 - 0.99 (m, 2H), 0.78 - 0.69 (m, 2H), 0.49 - 0.39 (m, 2H), 0.38 - 0.29 (m, 2H), 0.20 - 0.07 (m, 2H), -0.27 - -0.34 (m, 3H); LC-MS (ES+, m/z): 500.2[(M+H)+]; Rt=1.942 min;100% purity;HRMS:500.2972. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 3: 3-((3-(2-(4-Acrylamidobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro- 2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00653] To a solution of 3-((3-(2-(4-aminobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (50 mg, 100.08 µmol, 1 eq) ,TEA (50.63 mg, 500.40 µmol, 69.65 µL, 5 eq) in DCM (10 mL) was added prop-2-enoyl chloride (9.06 mg, 100.08 µmol,
8.16 µL, 1 eq) at 0 °C. The mixture was stirred at 0 °C for 1 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (neutral condition:column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 25%-50%,10min) to 3-((3-(2-(4- acrylamidobutanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (15 mg, 26.49 µmol, 26.47% yield, 97.78% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.23 (s, 1H), 8.06 (t, J = 5.5 Hz, 1H), 7.90 (t, J = 5.6 Hz, 1H), 7.56 (br s, 1H), 7.29 (d, J = 2.0 Hz, 2H), 6.86 (s, 1H), 6.82 (d, J = 7.6 Hz, 1H), 6.38 (s, 1H), 6.21 - 6.14 (m, 1H), 6.06 (d, J = 2.4 Hz, 1H), 5.57 - 5.52 (m, 1H), 4.13 (br d, J = 7.2 Hz, 1H), 3.94 - 3.88 (m, 2H), 3.74 (s, 3H), 3.43 - 3.38 (m, 2H), 3.27 - 3.23 (m, 2H), 3.12 - 3.05 (m, 2H), 2.60 - 2.57 (m, 2H), 2.45 - 2.43 (m, 2H), 2.08 - 2.03 (m, 2H), 1.86 (br d, J = 10.3 Hz, 2H), 1.67 - 1.58 (m, 4H), 1.18 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 554.2 [(M+H)+]; Rt=2.242 min; 97.78% purity; HRMS:554.3125. Example 19 (Compound 29) 3-((3-(2-(3-Acrylamidopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-Butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)carbamate
[00654] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (250 mg, 603.14 µmol, 1 eq), DIPEA (116.93 mg, 904.70 µmol, 157.58 µL, 1.5 eq), HATU (344.00 mg, 904.70 µmol, 1.5 eq) in DMF (0.5 mL) was added 3-((tert- butoxycarbonyl)amino)propanoic acid (136.94 mg, 723.76 µmol, 2.07 µL, 1.2 eq). The mixture was stirred at 25 °C for 4 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into water(5 ml), extracted with EA (10 mL * 5). The combined organic layers were washed with saturated brine (3 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to afford tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)carbamate (230 mg, crude) as yellow oil. LC-MS (ES+, m/z): 586.3[(M+H)+]; Rt=0.787 min.
Step 2: 3-((3-(2-(3-Aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
[00655] A mixture of tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)carbamate (230 mg, 392.70 µmol, 1 eq) in HCl/EtOAc (4 M,20 Ml,203.72 eq) was stirred at 20 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove HCl/EtOAc. The residue was poured into H2O (50 ml), added NaHCO3 until the reaction mixture was neutral, extracted with EA (20 mL * 3). The combined organic layers were washed with saturated brine (3 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (HCl condition:column: Phenomenex Luna 80*30mm*3um; mobile phase: [water(HCl)-ACN];B%: 5%-45%,8min)to afford 3-((3-(2-(3-aminopropanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (180 mg, 370.69 µmol, 94.40% yield, 100% purity, HCl) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.26 (s, 1H), 8.22 (t, J = 5.5 Hz, 1H), 7.72 (br s, 3H), 7.59 (br s, 1H), 7.36 (s, 1H), 7.30 (br s, 1H), 6.90 - 6.82 (m, 2H), 6.42 (s, 1H), 4.19 - 4.10 (m, 1H), 3.94 (br d, J = 6.8 Hz, 2H), 3.77 (s, 3H), 3.51 - 3.42 (m, 2H), 3.35 - 3.30 (m, 2H), 3.02 - 2.93 (m, 2H), 2.70 - 2.66 (m, 2H), 2.60 (d, J = 7.4 Hz, 2H), 2.46 - 2.44 (m, 2H), 1.88 (br d, J = 10.4 Hz, 2H), 1.73 - 1.62 (m, 2H), 1.20 (t, J = 7.3 Hz, 3H);1H NMR (400 MHz, METHANOL-d4) δ = 7.57 (t, J = 2.1 Hz, 1H), 6.79 (s, 1H), 6.47 (s, 1H), 4.33 - 4.25 (m, 1H), 4.02 (br dd, J = 3.0, 11.6 Hz, 2H), 3.82 (s, 3H), 3.66 - 3.58 (m, 2H), 3.50 - 3.47 (m, 2H), 3.34 (br s, 2H), 3.18 - 3.13 (m, 2H), 2.79 (t, J = 7.2 Hz, 2H), 2.67 - 2.51 (m, 4H), 2.06 - 2.00 (m, 2H), 1.79 - 1.65 (m, 2H), 1.28 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 486.2[(M+H)+]; Rt=1.927 min; 100% purity; HRMS:486.2828. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 3: 3-((3-(2-(3-Acrylamidopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro- 2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00656] To a solution of 3-((3-(2-(3-aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (50 mg, 102.97 µmol, 1 eq) in DCM (1 mL) was added TEA (104.19 mg, 1.03 mmol, 143.32 µL, 10 eq) and prop-2-enoyl chloride (11.18 mg, 123.56
µmol, 10.08 µL, 1.2 eq) at 0 °C .The mixture was stirred at 0 °C for 1 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove solvent. The residue was purified by prep-HPLC (neutral condition:column: Waters Xbridge Prep OBD C18150*40mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 20%-50%,8min). To afford 3- ((3-(2-(3-acrylamidopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (15 mg, 27.80 µmol, 27.00% yield, 100% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.30 - 11.20 (m, 1H), 8.17 - 8.08 (m, 1H), 8.03 - 7.95 (m, 1H), 7.60 - 7.55 (m, 1H), 7.33 - 7.27 (m, 2H), 6.88 - 6.81 (m, 2H), 6.42 - 6.38 (m, 1H), 6.25 - 6.15 (m, 1H), 6.09 - 6.01 (m, 1H), 5.57 - 5.51 (m, 1H), 4.19 - 4.08 (m, 1H), 3.96 - 3.88 (m, 2H), 3.78 - 3.73 (m, 3H), 3.45 - 3.37 (m, 2H), 3.30 - 3.25 (m, 4H), 2.60 - 2.57 (m, 2H), 2.48 - 2.48 (m, 2H), 2.29 - 2.23 (m, 2H), 1.91 - 1.83 (m, 2H), 1.71 - 1.59 (m, 2H), 1.22 - 1.16 (m, 3H); LC-MS (ES+, m/z): 540.2[(M+H)+]; Rt=2.234 min; 99.00% purity; HRMS:540.2969. Example 20 (Compound 31) 6-Ethyl-3-((3-methoxy-5-(2-(3-propiolamidopropanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: 6-Ethyl-3-((3-methoxy-5-(2-(3-propiolamidopropanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00657] A mixture of 3-((3-(2-(3-aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (50 mg, 102.97 µmol, 1 eq), prop-2-ynoic acid (8.66 mg, 123.56 µmol, 7.59 µL, 1.2 eq), BOP (68.31 mg, 154.46 µmol, 1.5 eq), DIPEA (19.96 mg, 154.46 µmol, 26.90 µL, 1.5 eq) in DMF (1 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 2 hr under N2 atmosphere. LCMS showed the reaction mixture was completed. The reaction mixture was poured into H2O (20 ml), extracted with DCM (20 mL * 3). The combined organic layers were washed with saturated brine (15 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (neutral condition:column: Waters Xbridge BEH C18100*25mm*5um;mobile phase: [water( NH4HCO3)- ACN];B%: 20%-50%,10min) to afford 6-ethyl-3-((3-methoxy-5-(2-(3-
propiolamidopropanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (15 mg, 26.06 µmol, 25.31% yield, 97.73% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.25 (s, 1H), 8.73 (br t, J = 5.7 Hz, 1H), 8.01 (t, J = 5.3 Hz, 1H), 7.57 (br s, 1H), 7.31 (br d, J = 2.0 Hz, 2H), 6.89 - 6.86 (m, 1H), 6.86 - 6.81 (m, 1H), 6.40 (s, 1H), 4.20 - 4.11 (m, 1H), 4.11 - 4.08 (m, 1H), 3.93 (br d, J = 8.1 Hz, 2H), 3.76 (s, 3H), 3.45 - 3.37 (m, 2H), 3.29 - 3.22 (m, 4H), 2.57 (br s, 4H), 2.25 (t, J = 7.3 Hz, 2H), 1.87 (br d, J = 12.5 Hz, 2H), 1.65 (dq, J = 3.9, 12.0 Hz, 2H), 1.20 (t, J = 7.3 Hz, 3H); LC-MS (ES+, m/z): 538.2 [(M+H)+]; Rt=2.176 min; 97.73% purity; HRMS:538.2822. Example 21 (Compound 30) 6-Ethyl-3-((3-methoxy-5-(2-(4-(N-methylacrylamido)butanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-Butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-4-oxobutyl)(methyl)carbamate
[00658] A mixture of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (400 mg, 965.02 µmol, 1 eq), 4-((tert- butoxycarbonyl)(methyl)amino)butanoic acid (251.59 mg, 1.16 mmol, 1.2 eq), HATU (550.39 mg, 1.45 mmol, 1.5 eq), DIPEA (623.61 mg, 4.83 mmol, 840.44 µL, 5 eq) in DMF (2 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 4 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (20 ml), extracted with DCM (10 mL * 3). The combined organic layers were washed with saturated brine (3 mL * 3), dried over Na2SO4, filtered and concentrated under reduced pressure to afford tert-butyl (4-((3-((3-carbamoyl-5- ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-4- oxobutyl)(methyl)carbamate (490 mg, crude) as yellow oil. LC-MS (ES+, m/z): 614.2 [(M+H)+]; Rt=1.961 min.
Step 2:6-Ethyl-3-((3-methoxy-5-(2-(4-(methylamino)butanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00659] A mixture of tert-butyl (4-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-4-oxobutyl)(methyl)carbamate (490 mg, 798.38 µmol, 1 eq) in HCl/EtOAc (4 M, 30 mL, 150.31 eq) was stirred at 20 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (HCl condition:column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(HCl)-ACN];B%: 20%-50%,8min) to afford 6-ethyl-3-((3-methoxy- 5-(2-(4-(methylamino)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (300 mg, 545.36 µmol, 68.31% yield, 100% purity, HCl) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.22 (s, 1H), 8.40 (br s, 2H), 8.01 (t, J = 5.5 Hz, 1H), 7.57 (br s, 1H), 7.34 - 7.31 (m, 1H), 7.27 (br s, 1H), 6.85 - 6.80 (m, 2H), 6.39 (s, 1H), 4.17 - 4.07 (m, 1H), 3.91 (br d, J = 8.3 Hz, 2H), 3.74 (s, 3H), 3.47 - 3.37 (m, 4H), 3.29 - 3.17 (m, 4H), 2.87 - 2.79 (m, 2H), 2.62 - 2.57 (m, 2H), 2.15 (t, J = 7.1 Hz, 2H), 1.88 - 1.82 (m, 2H), 1.80 - 1.71 (m, 2H), 1.70 - 1.58 (m, 2H), 1.18 (t, J = 7.4 Hz, 3H);1H NMR (400 MHz, METHANOL-d4) δ = 6.02 (t, J = 2.1 Hz, 1H), 5.22 (s, 1H), 4.92 (s, 1H), 2.74 (ddd, J = 4.1, 11.1, 15.4 Hz, 1H), 2.47 (br dd, J = 3.0, 12.0 Hz, 2H), 2.27 (s, 3H), 2.10 - 2.03 (m, 2H), 1.94 - 1.90 (m, 2H), 1.43 (t, J = 7.4 Hz, 2H), 1.23 (t, J = 7.0 Hz, 2H), 1.16 - 1.12 (m, 3H), 1.10 - 1.03 (m, 2H), 0.78 (t, J = 7.0 Hz, 2H), 0.47 (br dd, J = 2.3, 12.6 Hz, 2H), 0.37 (quin, J = 7.2 Hz, 2H), 0.17 (dq, J = 4.5, 12.2 Hz, 2H), -0.27 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 514.2 [(M+H)+]; Rt=2.007 min; 100% purity; HRMS:514.3158. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 3: 6-Ethyl-3-((3-methoxy-5-(2-(4-(N-methylacrylamido)butanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00660] To a solution of 6-ethyl-3-((3-methoxy-5-(2-(4- (methylamino)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (60 mg, 116.82 µmol, 1 eq) in DCM (1 mL) was added TEA (59.10 mg, 584.08 µmol, 81.30 µL, 5 eq) and prop-2-enoyl chloride (12.69 mg, 140.18 µmol, 11.43 µL, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 1 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove solvent. The residue was purified by prep-
HPLC (neutral condition:column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water (NH4HCO3)-ACN]; B%: 25%-50%, 10 min) to afford 6-ethyl-3-((3-methoxy-5-(2-(4-(N- methylacrylamido)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (13 mg, 22.90 µmol, 19.60% yield, 100% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 7.90 (br d, J = 4.4 Hz, 1H), 7.56 (br s, 1H), 7.28 (br s, 2H), 6.90 - 6.77 (m, 2H), 6.70 (dd, J = 10.4, 16.6 Hz, 1H), 6.40 (s, 1H), 6.11 - 6.04 (m, 1H), 5.66 - 5.58 (m, 1H), 4.13 (br d, J = 6.7 Hz, 1H), 3.92 (br d, J = 8.5 Hz, 2H), 3.74 (s, 3H), 3.45 - 3.37 (m, 2H), 3.29 - 3.23 (m, 4H), 2.97 (s, 1H), 2.81 (s, 2H), 2.65 - 2.55 (m, 4H), 2.03 (td, J = 7.5, 15.4 Hz, 2H), 1.87 (br d, J = 13.0 Hz, 2H), 1.72 - 1.59 (m, 4H), 1.19 (t, J = 7.3 Hz, 3H);1H NMR (400 MHz, DMSO-d6) δ = 11.10 (s, 1H), 7.61 (br s, 1H), 7.23 (s, 1H), 6.90 (s, 1H), 6.70 - 6.62 (m, 1H), 6.51 (br d, J = 7.2 Hz, 1H), 6.41 (s, 1H), 6.05 (dd, J = 2.4, 16.8 Hz, 1H), 5.59 (dd, J = 2.5, 10.5 Hz, 1H), 4.16 (br dd, J = 4.5, 11.3 Hz, 1H), 3.91 (br d, J = 10.5 Hz, 2H), 3.79 - 3.73 (m, 3H), 3.47 - 3.38 (m, 2H), 3.36 - 3.26 (m, 4H), 2.89 (br s, 3H), 2.73 - 2.67 (m, 2H), 2.65 - 2.56 (m, 2H), 2.06 (t, J = 7.4 Hz, 2H), 1.90 (br d, J = 9.8 Hz, 2H), 1.76 - 1.61 (m, 4H), 1.21 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 568.4[(M+H)+]; Rt=2.590 min; 100% purity; HRMS:568.3221. Example 22 (Compound 34) 6-Ethyl-3-((3-methoxy-5-(2-(3-(N-methylacrylamido)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-Butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)(methyl)carbamate
[00661] A mixture of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (250 mg, 603.14 µmol, 1 eq), 3-[tert- butoxycarbonyl(methyl)amino]propanoic acid (122.58 mg, 603.14 µmol, 1 eq), HATU (344.00 mg, 904.70 µmol, 1.5 eq), DIPEA (389.75 mg, 3.02 mmol, 525.27 µL, 5 eq) in DMF (1 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 4 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into H2O (20 ml), extracted with DCM (10 mL * 3). The combined organic layers were washed with saturated brine (10 mL * 3),
dried over Na2SO4, filtered and concentrated under reduced pressure to afford tert-butyl (3-((3-((3- carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-3-oxopropyl)(methyl)carbamate (300 mg, crude) as yellow oil. LC-MS (ES+, m/z): 600.2 [(M+H)+]; Rt=1.930 min. Step 2: 6-Ethyl-3-((3-methoxy-5-(2-(3-(methylamino)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00662] A mixture of tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl)(methyl)carbamate (300 mg, 500.23 µmol, 1 eq), HCl/EtOAc (4 M, 2.50 mL, 20 eq) and then the mixture was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (HCl condition:column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(HCl)-ACN];B%: 20%-40%,8min) to afford 6- ethyl-3-((3-methoxy-5-(2-(3-(methylamino)propanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran- 4-yl)amino)pyrazine-2-carboxamide (200 mg, 370.25 µmol, 74.02% yield, 99.24% purity, HCl) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 8.40 (br s, 2H), 8.23 (t, J = 5.4 Hz, 1H), 7.58 (br s, 1H), 7.36 (s, 1H), 7.28 (br s, 1H), 6.88 - 6.80 (m, 2H), 6.41 (s, 1H), 4.18 - 4.08 (m, 1H), 3.93 (br dd, J = 2.8, 11.3 Hz, 2H), 3.75 (s, 3H), 3.43 - 3.37 (m, 2H), 3.31 - 3.28 (m, 2H), 3.12 - 3.03 (m, 2H), 2.68 - 2.65 (m, 2H), 2.62 - 2.56 (m, 2H), 2.55 (br s, 2H), 2.52 - 2.52 (m, 3H), 1.92 - 1.83 (m, 2H), 1.72 - 1.59 (m, 2H), 1.19 (t, J = 7.4 Hz, 3H);1H NMR (400 MHz, METHANOL-d4) δ = 6.01 (t, J = 2.1 Hz, 1H), 5.24 (s, 1H), 4.92 (s, 1H), 2.74 (tt, J = 4.2, 11.2 Hz, 1H), 2.47 (br dd, J = 3.1, 11.6 Hz, 2H), 2.27 (s, 3H), 2.06 (dt, J = 1.8, 11.9 Hz, 2H), 1.93 (t, J = 7.1 Hz, 2H), 1.68 (t, J = 6.4 Hz, 2H), 1.24 (t, J = 7.1 Hz, 2H), 1.16 (s, 3H), 1.12 - 1.02 (m, 4H), 0.48 (br dd, J = 2.3, 12.6 Hz, 2H), 0.17 (dq, J = 4.4, 12.2 Hz, 2H), -0.27 (t, J = 7.4 Hz, 3H); LC-MS (ES+, m/z): 500.3[(M+H)+]; Rt=2.500 min, 99.24% purity; HRMS:500.2972. HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 3: 6-Ethyl-3-((3-methoxy-5-(2-(3-(N-methylacrylamido)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00663] To a solution of 6-ethyl-3-((3-methoxy-5-(2-(4-(methylamino)butanamido)ethyl)phenyl)amino)- 5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide in DCM is added TEA and prop-2-enoyl chloride at 0 °C. The mixture is stirred at 0 °C for approximately 1 hr under N2 atmosphere. The reaction mixture is concentrated under reduced pressure to remove solvent. The residue is purified by prep-HPLC (neutral condition:column: Waters Xbridge BEH C18100*30mm*10um; mobile phase: [water( NH4HCO3)-ACN]; B%: 25%-50%,10min) to afford 6-ethyl-3-((3-methoxy-5-(2-(3-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide. Example 23 (Compound 121) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethylpyrazin-2-yl)amino) phenoxy)propyl)amino)-1- oxopropan-2-yl)(methyl)carbamate
[00664] To a stirred solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (270 mg, 504.64 µmol, 1 eq), Pd(PPh3)4 (58.31 mg, 50.46 µmol, 0.1 eq), TEA (765.96 mg, 7.57 mmol, 1.05 mL, 15 eq) and DMF (4.5 mL) at 25 ℃ under N2, formic acid (116.13 mg, 2.52 mmol, 95.19 µL, 5 eq) was added at 110 °C, the reaction mixture was warmed to 110 °C and stirred for 2 hrs under N2. LCMS showed the reaction was completed. The reaction mixture was poured into saturated EDTA (20 mL) and EtOAc (20 mL) stirred at 25 oC for 1 h. The mixture was extracted with EA(20 mL*3) The organic layers were combined, washed with saturated brine (50 mL*1), dried with Na2SO4, filtered and concentrated to give crude product. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=50/1to 1/3) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethylpyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (130 mg, 259.69 µmol, 51.46% yield). LC-MS (ES+, m/z): 501.2[(M+H)+]. Rt=1.018 min.
Step 2: (S)-6-Ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)pyrazine-2- carboxamide
[00665] To the solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (130 mg, 259.69 µmol, 1 eq) and HCl/EA (259.69 µmol, 20 mL, 1 eq) was stirred at 25 °C for 1 h. LCMS showed the reaction was completed. The mixture was concentrated under reduced pressure to (S)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (90 mg, crude) as yellow solid. LC-MS (ES+, m/z): 401.2[(M+H)+]. Rt=0.792 Note:HCl/EA (4 M):HCl gas was bubbled into a solution EA at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EA (4 M). Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00666] A mixture of (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy) phenyl)amino)pyrazine-2-carboxamide (80 mg, 199.76 µmol, 1 eq), (E)-4-(dimethylamino)but-2-enoic acid (49.63 mg, 299.65 µmol, 1.5 eq, HCl), BOP (132.53 mg, 299.65 µmol, 1.5 eq) and DIPEA (129.09 mg, 998.82 µmol, 173.98 µL, 5 eq) in DMF (2 mL) was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (neutral condition: column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 15%-45%,8min) to give (S,E)-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2- carboxamide (17.57 mg, 34.34 µmol, 17.19% yield, 98.37% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.19 (s, 1H), 9.65 (br s, 1H), 8.41 - 8.28 (m, 2H), 8.16 - 7.83 (m, 2H), 7.42 (br s, 1H), 7.24 - 7.19 (m, 1H), 7.15 - 7.10 (m, 1H), 6.87 - 6.80 (m, 1H), 6.65 - 6.48 (m, 2H), 4.98 – 4.60 (m, 1H), 3.98 (t, J = 6.2 Hz, 2H), 3.93 - 3.80 (m, 2H), 3.29 - 3.21 (m, 2H), 2.97 (s, 2H), 2.85 - 2.69 (m, 9H), 1.92 - 1.81 (m, 2H), 1.35 - 1.25 (m, 6H); LC-MS (ES+, m/z): 512.3[(M+H)+]; Rt=2.631 min HRMS (EI): m/z [M+H]+ found: 512.2996.
Example 24 ((Compound 120) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methoxypyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methoxypyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate.
[00667] A mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (240 mg, 448.57 µmol, 1 eq) in NaOMe (807.78 mg, 4.49 mmol, 1 mL, 30% purity in MeOH, 10 eq), and then the mixture was stirred at 25 °C for 3 hours. LCMS showed the reaction was completed. The reaction was poured into H2O (30 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (30 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-TLC (SiO2, PE:EA=1:1). To afford tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5- ethyl-6-methoxypyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (130 mg, 245.00 µmol, 54.62% yield, N/A purity) as a yellow oil. LC-MS (ES+, m/z): 531.3 [(M+H)+]. Rt=0.901 min. Step 2: (S)-6-ethyl-5-methoxy-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide.
[00668] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methoxypyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (130 mg, 245.00 µmol, 1 eq) in HCl/dioxane (245.00 µmol, 5 mL, 1 eq) at 25 °C for 1 hour. LCMS showed the reaction was completed. The reaction was poured into H2O (10 mL) and adjust the pH to 9 with saturated Na2CO3 solution. The aqueous phase was extracted with ethyl acetate (5 mL*3). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. To afford (S)-6-ethyl-5-methoxy-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-
carboxamide (80 mg, 185.83 µmol, 75.85% yield) as a yellow oil. LC-MS (ES+, m/z): 431.3 [(M+H)+]. Rt=0.701 min. Note:HCl/dioxane (4 M):HCl was bubbled into a solution dioxane at 0 oC for 0.5 h. Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methoxypyrazine-2-carboxamide
[00669] A mixture of (S)-6-ethyl-5-methoxy-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (60 mg, 139.37 µmol, 1 eq), (E)-4-(dimethylamino)but-2-enoic acid (20.70 mg, 160.28 µmol, 1.15 eq), BOP (92.46 mg, 209.06 µmol, 1.5 eq) and DIPEA (144.10 mg, 1.11 mmol, 194.21 µL, 8 eq) in DMF (0.6 mL), and then the mixture was stirred at 25 °C for 1 hour. LCMS showed the reaction was completed. The reaction was filtered. The residue was purified by prep-HPLC(column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 20%-50%,8min). To afford (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut- 2-enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methoxypyrazine-2-carboxamide (14.03 mg, 24.69 µmol, 17.71% yield, 95.3% purity) as a white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.35 (s, 1H), 9.72 - 9.51 (m, 1H), 8.13 - 7.91 (m, 2H), 7.70 - 7.63 (m, 1H), 7.44 - 7.36 (m, 1H), 7.25 - 7.19 (t, 1H), 7.17 - 7.08 (m, 1H), 6.87 - 6.79 (m, 1H), 6.64 - 6.47 (m, 2H), 4.97-4.58 (m, 1H), 4.03 - 3.93 (m, 5H), 3.91 - 3.81 (m, 2H), 3.25 - 3.18 (m, 2H), 2.97 - 2.94 (m, 2H), 2.79 - 2.74 (m, 7H), 2.67 (s, 2H), 1.91 - 1.81 (m, 2H), 1.32 - 1.24 (m, 3H), 1.21 (t, J = 7.4 Hz, 3H). LC-MS (ES+, m/z): 542.2 [(M+H)+]. Rt=2.199 min . HRMS (EI): m/z [M+H]+: 542.3116. Example 25 (Compound 119) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2 enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5 (methylamino)pyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(methylamino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00670] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (350 mg, 523.33 µmol, 80% purity, 1 eq) and methanamine (353.34 mg, 5.23 mmol, 10 eq, HCl) in DMA (6 mL) was added DIEA (676.37 mg, 5.23 mmol, 911.55 µL, 10 eq). The mixture was stirred at 100 °C for 12 hours with sealed tube. The reaction mixture was quenched by addition H2O 20 ml at 20 °C, the mixture was extracted with EtOAc (3*20 mL). The combined organic layers were washed with saturated brine (1*20 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 1/1). To afford the title compound tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(methylamino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (240 mg, 453.15 µmol, 86.59% yield) as a yellow solid. LC-MS (ES+, m/z): 530.3[(M+H)+]; Rt=0.838 min. Step 2: (S)-6-ethyl-5-(methylamino)-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00671] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(methylamino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (240 mg, 453.15 µmol, 1 eq) in HCl/EtOAc (4 M, 4.80 mL, 42.37 eq). The mixture was stirred at 20 °C for 0.5 hour. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. This residue will use to next step directly. To afford the title compound (S)-6-ethyl-5-(methylamino)-3- ((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (190 mg, 442.36 µmol, 97.62% yield, N/A purity) as a white solid. LC-MS (ES+, m/z): 430.3[(M+H)+]; Rt=0.660min. Note:HCl/EA (4 M):HCl gas was bubbled into a solution EA at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EA (4 M)
Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethyl-5-(methylamino)pyrazine-2-carboxamide
[00672] To a solution of ((S)-6-ethyl-5-(methylamino)-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (130 mg, 278.98 µmol, 1 eq, HCl), (E)-4-(dimethylamino)but-2-enoic acid (69.31 mg, 418.48 µmol, 1.5 eq, HCl) and BOP (185.08 mg, 418.48 µmol, 1.5 eq) in DMF (3 mL) was added DIEA (288.45 mg, 2.23 mmol, 388.75 µL, 8 eq). The mixture was stirred at 25 °C for 12 hours. Filtered to give filtrate. The filtrate was purified by prep-HPLC (TFA condition: column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 1%-45%,8min). To afford the title compound (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(methylamino)pyrazine-2-carboxamide (84.24 mg, 155.81 µmol, 55.85% yield, 100% purity) as a white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.40 - 11.23 (s, 1H), 9.96 - 9.58 (m, 1H), 8.16 - 7.88 (m, 1H), 7.64 - 7.47 (m, 2H), 7.30 - 7.21 (m, 2H), 7.20 - 7.05 (m, 2H), 6.89 - 6.75 (m, 1H), 6.65 - 6.51 (m, 1H), 6.51 - 6.46 (m, 1H), 5.05 - 4.52 (m, 1H), 4.07 - 3.93 (m, 2H), 3.92 - 3.77 (m, 2H), 3.26 - 3.16 (m, 2H), 3.02 - 2.90 (m, 5H), 2.85 - 2.69 (m, 7H), 2.60 - 2.55 (m, 2H), 1.92 - 1.79 (m, 2H), 1.35 - 1.16 (m, 6H) LC-MS (ES+, m/z): 541.4[(M+H)+]; Rt=0.655min. HRMS (EI): m/z: 541.3287[(M+H)+] [00673] The following compounds were prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound (S,E)-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethyl-5- (methylamino)pyrazine-2-carboxamide (Compound 119): Example 26 (Compound 118) (S,E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
1H NMR (400 MHz, DMSO-d6) δ = 11.18 (s, 1H), 9.82 - 9.45 (m, 1H), 8.17 - 7.84 (m, 1H), 7.81 - 7.70 (m, 1H), 7.55 - 7.35 (m, 2H), 7.16 (s, 1H), 7.14 - 7.05 (m, 1H), 6.89 - 6.77 (m, 1H), 6.64 - 6.48 (m, 2H), 5.06 - 4.47 (m, 1H), 4.04 - 3.93 (m, 2H), 3.92 - 3.79 (m, 2H), 3.25 - 3.18 (m, 2H), 3.11 - 3.02 (m, 6H), 2.99 - 2.93 (m, 2H), 2.85 - 2.69 (m, 9H), 1.91 - 1.79 (m, 2H), 1.33 - 1.19 (m, 6H); MW 554.70; LCMS 555.3; HRMS 555.3425. Example 27 (Compound 124) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropylamino)pyrazine-2-carboxamide
1H NMR (400 MHz, DMSO-d6) δ = 11.28 (s, 1H), 9.71 (br s, 1H), 8.14 - 7.89 (m, 1H), 7.56 (br s, 1H), 7.51 - 7.44 (m, 1H), 7.26 (br s, 1H), 7.20 - 7.12 (m, 1H), 7.08 - 6.98 (m, 1H), 6.87 - 6.74 (m, 2H), 6.64 - 6.53 (m, 1H), 6.50 (dd, J = 1.9, 7.9 Hz, 1H), 5.02 - 4.54 (m, 1H), 4.36 - 4.23 (m, 1H), 3.96 (br t, J = 6.0 Hz, 2H), 3.91 - 3.81 (m, 2H), 3.27 - 3.19 (m, 2H), 2.95 (s, 2H), 2.79 - 2.74 (m, 7H), 2.58 (d, J = 7.4 Hz, 2H), 1.91 - 1.81 (m, 2H), 1.26 (m, 6H), 1.24 - 1.17 (m, 6H); MW 568.70; LCMS 569.3; HRMS 569.3697. Example 28 (Compound 122) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(pentan-3-ylamino)pyrazine-2- carboxamide
Step 1: tert-butyl N-[(1S)-2-[3-[3-[[3-carbamoyl-5-ethyl-6-(1-ethylpropylamino) pyrazin-2- yl]amino]phenoxy]propylamino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate
[00674] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (250 mg, 467.26 µmol, 1 eq) and pentan-3-amine (407.28 mg, 4.67 mmol, 544.49 µL, 10 eq) in DMA (5 mL) was added DIPEA (603.90 mg, 4.67 mmol, 813.88 µL, 10 eq). The mixture was stirred at 100 °C for 12 hrs. LCMS showed the reaction was completed. The residue was poured into ice-water (20 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (Dichloromethane:Methanol=20:1) to give tert-butyl N-[(1S)-2-[3-[3-[[3-carbamoyl- 5-ethyl-6-(1-ethylpropylamino) pyrazin-2-yl]amino]phenoxy]propylamino]-1-methyl-2-oxo-ethyl]-N- methyl-carbamate (200 mg, 341.45 µmol, 73.08% yield) was obtained as a yellow solid. LC-MS(ES+, m/z): 586.6[(M+H)+]; Rt=0.864 min Step 2: 6-ethyl-5-(1-ethylpropylamino)-3-[3-[3-[[(2S)-2-(methylamino)propanoyl] amino]pro poxy]anilino]pyrazine-2-carboxamide
[00675] To a mixture of tert-butyl N-[(1S)-2-[3-[3-[[3-carbamoyl-5-ethyl-6-(1-ethylpropylamino) pyrazin-2-yl]amino]phenoxy]propylamino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate (200 mg, 341.45 µmol, 1 eq) in HCl/EtOAc (6 mL ). The mixture was stirred at 25 °C for 30 min. LCMS showed the reaction was completed. The residue concentrated in vacuum. The mixture was washed by Ethyl acetate (3 mL *2), then concentrated in vacuum. Compound 6-ethyl-5-(1-ethylpropylamino)-3-[3-[3-[[(2S)-2- (methylamino)propanoyl] amino]pro poxy]anilino]pyrazine-2-carboxamide (170 mg, crude) was obtained as a yellow solid. LC-MS(ES+,m/z): 486.4[(M+H)+]; Rt=0.717 min. Step 3: 3-[3-[3-[[(2S)-2-[[(E)-4-(dimethylamino)but-2-enoyl]-methyl-amino] propanoyl]amino]propoxy]anilino]-6-ethyl-5-(1-ethylpropylamino)pyrazine-2-carboxamide
[00676] To a mixture of 6-ethyl-5-(1-ethylpropylamino)-3-[3-[3-[[(2S)-2-(methylamino)propanoyl] amino]pro poxy]anilino]pyrazine-2-carboxamide (150 mg, 308.88 µmol, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid (76.73 mg, 463.32 µmol, 1.5 eq, HCl) in DMF (1.5 mL) was added BOP (204.92 mg, 463.32 µmol, 1.5 eq) DIPEA (319.37 mg, 2.47 mmol, 430.41 µL, 8 eq) in one portion at 25
°C under N2. The mixture was stirred at 25 °C for 1 hour. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (TFA condition). (column: C18-1150*30mm *5um; mobile phase: [water(TFA)-ACN]; B%: 15%-60%, 8min) Compound 3-[3-[3-[[(2S)-2-[[(E)-4-(dimethylamino)but-2- enoyl]-methyl-amino] propanoyl]amino]propoxy]anilino]-6-ethyl-5-(1-ethylpropylamino)pyrazine-2- carboxamide (11.34 mg, 19.00 µmol, 6.15% yield) was obtained as a white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 9.76 - 9.48 (m, 1H), 7.94 (s, 1H), 7.55 (br s, 1H), 7.45 (s, 1H), 7.23 (br s, 1H), 7.19 - 7.13 (m, 1H), 7.09 - 6.99 (m, 1H), 6.83 (br d, J = 14.9 Hz, 1H), 6.66 (br d, J = 8.4 Hz, 1H), 6.63 - 6.53 (m, 1H), 6.50 (dd, J = 2.0, 8.0 Hz, 1H), 5.05 - 4.49 (m, 1H), 4.11 - 3.94 (m, 3H), 3.89 (br d, J = 6.8 Hz, 2H), 3.26 - 3.19 (m, 2H), 3.00 - 2.94 (m, 2H), 2.80 - 2.72 (m, 7H), 2.64 - 2.59 (m, 2H), 1.89 - 1.80 (m, 2H), 1.65 - 1.56 (m, 4H), 1.25 (br d, J = 7.1 Hz, 3H), 1.20 (t, J = 7.3 Hz, 3H), 0.94 - 0.86 (m, 6H). LC-MS (ES+, m/z): 597.4[(M+H)+]; Rt=2.280 min,; HRMS (EI): m/z [M+H]+:597.3878 [00677] The following compounds were prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound (S,E)-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(pentan- 3ylamino)pyrazine-2-carboxamide (Compound 122): Example 29 (Compound 116) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6- ethyl-5-(methyl(tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
1H NMR (400 MHz, DMSO-d6) δ = 11.15 (s, 1H), 10.34 - 10.21 (m, 1H), 8.24 - 7.91 (m, 1H), 7.72 (br s, 1H), 7.62 - 7.41 (m, 1H), 7.36 - 7.28 (m, 1H), 7.24 - 7.16 (m, 1H), 7.13 - 7.03 (m, 1H), 6.92 - 6.80 (m, 1H), 6.68 - 6.57 (m, 1H), 6.56 - 6.52 (m, 1H), 5.02 - 4.59 (m, 1H), 4.01 - 3.80 (m, 7H), 3.45 (br t, J = 11.2 Hz, 2H), 3.29 - 3.17 (m, 2H), 3.00 - 2.95 (m, 2H), 2.95 - 2.90 (m, 3H), 2.76 (br s, 9H), 1.92 - 1.79 (m, 4H), 1.71 - 1.63 (m, 2H), 1.33 - 1.21 (m, 6H); 1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 6.93 (br s, 1H), 6.82 (br t, J = 7.4 Hz, 1H), 6.77 - 6.71 (m, 1H), 6.61 (br d, J = 7.1 Hz, 1H), 6.57 - 6.51 (m, 1H), 6.23 (br d, J = 7.3 Hz, 1H), 4.82 (br d, J = 7.0 Hz, 1H), 3.85 - 3.75 (m, 6H), 3.73 - 3.70 (m, 1H), 3.34 - 3.20 (m, 4H), 2.93 (s, 3H), 2.80 - 2.77 (m, 6H), 2.59 (br s, 3H), 2.44 - 2.38 (m, 2H), 1.82 - 1.76 (m, 2H), 1.60 - 1.52 (m, 2H), 1.34 (br s, 2H), 1.28 (br d, J = 7.1 Hz, 3H), 1.02 (br t, J = 7.0 Hz, 3H); MW 624.79; LCMS 625.4; HRMS 625.3870
Example 30 (Compound 123) (S,E)-5-((4,4-difluorocyclohexyl)amino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 9.72 - 9.56 (m, 1H), 8.15 - 7.88 (m, 1H), 7.59 (br s, 2H), 7.36 - 7.26 (m, 1H), 7.19 (s, 1H), 6.92 (s, 2H), 6.88 - 6.79 (m, 1H), 6.65 - 6.50 (m, 2H), 4.97 - 4.56 (m, 1H), 4.12 - 4.03 (m, 1H), 3.98 - 3.92 (m, 2H), 3.89 (br d, J = 6.5 Hz, 2H), 3.21 (br s, 2H), 2.95 (s, 2H), 2.80 - 2.73 (m, 7H), 2.67 - 2.61 (m, 2H), 2.19 - 2.00 (m, 6H), 1.84 (br s, 2H), 1.75 - 1.62 (m, 2H), 1.26 (s, 3H), 1.21 - 1.13 (m, 3H); MW 644.77; LCMS 645.4; HRMS 645.3727. Example 31 (Compound 126) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00678] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (280 mg, 523.33 µmol, 1 eq) and 2,4,6-trimethyl-1,3,5,2,4,6-trioxatriborinane (197.09 mg, 785.00 µmol, 219.47 µL, 50% purity, 1.5 eq) in DMA (2.0 mL) and H2O (0.5 mL) was added K2CO3 (216.98 mg, 1.57 mmol, 3 eq) and Pd(dppf)Cl2 (38.29 mg, 52.33 µmol, 0.1 eq) in one portion at 20 °C under N2. The mixture was stirred at 100 °C for 10 hours. LCMS showed the reaction was completed. The reaction mixture was poured into saturated EDTA (50 mL) and EA (20 mL) stirred for 60 min. The aqueous phase was extracted with ethyl acetate (3*20
mL). The combined organic phase was washed with saturated brine (1*50 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give a residue. The residue was purified by prep-TLC (SiO2, PE: EA = 1:1, Rf=0.38) to afford compound tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6- methylpyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate as yellow solid. LC-MS (ES+, m/z): 515.5[(M+H)+]; Rt=0.828 min. Step 2: (S)-6-ethyl-5-methyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)pyrazine-2-carboxamide
[00679] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (110 mg, 181.69 µmol, 85% purity, 1 eq) in MeOH (1 mL) was added HCl/MeOH (4 M, 1 mL) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 1 hour. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to afford compound (S)-6-ethyl-5-methyl-3-((3-(3-(2- (methylamino)propanamido) propoxy)phenyl)amino)pyrazine-2-carboxamide (100 mg, crude) as yellow solid. LC-MS (ES+, m/z): 415.2[(M+H)+]; Rt=0.665 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M) Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00680] To a mixture of (S)-6-ethyl-5-methyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)pyrazine-2-carboxamide (100 mg, 241.25 µmol, N/A purity, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid; hydrochloride (59.93 mg, 361.88 µmol, N/A purity, 1.5 eq) in DMF (1 mL) was added BOP (160.05 mg, 361.88 µmol, 1.5 eq) in one portion at 20 °C under N2. The mixture was stirred at 20 °C for 1 hour. LCMS showed the reaction was completed. The residue was poured into ice- water (15 mL). The aqueous phase was extracted with ethyl acetate (3*15 mL). The combined organic phase was washed with saturated brine (2*10 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give a residue. The residue was purified by prep-HPLC (TFA condition)
(column: Phenomenex Luna 80*30mm*3um; mobile phase: [water(TFA)-ACN];B%: 20%-50%,8min) to afford compound (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (12.78 mg, 24.12 µmol, 10.00% yield, 99.19% purity) as a white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 9.91 - 9.73 (m, 1H), 8.17 (br s, 1H), 8.14 - 7.93 (m, 1H), 7.87 (br s, 1H), 7.49 - 7.44 (m, 1H), 7.23 - 7.12 (m, 2H), 6.83 (br d, J = 15.0 Hz, 1H), 6.63 - 6.49 (m, 2H), 5.01 - 4.56 (m, 1H), 3.98 (br t, J = 6.2 Hz, 2H), 3.91 - 3.82 (m, 2H), 3.28 - 3.18 (m, 2H), 2.96 (s, 2H), 2.79 - 2.72 (m, 9H), 2.52 - 2.51 (m, 3H), 1.92 - 1.83 (m, 2H), 1.32 - 1.22 (m, 6H). 1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 7.18 (br s, 1H), 7.00 - 6.93 (m, 1H), 6.82 - 6.73 (m, 1H), 6.72 - 6.66 (m, 1H), 6.62 - 6.50 (m, 1H), 6.40 - 6.34 (m, 1H), 4.89 - 4.83 (m, 1H), 3.89 - 3.78 (m, 4H), 3.31 (br t, J = 6.4 Hz, 2H), 2.99 (s, 2H), 2.86 - 2.78 (m, 7H), 2.40 (br d, J = 7.3 Hz, 2H), 2.08 (br s, 3H), 1.93 - 1.85 (m, 2H), 1.42 - 1.31 (m, 3H), 1.05 (br t, J = 7.4 Hz, 3H); LC- MS (ES+, m/z): 526.3 [(M+H)+]; Rt=2.103 min, 99.19% purity; HRMS (EI): m/z [M+H]+: 526.3159. [00681] The following compound was prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound (S,E)-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5- methylpyrazine-2-carboxamide (Compound 126): Example 32 ((Compound 117) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6- ethyl-5-(2-fluorophenyl)pyrazine-2-carboxamide
1H NMR (400 MHz, DMSO-d6) δ = 11.227 (s, 1H), 10.23 (s, 1H), 8.44 - 8.34 (m, 1H), 8.21 - 7.86 (m, 2H), 7.64 - 7.56 (m, 2H), 7.48 - 7.44 (m, 1H), 7.43 - 7.37 (m, 2H), 7.20 - 7.15 (m, 1H), 7.12 - 7.07 (m, 1H), 6.89 - 6.83 (m, 1H), 6.57 (br s, 1H), 6.54 (dd, J = 2.0, 7.9 Hz, 1H), 5.01 - 4.58 (m, 1H), 3.90 - 3.80 (m, 4H), 3.22 - 3.13 (m, 2H), 2.98 - 2.93 (m, 2H), 2.77 - 2.72 (m, 7H), 2.62 (q, J = 7.5 Hz, 2H), 1.85 - 1.77 (m, 2H), 1.32 - 1.24 (m, 3H), 1.19 - 1.15 (m, 3H); MW 605.72; LCMS 606.3; HRMS 606.3208.
Example 33 ((Compound 125) (S,E)-5-cyclopropyl-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: (S)-tert-butyl (1-((3-(3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00682] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (280 mg, 519.67 µmol, 99.3% purity, 1 eq) and cyclopropylboronic acid (223.19 mg, 2.60 mmol, 5 eq) in DMA (2.4 mL) and H2O (0.6 mL) was added K2CO3 (215.46 mg, 1.56 mmol, 3 eq) and Pd(dppf)Cl2 (38.02 mg, 51.97 µmol, 0.1 eq) in one portion at 20 °C under N2. The mixture was stirred at 100°C for 10 hours. LCMS showed the reaction was completed. Thee residue was poured into saturated EDTA (20 mL) and EA(20 mL) stirred for 30 min. The aqueous phase was extracted with ethyl acetate (5*5 mL).The dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-TLC (SiO2, PE: EA = 1:1). To afford the title compound (S)-tert-butyl (1-((3-(3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (80 mg, 116.90 µmol, 22.49% yield, 79% purity)as a yellow oil. LC-MS (ES+, m/z): 541.5[(M+H)+]; Rt=0.862min Step 2:(S)-5-cyclopropyl-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00683] To a solution of (S)-tert-butyl (1-((3-(3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (135 mg, 249.70 µmol, 1 eq) a in DCM (0.5 mL) was added TFA (10.40 g, 91.17 mmol, 6.75 mL, 365.10 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 1 hr. LCMS showed 64% of desired compound was detected. The
reaction mixture was washed by DCM (3*10 mL) and concentrated under reduced pressure to give a residue. To afford the title compound (S)-5-cyclopropyl-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (120 mg, crude) as a yellow oil. LC-MS (ES+, m/z): 441.3[(M+H)+]; Rt=0.706 min;. Step 3: (S,E)-5-cyclopropyl-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00684] To a mixture of (S)-5-cyclopropyl-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (120 mg, 272.39 µmol, 1 eq) and (E)-4-(dimethylamino)but-2-enoic acid; hydrochloride (82.57 mg, 408.59 µmol, 1.5 eq, HCl) in DMF (1 mL) was added BOP (180.71 mg, 408.59 µmol, 1.5 eq) and DIPEA (281.64 mg, 2.18 mmol, 379.57 µL, 8 eq) in one portion at 25 °C under N2.The mixture was stirred at 25 °C for 1 hr LCMS showed 66% of desired compound was detected. The residue was poured into ice-water (15 mL). The aqueous phase was extracted with ethyl acetate (3*15 mL).The combined organic phase was washed with brine (2*10 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition).column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)- ACN];B%: 20%-50%,8min. To afford the title compound (S,E)-5-cyclopropyl-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2- carboxamide (11.33 mg, 19.72 µmol, 7.24% yield, 96% purity) as a yellow solid.11H NMR (400 MHz, DMSO-d6) δ = 11.14 (s, 1H), 9.75 - 9.65 (m, 1H), 8.15 (br s, 1H), 7.94 (br s, 1H), 7.83 (br s, 1H), 7.42 - 7.36 (m, 1H), 7.23 - 7.16 (m, 1H), 7.05 - 6.97 (m, 1H), 6.83 (br d, J = 15.1 Hz, 1H), 6.63 (br s, 2H), 4.58 (s, 1H), 4.00 (br t, J = 6.1 Hz, 2H), 3.91 - 3.80 (m, 2H), 3.26 - 3.19 (m, 2H), 2.96 (s, 2H), 2.92 - 2.87 (m, 2H), 2.78 - 2.73 (m, 7H), 2.33 - 2.28 (m, 1H), 1.92 - 1.82 (m, 2H), 1.32 - 1.24 (m, 6H), 1.16 - 1.05 (m, 4H) LC-MS (ES+, m/z): 552.3[(M+H)+]; Rt=2.216 min. HRMS (EI): m/z [M+H]+: 552.3238 Example 36 (Compound 128) [00685] The following compound was prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound 129 (S)-6-ethyl-3-((3-fluoro-5-(3- (2-(N-methylbut-2-ynamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide:
(S)-6-ethyl-3-((3-fluoro-5-(3-(2-(N-methylbut-2-ynamido)propanamido)propoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00686] 1H NMR (400 MHz, DMSO-d6) δ = 11.40 (s, 1H), 8.10 - 7.93 (m, 1H), 7.60 (br s, 1H), 7.42 - 7.31 (m, 1H), 7.28 (br dd, J = 1.5, 11.8 Hz, 1H), 6.96 (br d, J = 7.2 Hz, 1H), 6.92 (s, 1H), 6.49 - 6.29 (m, 1H), 4.90 - 4.81 (m, 1H), 4.15 - 4.03 (m, 1H), 4.02 - 3.89 (m, 4H), 3.46 - 3.44 (m, 2H), 3.29 - 3.14 (m, 2H), 3.08 - 2.72 (m, 3H), 2.63 - 2.56 (m, 2H), 2.04 - 1.96 (m, 3H), 1.93 - 1.80 (m, 4H), 1.66 (dq, J = 4.3, 12.0 Hz, 2H), 1.33 - 1.16 (m, 6H); MW 583.67; LCMS 584.3; HRMS 584.3002 Example 37 (Compound 129) (S,E)-3-((3-(3-(2-(4-(Dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)-5- fluorophenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)-5- fluorophenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00687] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (23.91 mg, 144.40 µmol, 0.78 eq, HCl) in DMF (1 mL) was added DIEA (71.79 mg, 555.48 µmol, 96.75 µL, 3 eq) and BOP (122.84 mg, 277.74 µmol, 1.5 eq) and(S)-6-ethyl-3-((3-fluoro-5-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 185.16 µmol, 1 eq, HCl). The mixture was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL) and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated NaHCO3 (20 mL * 2) and saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%:
20%-50%, 8min) to give (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (58 mg, 78.09 µmol, 42.17% yield, 100% purity, TFA) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.41 (s, 1H), 9.92 - 9.79 (m, 1H), 8.60 - 7.92 (m, 1H), 7.65 - 7.58 (m, 1H), 7.38 - 7.27 (m, 2H), 7.02 - 6.96 (m, 1H), 6.92 - 6.76 (m, 2H), 6.65 - 6.44 (m, 1H), 6.43 - 6.33 (m, 1H), 5.02 - 4.39 (m, 1H), 4.16 - 4.06 (m, 1H), 4.03 - 3.80 (m, 6H), 3.34 (br s, 4H), 3.00 - 2.88 (m, 2H), 2.82 - 2.72 (m, 7H), 2.67 - 2.58 (m, 2H), 1.95 - 1.82 (m, 4H), 1.74 - 1.62 (m, 2H), 1.36 - 1.16 (m, 6H)(TFA salt); LC-MS (ES+, m/z): 629.4 [(M+H)+]; Rt=2.117 min, 100.00% purity. HRMS (EI): m/z [M]+ found: 629.3575. Example 38 (Compound 130) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(3-aminopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00688] A mixture of tert-butyl (3-(3-((3-carbamoyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate (120 mg, 246.63 µmol, 1 eq) and HCl/MeOH (15 mL) was stirred at 25 °C for 2 hours. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give 3-((3-(3-aminopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (88 mg, crude) as yellow solid. LC-MS (ES+, m/z): 387.2 [(M+H)+]. Rt=0.578 min Note: HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M). Step 2: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl) carbamate
[00689] A mixture of 3-((3-(3-aminopropoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (88 mg, 227.72 µmol, 1 eq) and (2S)-2-[tert- butoxycarbonyl(methyl)amino]propanoic acid (69.42 mg, 341.57 µmol, 1.5 eq) in DMF (3 mL) was added BOP (151.07 mg, 341.57 µmol, 1.5 eq) and DIPEA (147.15 mg, 1.14 mmol, 198.32 µL, 5 eq) at 25 °C. The mixture was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed. The reaction was poured into water (20 mL) and extracted with EtOAc (20 mL * 3). The combined organic phase was washed with saturated brine (10 mL * 1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1) TLC( plate1 Rf= 0.46) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-((tetrahydro- 2H-pyran-4-yl)amino)pyrazin-2-yl)amino)phenoxy)propyl) amino)-1-oxopropan-2-yl)(methyl)carbamate (110 mg, 180.87 µmol, 79.43% yield) as yellow solid. LC-MS (ES+, m/z): 572.5 [(M+H)+]. Rt=0.755 min.
Step 3: (S)-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
[00690] A mixture of tert-butyl N-[(1S)-2-[3-[3-[[3-carbamoyl-6-(tetrahydropyran-4-ylamino)pyrazin-2- yl]amino]phenoxy]propylamino]-1-methyl-2-oxo-ethyl]-N-methyl-carbamate (110 mg, 192.42 µmol, 1 eq) in HCl/MeOH (40 mL) was stirred at 25 °C for 1 hour. LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure to give (S)-3-((3-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (80 mg, crude) as yellow solid. LC-MS (ES+, m/z): 472.3 [(M+H)+]. Rt=0.601 min. Step 4: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00691] A mixture of (S)-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (80 mg, 169.65 µmol, 1 eq) and (E)-4- (dimethylamino)but-2-enoic acid (56.19 mg, 339.31 µmol, 2 eq, HCl) in DMF (4 mL) was added BOP (112.55 mg, 254.48 µmol, 1.5 eq) and DIPEA (131.56 mg, 1.02 mmol, 177.30 µL, 6 eq). The mixture was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure. The crude was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um; mobile phase: [water(TFA)-ACN]; B%: 5%-45%, 8 min) to give (S,E)-3-((3-(3-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy) phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (12.16 mg, 20.83 µmol, 12.28% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.48 (s, 1H), 9.70 - 9.58 (m, 1H), 8.13 - 7.92 (m, 1H), 7.79 - 7.70 (m, 2H), 7.54 - 7.47 (m, 1H), 7.35 (s, 1H), 7.27 (br s, 1H), 7.20 (t, J = 8.1 Hz, 1H), 7.08 - 7.00 (m, 1H), 6.88 - 6.80 (m, 1H), 6.65 - 6.50 (m, 2H), 5.02 - 4.56 (m, 1H), 4.00 - 3.91 (m, 5H), 3.49 - 3.45 (m, 4H), 3.27 - 3.22 (m, 2H), 2.97 (s, 2H), 2.80 - 2.74 (m, 7H), 1.99 - 1.93 (m, 2H), 1.91 - 1.83 (m, 2H), 1.56 - 1.45 (m, 2H), 1.33 - 1.25 (m, 3H). 1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 7.33 - 7.20 (m, 1H), 7.14 - 6.98 (m, 2H), 6.86 - 6.64 (m, 2H), 6.50 (quin, J = 7.2 Hz, 2H), 4.88 - 4.77 (m, 1H), 3.87 (br d, J = 8.3 Hz,
4H), 3.80 - 3.62 (m, 1H), 3.73 - 3.59 (m, 2H), 3.45 - 3.37 (m, 2H), 3.35 - 3.24 (m, 2H), 2.94 (s, 2H), 2.84 - 2.67 (m, 7H), 1.92 - 1.80 (m, 4H), 1.49 - 1.34 (m, 3H), 1.30 (br d, J = 7.0 Hz, 2H). LC-MS (ES+, m/z): 583.3 [(M+H)+]. Rt=1.888 min. HRMS (EI): m/z [M]+ found: 583.3352. Example 39 (Compound 131) Scheme 13
(S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-3-methylbutanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S)-6-ethyl-3-((3-methoxy-5-(2-(3-methyl-2-(methylamino)butanamido)ethyl)phenyl)amino)- 5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00692] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (120 mg, 289.51 µmol, 1 eq) methyl-L-valine (75.95 mg, 579.01 µmol, 2 eq) BOP (192.06 mg, 434.26 µmol, 1.5 eq) in DMF (3 mL) at 25 °C, DIPEA (374.17 mg, 2.90 mmol, 504.27 µL, 10 eq) was added. The mixture was stirred at 25°C for 1h. LCMS indicated the reaction was completed. The mixture was poured into water (10 mL) and extracted with EtOAc(5 mL*2). The organic layers was washed with water(5 mL*2), saturated brine(5 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc =1:1 ) to afford (S)-6-ethyl-3-((3-methoxy-5-(2-(3- methyl-2-(methylamino)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-
2-carboxamide (168 mg, crude) as yellow solid. 1H NMR (400 MHz, CDCl3-d) δ = 10.93 - 10.75 (m, 1H), 7.95 (s, 3H), 7.52 - 7.35 (m, 2H), 6.95 - 6.78 (m, 1H), 6.37 - 6.25 (m, 1H), 5.26 - 5.06 (m, 1H), 4.57 (br d, J = 7.6 Hz, 1H), 4.24 - 4.14 (m, 1H), 3.96 (br d, J = 10.9 Hz, 2H), 3.75 - 3.70 (m, 3H), 3.58 - 3.45 (m, 4H), 2.75 - 2.69 (m, 2H), 2.45 (q, J = 7.3 Hz, 2H), 2.30 - 2.19 (m, 3H), 2.17 - 1.83 (m, 5H), 1.24 (t, J = 7.4 Hz, 3H), 0.91 - 0.86 (m, 3H), 0.83 - 0.75 (m, 3H); LC-MS (ES+, m/z): 528.4 [(M-H)-]; Rt=0.675 min. Step 2: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-3-methylbutanamido)ethyl)- 5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00693] To a solution of (S)-6-ethyl-3-((3-methoxy-5-(2-(3-methyl-2- (methylamino)butanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (140 mg, 265.32 µmol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (87.88 mg, 530.65 µmol, 2 eq) BOP (176.02 mg, 397.99 µmol, 1.5 eq) in DMF (3 mL) at 25 °C, DIPEA (411.49 mg, 3.18 mmol, 554.58 µL, 12 eq) was added. The mixture was stirred at 25°C for 1h. LCMS indicated the reaction was completed. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 12%-42%,8min to afford (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-3-methylbutanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (26.20 mg, 40.75 µmol, 15.36% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.24 - 11.20 (m, 1H), 9.73 - 9.56 (m, 1H), 8.22 - 8.10 (m, 1H), 7.62 - 7.57 (m, 1H), 7.32 - 7.25 (m, 2H), 6.90 - 6.79 (m, 3H), 6.65 - 6.51 (m, 1H), 6.40 (s, 1H), 4.67 - 4.53 (m, 1H), 4.18 - 4.10 (m, 1H), 3.95 - 3.85 (m, 4H), 3.77 - 3.74 (m, 3H), 3.43 - 3.40 (m, 2H), 3.27 - 3.16 (m, 2H), 3.03 (s, 2H), 2.85 (s, 1H), 2.78 (s, 6H), 2.73 - 2.68 (m, 2H), 2.60 (d, J = 7.4 Hz, 2H), 2.17 - 2.05 (m, 1H), 1.87 (br d, J = 10.7 Hz, 2H), 1.70 - 1.62 (m, 2H), 1.20 (t, J = 7.4 Hz, 3H), 0.87 - 0.82 (m, 3H), 0.77 - 0.71 (m, 3H); LC-MS (ES+, m/z): 639.4[(M+H)+]; Rt=2.099 min, 99.363% purity; HRMS (EI): m/z [M+H]+ found: 639.3960.
Example 40 (Compound 132) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-(3-((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate
[00694] [0010] To a mixture of tert-butyl (3-(3-((5-bromo-3-carbamoyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)carbamate (250 mg, 442.12 µmol, 1 eq) and 2,4,6-
trimethyl-1,3,5,2,4,6-trioxatriborinane (83.25 mg, 663.18 µmol, 92.71 µL, 1.5 eq) in DMA (2 mL) and H2O (0.5 mL) was added K2CO3 (183.32 mg, 1.33 mmol, 3 eq) and Pd(dppf)Cl2 (32.35 mg, 44.21 µmol, 0.1 eq) at 20 °C under N2. The mixture was stirred at 100 °C for 10 hours. LCMS indicated the reaction was completed. The residue was poured into saturated EDTA (10 mL) and EA (10 mL) stirred for 60 min. The reaction was poured into water (10 mL) and extracted with EtOAc (5 mL * 2). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The mixture was concentrated under reduced pressure to give tert-butyl (3-(3- ((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate (150 mg, crude) as yellow solid. LC-MS (ES+, m/z): 501.3 [(M+H)+]. Rt=0.826 min Step 2: 3-((3-(3-aminopropoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00695] [0011] A mixture of tert-butyl (3-(3-((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)carbamate (150 mg, 299.65 µmol, 1 eq) and HCl/MeOH (20 mL) was stirred at 25 °C for 1 hour. LCMS indicated the reaction was complete. The mixture was added Tol. (30 mL) and concentrated under reduced pressure to give 3-((3-(3- aminopropoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, crude) as yellow solid. LC-MS (ES+, m/z): 401.2 [(M+H)+]. Rt=0.603 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 3: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00696] A mixture of 3-((3-(3-aminopropoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (100 mg, 249.70 µmol, 1 eq), N-(tert-butoxycarbonyl)-N-methyl-L- alanine (76.12 mg, 374.56 µmol, 1.5 eq), BOP (165.66 mg, 374.56 µmol, 1.5 eq) and DIPEA (161.36 mg, 1.25 mmol, 217.47 µL, 5 eq) in DMF (3 mL) was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed. The reaction was poured into water (5 mL) and extracted with EtOAc (3 mL *2).
The combined organic phase was washed with saturated brine (5 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1) TLC( plate1 Rf= 0.60) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5- methyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl) carbamate (140 mg, 239.03 µmol, 95.73% yield) as yellow solid. LC-MS (ES+, m/z): 586.4 [(M+H)+]. Rt=0.782 min Step 4: (S)-6-methyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00697] A mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-methyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (140 mg, 239.03 µmol, 1 eq) and HCl/MeOH (239.03 µmol, 20 mL, 1 eq) was stirred at 25 °C for 1 hour. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give (S)-6- methyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (100 mg, crude) as yellow solid. LC-MS (ES+, m/z): 486.3 [(M+H)+]. Rt=0.612 min Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 5: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00698] A mixture of (S)-6-methyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 205.94 µmol, 1 eq), (E)-4- (dimethylamino)but-2-enoic acid (68.21 mg, 411.88 µmol, 2 eq, HCl), BOP (136.63 mg, 308.91 µmol, 1.5 eq) and DIPEA (159.70 mg, 1.24 mmol, 215.23 µL, 6 eq) in DMF (4 mL) was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed . The crude was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 15%-45%, 8min) to
give (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide (11.69 mg, 19.59 µmol, 9.51% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 9.76 - 9.47 (m, 1H), 8.15 - 7.90 (m, 1H), 7.66 (br s, 1H), 7.52 - 7.44 (m, 1H), 7.33 - 7.22 (m, 1H), 7.19 (t, J = 8.1 Hz, 1H), 7.06 - 6.98 (m, 1H), 6.92 - 6.77 (m, 2H), 6.66 - 6.47 (m, 2H), 5.01 - 4.56 (m, 1H), 4.19 - 4.03 (m, 2H), 4.01 - 3.92 (m, 5H), 3.46 (br t, J = 11.4 Hz, 2H), 3.29 - 3.20 (m, 2H), 2.97 (s, 2H), 2.87 - 2.69 (m, 7H), 2.28 (s, 3H), 1.95 - 1.83 (m, 4H), 1.66 (dq, J = 4.2, 12.0 Hz, 2H), 1.34 - 1.25 (m, 3H); 1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 7.26 - 7.13 (m, 1H), 7.09 - 6.97 (m, 1H), 6.77 - 6.65 (m, 2H), 6.59 - 6.37 (m, 2H), 4.88 - 4.80 (m, 1H), 3.88 - 3.79 (m, 4H), 3.79 - 3.65 (m, 3H), 3.40 - 3.26 (m, 4H), 2.94 (s, 2H), 2.82 (br s, 7H), 2.08 - 1.99 (m, 3H), 1.91 - 1.74 (m, 4H), 1.45 - 1.28 (m, 5H). LC-MS (ES+, m/z): 597.4[(M+H)+]; Rt=1.958 min; HRMS (EI): m/z [M]+ found:597.3530. Example 41(Compound 133) (S,E)-6-cyclopropyl-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-(3-((3-carbamoyl-5-cyclopropyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl)carbamate
[00699] To a mixture of tert-butyl (3-(3-((5-bromo-3-carbamoyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)carbamate (270 mg, 477.49 µmol, 1 eq) and cyclopropylboronic acid (410.15 mg, 4.77 mmol, 10 eq) in DMA (2 mL) and H2O (0.5 mL) was added K2CO3 (197.98 mg, 1.43 mmol, 3 eq) and Pd(dppf)Cl2 (34.94 mg, 47.75 µmol, 0.1 eq) at 20 °C under N2. The mixture was stirred at 100 °C for 10 hours. LCMS indicated the reaction was completed. The residue was poured into saturated EDTA (50 mL) and EA (50 mL) stirred for 60 min. The reaction was poured into water (20 mL) and extracted with EtOAc (20 mL * 3). The combined organic phase was washed with saturated brine (20 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give tert- butyl (3-(3-((3-carbamoyl-5-cyclopropyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenoxy)propyl) carbamate (200 mg, crude) as yellow solid. LC-MS (ES+, m/z): 527.3 [(M+H)+]. Rt=0.851 min.
Step 2: 3-((3-(3-aminopropoxy)phenyl)amino)-6-cyclopropyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00700] To a solution of tert-butyl N-[3-[3-[[3-carbamoyl-5-cyclopropyl-6-(tetrahydropyran-4- ylamino)pyrazin-2-yl]amino]phenoxy]propyl]carbamate (200 mg, 379.78 µmol, 1 eq) in DCM (10 mL) was added TFA (15.40 g, 135.06 mmol, 10 mL, 355.63 eq). The mixture was stirred at 25 °C for 1 hour. LCMS indicated the reaction was completed. The reaction mixture was washed by DCM (10 mL * 3) and concentrated under reduced pressure to give 3-((3-(3-aminopropoxy)phenyl)amino)-6-cyclopropyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (330 mg, crude) as yellow solid. LC-MS (ES+, m/z): 427.3 [(M+H)+]. Rt=0.634 min Step 3: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-cyclopropyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00701] A mixture of 3-((3-(3-aminopropoxy)phenyl)amino)-6-cyclopropyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (330 mg, 773.72 µmol, 1 eq) and N-(tert-butoxycarbonyl)-N-methyl-L- alanine (235.87 mg, 1.16 mmol, 1.5 eq) in DMF (5 mL) was added BOP (513.30 mg, 1.16 mmol, 1.5 eq) and DIPEA (999.98 mg, 7.74 mmol, 10 eq). The mixture was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed. The reaction was poured into water (20 mL) and extracted with EtOAc (20 mL * 3). The combined organic phase was washed with saturated brine (10 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5- cyclopropyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1- oxopropan-2-yl)(methyl) carbamate (310 mg, crude) as yellow solid. LC-MS (ES+, m/z): 612.6 [(M+H)+]. Rt=0.806 min. Step 4: (S)-6-cyclopropyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl) amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00702] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-cyclopropyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (310 mg, 427.14 µmol, 1 eq, TFA) in DCM(10 mL) was added TFA (15.40 g, 135.06 mmol, 10 mL, 316.20 eq). The mixture was stirred at 25 °C for 1 hour. LCMS indicated the reaction was complete. The reaction mixture was washed by DCM (10 mL * 3) and concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/2) to give (S)-6-cyclopropyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (450 mg, 879.57 µmol) as yellow solid. LC-MS (ES+, m/z): 512.3 [(M+H)+]. Rt=0.654 min. Step 5: (S,E)-6-cyclopropyl-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00703] To a mixture of (S)-6-cyclopropyl-3-((3-(3-(2-(methylamino)propanamido) propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (440 mg, 703.28 µmol, 1 eq, TFA) and (E)-4-(dimethylamino)but-2-enoic acid (232.95 mg, 1.41 mmol, 2 eq, HCl) in DMF (5 mL) was added BOP (466.57 mg, 1.05 mmol, 1.5 eq) and DIPEA (908.94 mg, 7.03 mmol, 1.22 mL, 10 eq). The mixture was stirred at 25 °C for 10 hours. LCMS indicated the reaction was completed. After filtering to give filtrate, the crude was purified by prep-HPLC (column: Phenomenex Luna C18 150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 15%-45%, 8min) to give (S,E)-6-cyclopropyl- 3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino) pyrazine-2-carboxamide (12.12 mg, 19.46 µmol, 2.77% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.27 (s, 1H), 9.79 - 8.70 (m, 1H), 8.58 - 7.94 (m, 1H), 7.56 - 7.46 (m, 2H), 7.24 (br s, 1H), 7.20 - 7.13 (m, 2H), 7.01 (br t, J = 8.9 Hz, 1H), 6.89 - 6.70 (m, 1H), 6.65 - 6.50 (m, 2H), 5.04 - 4.54 (m, 1H), 4.22 - 3.99 (m, 2H), 3.99 - 3.89 (m, 5H), 3.50 - 3.47 (m, 2H), 3.28 - 3.21 (m, 2H), 2.97 (s, 2H), 2.89 - 2.69 (m, 7H), 2.16 - 2.11 (m, 1H), 1.95 - 1.85 (m, 4H), 1.73 - 1.65 (m, 2H), 1.38 - 1.25 (m, 3H), 0.96 - 0.93 (m, 2H), 0.87 - 0.83 (m, 2H); 1H NMR (400 MHz, DEUTERIUM OXIDE) δ = 7.19 (s, 1H), 7.02 - 6.94 (m, 1H), 6.76 - 6.62 (m, 2H), 6.56 - 6.34 (m, 2H), 4.87 - 4.80 (m, 1H), 3.86 - 3.80 (m, 4H), 3.78 - 3.64 (m, 3H), 3.42 - 3.35 (m, 2H), 3.34 - 3.25 (m, 2H), 2.94 (s, 2H), 2.84 - 2.58 (m, 7H), 1.88 - 1.77 (m, 4H), 1.63 - 1.55 (m, 1H), 1.46 - 1.36 (m, 3H), 1.33 - 1.27 (m, 2H), 0.83 - 0.77 (m, 2H), 0.72 - 0.66 (m, 2H). LC-MS (ES+, m/z): 623.4[(M+H)+]; Rt=2.056 min; HRMS (EI): m/z [M]+ found: 623.3692.
Example 42 (Compound 134) S,E)-3-((3-(3-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-6- ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(3-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00704] To a mixture of (S,E)-3-((3-(3-(2-(4-bromo-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (160 mg, 247.46 µmol, 1 eq) and azetidine hydrochloride (23.15 mg, 247.46 µmol, 1 eq) in DMF (2 mL) was added DIPEA (95.95 mg, 742.37 µmol, 129.31 µL, 3.00 eq) at 25 °C and stirred at 25 °C for 12 hrs. LCMS indicated the reaction was completed. The mixture was concentrated and then purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 10%-40%, 8min ) to give (S,E)-3-((3-(3-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy) phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (10.24 mg, 16.37 µmol, 6.62% yield) as yellow solid. 1H NMR (400 MHz, DMSO d6) δ = 11.27 - 11.22 (m, 1H), 9.95 - 9.86 (m, 1H), 8.09 (br s, 1H), 7.58 (br s, 1H), 7.50 - 7.44 (m, 1H), 7.28 (br s, 1H), 7.21 - 7.15 (m, 1H), 7.05 - 6.98 (m, 1H), 6.90 (br d, J = 7.3 Hz, 1H), 6.79 - 6.71 (m, 1H), 6.74-6.51 (m, 2H), 5.01 - 4.56 (m, 1H), 4.17 - 3.90 (m, 10H), 3.48 - 3.42 (m, 2H), 3.26 - 3.19 (m, 2H), 2.98 - 2.72 (m, 4H), 2.59 (d, J = 7.4 Hz, 2H), 2.41 - 2.31 (m, 2H), 1.93 - 1.81 (m, 4H), 1.71 - 1.59 (m, 2H), 1.31 - 1.17 (m, 6H) (TFA salt); LC-MS (ES+, m/z): 623.4 [(M+H)+]; Rt=2.060 min, 99.58% purity. HRMS (EI): m/z [M]+ found: 623.3664.
Example 43 (Compound 135) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(cyanomethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00705] A mixture of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (4.4 g, 15.45 mmol, 1.0 eq), 2-(3-aminophenyl)acetonitrile (4.08 g, 30.91 mmol, 2.0 eq) in tert-amyl alcohol (5 mL), Cs2CO3 (22.66 g, 69.54 mmol, 4.5 eq), BrettPhos (829.45 mg, 1.55 mmol, 0.1 eq) and BrettPhos Pd G3 (1.40 g, 1.55 mmol, 0.1 eq) was added at 25 °C. The mixture was stirred at 120 °C for 10 hours under N2. LCMS showed the reaction was completed. The residue was poured into saturated EDTA (50 mL), EA (50 mL) and stirred for 60 min. The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (200 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford 3-((3-(cyanomethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide (1.7 g, 4.47 mmol, 28.92% yield) as a white solid. LC-MS (ES+, m/z): 381.2 [(M+H)+]; Rt=5.622 min.
Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00706] The mixture of 3-((3-(cyanomethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (500 mg, 1.31 mmol, 1.0 eq), and NH3.H2O (460.59 mg, 13.14 mmol, 10.0 eq) in THF (10 mL), and then added Raney-Ni (112.60 mg, 1.31 mmol, 1.0 eq). The mixture was stirred at 25°C for 4 hours under H2(50PSI). LCMS showed the reaction was completed. Filtered and concentrated in vacuum to afford 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (440 mg, crude) as a white solid. LC-MS (ES+, m/z): 385.3 [(M+H)+]; Rt=0.608 min. Step 3: tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00707] A mixture of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (420 mg, 1.09 mmol, 1.0 eq), N-(tert-butoxycarbonyl)-N-methyl-L- alanine (266.42 mg, 1.31 mmol, 1.2 eq), DIPEA (1.13 g, 8.74 mmol, 8.0 eq) and BOP (724.72 mg, 1.64 mmol, 1.5 eq) in DMF (4 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 1 hr under N2 atmosphere. LCMS showed the reaction was completed. The reaction was poured into H2O (10 mL). The aqueous phase was extracted with ethyl acetate (5 mL*3). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (530 mg, 930.32 µmol, 85.16% yield) as a yellow solid. LC-MS (ES+, m/z):570.5 [(M+H)+]; Rt=0.823 min.
Step 4: (S)-6-ethyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
[00708] To a mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (300 mg, 526.60 µmol, 1.0 eq) in HCl/MeOH (4 M, 15 mL, 113.94 eq) at 25 °C. The mixture was stirred at 25 °C for 1 hour. LCMS showed the reaction was completed. Filtered and concentrated in vacuum to afford (S)-6- ethyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (230 mg, 489.80 µmol, 93.01% yield) as a yellow oil. LC-MS (ES+, m/z): 470.3 [(M+H)+]; Rt=0.644 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M) Step 5: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine- 2-carboxamide
[00709] A mixture of (S)-6-ethyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (250 mg, 532.39 µmol, 1.0 eq), (E)-4- (dimethylamino)but-2-enoic acid (82.51 mg, 638.87 µmol, 1.2 eq), BOP (353.20 mg, 798.59 µmol, 1.5 eq) and DIEA (550.46 mg, 4.26 mmol, 8.0 eq) in DMF (3 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 25 °C for 2 hours under N2 atmosphere. LCMS showed the reaction was completed. The reaction was poured into H2O (10 mL). The aqueous phase was extracted with ethyl acetate (5 mL*3). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by prep- HPLC (column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min) to afford (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl- 5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (140 mg, 241.08 µmol, 45.28% yield,) as a
white solid. 1H NMR (400 MHz, DMSO-d6, TFA) δ= 11.21 (s, 1H), 9.69 (br d, J = 1.1 Hz, 1H), 7.91 (t, J = 5.4 Hz, 1H), 7.56 - 7.51 (m, 2H), 7.42 - 7.36 (m, 1H), 7.27 (br s, 1H), 7.23 - 7.16 (m, 1H), 6.86 - 6.75 (m, 3H), 6.64 - 6.44 (m, 1H), 4.96 - 4.55 (br d, J = 7.0 Hz, 1H), 4.17 - 4.05 (m, 1H), 3.96 - 3.81 (br d, J = 6.5 Hz, 4H), 3.42 - 3.39 (m, 2H), 3.36 - 3.35 (m, 2H), 3.30 - 3.25 (m, 2H), 2.77 (s, 6H), 2.73 - 2.66 (m, 3H), 2.62 - 2.56 (m, 2H), 1.90 - 1.83 (m, 2H), 1.72 - 1.58 (m, 2H), 1.30 - 1.24 (m, 1H), 1.22 - 1.16 (m, 5H); LC-MS (ES+, m/z): 581.4 [(M+H)+]; Rt=2.004 min; HRMS:581.3587. Example 44 (Compound 136) (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-ynamido)propanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-ynamido) propanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00710] To a solution of N-(4-(dimethylamino)but-2-ynoyl)-N-methyl-L-alanine compound with 2,2,2- trifluoroacetaldehyde (1:1) (100 mg, 241.25 µmol, 1 eq) 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)- 6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino) pyrazine-2-carboxamide (118.07 mg, 361.88 µmol, 1.5 eq, TFA) in DMF (2.5 mL) was added BOP (160.05 mg, 361.88 µmol, 1.5 eq) and DIPEA (311.80 mg, 2.41 mmol, 420.22 µL, 10 eq).The mixture was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The crude was purified by prep-HPLC column: Phenomenex C1875*30mm*3um;mobile phase: [water( NH4HCO3)-ACN];B%: 35%-65%,8min. to afford compound (S)-3-((3-(2-(2-(4-(dimethylamino)-N- methylbut-2-ynamido)propanamido)ethyl)-5-methoxyphenyl) amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (25.26 mg, 41.50 µmol, 17.20% yield) as yellow solid. 1H NMR (400
MHz, DMSO-d6) δ = 11.24 (s, 1H), 8.12 - 7.94 (m, 1H), 7.57 (br s, 1H), 7.29 (br s, 2H), 6.91 - 6.79 (m, 2H), 6.40 (s, 1H), 4.87 (qd, J = 7.2, 18.4 Hz, 1H), 4.18 - 4.09 (m, 1H), 3.92 (br d, J = 8.8 Hz, 2H), 3.76 (s, 3H), 3.47 - 3.37 (m, 4H), 3.27 (br s, 2H), 2.76 (m, 5H), 2.63 - 2.57 (m, 2H), 2.23 - 2.14 (m, 6H), 1.88 (br d, J = 10.5 Hz, 2H), 1.66 (dq, J = 4.4, 11.9 Hz, 2H), 1.35 - 1.18 (m, 6H). LC-MS (ES+, m/z): 609.4 [(M+H)+]; Rt=2.038 min; HRMS (EI): m/z [M]+ found:609.3517; SFC:100%. Example 45 (Compound 137) (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00711] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (600 mg, 1.19 mmol, 1 eq) Me2NH (968.83 mg, 11.88 mmol, 10 eq, HCl) in DMA (6 mL) at 25°C, DIPEA (1.54 g, 11.88 mmol, 10 eq) was added. The mixture was stirred at 100°C for 10 hrs. LCMS indicated the reaction was completed. The mixture was poured into water (20 mL) and extracted with EtOAc(15 mL*2). The organic layers was washed with water(15 mL*2), saturated brine(15 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 35%-80%,8min to afford tert-butyl N- [(1S)-2-[2-[3-[[3-carbamoyl-6-(dimethylamino)-5-ethyl-pyrazin-2-yl]amino]phenyl]ethylamino]-1- methyl-2-oxo-ethyl]-N-methyl-carbamate (251 mg, 449.58 µmol, 37.84% yield) as brown solid.1H NMR (400 MHz, CDCl3-d) δ = 10.67 (s, 1H), 7.65 - 7.39 (m, 4H), 7.17 - 7.12 (m, 2H), 6.74 - 6.71 (m, 1H), 4.17 - 3.94 (m, 1H), 3.51 - 3.39 (m, 2H), 3.03 (s, 6H), 2.72 - 2.68 (m, 4H), 2.60 (s, 3H), 1.34 (s, 9H), 1.24 (br d, J = 7.1 Hz, 3H), 1.21 - 1.19 (m, 3H); LC-MS (ES+, m/z): 514.3[(M+H)+]; Rt=0.872 min;
Step 2: (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00712] The mixture tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (251 mg, 488.68 µmol, 1 eq) and HCl/MeOH (4 M, 50 mL, 409.27 eq) was stirred at 25°C for 2h. LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure to afford (S)-5-(dimethylamino)-6- ethyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (230 mg, crude) as brown solid. LC-MS (ES+, m/z): 414.3[(M+H)+]; Rt=0.684 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M) Step 3: (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00713] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (230 mg, 556.21 µmol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (138.18 mg, 834.31 µmol, 1.5 eq), BOP (369.00 mg, 834.31 µmol, 1.5 eq) in DMF (4 mL) at 25 °C, DIPEA (718.86 mg, 5.56 mmol, 10 eq) was added. The mixture was stirred at 25 °C for 1h. LCMS indicated the reaction was completed. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min to afford (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2- carboxamide (155.89 mg, 293.50 µmol, 52.77% yield, 98.78% purity) as brown solid.1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.15 - 11.07 (m, 1H), 9.76 - 9.63 (m, 1H), 8.10 - 7.85 (m, 1H), 7.76 (br d, J = 2.5 Hz, 1H), 7.58 - 7.40 (m, 3H), 7.25 - 7.17 (m, 1H), 6.86 - 6.76 (m, 2H), 6.64 - 6.46 (m, 1H), 5.01 - 4.51 (m, 1H), 3.95 - 3.78 (m, 2H), 3.32 - 3.26 (m, 2H), 3.07 (s, 6H), 2.90 (s, 2H), 2.80 - 2.67 (m, 11H), 1.30 - 1.21 (m, 6H); LC-MS (ES+, m/z): 525.3[(M+H)+]; Rt=2.099 min;98.777% purity; HRMS (EI): m/z [M+H]+ found: 525.3279.
Example 46 (Compound 138) Scheme 16
(S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00714] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (600 mg, 1.19 mmol, 1 eq) cyclopropylboronic acid (1.02 g, 11.88 mmol, 10 eq) K2CO3 (492.61 mg, 3.56 mmol, 3 eq) in DMA (4 mL) and H2O (2 mL) at 25°C, Pd(dppf)Cl2 (86.93 mg, 118.81 µmol, 0.1 eq) was added. The mixture was stirred at 100°C for 10 hrs. LCMS indicated the reaction was completed. The mixture was poured into saturated EDTA (10 mL), EA (5 mL) and extracted with EtOAc (5 mL*2). The organic layers was washed with water (10 mL*2), saturated brine (10 mL*2), dried over anhydrous Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 35%-80%,8min to afford tert-butyl(S)-(1- ((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino) phenethyl)amino)-1-oxopropan-2-
yl)(methyl)carbamate (338 mg, 661.93 µmol, 55.71% yield) as yellow solid. 1H NMR (400 MHz, CDCl3- d) δ = 10.61 - 10.54 (m, 1H), 7.86 - 7.75 (m, 1H), 7.48 - 7.40 (m, 2H), 7.19 - 7.13 (m, 1H), 6.76 - 6.73 (m, 1H), 6.18 - 5.88 (m, 1H), 5.58 - 5.41 (m, 1H), 4.10 - 4.00 (m, 1H), 3.58 - 3.41 (m, 2H), 2.84 (q, J = 7.5 Hz, 2H), 2.77 - 2.69 (m, 2H), 2.65 - 2.57 (m, 3H), 2.12 - 2.06 (m, 1H), 1.36 - 1.32 (m, 9H), 1.25 - 1.17 (m, 6H), 1.17 - 1.11 (m, 2H), 1.06 - 1.00 (m, 2H); LC-MS (ES+, m/z): 511.3[(M+H)+]; Rt=0.924 min. Step 2: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00715] The mixture tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (338 mg, 661.93 µmol, 1 eq) and HCl/MeOH (4 M, 50 mL, 302.15 eq) was stirred at 25°C for 2 hrs. LCMS indicated the reaction was completed. The mixture was concentrated under reduced pressure to afford (S)-5-cyclopropyl-6-ethyl-3- ((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (300 mg, crude) as yellow solid. LC-MS (ES+, m/z): 411.3[(M+H)+]; Rt=0.707 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M) Step 3: (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00716] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (300 mg, 730.80 µmol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (181.55 mg, 1.10 mmol, 1.5 eq) BOP (484.83 mg, 1.10 mmol, 1.5 eq) in DMF (4 mL) at 25°C, DIPEA (944.50 mg, 7.31 mmol, 10 eq) was added. The mixture was stirred at 25°C for 1h. LCMS indicated the reaction was completed. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)- ACN];B%: 5%-50%,8min to afford (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide (207.25 mg, 395.71 µmol, 54.15% yield, 99.60% purity) as yellow solid. 1H NMR (400 MHz, D2O) δ = 7.39 - 7.30 (m, 1H), 7.12 - 7.05 (m, 2H), 6.78 - 6.72 (m, 1H), 6.66 - 6.56 (m, 1H), 6.51 - 6.40 (m, 1H), 4.86 - 4.75 (m, 1H), 3.74 -
3.62 (m, 2H), 3.49 - 3.29 (m, 2H), 2.79 - 2.60 (m, 13H), 2.14 - 2.06 (m, 1H), 1.28 - 1.13 (m, 6H), 1.03 - 0.97 (m, 2H), 0.90 (br s, 2H); 1H NMR (400 MHz, DMSO-d6) δ = 11.10 - 11.00 (m, 1H), 9.74 - 9.59 (m, 1H), 8.21 - 8.12 (m, 1H), 8.07 (br s, 1H), 7.87 - 7.79 (m, 1H), 7.50 - 7.40 (m, 2H), 7.27 - 7.19 (m, 1H), 6.88 - 6.77 (m, 2H), 6.65 - 6.45 (m, 1H), 5.01 - 4.53 (m, 1H), 3.92 - 3.81 (m, 2H), 3.32 - 3.27 (m, 2H), 2.95 - 2.87 (m, 5H), 2.80 - 2.76 (m, 6H), 2.70 (br s, 2H), 2.35 - 2.31 (m, 1H), 1.31 - 1.20 (m, 6H), 1.14 - 1.05 (m, 4H); LC-MS (ES+, m/z): 522.3[(M+H)+]; Rt=2.171 min; HRMS (EI): m/z [M+H]+ found: 522.3166. Example 47 (Compound 139) (S,E)-6-Ethyl-3-((3-(3-(2-(4-(3-fluoroazetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
Step 1: (S,E)-6-Ethyl-3-((3-(3-(2-(4-(3-fluoroazetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00717] To a mixture of (S,E)-3-((3-(3-(2-(4-bromo-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (100 mg, 154.66 µmol, 1 eq) and 3-fluoroazetidine hydrochloride (69.01 mg, 618.65 µmol, 4 eq) in NMP (1.5 mL) was added K2CO3 (53.44 mg, 386.65 µmol, 2.5 eq) and KI (51.35 mg, 309.32 µmol, 2 eq) at 20 °C under N2. The mixture was stirred at 40 °C for 12 hrs. LCMS indicated the reaction was completed. The mixture was filtered. The filtrate was concentrated. The crude was purified by prep-HPLC (column: Waters Xbridge Prep OBD C18150*40mm*10um;mobile phase: [water( NH4HCO3)- MeCN];B%: 25%-55%,8min) to give (S,E)-6-ethyl-3-((3-(3-(2-(4-(3-fluoroazetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide (10.83 mg, 16.42 µmol, 10.61% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.28 - 11.19 (m, 1H), 8.11 - 7.85 (m, 1H), 7.61 - 7.54 (m, 1H), 7.48 (br s, 1H), 7.28 (br d, J = 2.5 Hz,
1H), 7.21 - 7.13 (m, 1H), 6.99 (dd, J = 1.5, 8.0 Hz, 1H), 6.88 (br d, J = 7.5 Hz, 1H), 6.58 - 6.41 (m, 3H), 5.27 - 5.05 (m, 1H), 4.96 - 4.53 (m, 1H), 4.16 - 4.08 (m, 1H), 3.99 - 3.90 (m, 4H), 3.45 (br t, J = 11.2 Hz, 4H), 3.24 - 3.19 (m, 3H), 2.91 (s, 2H), 2.76 - 2.66 (m, 6H), 1.94 - 1.81 (m, 4H), 1.65 (dq, J = 4.3, 12.1 Hz, 2H), 1.31 - 1.16 (m, 6H); LC-MS (ES+, m/z): 641.4 [(M+H)+]; Rt=2.073 min, 97.14% purity. HRMS (EI): m/z [M]+ found: 641.3563 Example 48 (Compound 140) (S,E)-3-((3-(3-(2-((4-(dimethylamino)-4-oxobut-2-en-1- yl)(methyl)amino)propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(3-(2-((4-(Dimethylamino)-4-oxobut-2-en-1-yl)(methyl)amino) propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00718] To a mixture of (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alanine (155.07 mg, 144.75 µmol, 3 eq) and 3-((3-(3-aminopropoxy)phenyl) amino)-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide (20 mg, 48.25 µmol, 1 eq) in DMF (1 mL) was added HOBt (13.04 mg, 96.50 µmol, 2 eq) and DIPEA (62.36 mg, 482.51 µmol, 10 eq) finally added EDCI (18.50 mg, 96.50 µmol, 2 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 10 hours. LCMS showed the reaction was completed. The residue was poured into water (20 mL) and extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex Luna C1875*30mm*3um; mobile phase: [water(FA)-ACN]; B%: 1%-40%, 8min) to give (S,E)-3-((3-(3-(2-((4-(dimethylamino)-4-oxobut-2-en-1-yl)(methyl)amino)propanamido)
propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (10.74 mg, 17.41 µmol, 36.08% yield) was obtained as a white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.26 - 11.22 (m, 1H), 8.19 - 8.17 (m, 1H), 7.95 (t, J = 5.8 Hz, 1H), 7.60 - 7.54 (m, 1H), 7.51 - 7.47 (m, 1H), 7.32 - 7.25 (m, 1H), 7.21 - 7.14 (m, 1H), 7.02 - 6.96 (m, 1H), 6.91 - 6.86 (m, 1H), 6.65 - 6.48 (m, 3H), 4.18 - 4.08 (m, 1H), 3.99 - 3.91 (m, 4H), 3.49 - 3.42 (m, 2H), 3.27 - 3.20 (m, 2H), 3.18 - 3.08 (m, 3H), 3.00 (s, 3H), 2.87 - 2.82 (m, 3H), 2.62 - 2.55 (m, 2H), 2.16 - 2.13 (m, 3H), 1.93 - 1.84 (m, 4H), 1.71 - 1.58 (m, 2H), 1.19 (t, J = 7.3 Hz, 3H), 1.08 (d, J = 6.9 Hz, 3H)(FA ,salt). LC-MS (ES+, m/z): 611.5[(M+H)+]. Rt=0.682 min, 99% purity; HRMS (EI): m/z [M]+ found:611.3677. Example 49 (Compound 141) (S,E)-5-(diethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-(diethylamino)-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00719] [0012] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 934.52 µmol, 1 eq) in DMA (8 mL) was added DIPEA (1.21 g, 9.35 mmol, 1.63 mL, 10 eq) and N-ethylethanamine (683.47 mg, 9.35 mmol, 962.64 µL, 10 eq). The mixture was stirred at 100 °C for 3 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with Saturated NaHCO3 (20 mL * 2) and saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-(diethylamino)-5- ethylpyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (380 mg, 584.58 µmol, 62.55% yield, 87.95% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.17 - 11.14
(m, 1H), 7.88 - 7.84 (m, 1H), 7.74 (br s, 1H), 7.46 (br d, J = 2.1 Hz, 1H), 7.40 - 7.37 (m, 1H), 7.20 - 7.15 (m, 1H), 7.05 - 7.01 (m, 1H), 6.53 (dd, J = 1.9, 7.9 Hz, 1H), 4.55 - 4.23 (m, 1H), 3.97 (br t, J = 6.1 Hz, 2H), 3.49 - 3.43 (m, 4H), 2.95 (s, 3H), 2.79 (s, 4H), 2.73 (s, 4H), 1.96 (s, 2H), 1.36 (br s, 9H), 1.25 (br s, 3H), 1.21 (br s, 3H), 1.19 - 1.15 (m, 6H). LC-MS (ES+, m/z): 572.5[(M+H)+]. Rt=0.893min. Step 2: (S)-5-(diethylamino)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00720] To (S)-tert-butyl (1-((3-(3-((3-carbamoyl-6-(diethylamino)-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (300 mg, 524.74 µmol, 1 eq) was added HCl/MeOH (30 mL, 4 M). The mixture was stirred at 25 °C for 1 h. LCMS showed the reaction was completed. The precipitate was collected by filtration to give the crude product. The crude product was triturated with EtOAc (50mL) at 25 oC for 10 min to give (S)-5-(diethylamino)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (270 mg, 465.86 µmol, 88.78% yield, 87.66% purity, HCl) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.18 - 11.12 (m, 1H), 9.21 - 9.09 (m, 1H), 8.89 - 8.78 (m, 1H), 8.70 - 8.64 (m, 1H), 7.38 - 7.34 (m, 1H), 7.21 - 7.15 (m, 1H), 7.11 - 7.06 (m, 1H), 6.56 - 6.52 (m, 1H), 3.73 (br d, J = 5.5 Hz, 1H), 3.46 (q, J = 6.9 Hz, 4H), 3.33 - 3.28 (m, 2H), 3.17 (s, 2H), 2.95 - 2.78 (m, 1H), 2.73 - 2.66 (m, 3H), 1.94 - 1.87 (m, 2H), 1.38 (s, 2H), 1.36 - 1.13 (m, 12H). LC-MS (ES+, m/z): 472.5[(M+H)+]. Rt=0.744 min Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step3: (S,E)-5-(diethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00721] To a solution of (S)-5-(diethylamino)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (270 mg, 572.53 µmol, 1 eq) in DMF (3 mL) was added DIPEA (739.93 mg, 5.73 mmol, 997.21 µL, 10 eq) and BOP (379.83 mg, 858.79 µmol, 1.5 eq) and (E)-4-(dimethylamino)but-2-enoic acid (110.92 mg, 858.79 µmol, 1.5 eq). The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated NaHCO3 (20 mL * 2) and saturated brine (20 mL *
2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water (TFA)- ACN]; B%: 15%-45%, 8 min) to give (S,E)-5-(diethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N- methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide (73.45 mg, 125.59 µmol, 21.94% yield, 99.64% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.20 - 11.11 (m, 1H), 9.96 (br s, 1H), 8.18 - 7.91 (m, 1H), 7.75 (br s, 1H), 7.47 (br s, 1H), 7.39 - 7.31 (m, 1H), 7.20 - 7.03 (m, 2H), 6.84 (d, J = 15.1 Hz, 1H), 6.63 - 6.49 (m, 2H), 5.03 - 4.77 (m, 1H), 3.99 - 3.43 (m, 9H), 3.27 - 3.18 (m, 2H), 2.97 - 2.75 (m, 8H), 2.69 (d, J = 7.4 Hz, 2H), 1.89 - 1.80 (m, 2H), 1.31 - 1.20 (m, 6H), 1.16 (t, J = 7.0 Hz, 6H) ; LC-MS (ES+, m/z): 292.3[(M/2+H)+]; Rt=2.285 min ; HRMS (EI): m/z [M+H]+: 583.3702. Example 50 (Compound 142) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) propoxy)phenyl)amino)-6-ethyl-5-(pyrrolidin-1-yl)pyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(pyrrolidin-1-yl)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00722] [0018] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (450 mg, 841.07 µmol, 1 eq) in DMA (5 mL) was added DIPEA (1.09 g, 8.41 mmol, 1.46 mL, 10 eq) and pyrrolidine (598.17 mg, 8.41 mmol, 702.08 µL, 10 eq). The mixture was stirred at 100 °C for 3 hrs. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with Saturated NaHCO3 (20 mL * 2) and saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(pyrrolidin-1-yl)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (360 mg, 584.02 µmol, 69.44% yield, 92.42% purity) as white solid. LC-MS (ES+, m/z): 570.6[(M+H)+]. Rt=0.877 min.
Step 2: (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5-(pyrrolidin-1- yl)pyrazine-2-carboxamide
[00723] To tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(pyrrolidin-1-yl)pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (260 mg, 456.39 µmol, 1 eq) was added HCl/MeOH (4 M, 50 mL). The mixture was stirred at 25 °C for 1 h. LCMS showed the reaction was completed. The precipitate was collected by filtration to give the crude product. The crude product was triturated with EtOAc (50mL) at 25 oC for 10 min to give (S)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido) propoxy)phenyl)amino)-5-(pyrrolidin-1-yl)pyrazine-2-carboxamide (210 mg, 430.75 µmol, 94.38% yield, 96.32% purity) as yellow solid. LC-MS (ES+, m/z): 470.5[(M+H)+]. Rt=0.727 min Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethyl-5-(pyrrolidin-1-yl)pyrazine-2-carboxamide
[00724] To a solution of (S)-6-ethyl-3-((3-(3-(2-(methylamino)propanamido)propoxy)phenyl)amino)-5- (pyrrolidin-1-yl)pyrazine-2-carboxamide (200 mg, 425.91 µmol, 1 eq) in DMF (8 mL) was added DIPEA (550.46 mg, 4.26 mmol, 741.87 µL, 10 eq) and BOP (282.56 mg, 638.87 µmol, 1.5 eq) and (E)-4- (dimethylamino)but-2-enoic acid (82.51 mg, 638.87 µmol, 1.5 eq). The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated NaHCO3 (20 mL * 2) and saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: C18-1150*30mm*5um; mobile phase: [water (TFA)-ACN]; B%: 10%-55%, 8 min) to give (S,E)-3-((3- (3-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) propoxy)phenyl)amino)-6-ethyl-5- (pyrrolidin-1-yl)pyrazine-2-carboxamide (61.65 mg, 88.74 µmol, 20.83% yield, 100% purity, TFA) as light white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.20 (s, 1H), 9.72 (br s, 1H), 8.15 - 7.91 (m, 1H), 7.64 (br s, 1H), 7.48 - 7.31 (m, 2H), 7.21 - 7.05 (m, 2H), 6.83 (br d, J = 15.1 Hz, 1H), 6.61 - 6.46 (m, 2H), 4.99 - 4.57 (m, 1H), 3.99 - 3.94 (m, 2H), 3.91 - 3.81 (m, 2H), 3.71 - 3.65 (m, 4H), 3.25 - 3.19 (m, 2H),
2.96 (s, 2H), 2.89 - 2.83 (m, 2H), 2.80 - 2.73 (m, 7H), 1.95 - 1.82 (m, 6H), 1.32 - 1.17 (m, 6H) LC-MS (ES+, m/z): 291.3[(M/2+H)+]. Rt=2.240 min. HRMS (EI): m/z [M+H]+: 581.3556. Example 50A (Compound 142A) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)phenethyl)carbamate
[00725] A mixture of tert-butyl (3-aminophenethyl)carbamate (2 g, 8.46 mmol, 1 eq) , 3,5-dichloro-6- ethylpyrazine-2-carboxamide (1.86 g, 8.46 mmol, 1 eq) in NMP (5 mL), DIPEA (21.88 g, 169.27 mmol,
29.48 mL, 20 eq) was added at 25 °C. The mixture was stirred at 140 °C for 10 hours. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (3.5 g, 6.67 mmol, 78.79% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.19 (s, 1H), 8.26 (s, 1H), 8.04 (br s, 1H), 7.59 (br d, J = 7.9 Hz, 1H), 7.32 - 7.23 (m, 2H), 6.93 - 6.83 (m, 2H), 3.16 (q, J = 6.5 Hz, 2H), 2.82 (q, J = 7.5 Hz, 2H), 2.69 (t, J = 7.3 Hz, 2H), 1.36 (s, 9H), 1.28 - 1.24 (m, 3H) LC-MS (ES+, m/z): 420.3[(M+H)+]; Rt=0.941 min. Step 2: tert-butyl (3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)carbamate
[00726] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (1 g, 2.38 mmol, 1 eq), 2,4,6-trimethyl-1,3,5,2,4,6-trioxatriborinane (1.49 g, 11.91 mmol, 5 eq) in DMA(12 mL) and H2O(3 mL), K2CO3 (987.41 mg, 7.14 mmol, 3 eq) and Pd(dppf)Cl2 (174.26 mg, 238.15 µmol, 0.1 eq) was added, the mixture was stirred at 100 °C for 10 hours. LCMS showed the reaction was completed. The residue was poured into saturated EDTA (100 mL) and EtOAc (30 mL) stirred for 60 min. The mixture was concentrated. The residue was diluted with NaHCO3(50 mL) and extracted with EtOAc (50 mL* 4). The organic layers were combined, washed with water (50 ml*2), saturated brine (50 ml), dried with anhydrous Na2SO4, Filtered and concentrated to give crude product. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1). To afford tert-butyl (3-((3- carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)carbamate (650 mg, 1.63 mmol, 68.32% yield) as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 8.14 (br d, J = 1.6 Hz, 1H), 7.86 (br d, J = 1.6 Hz, 1H), 7.65 (br d, J = 8.1 Hz, 1H), 7.44 - 7.42 (m, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.88 - 6.80 (m, 2H), 3.18 - 3.13 (m, 2H), 2.78 - 2.72 (m, 2H), 2.71 - 2.67 (m, 2H), 1.36 (s, 9H), 1.26 - 1.22 (m, 3H), 1.20 - 1.10 (m, 3H). LC-MS (ES+, m/z): 400.3[(M+H)+]; Rt=0.912 min. Step 3: 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00727] To a mixture of tert-butyl (3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)carbamate (650 mg, 1.63 mmol, 1 eq) in HCl/MeOH (4 M, 20 mL, 49.17 eq) at 14 °C for 1 hour. LCMS showed the reaction was completed. Filtered and concentrated in vacuum to afford 3- ((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (450 mg, 1.50 mmol, 92.38% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.08 (s, 1H), 8.15 (br s, 1H), 7.87 (br s, 1H), 7.71 (dd, J = 1.3, 8.1 Hz, 1H), 7.49 (s, 1H), 7.31 - 7.19 (m, 2H), 7.18 - 7.12 (m, 1H), 6.88 (d, J = 7.6 Hz, 1H), 3.07 - 3.01 (m, 2H), 2.91 - 2.86 (m, 2H), 2.74 (q, J = 7.5 Hz, 2H), 1.33 - 1.11 (m, 5H), 1.10 - 0.76 (m, 1H) LC-MS (ES+, m/z): 300.3[(M+H)+]; Rt=0.647 min. HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 4 tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate
[00728] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (450 mg, 1.50 mmol, 1 eq), N-(tert-butoxycarbonyl)-N-methyl-L-alanine (366.59 mg, 1.80 mmol, 1.2 eq) in DMF (8 mL), TCFH (632.63 mg, 2.25 mmol, 1.5 eq) and 1-methylimidazole (1.23 g, 15.03 mmol, 1.20 mL, 10 eq) was added, the mixture was stirred at 14 °C for 2 hours. LCMS showed the reaction was completed. The reaction was poured into H2O (30 mL). The aqueous phase was extracted with ethyl acetate (10 mL*6). The combined organic phase was washed with saturated brine (30 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1 g, 1.28 mmol, 85.12% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.06 (s, 1H), 8.14 (br d, J = 2.0 Hz, 1H), 7.85 (br d, J = 2.1 Hz, 1H), 7.83 - 7.76 (m, 1H), 7.67 - 7.60 (m, 1H), 7.45 (br s, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.82 (d, J = 7.7 Hz, 1H), 4.61 - 4.16 (d, 1H), 3.30 (br d, J = 6.8 Hz, 2H), 2.94 - 2.89 (m, 2H), 2.78 - 2.73 (m, 2H), 2.69 (br d, J = 8.3 Hz, 3H), 1.36 (br s, 9H), 1.25 - 1.21 (m, 3H), 1.19 - 1.15 (m, 3H). LC-MS (ES+, m/z): 485.4[(M+H)+]; Rt=0.877 min.
Step 5:(S)-6-ethyl-5-methyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide
[00729] To a mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1 g, 1.28 mmol, 1 eq) in HCl/MeOH (4 M, 20 mL, 62.53 eq) at 14 °C for 1 hour. LCMS showed the reaction was completed. Filtered and concentrated in vacuum to afford (S)-6-ethyl-5-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (430 mg, 1.12 mmol, 87.41% yield) as a yellow solid. LC-MS (ES+, m/z): 385.3[(M+H)+]; Rt=0.671 min. Note:HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 6: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00730] To a solution of (S)-6-ethyl-5-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (400 mg, 1.04 mmol, 1 eq), (E)- 4-(dimethylamino)but-2-enoic acid (161.25 mg, 1.25 mmol, 1.2 eq) in DMF (5 mL), BOP (690.21 mg, 1.56 mmol, 1.5 eq) and DIPEA (1.34 g, 10.40 mmol, 1.81 mL, 10 eq) was added at 14 °C, the mixture was stirred at 14 °C for 2 hours. LCMS showed the reaction was completed. The residue was purified by prep-HPLC(column: Phenomenex luna C18250*50mm*10 µm; mobile phase: [water(TFA)-ACN];B%: 20%-50%,10min) to afford (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (100.3 mg, 202.37 µmol, 19.45% yield) as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.09 - 11.03 (m, 1H), 9.75 (s, 1H) 8.16 (br s, 1H), 7.92 (br t, J = 5.5 Hz, 1H), 7.86 (br s, 1H), 7.66 (br d, J = 7.7 Hz, 1H), 7.43 (s, 1H), 7.28 - 7.17 (m, 1H), 6.88 - 6.73 (m, 2H), 6.66 - 6.44 (m, 1H), 5.03 - 4.51 (m, 1H), 3.94 - 3.78 (m, 2H), 3.34 - 3.26 (m, 2H), 2.90 (s, 2H), 2.78 -2.70 (m, 11H), 2.50 (m, 3H), 1.29 (d, J = 6.9 Hz, 1H), 1.27 - 1.19 (m, 5H). LC-MS (ES+, m/z): 496.4[(M+H)+]; Rt=0.682 min; HRMS:496.3003.
Example 51 (Compound 143) (S,E)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 5: tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00731] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 934.52 µmol, 1 eq),N- methylmethanamine; hydrochloride (762.05 mg, 9.35 mmol, 10 eq) in DMA (5 mL) was added DIEA (1.21 g, 9.35 mmol, 1.63 mL, 10 eq).The mixture was stirred at 100°C for 10 hrs under N2. LCMS indicated the reaction was completed. The reaction was poured into water (10 mL) and extracted with EtOAc(5 mL*2). The organic layers were combined, washed with water (20 mL*2), sat. brine (20 mL), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/2). To afford tert-butyl (S)-(1- ((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate (300 mg, 551.82 µmol) as yellow solid.1H NMR (400 MHz, CDCl3- d) δ = 10.73 (s, 1H), 7.51 (br s, 1H), 7.22 (s, 1H), 7.06 (s, 1H), 6.31 (s, 1H), 5.27 - 5.22 (m, 1H), 4.70 - 4.42 (m, 1H), 3.72 (s, 3H), 3.52 - 3.41 (m, 3H), 3.04 (s, 6H), 2.72 - 2.66 (m, 4H), 2.62 (s, 3H), 1.33 (s, 9H), 1.27 - 1.19 (m, 6H). LC-MS (ES+, m/z): 544.4[(M+H)+]; Rt=0.870 min. Step 1: (S)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00732] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (300 mg, 551.82 µmol, 1 eq) in HCl/MeOH (50 mL) .The mixture was stirred at 25°C for 1h. LCMS indicated the reaction was completed. The crude mixture was concentrated under reduced pressure. To afford the crude mixture of (S)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2-(methylamino)propanamido)ethyl) phenyl)amino)pyrazine-2-carboxamide (230 mg, 518.55 µmol, 93.97% yield) As yellow solid. LC-MS (ES+, m/z): 444.3[(M+H)+]; Rt=0.734 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M) Step 2: (S,E)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00733] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (230 mg, 518.55 µmol, 1 eq), (E)-4-(dimethylamino)but-2-enoic acid (171.76 mg, 1.04 mmol, 2 eq, HCl) in DMF (4 mL) was added DIEA (670.19 mg, 5.19 mmol, 903.23 µL, 10 eq), BOP (344.02 mg, 777.83 µmol, 1.5 eq). The mixture was stirred at 25°C for 2 h under N2. LCMS indicated the reaction has completed. The mixture was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)- ACN];B%: 20%-50%,8min.to afford (S,E)-5-(dimethylamino)-6-ethyl-3-((3-methoxy-5-(2-(2-(N-methyl- 4-(methylamino)but-2-enamido)propanamido)ethyl) phenyl)amino)pyrazine-2-carboxamide (60 mg, 108.17 µmol, 20.86% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.24 - 11.00 (m, 1H), 9.74 (br d, J = 2.7 Hz, 1H), 8.12 - 7.86 (m, 1H), 7.77 (br s, 1H), 7.47 (br s, 1H), 7.41 - 7.35 (m, 1H), 6.90 (s, 1H), 6.85 - 6.77 (m, 1H), 6.64 - 6.48 (m, 1H), 6.38 (s, 1H), 5.05 - 4.53 (m, 1H), 3.90 - 3.80 (m, 2H), 3.75 (s, 3H), 3.34 - 3.24 (m, 2H), 3.08 (s, 6H), 2.91 (s, 2H), 2.81 - 2.63 (m, 11H), 1.32 - 1.20 (m, 6H). LC-MS (ES+, m/z): 555.3[(M+H)+]; Rt=2.117 min; HRMS:555.3435.
Example 52 (Compound 144) Scheme 18
(S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-methoxyphenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00734] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 934.52 µmol, 1 eq), cyclopropylboronic acid (802.73 mg, 9.35 mmol, 10 eq) in DMA (4 mL) ,H2O (2 mL) . The mixture was stirred at 100 °C for 10 hrs under N2. LCMS indicated the reaction has completed. The reaction was poured into saturated EDTA (10 mL), EtOAc(5 mL) and stirred 60 min, and extracted with EtOAc(5 mL*3). The organic layers were combined, washed with water (20 mL*2), sat. brine (20 mL), dried with anhydrous Na2SO3, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1). To afford tert-butyl (S)-(1-((3-((3- carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)-5-methoxyphenethyl)amino) -1-oxopropan-2- yl)(methyl)carbamate (330 mg, 610.37 µmol, 65.31% yield) as white solid. LC-MS (ES+, m/z): 541.3[(M+H)+]; Rt=0.890 min.
Step 2: (S)-5-cyclopropyl-6-ethyl-3-((3-methoxy-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00735] To solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (330 mg, 610.37 µmol, 1 eq) in DCM (40 mL) was added TFA (20 mL) . The mixture was stirred at 25°C for 1h. LCMS indicated the reaction was completed. The crude mixture was concentrated under reduced pressure. Then, the mixture was put into next step directly. to afford crude mixture of (S)-5-cyclopropyl-6-ethyl-3-((3-methoxy-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (250 mg, 567.49 µmol, 92.97% yield) as yellow oil. LC-MS (ES+, m/z): 441.3[(M+H)+]; Rt=0.753 min. Step 3: (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-methoxyphenyl)amino)-6-ethylpyrazine-2-carboxamide
[00736] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-methoxy-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (250 mg, 567.49 µmol, 1 eq), (E)-4-(dimethylamino)but-2-enoic acid (187.97 mg, 1.13 mmol, 2 eq, HCl) in DMF (4 mL) was added BOP (376.48 mg, 851.23 µmol, 1.5 eq), DIEA (733.44 mg, 5.67 mmol, 988.46 µL, 10 eq). The mixture was stirred at 25 °C for 2hrs under N2. LCMS indicated the reaction was completed. The crude mixture was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)- ACN];B%: 20%-50%,8min. to afford (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut- 2-enamido)propanamido)ethyl)-5-methoxyphenyl) amino)-6-ethylpyrazine-2-carboxamide (70 mg, 126.89 µmol, 22.36% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.18 - 11.02 (m, 1H), 9.75 (br s, 1H), 8.15 (s, 1H), 7.92 (t, J = 5.6 Hz, 1H), 7.84 (br s, 1H), 7.38 (br d, J = 1.9 Hz, 1H), 6.86 - 6.78 (m, 1H), 6.78 - 6.75 (m, 1H), 6.65 - 6.48 (m, 1H), 6.40 (s, 1H), 5.02 - 4.54 (m, 1H), 3.92 - 3.81 (m, 2H), 3.77 (s, 3H), 3.35 - 3.25 (m, 2H), 2.96 - 2.87 (m, 4H), 2.82 - 2.64 (m, 9H), 2.39 - 2.27 (m, 1H), 1.32 - 1.19 (m, 6H), 1.15 - 1.07 (m, 4H). LC-MS (ES+, m/z): 552.3 [(M+H)+]; Rt=2.188 min; HRMS:552.3289
Example 53 (Compound 145) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl) amino) pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl) (methyl) carbamate
To a solution of To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (500 mg, 934.52 µmol, 1 eq) and N-methylpropan-2-amine (683.47 mg, 9.35 mmol, 973.61 µL, 10 eq) in DMA (10 mL) was added DIPEA (1.21 g, 9.35 mmol, 1.63 mL, 10 eq) at 20 °C. The mixture was stirred at 100 °C for 12 hrs in sealed tube. LC-MS showed the reaction was completed. The mixture was cooled to 20 °C. The residue was poured into water (15 mL) and stirred for 5 min. The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (10 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give crude product. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=10/1, 1/1). to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino) phenoxy)propyl) amino) -1-oxopropan-2-yl)(methyl)carbamate (400 mg, 699.66 µmol, 74.87% yield). LC-MS (ES+, m/z): 572.4[(M+H)+]. Rt = 0.953 min. Step 2: (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00737] [0007] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(isopropyl (methyl)amino)pyrazin-2-yl)amino) phenoxy)propyl) amino) -1-oxopropan-2-yl) (methyl)carbamate (400 mg, 699.66 µmol, 1 eq) was added HCl/MeOH (4 M, 174.91 µL, 1 eq) in one portion at 25 °C. The mixture was stirred at 25 °C for 3 hrs. LCMS showed the reaction was completed. The mixture was concentrated under reduced pressure to (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(3-(2- (methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (300 mg, crude, HCl) as yellow solid. LC-MS (ES+, m/z): 472.4[(M+H)+]. Rt=0.743 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropyl(methyl) amino) pyrazine-2-carboxamide
[00738] To a solution of (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (300 mg, 636.14 µmol, 1 eq) in DMF (3 mL) was added DIPEA (822.16 mg, 6.36 mmol, 1.11 mL, 10 eq) and BOP (422.03 mg, 954.21 µmol, 1.5 eq) and (E)-4-(dimethylamino)but-2-enoic acid (158.03 mg, 954.21 µmol, 1.5 eq, HCl) .The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex luna C18250*50mm*10 um; mobile phase: [water (TFA)-ACN]; B%: 30%-70%, 10 min) to give (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropyl (methyl)amino) pyrazine-2- carboxamide (68.97 mg, 98.99 µmol, 15.56% yield,) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.18 - 11.14 (m, 1H), 9.92 - 9.84 (m, 1H), 8.16 - 7.93 (m, 1H), 7.80 - 7.75 (m, 1H), 7.51 - 7.47 (m, 1H), 7.43 - 7.37 (m, 1H), 7.21 - 7.15 (m, 1H), 7.11 - 7.03 (m, 1H), 6.87 - 6.80 (m, 1H), 6.64 - 6.48 (m, 2H), 5.05 - 4.54 (m, 1H), 4.27 - 4.19 (m, 1H), 3.99 - 3.81 (m, 4H), 3.28 - 3.18 (m, 2H), 2.97 - 2.94 (m, 2H), 2.86 (s, 3H), 2.79 - 2.69 (m, 9H), 1.89 - 1.81 (m, 2H), 1.28 - 1.18 (m, 12H). LC-MS (ES+, m/z): 583.3[(M+H)+]. Rt=2.329 min. HRMS (EI): m/z [M+H]+ found: 583.3702.
Example 54 (Compound 146) (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2- carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino) pyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl) (methyl) carbamate
[00739] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 934.52 µmol, 1 eq) and N-methylethanamine (552.39 mg, 9.35 mmol, 802.90 µL, 10 eq) in DMA (5 mL, N/A purity) was added DIEA (1.21 g, 9.35 mmol, 1.63 mL, N/A purity, 10 eq) at 20 °C .The mixture was stirred at 100 °C for 12 hrs in sealed tube. LC-MS showed the reaction was completed. The mixture was cooled to 20 °C .The residue was poured into water (30 mL) and stirred for 5 min. The aqueous phase was extracted with ethyl acetate (20 mL*3).The combined organic phase was washed with brine (10 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum to give crude product. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=10/1, 1/1) to give tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6- (ethyl(methyl)amino)pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl) (methyl) carbamate (380 mg, 681.39 µmol, 72.91% yield) LC-MS (ES+, m/z): 558.4[(M+H)+]. Rt = 0.924 min. Step 2: (S)-6-ethyl-5-(ethyl(methyl)amino)-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00740] [0010] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino) pyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl) (methyl) carbamate (380 mg, 699.66
µmol, 1 eq) was added HCl/MeOH (4 M, 17.47 mL, 102.56 eq) in one portion at 25 °C under N2 atmosphere. The mixture was stirred at 25 °C for 1 h. LCMS showed the reaction was completed. The mixture was concentrated under reduced pressure to (S)-6-ethyl-5-(ethyl(methyl)amino)-3-((3-(3-(2- (methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (290 mg, crude, HCl) as yellow solid. LC-MS (ES+, m/z): 458.4[(M+H)+]. Rt=0.723 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 3: (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropyl(methyl) amino) pyrazine-2-carboxamide
[00741] To a solution of (S)-6-ethyl-5-(ethyl(methyl)amino)-3-((3-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (290 mg, 587.01 µmol, 1 eq, HCl) in DMF (3 mL) was added DIEA (758.67 mg, 5.87 mmol, 1.02 mL, 10 eq) and BOP (389.44 mg, 880.52 µmol, 1.5 eq) and (E)-4-(dimethylamino)but-2-enoic acid (145.83 mg, 880.52 µmol, 1.5 eq, HCl).The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex luna C18250*50mm*10 µm; mobile phase: [water (TFA)-ACN]; B%: 30%-60%, 10 min.) to give (S,E)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-(isopropyl (methyl) amino) pyrazine-2- carboxamide (69.00 mg, 122.61 µmol, 20.89% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.22 - 11.11 (m, 1H), 9.76 - 9.64 (m, 1H), 8.13 - 7.90 (m, 1H), 7.75 (br s, 1H), 7.46 (br s, 1H), 7.43 - 7.36 (m, 1H), 7.21 - 7.14 (m, 1H), 7.13 - 7.03 (m, 1H), 6.84 (br d, J = 15.1 Hz, 1H), 6.64 - 6.48 (m, 2H), 5.00 - 4.55 (m, 1H), 3.97 (br t, J = 6.2 Hz, 2H), 3.89 (br s, 2H), 3.50 - 3.39 (m, 2H), 3.30 - 3.17 (m, 2H), 3.04 (s, 3H), 2.96 (s, 2H), 2.80 - 2.70 (m, 9H), 1.91 - 1.79 (m, 2H), 1.34 - 1.14 (m, 9H). LC-MS (ES+, m/z): 569.3[(M+H)+]. Rt=2.257 min HRMS (EI): m/z [M+H]+ found: 569.3575. Example 55 (Compound 147) [00742] The following compounds were or can be prepared using the appropriate reagents and the corresponding starting materials, and following the procedure described in Compound (S,E)-6-ethyl-3-((3- (3-(2-(4-(3-fluoroazetidin-1-yl)-N-methylbut-2-enamido)propanamido)propoxy)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (Compound 139):
[00743] (S,E)-3-((3-(3-(2-(4-(3,3-difluoroazetidin-1-yl)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxamide
[00744] 1H NMR (400 MHz, DMSO-d6) δ = 11.24 (s, 1H), 8.12 - 7.83 (m, 1H), 7.60 - 7.54 (m, 1H), 7.52 - 7.46 (m, 1H), 7.31 - 7.25 (m, 1H), 7.17 (t, J = 8.1 Hz, 1H), 7.02 - 6.96 (m, 1H), 6.92 - 6.84 (m, 1H), 6.60 - 6.44 (m, 3H), 5.00 - 4.54 (m, 1H), 4.18 - 4.08 (m, 1H), 4.00 - 3.89 (m, 4H), 3.65 - 3.56 (m, 4H), 3.29 (br s, 3H), 2.92 (s, 2H), 2.67 (br s, 6H), 1.92 - 1.80 (m, 4H), 1.71 - 1.59 (m, 2H), 1.31 - 1.16 (m, 6H) [00745] 1H NMR (400 MHz, DMSO+D2O- d6) δ = 11.21 - 11.16 (m, 1H), 7.87 (s, 1H), 7.62 - 7.53 (m, 1H), 7.52 - 7.44 (m, 1H), 7.24 - 7.20 (m, 1H), 7.20 - 7.14 (m, 1H), 7.00 - 6.94 (m, 1H), 6.93 - 6.83 (m, 1H), 6.44 (br s, 1H), 4.97 - 4.89 (m, 1H), 4.56 (s, 1H), 4.17 - 4.04 (m, 1H), 3.97 - 3.89 (m, 4H), 3.65 - 3.53 (m, 4H), 3.46 - 3.39 (m, 2H), 3.35 - 3.18 (m, 4H), 2.91 (s, 2H), 2.74 (s, 1H), 2.58 (q, J = 7.4 Hz, 2H), 1.91 - 1.80 (m, 4H), 1.69 - 1.58 (m, 2H), 1.24 - 1.13 (m, 6H) ; MW 658.75; LCMS 659.4; HRMS 659.3480. Example 56 (Compound 148) (S,E)-5-(azetidin-1-yl)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-(3-((6-(azetidin-1-yl)-3-carbamoyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00746] To a solution of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 934.52 µmol, 1 eq) azetidin (874.29 mg, 9.35 mmol, 10 eq) in DMA (5 mL) at 25 °C, DIPEA (1.21 g, 9.35 mmol, 1.63 mL, 10 eq) was added. The mixture was stirred at 100 °C for 10 hrs. LCMS showed the reaction was completed. The reaction was poured into water (20 mL) and extracted with EtOAc (10 mL *3). The organic layers were combined, washed with water (20 mL *3), saturated brine (5 mL), dried with Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc =1/2). To give tert-butyl (S)-(1-((3-(3-((6-(azetidin-1-yl)-3- carbamoyl-5-ethylpyrazin-2-yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (300 mg, 539.89 µmol, 57.77% yield) as yellow solid. LC-MS (ES+, m/z): 556.5 [(M+H)+]. Rt=0.866 min Step 2: (S)-5-(azetidin-1-yl)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00747] [0016] To a solution of (S)-tert-butyl (1-((3-(3-((6-(azetidin-1-yl)-3-carbamoyl-5-ethylpyrazin-2- yl)amino)phenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (300 mg, 539.89 µmol, 1 eq) in DCM (10 mL) ,TFA (61.56 mg, 539.89 µmol, 39.97 µL, 1 eq) was added at 25 °C. The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give (S)-5-(azetidin-1-yl)-6-ethyl-3-((3-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (210 mg, crude) as yellow solid. LC-MS (ES+, m/z): 456.3 [(M+H)+]. Rt=0.690 min Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 3: (S,E)-5-(azetidin-1-yl)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00748] A mixture of (S)-5-(azetidin-1-yl)-6-ethyl-3-((3-(3-(2- (methylamino)propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide (210 mg, 460.98 µmol, 1 eq) and (E)-4-(dimethylamino)but-2-enoic acid (119.08 mg, 921.96 µmol, 2 eq) in DMF (4 mL) was added BOP (305.82 mg, 691.47 µmol, 1.5 eq) and DIPEA (595.78 mg, 4.61 mmol, 802.94 µL, 10 eq), then
stirred at 25 °C for 10 hrs. LCMS indicated the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The crude was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 10%-40%, 8 min) to afford compound (S,E)-5-(azetidin-1-yl)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)phenyl)amino)-6-ethylpyrazine-2-carboxamide (67.04 mg, 118.30 µmol, 25.66% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.33 - 11.23 (m, 1H), 9.67 - 9.54 (m, 1H), 8.14 - 7.91 (m, 1H), 7.72 - 7.58 (m, 1H), 7.50 - 7.42 (m, 1H), 7.40 - 7.33 (m, 1H), 7.19 - 7.06 (m, 2H), 6.87 - 6.78 (m, 1H), 6.64 - 6.53 (m, 1H), 6.50 (br d, J = 7.9 Hz, 1H), 5.02 - 4.57 (m, 1H), 4.30 (t, J = 7.5 Hz, 4H), 3.97 (br t, J = 6.1 Hz, 2H), 3.91 - 3.83 (m, 2H), 3.25 - 3.18 (m, 2H), 2.96 (s, 2H), 2.80 - 2.73 (m, 7H), 2.66 - 2.59 (m, 2H), 2.33 (br s, 2H), 1.89 - 1.81 (m, 2H), 1.33 - 1.25 (m, 3H), 1.19 (t, J = 7.4 Hz, 3H). LC-MS (ES+, m/z): 567.4[(M+H)+]. Rt=2.162 min. 97.884% purity. HRMS (EI): m/z [M+H]+ found:567.3417. Example 57 (Compound 149)
(S,E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (3-(3-fluoro-5-nitrophenoxy)propyl)carbamate
[00749] To a mixture of tert-butyl (3-hydroxypropyl)carbamate (22.03 g, 125.71 mmol, 1 eq) in DMF (200 mL) was added NaH (11.06 g, 276.57 mmol, 2.2 eq) at 0 °C under N2. The mixture was stirred at 0 °C for 30 min, then 1,3-difluoro-5-nitrobenzene (20 g, 125.71 mmol, 1 eq) was added and the mixture was stirred at 10 °C for 2 hrs. LCMS showed the reaction was completed. The residue was poured into ice- water (w/w = 1/1) (200 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (50 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 3/1) to afford tert-butyl (3-(3-fluoro-5- nitrophenoxy)propyl)carbamate (10.3 g, 32.77 mmol, 26.07% yield) as a yellow oil. LC-MS (ES+, m/z): 259.1 [(M+H)+]. Rt=0.840 min. Step 2: 3-(3-fluoro-5-nitrophenoxy) propan-1-amine
[00750] [0022] To a tert-butyl (3-(3-fluoro-5-nitrophenoxy)propyl)carbamate (5 g, 13.20 mmol, 1 eq) was added HCl/EtOAc (4 M, 50 mL) at 20 °C under N2. The mixture was stirred at 20 °C for 1 h. LCMS showed the reaction was completed. The mixture was filtered and the cake was dried in vacuum to afford 3-(3-fluoro-5-nitrophenoxy) propan-1-amine (2.7 g, crude) as yellow solid. LC-MS (ES+, m/z): 215.1 [(M+H)+]. Rt=0.357 min. Note: HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M).
Step 3: tert-butyl (S)-(1-((3-(3-fluoro-5-nitrophenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate
[00751] To a mixture of 3-(3-fluoro-5-nitrophenoxy) propan-1-amine (2.7 g, 12.61 mmol, 1 eq) and N- (tert-butoxycarbonyl)-N-methyl-L-alanine (3.84 g, 18.91 mmol, N/A purity, 1.5 eq) in DMF (60 mL, N/A purity) was added BOP (8.36 g, 18.91 mmol, 1.5 eq) and DIPEA (17.57 mL, 100.84 mmol, 8 eq) at 20 °C under N2. The mixture was stirred at 20 °C for 2 hrs. LCMS showed the reaction was completed. The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (50 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=15/1 to 3/1) to afford tert-butyl (S)-(1-((3-(3-fluoro-5-nitrophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (4 g, 10.01 mmol, 79.45% yield,) as yellow oil. LC-MS (ES+, m/z): 344.1 [(M+H)+]. Rt=0.286 min. Step 4: tert-butyl (S)-(1-((3-(3-amino-5-fluorophenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate
[00752] To tert-butyl (S)-(1-((3-(3-fluoro-5-nitrophenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (4 g, 10.01 mmol, N/A purity, 1 eq) in EtOH (50 mL) and H2O (25 mL) was added NH4Cl (2.41 g, 45.07 mmol, 4.5 eq) at 20 °C under N2, Fe (2.52 g, 45.07 mmol, 4.5 eq) was added at 60 °C, the mixture was stirred at 80 °C for 2 hrs. LCMS showed the reaction was completed. The residue was poured into ice-water (w/w = 1/1) (30 mL) and stirred for 30 min. Fe powder was filtered and washed with MeOH (50 mL*3). The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (50 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert-butyl (S)-(1-((3-(3-amino-5-fluorophenoxy)propyl)amino)-1- oxopropan-2-yl)(methyl) carbamate (2.5 g, 6.77 mmol, 67.57% yield) as yellow oil. LC-MS (ES+, m/z): 370.2[(M+H)+]; Rt=0.719 min.
Step 5: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00753] To a mixture of tert-butyl (S)-(1-((3-(3-amino-5-fluorophenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (1 g, 2.71 mmol, 1 eq) and 3,5-dichloro-6-ethylpyrazine-2-carboxamide (595.66 mg, 2.71 mmol, 1 eq) in NMP (5 mL) was added DIPEA (9.43 mL, 54.14 mmol, 20 eq) at 20 °C under N2. The mixture was stirred at 140 °C for 10 hrs in sealed tube. LCMS showed the reaction was completed. The mixture was cooled to 20 °C. The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water (TFA)-ACN]; B%: 10%-40%, 8 min.) to afford tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (450 mg, 813.71 µmol, 30.06% yield) as a brown solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.39 - 11.32 (m, 1H), 8.34 - 8.26 (m, 1H), 8.12 - 8.04 (m, 1H), 7.90 - 7.81 (m, 1H), 7.24 - 7.15 (m, 1H), 7.00 - 6.95 (m, 1H), 6.52 - 6.45 (m, 1H), 4.56 - 4.21 (m, 1H), 4.00 (br t, J = 6.1 Hz, 2H), 3.28 - 3.15 (m, 2H), 2.89 - 2.78 (m, 2H), 2.75 - 2.65 (m, 3H), 1.91 - 1.82 (m, 2H), 1.41 - 1.32 (m, 9H), 1.29 - 1.21 (m, 6H). LC-MS (ES+, m/z): 553.3[(M+H)+]. Rt=0.909min. Step 6: tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00754] To a mixture of tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (400 mg, 723.29 µmol, 1 eq) and methylmethanamine (294.90 mg, 3.62 mmol, 5 eq) in DMA (5 mL, N/A purity) was DIPEA (934.81 mg, 7.23 mmol, 1.26 mL, N/A purity, 10 eq) at 20 °C under N2. The mixture was stirred at 100 °C for 10 hrs in sealed tube. LCMS showed the reaction was completed. The residue was poured into ice-water (w/w = 1/1) (5 mL) and stirred for 30 min. The aqueous phase was extracted with ethyl acetate (10 mL*3). The combined organic phase was washed with saturated brine (10 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 3/1) to afford compound tert-butyl (S)-(1-((3-(3-((3-carbamoyl-6-
(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5-fluorophenoxy)propyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (380 mg, 676.58 µmol, 46.77% yield ) as a brown solid. LC-MS (ES+, m/z): 562.3 [(M+H)+]. Rt=0.899min. Step 7: (S)-5-(dimethylamino)-6-ethyl-3-((3-fluoro-5-(3-(2-(methylamino) propanamido)propoxy)phenyl)amino)pyrazine-2-carboxamide
[00755] To a tert-butyl (
-(1-((3-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (380 mg, 676.58 µmol,, 1 eq) was added HCl/EtOAc (4 M, 10 mL). The mixture was stirred at 20 °C for 1 h. The residue was concentrated under reduced pressure to obtain compound (S)-5-(dimethylamino)-6-ethyl-3-((3-fluoro-5-(3-(2- (methylamino) propanamido) propoxy) phenyl)amino)pyrazine-2-carboxamide (300 mg, 650.01 µmol, 48.04% yield,) as a yellow solid. LC-MS (ES+, m/z): 462.3 [(M+H)+]. Rt=0.727min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M). Step 8: (S,E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
[00756] To a mixture of (S)-5-(dimethylamino)-6-ethyl-3-((3-fluoro-5-(3-(2-(methylamino) propanamido) propoxy) phenyl)amino)pyrazine-2-carboxamide (300 mg, 650.01 µmol, N/A purity, 1 eq) and (E)-4-(dimethylamino)but-2-enoic acid (322.96 mg, 1.95 mmol, N/A purity, 3 eq) in DMF (3.5 mL, N/A purity) was added BOP (574.97 mg, 1.30 mmol, N/A purity, 2 eq) and DIPEA (840.09 mg, 6.50 mmol, 1.13 mL, N/A purity, 10 eq) at 25 °C under N2. The mixture was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was complete. The mixture was filtered. The filtrate was concentrated. The crude was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water (TFA)- ACN]; B%: 25%-55%, 8 min) to afford (S,E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N- methylbut-2-enamido) propanamido)propoxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide (70.81 mg, 121.06 µmol, 18.62% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.31 (s, 1H), 9.67 (br s, 1H), 8.12 - 7.87 (m, 1H), 7.78 (br s, 1H), 7.50 (br s, 1H), 7.40 - 7.24 (m, 1H), 6.99 - 6.88 (m, 1H), 6.87 - 6.76 (m, 1H), 6.66 - 6.45 (m, 1H), 6.35 (td, J = 2.1, 10.7 Hz, 1H), 5.01 - 4.53 (m, 1H), 4.01 - 3.79 (m, 4H), 3.23 - 3.15 (m, 2H), 3.05 (s, 6H), 2.94 (s, 2H), 2.79 - 2.71 (m, 9H), 1.89 - 1.76 (m,
2H), 1.35 - 1.19 (m, 6H). LC-MS (ES+, m/z): 573.4 [(M+H)+]. Rt=2.227 min, 97.91% purity. HRMS (EI): m/z [M]+ found: 573.3327. Example 58 (Compound 150) (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide
Step 1: tert-butyl (3-((6-chloro-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)phenethyl)carbamate
[00757] To a mixture of 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide (300 mg, 1.28 mmol, 1 eq) and tert-butyl (3-aminophenethyl)carbamate (302.85 mg, 1.28 mmol, 1 eq) in NMP (3 mL) was added DIPEA (3.31 g, 25.63 mmol, 20 eq) in one portion at 25 °C under N2, then heated to 140 °C and stirred for 24 hours. LCMS showed the starting material was consumed completely. The residue was poured into H2O (40 mL). The aqueous phase was extracted with ethyl acetate (10 mL*3). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2CO3 Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1). To afford the title compound tert-butyl (3-((6-chloro-5-ethyl-3- (methylcarbamoyl)pyrazin-2-yl)amino)phenethyl)carbamate (360 mg, 829.63 µmol, 64.73% yield) as a yellow solid. LC-MS (ES+, m/z)434.3 [(M+H)+]; Rt = 0.989min. Step 2: tert-butyl (3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)phenethyl)carbamate
[00758] To a mixture of tert-butyl (3-((6-chloro-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)phenethyl)carbamate (360 mg, 829.63 µmol, 1 eq) and 4-(chloromethyl)-6- methylbenzo[b]thiophene (338.26 mg, 4.15 mmol, 5 eq) in DMA (4 mL) was added DIEA (1.07 g, 8.30 mmol, 1.45 mL, 10 eq) in one portion at 25 °C under N2 , then heated to 100 °C and stirred for 10 hours. LCMS showed the starting material was consumed completely. The residue was poured into H2O (20 mL). The aqueous phase was extracted with ethyl acetate (10 mL*3). The combined organic phase was washed with saturated brine (10 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1). Compound tert-butyl (3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)phenethyl)carbamate (250 mg, 564.90 µmol, 68.09% yield) was obtained as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.14 (s, 1H), 8.29 (br d, J = 4.9 Hz, 1H), 7.61 (br s, 1H), 7.44 (br d, J = 7.8 Hz, 1H), 7.19 (t, J = 7.8 Hz, 1H), 6.86 (br s, 1H), 6.78 (br d, J = 7.4 Hz, 1H), 3.17 - 3.11 (m, 2H), 3.05 (s, 6H), 2.83 (d, J = 4.6 Hz, 3H), 2.75 (q, J = 7.4 Hz, 2H), 2.66 (br t, J = 7.4 Hz, 2H), 1.36 (s, 9H), 1.24 (t, J = 7.3 Hz, 3H) LC-MS (ES+, m/z):443.4 [(M+H)+]; Rt=0.979min. Step 3: 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethyl-N-methylpyrazine-2- carboxamide
[00759] To a mixture of tert-butyl (3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)phenethyl)carbamate (250 mg, 564.90 µmol, 1 eq) in HCl/MeOH (30 mL) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 0.5 hours. LCMS showed the reaction was completed. The residue concentrated in vacuum. Compound 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)- 6-ethyl-N-methylpyrazine-2-carboxamide (200 mg, crude) was obtained as a yellow solid. LC-MS (ES+, m/z): 343.3 [(M+H)+]; Rt=0.702min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 4: (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide
[00760] To a mixture of 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethyl-N- methylpyrazine-2-carboxamide (180 mg, 525.64 µmol, 1 eq) and (E)-N-(4-(dimethylamino)but-2-enoyl)- N-methyl-L-alanine (281.56 mg, 1.31 mmol, 2.5 eq) in DMF (3 mL) was added BOP (464.96 mg, 1.05 mmol , 2 eq) DIPEA (543.49 mg, 4.21 mmol, 8 eq) in one portion at 25°C under N2 and stirred for 2 hours. LCMS showed the reaction was completed. The reaction solution was filtered. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)- ACN];B%: 15%-45%,8min) to give desired compound as a brown solid, which was further separated by SFC (column: DAICEL CHIRALPAK AD(250mm*30mm,10um);mobile phase: [IPA (0.1%IPAm)];B%: 40%-40%,27min). To afford the title compound (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)- N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide (61.4 mg, 111.33 µmol, 21.18% yield) as a brown solid. 1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.15 (s, 1H), 9.90 - 9.71 (m, 1H), 8.32 (q, J = 4.6 Hz, 1H), 8.14 - 7.88 (m, 1H), 7.59 (s, 1H), 7.50 - 7.45 (m, 1H), 7.23 - 7.17 (m, 1H), 6.85 - 6.75 (m, 2H), 6.63 - 6.46 (m, 1H), 5.00 - 4.94 (m, 1H), 3.91 - 3.80 (m, 2H), 3.32 - 3.25 (m, 2H), 3.06 (s, 6H), 2.90 (s, 2H), 2.83 - 2.81 (m, 3H), 2.79 - 2.74 (m, 8H), 2.71 - 2.66 (m, 3H), 1.29 - 1.20 (m, 6H) LC-MS (ES+, m/z): 582.2 [(M+H)+]; Rt=2.057 min. HRMS (EI): m/z [M]+ found: 539.3524 Example 59 (Compound 151)
(E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide
Step 1: methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate
[00761] [0043] A mixture of 3,5-dichloro-6-ethylpyrazine-2-carboxamide (15 g, 68.16 mmol, 1.0 eq) in HCl/MeOH (4 M, 350.03 mL, 20.54 eq) was stirred at 90 °C for 10 hrs. LCMS showed the reaction was completed. The mixture was concentrated. The residue was diluted with saturated NaHCO3 (300 mL) and extracted with EtOAc (150 mL* 3). The organic layers were combined, washed with water (100 mL*2) and saturated brine (100 mL*1), dried with Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica gel (petroleum ether/EtOAc = 100/1) to afford methyl 3,5-dichloro-6-ethylpyrazine-2-carboxylate (13 g, 55.30 mmol, 81.13% yield) as a yellow oil. LC- MS (ES+, m/z): 235.1 [(M+H)+]. Rt=0.830 min. Step 2: 3,5-dichloro-6-ethylpyrazine-2-carboxylic acid
[0044] A mixture of 3,5-dichloro-6-ethylpyrazine-2-carboxylate (4.8 g, 20.42 mmol, 1.0 eq) in HCl (12 M, 671.40 mL, 131.52 eq) was stirred at 80 °C for 1 h. LCMS showed the reaction was completed. The reaction was poured into H2O (100 mL). The aqueous phase was extracted with ethyl acetate (50 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4 filtered and concentrated in vacuum to afford 3,5-dichloro-6-ethylpyrazine-2-carboxylic acid (3 g, 13.57 mmol, 66.47% yield) as a yellow solid. LC-MS (ES+, m/z): 221.1 [(M+H)+]. Rt=0.688 min.
Step 3: 3,5-dichloro-6-ethylpyrazine-2-carbonyl chloride
[00762] To a mixture of 3,5-dichloro-6-ethyl-pyrazine-2-carboxylic acid (1 g, 4.52 mmol, 1.0 eq) in DCM (10 mL) was added DMF (16.53 mg, 226.20 µmol, 0.05 eq) and (COCl)2 (1.15 g, 9.05 mmol, 2.0 eq) in one portion at 0 °C under N2 for 1 h. LCMS showed the reaction was completed. Filtered and concentrated in vacuum to afford 3,5-dichloro-6-ethylpyrazine-2-carbonyl chloride (0.8 g, 3.34 mmol, 73.84% yield) as a yellow solid. LC-MS (ES+, m/z): 235.1 [(M+H)+]. Rt=0.826 min. Step 4: 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide
[00763] [0046] A mixture of 3,5-dichloro-6-ethylpyrazine-2-carbonyl chloride (0.8 g, 3.34 mmol, 1.0 eq) and MeNH2.HCl (451.08 mg, 6.68 mmol, 2.0 eq) in DCM (10 mL) was added DIPEA (2.16 g, 16.70 mmol, 5.0 eq). The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (30 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=10/1 to 1/1) to afford 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide (500 mg, 2.14 mmol, 63.94% yield) as a brown solid. LC-MS (ES+, m/z): 234.1 [(M+H)+]. Rt=0.705 min. Step 5: tert-butyl (3-(3-((6-chloro-5-ethyl-3-(methylcarbamoyl)pyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00764] To a mixture of tert-butyl (3-(3-amino-5-fluorophenoxy)propyl)carbamate (850 mg, 2.99 mmol, 1.0 eq) and 3,5-dichloro-6-ethyl-N-methylpyrazine-2-carboxamide (699.80 mg, 2.99 mmol, 1.0 eq) in NMP (2 mL) was added DIPEA (7.73 g, 59.79 mmol, 20 eq), then the mixture was stirred at 140 °C for 10
hrs. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3).The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (3-(3-((6-chloro-5-ethyl-3- (methylcarbamoyl)pyrazin-2-yl)amino)-5-fluorophenoxy)propyl)carbamate (600 mg, 1.24 mmol, 41.64% yield) as a yellow oil. 1H NMR (400 MHz, CDCl3) δ = 11.18 (br s, 1H), 7.93 (br d, J = 2.9 Hz, 1H), 7.21 (br d, J = 11.0 Hz, 1H), 7.01 (br s, 1H), 6.33 (br d, J = 10.4 Hz, 1H), 4.75 (br s, 1H), 4.03 (br t, J = 5.8 Hz, 2H), 3.33 (br d, J = 5.6 Hz, 2H), 3.04 (br d, J = 5.0 Hz, 3H), 2.88 (q, J = 7.5 Hz, 2H), 2.04 - 1.95 (m, 2H), 1.46 (s, 9H), 1.30 (br t, J = 7.4 Hz, 3H). LC-MS (ES+, m/z): 482.3[(M+H)+]. Rt=1.005 min. Step 6: tert-butyl (3-(3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00765] To a solution of tert-butyl (3-(3-((6-chloro-5-ethyl-3-(methylcarbamoyl)pyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate (450 mg, 933.71 µmol, 1.0 eq) and N-methylmethanamine (421.05 mg, 5.16 mmol, 5.53 eq) in DMA (4 mL) was added DIEA (1.21 g, 9.34 mmol, 10.0 eq), then the mixture was stirred at 100 °C for 10 hrs in sealed tube. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (30 mL*1), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=10/1 to 1/1) to afford tert-butyl (3-(3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate (400 mg, 815.38 µmol, 87.33% yield) as a yellow oil. LC-MS (ES+, m/z): 491.4[(M+H)+]. Rt=0.994min. Step 7: 3-((3-(3-aminopropoxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6-ethyl-N- methylpyrazine-2-carboxamide
[00766] A mixture of tert-butyl (3-(3-((6-(dimethylamino)-5-ethyl-3-(methylcarbamoyl)pyrazin-2- yl)amino)-5-fluorophenoxy)propyl)carbamate (400 mg, 815.38 µmol, 1.0 eq) in HCl/EtOAc (4 M, 15 mL, 73.59 eq) was stirred at 25 °C for 1 h. LCMS showed the reaction was completed. The reaction mixture was concentrated in vacuum to afford 3-((3-(3-aminopropoxy)-5-fluorophenyl)amino)-5-
(dimethylamino)-6-ethyl-N-methylpyrazine-2-carboxamide (240 mg, 614.67 µmol, 75.38% yield) as a yellow solid. LC-MS(ES+, m/z): 391.3 [(M+H)+]. Rt=0.739 min. Note: HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 8: (E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide
[00767] To a solution of 3-((3-(3-aminopropoxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6-ethyl-N- methylpyrazine-2-carboxamide (240 mg, 614.67 µmol, 1 eq) and (E)-N-(4-(dimethylamino)but-2-enoyl)- N-methyl-L-alanine (263.40 mg, 1.23 mmol, 2.0q) in DMF (5 mL) was added BOP (407.78 mg, 922.00 µmol, 1.5 eq) and DIPEA (635.53 mg, 4.92 mmol, 8.eq) at 25 °C, the mixture was stirred at 25 °C for 10 hrs. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water (TFA)-ACN]; B%: 25%-55%, 8 min) to afford (E)-5-(dimethylamino)-3-((3-(3-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propoxy)-5-fluorophenyl)amino)-6-ethyl-N-methylpyrazine-2-carboxamide (60.85 mg, 16.72% yield, 99.12% purity) as a brown solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.37 (s, 1H), 9.896 (s, 1H), 8.36 (br d, J = 4.9 Hz, 1H), 7.96 (s, 1H), 7.32 (br d, J = 11.9 Hz, 1H), 6.99 - 6.90 (m, 1H), 6.84 (br d, J = 15.0 Hz, 1H), 6.59 (br d, J = 15.0 Hz, 1H), 6.37 (td, J = 2.1, 10.8 Hz, 1H), 4.97 (d, J = 7.2 Hz, 1H), 3.98 (br s, 2H), 3.90 - 3.83 (m, 2H), 3.24 - 3.17 (m, 2H), 3.06 (s, 6H), 2.96 (s, 2H), 2.82 (d, J = 4.8 Hz, 3H), 2.79 - 2.73 (m, 9H), 1.88 - 1.80 (m, 2H), 1.31 (d, J = 7.0 Hz, 1H), 1.27 - 1.22 (m, 5H). LC- MS(ES+,m/z): 587.4 M+H)+]. Rt=2.321. HRMS:587.3500. Example 60 (Compound 152) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-N-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylic acid
[00768] To a solution of methyl 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2- carboxylate (4 g, 13.34 mmol, 1 eq) in THF (8 mL) and H2O (2 mL) was added LiOH.H2O (2.80 g, 66.72 mmol, 5 eq). The mixture was stirred at 20 °C for 3 hrs. LCMS showed the reaction was completed. The reaction mixture was diluted with water 20 mL and extracted with EtOAc (40 mL * 2). The organic layers were discarded .The water layer was acidified to PH=2 with 1mol/L HCl and extracted with EtOAc (40 mL * 3). The combined organic layers were washed with Sat. brine(20 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The crude product was triturated with EtOAc (50 mL) at 25 oC for 10 min to give 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxylic acid (1 g, 3.39 mmol, 25.41% yield, 96.901% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 12.66 (br s, 1H), 7.21 (d, J = 7.7 Hz, 1H), 4.15 - 4.03 (m, 1H), 3.94 - 3.83 (m, 2H), 3.46 - 3.32 (m, 3H), 2.66 (q, J = 7.3 Hz, 2H), 1.81 - 1.58 (m, 4H), 1.17 (t, J = 7.4 Hz, 3H) ; LC-MS (ES+, m/z): 286.1[(M+H)+]; Rt=0.536 min. Step 2: 3-chloro-6-ethyl-N-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00769] To a solution of 3-chloro-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxylic acid.(950 mg, 3.32 mmol, 1 eq) in DMF (10 mL) was added HATU (1.52 g, 3.99 mmol, 1.2 eq) and DIEA (2.15 g, 16.62 mmol, 2.90 mL, 5 eq) and MeNH2 (336.73 mg, 4.99 mmol, 100% purity, 1.5 eq, HCl). The mixture was stirred at 20 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with sat. NaHCO3 (20 mL * 2) and Sat. brine (20 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to give 3- chloro-6-ethyl-N-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (800 mg, 2.68 mmol, 80.53% yield, 100% purity) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 8.14 (br d, J = 4.8 Hz, 1H), 8.08 - 7.85 (m, 1H), 7.08 - 7.00 (m, 1H), 4.11 - 3.85 (m, 3H), 3.46 - 3.36 (m, 2H), 2.89 (s, 1H), 2.74 (d, J = 4.8 Hz, 2H), 2.71 - 2.62 (m, 4H), 1.84 - 1.75 (m, 2H), 1.70 - 1.55 (m, 2H), 1.21 (t, J = 7.3 Hz, 3H) ; LC-MS (ES+, m/z): 299.0[(M+H)+]; Rt=1.347 min
Step 3: tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2- yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl) carbamate
[00770] A mixture of 3-chloro-6-ethyl-N-methyl-5-(tetrahydropyran-4-ylamino)pyrazine-2- carboxamide (200 mg, 669.42 µmol, 1 eq), tert-butyl (3-aminophenethyl)carbamate (205.65 mg, 870.24 µmol, 1.3 eq), XPhos (63.82 mg, 133.88 µmol, 0.2 eq), XPhos Pd G3 (113.32 mg, 133.88 µmol, 0.2 eq) and Cs2CO3 (1.09 g, 3.35 mmol, 5 eq) in 2-methyl-2-butanol (8 mL) was degassed and purged with N2 for 3 times, and then the mixture was stirred at 120 °C for 10 hrs under N2 atmosphere. LCMS showed the reaction was completed. The reaction mixture was poured into saturated EDTA(10 mL), EA(5 mL) and stirred 60 min. And then extracted with EtOAc (5 mL * 3). The combined organic layers were washed with sat. brine (20 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-TLC (SiO2, DCM: MeOH = 10:1) to give tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4-yl)amino)pyrazin-2-yl)amino)-5- methoxyphenethyl)amino)-3-oxopropyl)carbamate (220 mg, 256.78 µmol, 38.36% yield, 58.198% purity) as yellow solid. LC-MS (ES+, m/z): 499.4[(M+H)+]; Rt=0.900 min. Step 4: 3-((3-(2-(3-aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide
[00771] To a solution of tert-butyl (3-((3-((3-carbamoyl-5-ethyl-6-((tetrahydro-2H-pyran-4- yl)amino)pyrazin-2-yl)amino)-5-methoxyphenethyl)amino)-3-oxopropyl) carbamate (150 mg, 300.83 µmol, 1 eq) in MeOH (1 mL) was added HCl/MeOH (4 M, 5 mL). The mixture was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give 3-((3-(2-(3-aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro- 2H-pyran-4-yl)amino)pyrazine-2-carboxamide (145 mg, crude, HCl) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.46 - 11.12 (m, 1H), 8.15 - 8.09 (m, 1H), 7.97 - 7.76 (m, 2H), 7.50 - 7.39 (m, 1H), 7.29 - 7.21 (m, 2H), 6.88 - 6.81 (m, 1H), 3.98 - 3.93 (m, 1H), 3.98 - 3.90 (m, 2H), 3.44 - 3.36 (m, 1H), 3.10 - 2.95 (m, 4H), 2.94 - 2.78 (m, 5H), 2.61 (q, J = 7.3 Hz, 1H), 1.88 (br dd, J = 2.2, 12.7 Hz, 1H), 1.71 - 1.59 (m, 1H), 1.27 - 1.13 (m, 3H); LC-MS (ES+, m/z): 399.3[(M+H)+]; Rt=0.667 min
Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 5: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-N-methyl-5-((tetrahydro-2H-pyran-4- yl)amino)pyrazine-2-carboxamide
[00772] To a solution of 3-((3-(2-(3-aminopropanamido)ethyl)-5-methoxyphenyl)amino)-6-ethyl-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (100 mg, 229.91 µmol, 1.2 eq, HCl) in DMF (1 mL) was added DIEA (123.81 mg, 957.94 µmol, 166.86 µL, 5 eq) and BOP (101.68 mg, 229.91 µmol, 1.2 eq) and (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine propanoic acid (41.05 mg, 191.59 µmol, 1 eq). The mixture was stirred at 16 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (10 mL) at 25 °C, and then extracted with EtOAc (5 mL * 3). The combined organic layers were washed with sat. brine (20 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 10%-55%, 8min) to give (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-N-methyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (11.37 mg, 15.34 µmol, 8.00% yield, 95.6% purity, TFA) as white solid.1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.25 (s, 1H), 9.86 - 9.59 (m, 1H), 8.14 - 8.06 (m, 1H), 7.97 - 7.73 (m, 1H), 7.60 - 7.48 (m, 1H), 7.46 - 7.39 (m, 1H), 7.30 - 7.17 (m, 1H), 6.94 - 6.70 (m, 3H), 6.64 - 6.46 (m, 1H), 5.08 - 4.49 (m, 1H), 4.18 - 4.05 (m, 1H), 3.98 - 3.79 (m, 4H), 3.45 - 3.39 (m, 2H), 3.28 (br s, 2H), 2.93 - 2.86 (m, 2H), 2.85 - 2.66 (m, 12H), 2.64 - 2.58 (m, 2H), 1.88 (br d, J = 11.8 Hz, 2H), 1.73 - 1.59 (m, 2H), 1.32 - 1.16 (m, 6H) ; LC-MS (ES+, m/z): 595.5[(M+H)+]; Rt=2.163 min;95.6% purity; HRMS:595.3762. Example 61 (Compound 153) 5-(dimethylamino)-3-((3-(((S)-1-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propan-2-yl)oxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
Scheme 21
Step 1: 3-fluoro-5-nitrophenol
[00773] To a solution of 1-fluoro-3-methoxy-5-nitrobenzene (2 g, 11.69 mmol, 1 eq) in DCM (40 mL) at 0 °C was added a solution of BBr3 (8.78 g, 35.06 mmol, 3.38 mL, 3 eq) in DCM (10 mL). The mixture was stirred at 10 °C for 2 hrs. TLC indicated SM : Product =1:4. The mixture was cooled to 0 °C and concentrated in reduced pressure at 25 °C. The residue was poured into ice-water (w/w = 1/1) (20 mL) and stirred for 10 min. The aqueous phase was extracted with ethyl acetate (80 mL*3).The combined organic phase was washed with saturated brine (50 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 5/1) TLC (Rf= 0.32) to give 3-fluoro-5-nitrophenol (1.4 g, 8.91 mmol, 76.25% yield) as yellow solid. Step 2: tert-butyl (S)-(2-(3-fluoro-5-nitrophenoxy)propyl)carbamate
[00774] [0030] To a solution of 3-fluoro-5-nitrophenol (2.5 g, 15.91 mmol, 1 eq) and tert-butyl (R)-(2- hydroxypropyl)carbamate (3.35 g, 19.10 mmol, 1.2 eq) in THF (25 mL)was added PPh3 (6.26 g, 23.87 mmol, 1.5 eq), the mixture was stirred for 0.3 h, then DIAD (4.83 g, 23.87 mmol, 4.64 mL, 1.5 eq) was added to the mixture. The mixture was stirred at 25 °C for 10 hrs. LCMS showed the reaction was completed. The reaction was poured into water (70 mL) and extracted with EtOAc(50 mL *3). The
organic layers were combined, washed with water (50 mL*3) and saturated brine (20mL), dried with Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 4/1, Rf= 0.65) to give tert-butyl (S)-(2-(3- fluoro-5-nitrophenoxy)propyl)carbamate (3.5 g, 11.14 mmol, 69.98% yield) as yellow solid. LC-MS (ES+, m/z): 259.1 [(M+H)+]. Rt=0.867 min Step 3: tert-butyl (S)-(2-(3-amino-5-fluorophenoxy)propyl)carbamate
[00775] To a solution of tert-butyl (S)-(2-(3-fluoro-5-nitrophenoxy)propyl)carbamate (1.1 g, 3.50 mmol, 1 eq) and NH4Cl (561.62 mg, 10.50 mmol, 3 eq) in EtOH (15 mL) and H2O (7.5 mL) was added Fe (586.33 mg, 10.50 mmol, 3 eq) in portions at 80 °C. The mixture was stirred at 85 °C for 3 hrs. LCMS indicated the reaction was complete. The reaction was poured into water (50 mL) and extracted with EtOAc (30 mL*2). The organic layers were combined, washed with water (10 mL*2) and saturated brine (10 mL), dried with Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 4/1, Rf= 0.46) to give tert-butyl (S)-(2-(3-amino-5-fluorophenoxy)propyl)carbamate (740 mg, 2.60 mmol, 74.37% yield) as yellow solid. LC-MS (ES+, m/z): 229.1 [(M+H)+]. Rt=0.739 min Step 4: tert-butyl (S)-(2-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00776] To a solution of tert-butyl (S)-(2-(3-amino-5-fluorophenoxy)propyl)carbamate (740 mg, 2.60 mmol, 1 eq) and 3,5-dichloro-6-ethyl-pyrazine-2-carboxamide (572.73 mg, 2.60 mmol, 1 eq) in NMP (4 mL) was added DIPEA (6.73 g, 52.05 mmol, 9.07 mL, 20 eq). The mixture was stirred at 140 °C for 10 hrs. LCMS indicated the reaction was complete. The reaction was poured into water (30 mL) and extracted with EtOAc (20 mL*2). The organic layers were combined, washed with water (10 mL*2) and saturated brine (10mL), dried with anhydrous Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1, Rf= 0.42) to give tert-butyl (S)-(2-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate (300 mg, 641.13 µmol, 24.63% yield) as yellow solid. LC-MS (ES+, m/z): 490.4 [(M+Na)+]. Rt=0.888 min.
Step 5: tert-butyl (S)-(2-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00777] To a solution of tert-butyl (S)-(2-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate (380 mg, 812.10 µmol, 1 eq) and Me2NH (662.23 mg, 8.12 mmol, 744.07 µL, 10 eq, HCl) in DMA (5 mL) was added DIEA (1.05 g, 8.12 mmol, 1.41 mL, 10 eq) at 25 °C. The mixture was stirred at 100 °C for 10 hrs in sealed tube. LCMS indicated the reaction was complete. The reaction was poured into water (20 mL) and extracted with EtOAc (15 mL*2). The organic layers were combined, washed with water (10 mL*2) and saturated brine (10mL), dried with Na2SO4, filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1, Rf= 0.79) to give tert-butyl (S)-(2-(3-((3-carbamoyl-6- (dimethylamino)-5-ethylpyrazin-2-yl)amino)-5-fluorophenoxy)propyl)carbamate (350 mg, 734.46 µmol, 90.44% yield) as yellow solid. LC-MS (ES+, m/z): 477.4 [(M+H)+]. Rt=0.952 min Step 6: (S)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6- ethylpyrazine-2-carboxamide
[00778] To a solution of tert-butyl (S)-(2-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)-5-fluorophenoxy)propyl)carbamate (350 mg, 734.46 µmol, 1 eq) in HCl/MeOH (4 M, 20 mL). The mixture was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give (S)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)- 5-(dimethylamino)-6-ethylpyrazine-2-carboxamide (260 mg, crude) as yellow solid. LC-MS (ES+, m/z): 377.4 [(M+H)+]. Rt=0.687 min Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 7: 5-(dimethylamino)-3-((3-(((2S)-1-(2-((E)-4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propan-2-yl)oxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
[00779] A mixture of (S)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6- ethylpyrazine-2-carboxamide (260 mg, 690.70 µmol, 1 eq) and (E)-N-(4-(dimethylamino)but-2-enoyl)-N- methyl-L-alanine (443.97 mg, 2.07 mmol, 3 eq) in DMF (4 mL) was added BOP (610.97 mg, 1.38 mmol, 2 eq) and DIEA (714.15 mg, 5.53 mmol, 8 eq), and then the mixture was stirred at 25 °C for 2 hrs. Filtered to give filtrate. The crude was purified by prep-HPLC (column:Phenomenex Luna 80*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 15%-45%, 8 min) to afford compound 5- (dimethylamino)-3-((3-(((2S)-1-(2-((E)-4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propan- 2-yl)oxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide (66.54 mg, 116.19 µmol, 16.82% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.31 (s, 1H), 9.75 (br s, 1H), 8.27 - 8.02 (m, 1H), 7.80 (br d, J = 1.9 Hz, 1H), 7.52 (br d, J = 1.8 Hz, 1H), 7.40 - 7.29 (m, 1H), 6.97 - 6.88 (m, 1H), 6.88 - 6.77 (m, 1H), 6.65 - 6.49 (m, 1H), 6.48 - 6.40 (m, 1H), 5.05 - 4.57 (m, 1H), 4.56 - 4.44 (m, 1H), 3.95 - 3.78 (m, 2H), 3.31 - 3.13 (m, 2H), 3.08 (s, 6H), 2.95 - 2.90 (m, 2H), 2.80 - 2.70 (m, 9H), 1.29 - 1.17 (m, 9H). LC-MS (ES+, m/z): 573.3[(M+H)+]. Rt=2.222 min. HRMS (EI): m/z [M+H]+ found:573.3360. Example 63 (Compound 155) 5-(dimethylamino)-3-((3-(((2R)-1-(2-((E)-4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propan-2-yl)oxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: 3-fluoro-5-nitro-phenol
[00780] To a solution of 1-fluoro-3-methoxy-5-nitro-benzene (6 g, 35.06 mmol, 1 eq) in DCM (60 mL) was added tribromoborane (26.35 g, 105.19 mmol, 10.14 mL, 3 eq) at 0 °C. The mixture was stirred at 10 °C for 5 hrs. TLC indicated the reaction was completed. The reaction mixture was quenched by addition MeOH (200 mL) at 0 °C as dropwise, and then the mixture was concentrated to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 50/1) to offer compound 3-fluoro-5-nitro-phenol (5 g, 28.64 mmol, 81.70% yield, 90% purity) as a yellow solid. LC-MS (ES+, m/z): 180.4[(M+23)+]. Rt=0.612 min. Step 2: tert-butyl (R)-(2-(3-fluoro-5-nitrophenoxy)propyl)carbamate
[00781] To a solution of 3-fluoro-5-nitro-phenol (3.1 g, 19.73 mmol, 1 eq) in THF (30 mL) was added tert-butyl (S)-(2-hydroxypropyl)carbamate (4.15 g, 23.68 mmol, 1.2 eq) and PPh3 (7.76 g, 29.60 mmol, 1.5 eq) at 0 °C. The mixture was stirred for 10 min, then DIAD (5.99 g, 29.60 mmol, 5.75 mL, 1.5 eq) was added, the mixture was stirred for 5 hrs at 25 °C. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (200 mL) at 20 °C, and then extracted with EtOAc (100 mL * 3). The combined organic layers were washed with saturated brine (50 mL), dried over Na2SO4, filtered and concentrated to give the residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 30/1) to give compound tert-butyl (R)-(2-(3-fluoro-5- nitrophenoxy)propyl)carbamate (5.5 g, 14.87 mmol, 75.38% yield, 85% purity) as a yellow solid. 1H NMR (400 MHz, CDCl3) δ = 7.61 - 7.56 (m, 1H), 7.54 - 7.49 (m, 1H), 6.96 (br d, J = 9.8 Hz, 1H), 4.91 (br s, 1H), 4.58 (br d, J = 3.8 Hz, 1H), 3.55 - 3.43 (m, 1H), 3.35 - 3.24 (m, 1H), 1.44 (s, 9H), 1.36 - 1.31 (m, 3H). LC-MS (ES+, m/z): 259.1[(M+H-56)+]. Rt=0.875 min. Step3: tert-butyl (R)-(2-(3-amino-5-fluorophenoxy)propyl)carbamate
[00782] To a solution of tert-butyl (R)-(2-(3-fluoro-5-nitrophenoxy)propyl)carbamate (5.5 g, 17.50 mmol, 1 eq) in EtOH (25 mL) and H2O (25 mL) was added Fe (9.77 g, 174.99 mmol, 10 eq) and NH4Cl (9.36 g, 174.99 mmol, 10 eq) at 25 °C. The mixture was stirred 2 hrs at 80 °C. LC-MS showed the reaction was completed. The reaction mixture was diluted with EtOAc (300 mL) and filtered, the filtration was concentrated to give a residue. The residue was diluted with DCM (300 mL) and washed with saturated brine (50 mL*2), dried over Na2SO4, filtered and concentrated to give tert-butyl (R)-(2-(3- amino-5-fluorophenoxy)propyl)carbamate (4 g, crude) as a brown gum. 1H NMR (400 MHz, CDCl3) δ = 5.99 (br s, 3H), 4.96 (br s, 1H), 4.37 (br s, 1H), 4.10 (br s, 2H), 3.79 (br s, 1H), 3.41 (br s, 1H), 3.19 (br s, 1H), 2.03 (br s, 3H), 1.43 (br s, 9H). LC-MS (ES+, m/z): 229.1 [(M-55)]. Rt=0.739 min.
Step 4: tert-butyl (R)-(2-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00783] To a solution of tert-butyl (R)-(2-(3-amino-5-fluorophenoxy)propyl)carbamate (2 g, 7.03 mmol, 1 eq) in NMP (30 mL) was added 3,5-dichloro-6-ethylpyrazine-2-carboxamide (1.55 g, 7.03 mmol, 1 eq) and DIEA (18.18 g, 140.68 mmol, 24.50 mL, 20 eq) at 25 °C. The mixture was stirred 24 hrs at 140 °C. LC-MS showed ~12% Reactant 1 was consumed and one main peak with desired m/z was detected. The reaction mixture was quenched by addition water (200 mL) at 25 °C, and then extracted with EtOAc (100 mL * 3). The combined organic layers were washed with saturated brine (50 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 10/1) to give tert-butyl (R)-(2-(3-((3- carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5-fluorophenoxy)propyl)carbamate (1.5 g, crude) as a yellow solid. LC-MS (ES+, m/z): 468.2[(M+H)+]. Rt=0.977 min. Step 5: tert-butyl (R)-(2-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate
[00784] To a solution of tert-butyl (R)-(2-(3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenoxy)propyl)carbamate (600 mg, 1.28 mmol, 1 eq) in DMA (5 mL) was added N- methylmethanamine (1.05 g, 12.82 mmol, 1.17 mL, 10 eq, HCl) and DIEA (2.15 g, 16.67 mmol, 2.90 mL, 13 eq) at 25 °C. The mixture was stirred at 100 °C for 10 hrs in sealed tube. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (20 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-TLC (SiO2, PE: EtOAc = 1:1) to give compound tert-butyl (R)-(2-(3-((3- carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5-fluorophenoxy) propyl)carbamate (380 mg, 725.64 µmol, 56.59% yield, 91% purity) as a yellow solid. 1H NMR (400 MHz, CDCl3) δ = 10.89 (s, 1H), 7.58 (br s, 1H), 7.39 (br d, J = 11.7 Hz, 1H), 6.91 (br s, 1H), 6.27 (td, J = 2.2, 10.5 Hz, 1H), 5.26 (br s, 1H), 5.03 - 4.79 (m, 1H), 4.53 - 4.32 (m, 1H), 3.55 - 3.45 (m, 1H), 3.27 - 3.17 (m, 1H), 3.12 (s, 6H), 2.81-
2.75 (q, J = 7.4 Hz, 2H), 1.45 (s, 9H), 1.34 - 1.21 (m, 9H). LC-MS (ES+, m/z): 477.5 [(M+H)+]. Rt=0.870 min. Step 6: (R)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6- ethylpyrazine-2-carboxamide hydrochloride
[00785] To a solution of tert-butyl (R)-(2-(3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)-5-fluorophenoxy)propyl)carbamate (380 mg, 797.41 µmol, 1 eq) in MeOH (0.5 mL) was added HCl/MeOH (4 M, 199.35 µL, 1 eq) at 25 °C. The mixture was stirred 2 hrs at 25 °C. LC-MS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to remove solvent to give compound (R)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)-5-(dimethylamino)-6- ethylpyrazine-2-carboxamide hydrochloride (340 mg, crude, HCl) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.34 (s, 1H), 8.27 (br s, 3H), 7.82 - 7.52 (m, 1H), 7.48 - 7.37 (m, 1H), 6.96 - 6.88 (m, 1H), 6.55 - 6.45 (m, 1H), 4.80 - 4.60 (m, 1H), 3.15 - 3.11 (m, 2H), 3.07 (s, 6H), 2.85 - 2.72 (m, 2H), 1.30 - 1.20 (m, 6H). LC-MS (ES+, m/z): 377.3[(M+H)+]. Rt=0.677 min. Note:HCl/ MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/ MeOH (4 M) Step 7: 5-(dimethylamino)-3-((3-(((2R)-1-(2-((E)-4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propan-2-yl)oxy)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
[00786] To a solution of (R)-3-((3-((1-aminopropan-2-yl)oxy)-5-fluorophenyl)amino)-5- (dimethylamino)-6-ethylpyrazine-2-carboxamide hydrochloride (170 mg, 411.73 µmol, 1 eq, HCl) in DMF (1 mL) was added (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methyl-L-alanine (202.75 mg, 617.60 µmol, 1.5 eq, TFA), BOP (218.52 mg, 494.08 µmol, 1.2 eq) and DIEA (319.28 mg, 2.47 mmol, 430.30 µL, 6 eq) at 16 °C. The mixture was stirred for 2 hrs at 16 °C. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (20 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water ( NH4HCO3)-ACN]; B%: 35%-65%, 10 min) to give compound 5-(dimethylamino)-3-((3-(((2R)-1-(2-((E)- 4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propan-2-yl)oxy)-5-fluorophenyl)amino)-6-
ethylpyrazine-2-carboxamide (60.04 mg, 99.46 µmol, 24.16% yield, 94.87% purity) as a white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.56 - 11.19 (m, 1H), 8.28 - 7.92 (m, 1H), 7.84 - 7.73 (m, 1H), 7.60 - 7.50 (m, 1H), 7.35 - 7.27 (m, 1H), 6.99 - 6.90 (m, 1H), 6.81 - 6.20 (m, 3H), 5.05 - 4.57 (m, 1H), 4.55 - 4.44 (m, 1H), 3.24 - 3.12 (m, 2H), 3.10 - 3.06 (m, 6H), 3.03 - 2.94 (m, 2H), 2.94 - 2.83 (m, 3H), 2.80 - 2.75 (m, 2H), 2.17 - 2.05 (m, 6H), 1.28 - 1.18 (m, 9H). LC-MS (ES+, m/z): 573.3[(M+H)+]. Rt=2.788 min. Example 64 (Compound 156) Scheme 22
Step 1: tert-butyl (E)-N-(4-bromobut-2-enoyl)-N-methyl-L-alaninate
[00787] To a mixture of tert-butyl methyl-L-alaninate hydrochloride (9 g, 45.99 mmol, 1 eq) and (E)-4- bromobut-2-enoic acid (8.35 g, 50.59 mmol, 1.1 eq) in DMF (90 mL) was added 2-bromo-1-ethyl- pyridin-1-ium;tetrafluoroborate (18.89 g, 68.99 mmol, 1.5 eq) and DIEA (59.44 g, 459.92 mmol, 80.11 mL, 10 eq) in one portion at 20 °C under N2. The mixture was stirred at 20 °C for 1 hr. LCMS indicated the reaction was completed. The residue was poured into water (200 mL). The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine (400 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2,Petroleum ether : Ethyl acetate=30/1 to 1 /1). To afford the title compound tert-butyl (E)-N-(4-bromobut-2-enoyl)-N-methyl-L-alaninate (8 g, 26.13 mmol, 28.40% yield) as a yellow oil. LC-MS (ES+, m/z): 206.3 [(M+H)+]. Rt=1.837 min.
Step 2: tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alaninate
[00788] To a mixture of tert-butyl (E)-N-(4-bromobut-2-enoyl)-N-methyl-L-alaninate (8 g, 26.13 mmol, 1 eq) and azetidine hydrochloride (2.44 g, 26.13 mmol, 1 eq) in DMF (80 mL) was added DIPEA (10.13 g, 78.38 mmol, 3 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was completed. The reaction mixture was filtrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether: Ethyl acetate=1/1 to 1/1). To afford the title compound tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alaninate (550 mg, 1.95 mmol, 2.48% yield) as a yellow oil. LC-MS (ES+, m/z): 283.4 [(M+H)+]. Rt=0.546 min Step 3: (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alanine
[00789] To a mixture of tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alaninate (500 mg, 1.77 mmol, 1 eq) in DCM (1.5 mL) was added TFA (77.00 g, 675.30 mmol, 50.00 mL, 381.38 eq) in one portion at 20 °C under N2. The mixture was stirred at 20 °C for 1 hr. LCMS indicated the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. To afford the title compound (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alanine (480 mg, crude) as a yellow oil. LC-MS (ES+, m/z): 227.3 [(M+H)+]. Rt=0.177 min. Step 4: (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide
[00790] To a mixture of (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alanine propanoic acid (109.44 mg, 483.66 µmol, 2 eq) and 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2- carboxamide (100 mg, 241.83 µmol, 1 eq) in DMF (2 mL) was added BOP (160.43 mg, 362.74 µmol, 1.5 eq) and DIPEA (312.55 mg, 2.42 mmol, 421.22 µL, 10 eq) in one portion at 25 °C under N2.The mixture was stirred at 25 °C for 4 hrs LCMS indicated the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (TFA condition).column: C18-1150*30 mm*5 µm; mobile phase: [water(TFA)-ACN];B%: 10%-55%,8 min. To afford the title compound (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide (25.1 mg, 45.85 µmol, 18.96% yield) as a brown solid.1H NMR (400 MHz, DMSO-d6,TFA) δ = 11.22 - 11.07 (m, 1H), 10.02 - 9.71 (m, 1H), 8.11 - 7.86 (m, 1H), 7.79 - 7.72 (m, 1H), 7.56 - 7.42 (m, 3H), 7.26 - 7.15 (m, 1H), 6.82 - 6.67 (m, 2H), 6.52 - 6.19 (m, 1H), 4.97 - 4.56 (m, 1H), 4.14 (br d, J = 6.2 Hz, 2H), 4.00 -3.98 (m, 4H), 3.35 - 3.24 (m, 2H), 3.09 - 3.04 (m, 6H), 2.92 - 2.86 (m, 2H), 2.80 - 2.67 (m, 6H), 2.44 - 2.35 (m, 2H), 1.28 - 1.19 (m, 6H). 1H NMR (400 MHz, D2O) δ = 7.55 - 7.39 (m, 1H), 7.26 - 7.05 (m, 2H), 6.80 (br d, J = 7.3 Hz, 1H), 6.58 - 6.40 (m, 1H), 6.38 (s, 1H), 4.85 - 4.41 (m, 1H), 4.31 - 4.07 (m, 2H), 4.05 - 3.86 (m, 2H), 3.84 - 3.59 (m, 2H), 3.53 - 3.27 (m, 2H), 3.05 - 2.93 (m, 6H), 2.79 - 2.62 (m, 7H), 2.58 - 2.29 (m, 2H), 1.32 - 1.12 (m, 6H) LC-MS (ES+, m/z): 537.3 [(M+H)+]. Rt=2.117 min. HRMS (EI): m/z [M]+ found: 537.3306. Example 65 (Compound 158) (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00791] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 956.03 µmol, 1 eq) in DMA (5 mL) was added DIPEA (1.24 g, 9.56 mmol, 1.67 mL, 10 eq) and dimethylamine (779.58 mg, 9.56 mmol, 875.94 µL, 10 eq, HCl).The mixture was stirred at 100 °C for 10 hrs in sealed tube. LC-MS showed the reaction was completed. The reaction mixture was poured into H2O (5 mL) and extracted with EA (10 mL * 3). The combined organic layers were washed with saturated brine (10 mL *3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/5) to afford tert-butyl (S)-(1-((3- ((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2-yl)amino)-5-fluorophenethyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (300 mg, 564.31 µmol, 59.03% yield) as yellow oil.1H NMR (400 MHz, DMSO-d6) δ = 11.38 - 11.23 (m, 1H), 7.87 - 7.73 (m, 2H), 7.72 - 7.60 (m, 1H), 7.58 - 7.47 (m, 1H), 7.17 - 7.05 (m, 1H), 6.68 - 6.55 (m, 1H), 4.57 - 4.22 (m, 1H), 3.17 (d, J = 5.3 Hz, 2H), 3.07 (s, 5H), 2.79 - 2.74 (m, 4H), 2.71 - 2.68 (m, 4H), 1.40 - 1.20 (m, 15H).LC-MS (ES+, m/z): 532.3 [(M+H)+]; Rt=0.886 min. Step 2: (S)-5-(dimethylamino)-6-ethyl-3-((3-fluoro-5-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00792] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)-5-fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (300 mg, 564.31 µmol, 1 eq), in HCl/MeOH (4 M, 48.70 mL, 345.21 eq) was stirred at 25 °C for 2 hrs. LC-MS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford (S)-5- (dimethylamino)-6-ethyl-3-((3-fluoro-5-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide (287.4 mg, crude, HCl) was obtained as a yellow oil (150 mg, crude) as yellow oil. LC- MS (ES+, m/z): 432.2[(M+H)+]; Rt=0.755 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
[00793] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-fluoro-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (287 mg, 665.11 µmol, 1 eq) in
DMF (4 mL) was added BOP (441.25 mg, 997.67 µmol, 1.5 eq), DIPEA (1.60 g, 12.40 mmol, 2.16 mL, 18.64 eq) and (E)-4-(dimethylamino)but-2-enoic acid (352.36 mg, 2.73 mmol, 4.10 eq).The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC(column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 20%-50%,8min) to afford (S,E)-5- (dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)-5- fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide (246 mg, 449.25 µmol, 67.55% yield, 99.10% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6, TFA) δ = 11.37 - 11.24 (m, 1H), 9.65 (br s, 1H), 8.14 - 7.86 (m, 1H), 7.79 (br s, 1H), 7.73 - 7.66 (m, 1H), 7.52 (br s, 1H), 7.08 (s, 1H), 6.86 - 6.75 (m, 1H), 6.65 - 6.46 (m, 2H), 4.96 - 4.55 (m, 1H), 3.91 - 3.86 (m, 2H), 3.33 - 3.24 (m, 2H), 3.10 - 3.06 (m, 6H), 2.89 (s, 2H), 2.77 (br d, J = 7.3 Hz, 7H), 2.73 - 2.66 (m, 4H), 1.28 - 1.19 (m, 6H). LC-MS (ES+, m/z): 543.3[(M+H)+]; Rt=2.200 min; 99.10% purity; HRMS:543.3200. Example 66 (Compound 159) Scheme 23
(S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)-5- fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00794] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (500 mg, 956.03 µmol, 1 eq) in DMA (4 mL) and H2O (2 mL) was added Pd(dppf)Cl2 (69.95 mg, 95.60 µmol, 0.1 eq), cyclopropylboronic acid (821.20 mg, 9.56 mmol, 10 eq) and K2CO3 (396.39 mg, 2.87 mmol, 3 eq) at 25 °C. The mixture was stirred at 100 °C for 10 hrs. LCMS showed the reaction was completed. The reaction mixture was poured into saturated EDTA(10 mL), EA(5 mL) and stirred 60 min, and then extracted with EA (5 mL*3). The combined organic layers were washed with saturated brine (10 mL*3), dried over anhydrous Na2SO4, filter and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert-butyl (S)-(1-((3-((3- carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)-5-fluorophenethyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (70 mg, 132.42 µmol, 13.85% yield) as yellow oil. LC-MS (ES+, m/z): 529.3[(M+H)+]; Rt=0.904 min. Step 2: (S)-5-cyclopropyl-6-ethyl-3-((3-fluoro-5-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)pyrazine-2-carboxamide
[00795] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)-5- fluorophenethyl)amino)-1-oxopropan-2-yl)(methyl) carbamate (310 mg, 586.44 µmol, 1 eq) and TFA (2.45 g, 21.47 mmol, 1.59 mL, 36.61 eq) in DCM (5 mL) was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford (S)-5-cyclopropyl-6-ethyl-3-((3-fluoro-5-(2-(2-(methylamino)propanamido)ethyl)phenyl) amino)pyrazine-2-carboxamide (440 mg, crude, TFA) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.28 - 11.19 (m, 1H), 8.79 - 8.67 (m, 2H), 8.54 - 8.47 (m, 1H), 8.18 (br s, 1H), 7.93 - 7.84 (m, 1H), 7.63 (br d, J = 11.9 Hz, 1H), 7.07 - 7.00 (m, 1H), 6.68 (br d, J = 8.8 Hz, 1H), 3.70 - 3.64 (m, 1H), 3.51 - 3.35 (m, 2H), 2.93 - 2.90 (m, 1H), 2.79 - 2.72 (m, 2H), 2.70 - 2.67 (m, 1H), 2.45 - 2.43 (m, 3H), 1.30 - 1.26 (m, 6H), 1.13 (br s, 2H), 1.09 - 1.05 (m, 2H). LC-MS (ES+, m/z): 429.3[(M+H)+]; Rt=0.744 min; 91.31% purity.
Step 3: (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-ethylpyrazine-2-carboxamide
[00796] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-fluoro-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (220 mg, 405.51 µmol, 1 eq, TFA) and (E)-4-(dimethylamino)but-2-enoic acid in DMF (2 mL) was added BOP (269.02 mg, 608.27 µmol, 1.5 eq), DIPEA (524.10 mg, 4.06 mmol, 706.33 µL, 10 eq).The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 20%-50%,8min) to afford (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)- N-methylbut-2-enamido) propanamido)ethyl)-5-fluorophenyl) amino)-6-ethylpyrazine-2-carboxamide (60.81 mg, 106.44 µmol, 26.25% yield, 94.46% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.23 (br s, 1H), 9.79 - 9.57 (m, 1H), 8.50-8.18 (m, 1H), 8.06 -7.93 (m, 2H), 7.91 - 7.88 (m, 1H), 7.01- 7.09 (m, 1H), 6.83-6.79 (m, 1H), 6.65-6.60 (m, 2H), 5.08 - 4.49 (m, 1H), 3.97 - 3.78 (m, 2H), 3.51 - 3.39 (m, 2H), 2.94 - 2.88 (m, 4H), 2.79 - 2.68 (m, 9H), 2.36 - 2.29 (m, 1H), 1.38 - 1.23 (m, 6H), 1.15 - 1.05 (m, 4H). LC-MS (ES+, m/z): 540.2[(M+H)+]; Rt=2.261 min;94.46 purity; HRMS:540.3116. Example 67 (Compound 160) Scheme 24
(S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N-methylbut-2-ynamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl N-(but-2-ynoyl)-N-methyl-L-alaninate
[00797] To a solution of tert-butyl methyl-L-alaninate (3 g, 15.33 mmol, 1 eq, HCl) and but-2-ynoic acid (1.42 g, 16.86 mmol, 1.1 eq) in DMF (30 mL) was added HATU (8.74 g, 23.00 mmol, 1.5 eq) and DIPEA (19.81 g, 153.31 mmol, 26.70 mL, 10 eq).The mixture was stirred at 25 °C for 10 hrs. LCMS showed the reaction was completed. The reaction was poured into water (30 mL) and extracted with EtOAc(40 mL*3). The organic layers were combined, washed with water (10 mL*3), sat. brine (10 mL*3), dried with anhydrous Na2CO3, filtered and concentrated to give crude product. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert-butyl N-(but-2-ynoyl)-N-methyl-L-alaninate (3.2 g, 13.91 mmol, 90.76% yield, 97.96% purity) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 4.98 - 4.67 (m, 1H), 3.17 - 3.05 (m, 2H), 2.73 (s, 1H), 2.02 (d, J = 12.6 Hz, 3H), 1.45 - 1.25 (m, 12H); LC-MS (ES+, m/z): 226.1[(M+H)+]; Rt=0.885 min; Step 2: 6-ethyl-3-((3-methoxy-5-(2-(3-propiolamidopropanamido)ethyl)phenyl)amino)-5- ((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00798] A mixture of tert-butyl N-(but-2-ynoyl)-N-methyl-L-alaninate (1.6 g, 7.10 mmol, 1 eq) and TFA (7.70 g, 67.53 mmol, 5 mL, 9.51 eq) in DCM (5 mL) was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford N-(but-2-ynoyl)-N-methyl-L-alanine (1.84 g, crude, TFA) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 12.91 (m, 1H), 5.04 - 4.75 (m, 1H), 3.07 – 2.51 (m, 3H), 2.03 - 2.00 (m, 3H), 1.38 -1.28 (m, 3H); LC-MS (ES+, m/z): 170.0[(M+H)+]; Rt=1.452 min; 98.93% purity; HRMS:170.0775. Step 3: (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N-methylbut-2-ynamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00799] To a solution of N-(but-2-ynoyl)-N-methyl-L-alanine (150 mg, 158.90 µmol, 1 eq, TFA) and 3- ((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide (104.37 mg, 317.80 µmol, 2 eq) in DMF (1 mL) was added BOP (105.42 mg, 238.35 µmol, 1.5 eq) and DIPEA (205.36 mg, 1.59 mmol, 276.77 µL, 10 eq).The mixture was stirred at 25 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 30%-60%,8min) to afford (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N-methylbut-2-ynamido)propanamido)ethyl) phenyl)amino)pyrazine-2-carboxamide (73 mg, 122.75 µmol, 77.25% yield, 99.81% purity, TFA) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.10 (d, J = 2.7 Hz, 1H), 7.92 (s, 1H), 7.73 (br s, 1H), 7.56 (s, 1H), 7.53 - 7.40 (m, 2H), 7.20 (dt, J = 1.8, 7.8 Hz, 1H), 6.78 (br d, J = 7.5 Hz, 1H), 4.84 (dd, J = 7.2, 18.9 Hz, 1H), 3.34 - 3.24 (m, 2H), 3.06 (s, 7H), 2.98 (s, 2H), 2.69 - 2.65 (m, 4H), 1.99 (d, J = 16.8 Hz, 3H), 1.30 - 1.18 (m, 6H). LC-MS (ES+, m/z): 480.2[(M+H)+]; Rt=2.607 min; HRMS:480.2737. Example 68 (Compound 162)
(S,Z)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-2-fluoro-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide Step 1: ethyl (Z)-4-(dimethylamino)-2-fluorobut-2-enoate
[00800] To a solution of ethyl 2-diethoxyphosphoryl-2-fluoro-acetate (10 g, 41.29 mmol, 8.40 mL, 1 eq) in DCM (100 mL) was added DBU (31.43 g, 206.46 mmol, 31.12 mL, 5 eq) at 0°C. After addition, the mixture was stirred at this temperature for 30min, and then 2-(dimethylamino)acetaldehyde (10.48 g, 61.94 mmol, 1.5 eq, H2SO3) was added at 0°C. The resulting mixture was stirred at 25 °C for 10 hrs. HPLC showed the reaction was completed. The reaction mixture was quenched by addition sat. NH4Cl (200 mL) at 0 °C, and then extracted with DCM (100 mL * 3). The combined organic layers were washed with sat. brine (50 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give ethyl (Z)-4-(dimethylamino)-2-fluoro-but-2-enoate (4 g, crude) as yellow oil. LC-MS (ES+, m/z): 176.4 [(M+H)+]. Rt=0.247 min Step 2: (Z)-4-(dimethylamino)-2-fluorobut-2-enoic acid
[00801] To a solution of ethyl (Z)-4-(dimethylamino)-2-fluoro-but-2-enoate (1 g, 5.71 mmol, 1 eq) in THF (10 mL) and H2O (1 mL) was added LiOH.H2O (718.55 mg, 17.12 mmol, 3 eq) at 0 °C. After addition, the mixture was stirred at 25 °C for 2hrs. LC-MS showed the reaction was completed. The reaction mixture was neutralized with 1M HCl and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18100*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 95%-70%,10min) to give compound (Z)-4-(dimethylamino)-2-fluorobut-2-enoic acid (620 mg, 4.21 mmol, 73.82% yield) as a white solid.. LC-MS (ES+, m/z): 148.3[(M+H)+]. Rt=0.183 min.
Step 3: (S,Z)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-2-fluoro-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00802] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (S,Z)-5-(dimethylamino)-3-((3-(2-(2-(methylamino)-propanamido)ethyl)phenyl)amino)-6-ethylpyrazine- 2-carboxamide (100 mg, 241.83 µmol, 1.0 eq), (Z)-4-(dimethylamino)-2-fluorobut-2-enoic acid (284.68 mg, 1.93 mmol, 8.0 eq) in DMF (3 mL), BOP (160.43 mg, 362.74 µmol, 1.5 eq) and DIPEA (312.54 mg, 2.42 mmol, 10 eq) was added, the mixture was stirred at 10 °C for 10 hours. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (column: Phenomenex C18 75*30mm*3um;mobile phase: [water( NH4HCO3 )-ACN]; B%: 35%-65%,8min) to afford (S,Z)-5- (dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-2-fluoro-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide (13.41 mg, 24.61 µmol, 10.17% yield) as a brown solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.12 - 11.09 (m, 1H), 7.98 (br d, J = 5.4 Hz, 1H), 7.74 (br d, J = 2.5 Hz, 1H), 7.56 (s, 1H), 7.49 - 7.42 (m, 2H), 7.20 (t, J = 7.8 Hz, 1H), 6.79 (d, J = 7.6 Hz, 1H), 5.76 - 5.45 (m, 1H), 4.82 - 4.25 (m, 1H), 3.31 - 3.24 (m, 2H), 3.06 (s, 6H), 3.05 - 3.02 (m, 2H), 2.92 - 2.82 (m, 2H), 2.79 - 2.80 (m, 3H), 2.70 (br t, J = 7.2 Hz, 2H), 2.16 - 2.13 (f, 6H), 1.22 - 1.17 (t, J = 7.4 Hz, 6H). LC-MS (ES+, m/z): 543.4 [(M+H)+]; Rt=2.894 min; HRMS:543.3257. Example 69 (Compound 164) (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: methyl (E)-4-(bis(methyl-d3)amino)but-2-enoate
[0006] To a solution of DIEA (4.04 g, 31.28 mmol, 5.45 mL, 2.8 eq) bis(methyl-d3)amine (1.96 g, 22.34 mmol, 2 eq) and NaI (5.86 g, 39.10 mmol, 3.5 eq) in DMA (10 mL) at 0 °C, a solution of methyl (E)-4- bromobut-2-enoate (2 g, 11.17 mmol, 1.32 mL, 1 eq) in DMA (10 mL) was added dropwise to the solution . The mixture was stirred at 0 °C for 1 hr, then allowed to warm to 16 °C stirred for 9 hrs. LCMS showed the reaction was completed. The reaction was poured into water (40 ml) and extracted with DCM: MeOH=10:1 (30 mL*3). The organic layers were combined, washed with water (10 ml*2), saturated brine (20 mL*3), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (DCM/MeOH = 20/1) to give methyl (E)-4-(bis(methyl-d3)amino)but- 2-enoate (240 mg, 1.61 mmol, 14.40% yield) as yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 6.81 (td, J = 6.9, 15.6 Hz, 1H), 6.25 (td, J = 1.3, 15.6 Hz, 1H), 3.79 (dd, J = 0.8, 6.8 Hz, 2H), 3.70 (s, 3H). LC-MS (ES+, m/z): 150.2 [(M+H)+]. Rt=0.447 min. Step 2: lithium (E)-4-(bis(methyl-d3)amino)but-2-enoate
[0007] A mixture of methyl (E)-4-(bis(methyl-d3)amino)but-2-enoate (240 mg, 1.61 mmol, 1 eq), LiOH.H2O (202.46 mg, 4.83 mmol, 3 eq) and MeOH (1.5 mL) in H2O (0.5 mL) was stirred at 15 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was concentrated under reduced pressure to give lithium (E)-4-(bis(methyl-d3)amino)but-2-enoate (200 mg, 1.42 mmol, 88.11% yield) as yellow solid. LC-MS (ES+, m/z): 136.2 [(M+H)+]. Rt=0.242 min. Step 3: (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00803] To a solution of lithium (E)-4-(bis(methyl-d3)amino)but-2-enoate (176.02 mg, 1.25 mmol, 1.5 eq) and DIEA (1.07 g, 8.31 mmol, 1.45 mL, 10 eq) in DMF (2 mL) was added (S)-6-ethyl-5-methyl-3-((3-
(2-(2-(methylamino)propanamido)ethyl)phenyl) amino)pyrazine-2-carboxamide (350 mg, 831.48 µmol, 1 eq, HCl) , and then BOP (551.62 mg, 1.25 mmol, 1.5 eq) was added at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction was concentrated. The crude was purified by prep-HPLC( column: C18-1150*30mm*5um;mobile phase: [water( NH4HCO3)-MeCN];B%: 25%-55%, 20 min) to give (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (75.37 mg, 150.24 µmol, 18.07% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.02 (s, 1H), 8.14 (s, 1H), 7.86 - 7.78 (m, 2H), 7.63 (br d, J = 7.9 Hz, 1H), 7.49 - 7.39 (m, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.81 (d, J = 7.6 Hz, 1H), 6.65 - 6.49 (m, 1H), 6.46 (br d, J = 15.0 Hz, 1H), 4.97 (br d, J = 7.1 Hz, 1H), 3.38 - 3.22 (m, 2H), 3.04 - 2.89 (m, 2H), 2.83 (s, 2H), 2.77 - 2.67 (m, 5H), 2.49 - 2.48 (m, 3H), 1.28 - 1.16 (m, 6H);1H NMR (400 MHz, CDCl3) δ = 10.69 (s, 1H), 7.87 (br d, J = 1.4 Hz, 1H), 7.63 (br d, J = 7.4 Hz, 1H), 7.53 (br s, 1H), 7.25 - 7.20 (m, 1H), 6.91 - 6.79 (m, 2H), 6.45 - 6.24 (m, 2H), 5.47 (br s, 1H), 5.17 (q, J = 7.0 Hz, 1H), 3.64 - 3.41 (m, 2H), 3.08 (br s, 2H), 2.86 (s, 3H), 2.81 - 2.72 (m, 4H), 2.54 (s, 3H), 1.32 - 1.26 (m, 6H). LC-MS (ES+, m/z): 502.3 [(M+H)+]; Rt=2.110 min; HRMS (EI): m/z [M]+ found:502.3394;SFC:96.74%. Example 70 (Compound 204) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-(isopropyl(methyl)amino)pyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
[00804] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (118.46 mg, 917.19 µmol, 1.5 eq) in DMF (2.5 mL) was added DIEA (790.27 mg, 6.11 mmol, 1.07 mL, 10 eq) and (S)-6-ethyl-5- (isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino) propanamido)ethyl)phenyl) amino)pyrazine-2- carboxamide (270 mg, 611.46 µmol, 1 eq) , then BOP (405.65 mg, 917.19 µmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction was concentrated. The crude was purified by prep-HPLC (column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%-45%,8min) to give (S,E)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5- (isopropyl(methyl)amino) pyrazine-2-carboxamide (64.81 mg, 116.25 µmol, 19.01% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.15 - 11.06 (m, 1H), 9.67 (br s, 1H), 8.11 - 7.88 (m, 1H), 7.76 (br d, J = 2.1 Hz, 1H), 7.55 - 7.50 (m, 1H), 7.49 - 7.42 (m, 2H), 7.24 - 7.16 (m, 1H), 6.86 - 6.75 (m, 2H), 6.65 - 6.46 (m, 1H), 4.99 - 4.54 (m, 1H), 4.25 (td, J = 6.6, 13.2 Hz, 1H), 3.90 - 3.81 (m, 2H), 3.33 - 3.23 (m, 2H), 2.91 - 2.84 (m, 5H), 2.80 - 2.67 (m, 11H), 1.30 - 1.19 (m, 12H). LC-MS (ES+, m/z): 553.4 [(M+H)+]; Rt=2.247 min; HRMS (EI): m/z [M]+ found:553.3696;SFC:99.14%. Example 71 (Compound 228) (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide
[00805] A mixture of (E)-4-(dimethylamino)but-2-enoic acid (573.80 mg, 3.46 mmol, 1.5 eq, HCl) in DMF (8 mL), DIPEA (2.99 g, 23.10 mmol, 10 eq), (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino) pyrazine-2-carboxamide (1 g, 2.31 mmol, 1 eq, HCl) was added at 0 °C , and then BOP (1.53 g, 3.46 mmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 h. LCMS indicated the reaction was complete. The mixture was concentrated to dryness. The mixture was purified by prep-HPLC (column: Phenomenex luna C18250*50mm*10 µm; mobile phase: [water(TFA)-ACN];B%: 20%-50%,10min) to give (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)- N-methylbut-2-enamido) propanamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide (320 mg, 622.44 µmol, 26.95% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 9.70 (br s, 1H), 8.20 (br s, 1H), 8.11 - 7.88 (m, 1H), 7.80 (br s, 1H), 7.54 - 7.36 (m, 2H), 7.22 (br t, J = 7.8 Hz, 1H), 6.81 (q, J = 8.0 Hz, 2H), 6.66 - 6.45 (m, 1H), 5.05 - 4.51 (m, 1H), 3.98 - 3.80 (m, 2H), 3.45 - 3.28 (m, 2H), 2.90 (s, 2H), 2.81 - 2.66 (m, 9H), 2.56 (s, 3H), 2.30 - 2.20 (m, 1H), 1.33 - 1.18 (m, 3H), 1.14 - 1.01 (m, 4H)(TFA, salt); LCMS (ES+, m/z): 508.2 [(M+H)+]; Rt= 2.117 min; HRMS (EI): m/z [M]+ found:508.3014
Example 72 (Compound 232) (S, E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-methylpyrazine-2-carboxamide
Step 1: (S, E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-methylpyrazine-2-carboxamide
[00806] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (1.49 g, 11.51 mmol, 1.2 eq) in DMF (40 mL) was added DIEA (12.39 g, 95.90 mmol, 16.70 mL, 10 eq), (S)-5-(isopropyl (methyl) amino)-6- methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (4.1 g, 9.59 mmol, 1 eq), and then added BOP (5.09 g, 11.51 mmol, 1.2 eq). The mixture was stirred at 0 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (120 mL), and then extracted with EtOAc (90 mL * 3). The combined organic layers were washed with saturated brine (100 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, DCM/MeOH=30/1 to 5/1) to give (S, E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)-5- (isopropyl (methyl) amino)-6-methylpyrazine-2-carboxamide as yellow solid (96.13 mg, 198.40 µmol, 32.58% yield). 1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 8.07 (br s, 1H), 7.81 - 7.77 (m, 1H),
7.55 - 7.51 (m, 1H), 7.46 - 7.41 (m, 2H), 7.22 - 7.16 (m, 1H), 6.80 - 6.75 (m, 1H), 6.62 - 6.49 (m, 2H), 5.02 - 4.94 (m, 1H), 4.34 (quin, J = 6.6 Hz, 1H), 3.32 - 3.24 (m, 2H), 3.16 - 3.08 (m, 2H), 2.91 - 2.88 (m, 3H), 2.86 - 2.83 (m, 2H), 2.67 (br s, 3H), 2.44 (s, 3H), 2.24 - 2.20 (m, 6H), 1.24 - 1.16 (m, 9H). LC-MS (ES+, m/z): 539.4 [(M+H) +]; Rt =2.178 min; HRMS (EI): m/z [M]+ found:539.3435. Example 73 (Compound 202) (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide-
Step 1: tert-butyl (E)-N-(4-bromobut-2-enoyl)-N-methyl-L-alaninate
[00807] To a mixture of tert-butyl methyl-L-alaninate hydrochloride (9 g, 45.99 mmol, N/A purity, 1 eq) and (E)-4-bromobut-2-enoic acid (8.35 g, 50.59 mmol, 1.1 eq) in DMF (90 mL) was added BEP (18.89 g, 68.99 mmol, 1.5 eq) and DIEA (59.44 g, 459.92 mmol, 80.11 mL, 10 eq) in one portion at 20 °C under N2. The mixture was stirred at 20 °C for 1 hr. LCMS indicated the reaction was complete. The residue was poured into ice-water (w/w = 1/1) (120 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2,Petroleum ether : Ethyl acetate=30/1 to 1 /1) to afford tert-butyl (E)-N-(4-bromobut-2-enoyl)-N- methyl-L-alaninate (8 g, 26.13 mmol, 28.40% yield) as a yellow oil. LC-MS (ES+, m/z): 206.3 [(M+H- 100)+]. Rt=1.837 min. Step 2: tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alaninate
[00808] To a mixture of tert-butyl (E)-N-(4-bromobut-2-enoyl)-N-methyl-L-alaninate (8 g, 26.13 mmol, 1 eq) and azetidine hydrochloride (2.44 g, 26.13 mmol, 1 eq) in DMF (80 mL) was added DIPEA (10.13 g, 78.38 mmol, 13.65 mL, 3 eq) in one portion at 25 °C. The mixture was stirred at 25 °C for 10 hrs. LCMS indicated the reaction was complete. The reaction mixture was filtrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether : Ethyl acetate=1/1 to 1/1). To afford the title compound tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N- methyl-L-alaninate (550 mg, 1.95 mmol, 2.48% yield) as a yellow oil.LC-MS (ES+, m/z): 283.4 [(M+H)+]. Rt=0.546 min
Step 3: (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alanine
[00809] To a mixture of tert-butyl (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alaninate (500 mg, 1.77 mmol, 1 eq) in DCM (1.5 mL) was added TFA (77.00 g, 675.30 mmol, 381.38 eq) in one portion at 20 °C. The mixture was stirred at 20 °C for 1 hr. LCMS indicated the reaction was complete. The reaction concentrated under reduced pressure to give a residue. To afford the title compound (E)-N-(4-(azetidin-1- yl)but-2-enoyl)-N-methyl-L-alanine (480 mg, crude) as a yellow oil. LC-MS (ES+, m/z): 227.3 [(M+H)+]. Rt=0.177 min. Step 4: (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00810] To a mixture of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (250 mg, 835.09 µmol, 1 eq) and (E)-N-(4-(azetidin-1-yl)but-2-enoyl)-N-methyl-L-alanine (188.96 mg, 835.09 µmol, 1 eq) in DMF (2.5 mL), was added BOP (554.01 mg, 1.25 mmol, 1.5 eq) and DIPEA (1.08 g, 8.35 mmol, 1.45 mL, 10 eq) in one portion at 0 °C. The mixture was stirred at 0 °C for 4 hr. LCMS indicated the reaction was complete. The reaction mixture was filtrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (TFA condition).column: C18-1150*30 mm*5 µm; mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min.To afford the title compound (S,E)-3-( (3-(2-(2-(4- (azetidin-1-yl) -N-methylbut- 2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2- carboxamide (60.43 mg, 117.29 µmol, 14.05% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.12 - 10.98 (m, 1H), 10.10 - 9.95 (m, 1H), 8.16 (br s, 1H), 8.07 - 7.74 (m, 2H), 7.66 (br d, J = 8.0 Hz, 1H), 7.43 (s, 1H), 7.28 - 7.19 (m, 1H), 6.89 - 6.62 (m, 2H), 6.55 - 6.31 (m, 1H), 5.00 - 4.52 (m, 1H), 4.22 - 4.07 (m, 2H), 4.06 - 3.89 (m, 4H), 3.36 - 3.25 (m, 2H), 2.94 - 2.86 (m, 2H), 2.80 - 2.71 (m, 3H), 2.71 - 2.65 (m, 2H), 2.52 - 2.50 (m, 3H), 2.43 - 2.19 (m, 2H), 1.30 - 1.20 (m, 6H)(TFA, salt). 1H NMR (400 MHz, D2O) δ = 7.27 - 7.22 (m, 1H), 7.19 - 7.12 (m, 1H), 7.08 - 7.01 (m, 1H), 6.77 - 6.70 (m, 1H), 6.53 (br d, J = 15.5 Hz, 1H), 6.47 - 6.29 (m, 1H), 4.85 - 4.80 (m, 1H), 4.53 (d, J = 6.9 Hz, 1H), 4.28 - 4.17 (m,
2H), 4.05 - 3.93 (m, 2H), 3.91 - 3.80 (m, 2H), 3.44 - 3.29 (m, 2H), 2.83 (s, 2H), 2.70 - 2.65 (m, 2H), 2.57 - 2.43 (m, 3H), 2.19 - 2.18 (m, 1H), 2.19 - 2.13 (m, 3H), 1.33 - 1.25 (m, 1H), 1.24 - 1.19 (m, 2H), 1.08 - 1.03 (m, 3H). LC-MS (ES+, m/z): 508.3[(M+H)+]; Rt=2.076 min. HRMS (EI): m/z [M]+ found: 508.3055. Example 74 (Compound 205) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-(isopropylamino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino)phenethyl)carbamate
[00811] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (200 mg, 476.30 µmol, 1 eq) in DMA (2 mL) was added propan-2-amine (140.77 mg, 2.38 mmol, 5 eq) and DIPEA (615.58 mg, 4.76 mmol, 829.63 µL, 10 eq).The mixture was stirred at 100 °C for 10 hr . LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1) to give tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino) phenethyl) carbamate (180 mg, 389.97 µmol, 81.88% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.22 (s, 1H), 7.73 - 7.68 (m, 1H), 7.57 - 7.53 (m, 1H), 7.33 - 7.24 (m, 2H), 7.21 - 7.15 (m, 1H), 6.92 (t, J = 5.3 Hz, 1H), 6.78 - 6.74 (m, 2H), 4.31 - 3.98 (m, 1H), 3.15 - 3.10 (m, 2H), 2.67 - 2.63 (m, 2H), 2.61 - 2.55 (m, 2H), 1.37 (s, 9H), 1.27 (d, J = 6.6 Hz, 6H), 1.21 - 1.17 (m, 3H). LC-MS (ES+, m/z): 443.3 [(M+H) +]; Rt =0.887 min.
Step 2: 3-((3-(2-aminoethyl) phenyl)amino)-6-ethyl-5-(isopropylamino)pyrazine-2-carboxamide
[00812] To tert-butyl (3-((3-carbamoyl-5-ethyl-6-(isopropylamino)pyrazin-2- yl)amino)phenethyl)carbamate (180 mg, 406.73 µmol, 1 eq) was added HCl/MeOH (4 M, 101.68 µL).The mixture was stirred at 16 °C for 2 hr . LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. to give a residue. The crude product was triturated with EtOAc at 25 oC for 10 min to give 3-((3-(2-aminoethyl) phenyl)amino)-6-ethyl-5- (isopropylamino)pyrazine-2-carboxamide (130 mg, 367.71 µmol, 90.41% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.25 (br s, 1H), 8.08 (br s, 3H), 7.57 (s, 1H), 7.53 (br d, J = 8.1 Hz, 1H), 7.24 (t, J = 7.8 Hz, 2H), 6.86 - 6.82 (m, 1H), 6.82 - 6.74 (m, 1H), 4.29 - 4.18 (m, 1H), 3.05 - 2.96 (m, 2H), 2.90 - 2.83 (m, 2H), 2.61 - 2.55 (m, 2H), 1.28 (d, J = 6.5 Hz, 6H), 1.19 (t, J = 7.4 Hz, 3H) ; LC-MS (ES+, m/z): 343.2[(M+H)+]; Rt=0.684 min Step 3: tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl)(methyl)carbamate
[00813] To a solution of 3-((3-(2-aminoethyl) phenyl)amino)-6-ethyl-5-(isopropylamino)pyrazine-2- carboxamide (130 mg, 379.63 µmol, 1 eq), 1-methylimidazole (311.68 mg, 3.80 mmol, 302.60 µL, 10 eq) and N-(tert-butoxycarbonyl)-N-methyl-L-alanine (115.73 mg, 569.45 µmol, 1.5 eq), 1-methylimidazole (311.68 mg, 3.80 mmol, 302.60 µL, 10 eq) in DMF (1.5 mL) was added TCFH (159.78 mg, 569.45 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 4 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to give tert-butyl (S)-(1-((3-((3- carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2- yl)(methyl)carbamate (130 mg, 204.32 µmol, 53.82% yield) as yellow solid.1H NMR (400 MHz, DMSO- d6) δ = 11.21 (s, 1H), 7.84 - 7.77 (m, 1H), 7.67 (s, 1H), 7.57 - 7.51 (m, 1H), 7.35 (br d, J = 8.1 Hz, 1H), 7.24 (br d, J = 2.4 Hz, 1H), 7.18 (t, J = 7.8 Hz, 1H), 6.76 (t, J = 8.3 Hz, 2H), 4.29 - 4.23 (m, 1H), 3.32 - 3.26 (m, 3H), 2.69 (s, 5H), 2.58 (q, J = 7.4 Hz, 2H), 1.37 (br s, 9H), 1.28 - 1.17 (m, 12H), LC-MS (ES+, m/z): 528.4 [(M+H)+]; Rt=0.929 min.
Step 4: (S)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00814] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl)(methyl)carbamate (130 mg, 246.37 µmol, 1 eq) HCl/MeOH (4 M, 61.59 µL, 1 eq) was stirred at 16 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. The crude product was triturated with EtOAc at 25 oC for 10 min to give (S)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2- (methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide as yellow solid (100 mg, 215.39 µmol, 87.43% yield).1H NMR (400 MHz, DMSO-d6) δ = 11.21 (br s, 1H), 9.24 - 9.15 (m, 1H), 8.85 - 8.76 (m, 1H), 8.64 (br t, J = 5.4 Hz, 1H), 7.58 (s, 1H), 7.45 (br d, J = 8.0 Hz, 1H), 7.20 (t, J = 7.8 Hz, 1H), 6.80 (br d, J = 7.4 Hz, 2H), 4.27 (br s, 1H), 3.74 - 3.64 (m, 1H), 3.43 - 3.37 (m, 1H), 2.85 - 2.67 (m, 4H), 2.59 (q, J = 7.4 Hz, 3H), 2.42 - 2.40 (m, 2H), 1.32 - 1.17 (m, 12H); LC-MS (ES+, m/z): 428.3[(M+H)+]; Rt=0.731 min.; LC-MS (ES+, m/z): 428.3[(M+H)+]; Rt=0.731 min. Note:HCl/EtOAc (4 M):HCl was bubbled into a solution EtOAc at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/EtOAc (4 M) Step 5: (S, E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)-6-ethyl-5-(isopropylamino) pyrazine-2-carboxamide
[00815] To a solution of (S)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (100 mg, 233.90 µmol, 1 eq) in DMF (3 mL) was added BOP (124.14 mg, 280.67 µmol, 1.2 eq) and DIPEA (302.29 mg, 2.34 mmol, 407.40 µL, 10 eq), (E)-4- (dimethylamino)but-2-enoic acid (36.25 mg, 280.67 µmol, 1.2 eq) .The mixture was stirred at 0 °C for 4 hrs. LC-MS indicated the mixture was complete. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%-45%,8min) to give desired compound to give (S, E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)-
6-ethyl-5-(isopropylamino) pyrazine-2-carboxamide (13.13 mg, 23.96 µmol, 10.24% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.25 - 11.18 (m, 1H), 9.90 (br s, 1H), 7.92 (br t, J = 5.5 Hz, 1H), 7.64 - 7.52 (m, 2H), 7.44 - 7.37 (m, 1H), 7.25 (br s, 1H), 7.21 - 7.15 (m, 1H), 6.85 - 6.73 (m, 3H), 6.66 - 6.47 (m, 1H), 4.57 (q, J = 6.7 Hz, 1H), 4.26 (qd, J = 6.7, 13.6 Hz, 1H), 3.93 - 3.81 (m, 2H), 3.34 - 3.23 (m, 2H), 2.90 (s, 2H), 2.80 - 2.74 (m, 6H), 2.73 - 2.66 (m, 3H), 2.62 - 2.56 (m, 2H), 1.29 - 1.16 (m, 12H)(TFA, salt) ; LC-MS (ES+, m/z): 539.3[(M+H)+]; Rt=2.117 min;98.31% purity; HRMS:539.3476. Example 75 (Compound 219) (E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) carbamate
[00816] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2-yl) amino) phenethyl) carbamate (1 g, 2.38 mmol, 1 eq) in DMA (10 mL) was added K2CO3 (1.15 g, 8.34 mmol, 3.5 eq) and Pd(dppf)Cl2 (1.74 g, 2.38 mmol, 1 eq), cyclopropylboronic acid (245.48 mg, 2.86 mmol, 1.2 eq). The mixture was stirred at 100 °C for 2 hours under N2. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, The reaction mixture was poured into saturated EDTA (50 mL) and stirred 60 min, then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to give tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5- ethylpyrazin-2-yl) amino) phenethyl ) carbamate as yellow solid (1 g, 2.04 mmol, 85.85% yield, 87% purity). 1H NMR (400 MHz, DMSO-d6) δ = 11.06 - 11.00 (m, 1H), 8.13 - 8.09 (m, 1H), 7.81 (br d, J = 1.5 Hz, 1H), 7.41 (s, 1H), 7.26 (s, 1H), 7.21 (t, J = 7.8 Hz, 1H), 6.81 (br d, J = 7.5 Hz, 1H), 4.07 - 3.97 (m, 1H), 3.19 - 3.12 (m, 2H), 2.92 - 2.85 (m, 2H), 2.67 (br t, J = 7.3 Hz, 2H), 2.31 - 2.23 (m, 1H), 1.35 - 1.15 (m, 12H), 1.13 - 1.06 (m, 4H). LC-MS (ES+, m/z): 426.2 [(M+H) +]; Rt =0.928 min.
Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6-ethylpyrazine-2-carboxamide hydrochloride
[00817] [0025] To tert-butyl (3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) carbamate (1 g, 2.35 mmol, 1 eq) was added HCl/MeOH (4 M, 25.00 mL, 42.55 eq). The mixture was stirred at 16 °C for 2 hours. LCMS showed the reaction was completed, the reaction mixture was concentrated under reduced pressure to give 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6- ethylpyrazine-2-carboxamide hydrochloride as yellow solid (0.9 g, crude, HCl). 1H NMR (400 MHz, DMSO-d6) δ = 11.07 (s, 1H), 8.13 (br s, 4H), 7.88 - 7.78 (m, 1H), 7.59 - 7.48 (m, 1H), 7.46 - 7.40 (m, 1H), 7.33 - 7.22 (m, 1H), 6.95 - 6.81 (m, 1H), 3.10 - 2.99 (m, 2H), 2.96 - 2.83 (m, 4H), 2.37 - 2.21 (m, 1H), 1.27 (t, J = 7.5 Hz, 3H), 1.14 - 1.03 (m, 4H)(HCl salt); LC-MS (ES+, m/z): 362.2 [(M+H)+]. Rt=0.711 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethylpyrazine-2-carboxamide
[00818] To a solution of 3-((3-(2-aminoethyl) phenyl) amino)-5-cyclopropyl-6-ethylpyrazine-2- carboxamide (80 mg, 245.85 µmol, 1 eq) in DMF (0.5 mL) was added DIEA (317.73 mg, 2.46 mmol, 428.21 µL, 10 eq) (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (172.29 mg, 344.18 µmol, 40% purity, 1.4 eq) and then BOP (152.23 mg, 344.18 µmol, 1.4 eq). The mixture was stirred at 0 °C for 4 hours. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL), and then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (20 mL*2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%-35%,8min) to give desired compound (E)- 5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl)
amino)-6-ethylpyrazine-2-carboxamide (10.37 mg, 20.43 µmol, 8.31% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (d, J = 2.3 Hz, 1H), 9.69 (br d, J = 1.5 Hz, 1H), 8.23 - 7.99 (m, 2H), 7.84 - 7.78 (m, 1H), 7.50 - 7.38 (m, 2H), 7.27 - 7.20 (m, 1H), 6.91 - 6.67 (m, 2H), 6.63 - 6.49 (m, 1H), 4.04 - 3.94 (m, 2H), 3.92 - 3.79 (m, 2H), 3.31 - 3.27 (m, 2H), 3.06 - 3.02 (m, 2H), 2.94 - 2.87 (m, 2H), 2.80 - 2.66 (m, 9H), 2.32 - 2.24 (m, 1H), 1.27 (t, J = 7.5 Hz, 3H), 1.13 - 1.04 (m, 4H), LC- MS (ES+, m/z): 508.3 [(M+H)+]. Rt =2.182 min. HRMS (EI): m/z [M]+ found:508.3000. Example 76 (Compound 221) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) ethyl)phenyl)amino)-6- ethyl-5-(ethyl(methyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino)pyrazin-2-yl) amino)phenethyl)carbamate
[00819] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate in DMA (10 mL) was added DIPEA (1.54 g, 11.91 mmol, 2.07 mL, 10 eq) and N-methylethanamine (703.85 mg, 11.91 mmol, 1.02 mL, 10 eq) at 20 °C. The mixture was stirred at 100 °C for 10 hr at sealed tube. LCMS showed the reaction was completed. The reaction was poured into water (15 mL) and extracted with EtOAc(20 mL*3). The organic layers were combined, washed with water (10 mL*3), saturated brine (10 mL*3), dried (Na2SO4), filtered and concentrated to give crude product. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert-butyl (3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)carbamate (430 mg, 971.63 µmol, 81.60% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.12 - 11.06 (m, 1H), 7.81 - 7.65 (m, 1H), 7.61 - 7.52 (m, 1H), 7.49 - 7.36 (m, 2H), 7.23 - 7.16 (m, 1H), 6.92 - 6.83 (m, 1H), 6.78 (d, J = 7.4 Hz, 1H), 3.52 - 3.40 (m, 2H), 3.17 - 3.14 (m, 2H), 3.04 (s, 3H), 2.76 - 2.64 (m, 4H), 1.38 - 1.33 (m, 9H), 1.24 - 1.18 (m, 6H). LC-MS (ES+, m/z): 443.3[(M+H)+]; Rt=0.908 min.
Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino) pyrazine-2-carboxamide
[00820] A mixture of tert-butyl (3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino) pyrazin-2- yl)amino)phenethyl)carbamate (400 mg, 903.85 µmol, 1 eq) in HCl/MeOH (40 mL) was stirred at 16 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5- (ethyl(methyl)amino)pyrazine-2-carboxamide (410 mg, crude) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.14 (s, 1H), 7.75 (br s, 4H), 7.61 - 7.55 (m, 1H), 7.52 (s, 1H), 7.50 - 7.41 (m, 1H), 7.26 (t, J = 7.8 Hz, 1H), 6.89 - 6.83 (m, 1H), 4.11 (br s, 2H), 3.46 (q, J = 7.0 Hz, 2H), 3.04 (s, 3H), 2.88 - 2.81 (m, 2H), 2.74 (q, J = 7.4 Hz, 2H), 1.25 - 1.18 (m, 6H). LC-MS (ES+, m/z): 343.1[(M+H)+]; Rt=0.703 min. HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3 tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00821] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-(ethyl (methyl)amino)pyrazine-2- carboxamide (390 mg, 1.14 mmol, 1 eq) and N-(tert-butoxycarbonyl)-N-methyl-L-alanine (347.19 mg, 1.71 mmol, 1.5 eq) in DMF (4 mL) was added 1-methylimidazole (935.07 mg, 11.39 mmol, 907.84 µL, 10 eq), and then TCFH (479.32 mg, 1.71 mmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 3 hrs. LCMS showed the reaction was completed. The reaction was poured into water (10 mL) and extracted with EtOAc (15 mL*3). The organic layers were combined, washed with water (10 mL*3), saturated brine (10 mL*3), dried (Na2SO4), filtered and concentrated to give crude product. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert- butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(ethyl (methyl)amino)pyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl) carbamate (506 mg, 958.96 µmol, 84.20% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 10.95 - 10.87 (m, 1H), 7.68 - 7.50 (m, 2H), 7.42 - 7.34 (m, 1H), 7.31 - 7.19 (m, 2H), 7.05 - 6.97 (m, 1H), 6.60 (d, J = 7.5 Hz, 1H), 4.43 - 3.99 (m, 1H), 3.27 (q, J = 7.0 Hz, 2H), 3.12 - 3.05 (m,
2H), 2.88 - 2.82 (m, 3H), 2.57 - 2.53 (m, 2H), 2.32 - 2.31 (m, 5H), 1.21 - 1.13 (m, 9H), 1.06 - 0.98 (m, 9H). LC-MS (ES+, m/z): 528.2[(M+H)+]; Rt=0.890 min. Step 4:(S)-6-ethyl-5-(ethyl(methyl)amino)-3-((3-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00822] A mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-(ethyl(methyl) amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (300 mg, 568.55 µmol, 1 eq) in HCl/MeOH (30 mL) was stirred at 16 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to afford (S)-6-ethyl-5- (ethyl(methyl)amino)-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2- carboxamide (298 mg, crude) as yellow oil. LC-MS (ES+, m/z): 428.2[(M+H)+]; Rt=0.721 min. Note:HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 5:(S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2-carboxamide
[00823] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (131.41 mg, 1.02 mmol, 1.5 eq) in DMF (2.5 mL) was added DIPEA (876.63 mg, 6.78 mmol, 1.18 mL, 10 eq), (S)-6-ethyl-5- (ethyl(methyl)amino)-3-((3-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)pyrazine-2- carboxamide (290 mg, 678.30 µmol, 1 eq) and then BOP (450.00 mg, 1.02 mmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hours. LCMS indicated the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex Luna C18 75*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 20%-50%,7min. to afford (S,E)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl) phenyl)amino)-6-ethyl-5- (ethyl(methyl)amino)pyrazine-2-carboxamide (89.46 mg, 165.14 µmol, 24.35% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.16 - 11.05 (m, 1H), 10.10 - 9.61 (m, 1H), 8.15 - 7.85 (m, 1H), 7.74 (br d, J = 1.9 Hz, 1H), 7.59 - 7.50 (m, 1H), 7.50 - 7.40 (m, 2H), 7.26 - 7.16 (m, 1H), 6.87 - 6.75 (m, 2H), 6.65 - 6.46 (m, 1H), 5.00 - 4.54 (m, 1H), 3.91 - 3.82 (m, 2H), 3.50 - 3.41 (m, 2H), 3.35 - 3.24 (m, 2H),
3.04 (s, 3H), 2.89 (s, 2H), 2.80 - 2.66 (m, 11H), 1.30 - 1.17 (m, 9H)(TFA salt). LC-MS (ES+, m/z): 539.3[(M+H)+]; Rt=2.205 min; HRMS (EI): m/z [M]+ found: 539.3488 Example 77 (Compound 226) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl) phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide
Step 1: tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycinate
[00824] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (1.52 g, 9.17 mmol, 2 eq, HCl) in DMF (5 mL) was added DIPEA (5.93 g, 45.85 mmol, 7.99 mL, 10 eq), tert-butyl methylglycinate (1.00 g, 4.58 mmol, 1 eq, HCl), HOBt (619.49 mg, 4.58 mmol, 1 eq) and EDCI (1.32 g, 6.88 mmol, 1.5 eq). The mixture was stirred at 25 °C for 10 hours. LCMS showed the reaction was completed. The reaction mixture was filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC column: C18 (250*50mm*10 um); mobile phase: [water( NH4HCO3)-ACN];B%: 15%- 40%,10min. to afford tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycinate (540 mg, 2.11 mmol, 45.95% yield) as a brown oil. 1H NMR (400 MHz, DMSO-d6) δ = 6.68 - 6.34 (m, 2H), 4.23 - 3.95 (m, 2H), 3.11 - 2.84 (m, 5H), 2.18 - 2.07 (m, 6H), 1.45 - 1.37 (m, 9H) LC-MS (ES+, m/z): 257.1[(M+H)+]; Rt=1.329 min. Step 2: (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine
[00825] To a solution of tert-butyl (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycinate (270 mg, 1.05 mmol, 1 eq) in DCM (2 mL) was added TFA (3.08 g, 27.01 mmol, 2 mL, 25.65 eq). The mixture was
stirred at 16 °C for 2 hours. LCMS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to afford (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (466 mg, crude) as a yellow oil. 1H NMR (400 MHz, DMSO-d6) δ = 9.97 (br d, J = 17.4 Hz, 1H), 6.97 - 6.48 (m, 2H), 4.28 - 4.02 (m, 2H), 3.95 - 3.82 (m, 2H), 3.10 (s, 3H), 2.76 (br d, J = 13.4 Hz, 6H). LC-MS (ES+, m/z): 201.1[(M+H)+]; Rt=0.089 min. Step 3: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido) ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00826] To a solution of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (200.66 mg, 400.84 µmol, 40% purity, 1.5 eq) in DMF (1 mL) was added DIPEA (345.37 mg, 2.67 mmol, 465.46 µL, 10 eq), 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (80 mg, 267.23 µmol, 1 eq) and then BOP (177.28 mg, 400.84 µmol, 1.5 eq). The mixture was stirred at 16 °C for 2 hours. LCMS indicated the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 5%-50%, 8min to afford (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)acetamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (84.28 mg, 174.48 µmol, 65.29% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.09 - 11.04 (m, 1H), 9.84 - 9.67 (m, 1H), 8.21 (br s, 2H), 7.89 - 7.83 (m, 1H), 7.72 - 7.63 (m, 1H), 7.47 - 7.41 (m, 1H), 7.27 - 7.21 (m, 1H), 6.91 - 6.68 (m, 2H), 6.63 - 6.48 (m, 1H), 4.03 - 3.95 (m, 2H), 3.91 - 3.81 (m, 2H), 3.36 - 3.29 (m, 2H), 3.04 (s, 2H), 2.80 - 2.70 (m, 11H), 2.50 - 2.47 (m, 3H), 1.26 - 1.21 (m, 3H)(TFA salt). LC-MS (ES+, m/z): 482.3[(M+H)+]; Rt=2.056 min. HRMS (EI): m/z [M+H]+: 482.2882. Example 78 (Compound 227) (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)ethyl) phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide
Step 1 tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl) (methyl)carbamate
[00827] To a solution of (E)-4-((tert-butoxycarbonyl)(methyl)amino)but-2-enoic acid (279.92 mg, 1.30 mmol, 2 eq) in DMF (3 mL) was added DIPEA (840.39 mg, 6.50 mmol, 1.13 mL, 10 eq), (S)-6-ethyl-5- methyl-3-((3-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)pyrazine-2-carboxamide (250 mg, 650.24 µmol, 1 eq) and then BOP (431.38 mg, 975.36 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hours. LCMS indicated the reaction was completed. The reaction was poured into water (5 mL) and extracted with EtOAc (10 mL*3). The organic layers were combined, washed with water (10 mL*3), saturated brine (10 mL*3), dried (Na2SO4), filtered and concentrated to give crude product. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=5/1 to 1/1) to afford tert- butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl) amino)-4-oxobut-2-en-1-yl)(methyl)carbamate (300 mg, 515.73 µmol, 79.31% yield) as yellow solid. LC-MS (ES+, m/z): 582.3[(M+H)+]; Rt=0.782 min. Step 2:(S,E)-6-ethyl-5-methyl-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00828] A mixture of tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl)(methyl)carbamate (280 mg, 481.34 µmol, 1 eq) in HCl/MeOH (30 mL) was stirred at 0 °C for 4 hours. LCMS indicated the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex Luna C1875*30mm*3um; mobile phase: [water(TFA)-ACN];B%: 15%-45%,7min to afford (S,E)-6-ethyl-5-methyl-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (96.08 mg, 196.89 µmol, 40.90% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.08 - 11.04 (m, 1H), 8.73 - 8.52 (m, 2H),
8.19 - 8.12 (m, 1H), 8.10 - 7.90 (m, 1H), 7.89 - 7.83 (m, 1H), 7.69 - 7.64 (m, 1H), 7.46 - 7.41 (m, 1H), 7.28 - 7.19 (m, 1H), 6.85 - 6.79 (m, 1H), 6.79 - 6.69 (m, 1H), 6.63 - 6.45 (m, 1H), 5.01 - 4.53 (m, 1H), 3.77 - 3.67 (m, 2H), 3.32 - 3.26 (m, 2H), 2.93 - 2.87 (m, 2H), 2.77 - 2.67 (m, 5H), 2.59 - 2.54 (m, 3H), 2.49 - 2.47 (m, 3H), 1.30 - 1.18 (m, 6H). LC-MS (ES+, m/z): 482.3[(M+H)+]; Rt=2.084 min; HRMS (EI): m/z [M]+ found: 482.2899. Note:HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Example 79 (Compound 236) (R)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (R)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00829] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6-ethylpyrazine-2- carboxamide hydrochloride (360 mg, 1.11 mmol, 1 eq) N-(tert-butoxycarbonyl)-N-methyl-D-alanine (247.32 mg, 1.22 mmol, 1.1 eq) NMI (908.32 mg, 11.06 mmol, 881.86 µL, 10 eq) in DMF (4 mL) at 0 °C, TCFH (465.61 mg, 1.66 mmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The mixture was poured into water (15 mL) and extracted with EtOAc (10 mL*2). The organic layers was washed with water (10 mL*2), saturated brine(10 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel Ethyl acetate: Petroleum ether =1:1 ) TLC (plate 1) to give tert- butyl (R)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan- 2-yl)(methyl)carbamate (520 mg, 1.02 mmol, 92.05% yield) as yellow oil. LC-MS (ES+, m/z): 511.4[(M+H)+]. Rt=0.918 min.
Step 2: (R)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00830] The mixture tert-butyl (R)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 979.19 µmol, 1 eq) and HCl/MeOH (4 M, 30 mL, 122.55 eq) was stirred at 16 °C for 1 hour. LCMS showed the reaction was completed. The mixture was concentrated under reduced pressure to give (R)-5-cyclopropyl-6-ethyl-3-((3- (2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (440 mg, crude) as red solid. LC-MS (ES+, m/z): 411.2[(M+H)+]. Rt=0.699. Note: HCl/MeOH (4 M): HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (R)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00831] To a solution of (R)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (440 mg, 1.07 mmol, 1 eq) DIPEA (692.64 mg, 5.36 mmol, 933.47 µL, 5 eq) in DMF (4 mL) at 0°C, acryloyl chloride (116.41 mg, 1.29 mmol, 104.88 µL, 1.2 eq) was added. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 25%- 55%,8min) to give (R)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (205.22 mg, 441.75 µmol, 41.21% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.10 - 10.99 (m, 1H), 8.19 - 7.78 (m, 3H), 7.48 - 7.38 (m, 2H), 7.26 - 7.18 (m, 1H), 6.85 - 6.78 (m, 1H), 6.75 - 6.61 (m, 1H), 6.15 - 5.99 (m, 1H), 5.72 - 5.56 (m, 1H), 4.57 (br d, J = 7.0 Hz, 1H), 3.39 - 3.23 (m, 2H), 2.96 - 2.82 (m, 4H), 2.76 - 2.66 (m, 3H), 2.34 - 2.25 (m, 1H), 1.31 - 1.17 (m, 6H), 1.14 - 1.04 (m, 4H); LC-MS (ES+, m/z): 465.3[(M+H)+]; Rt=2.640 min; HRMS (EI): m/z [M]+ found: 465.2622.
Example 80 (Compound 207) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)- 5,6-dimethylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide
[00832] To a solution of (S)-5,6-dimethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (300 mg, 809.83 µmol, 1 eq) (E)-4-(dimethylamino)but-2-enoic acid (201.18 mg, 1.21 mmol, 1.5 eq) BOP (537.26 mg, 1.21 mmol, 1.5 eq in DMF (3 mL) at 0 °C, DIPEA (1.05 g, 8.10 mmol, 1.41 mL, 10 eq) was added. The mixture was stirred at 15 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min) to give (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (121.2 mg, 250.46 µmol, 30.93% yield, 99.52% purity) as brown solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 - 11.05 (m, 1H), 9.88 - 9.70 (m, 1H), 8.27 - 8.19 (m, 1H), 7.93 (br t, J = 5.5 Hz, 1H), 7.84 (br s, 1H), 7.67 (br d, J = 7.9 Hz, 1H), 7.43 (s, 1H), 7.27 - 7.20 (m, 1H), 6.87 - 6.76 (m, 2H), 6.67 - 6.43 (m, 1H), 4.57 (q, J = 6.7 Hz, 1H), 3.93 - 3.81 (m, 2H), 3.37 - 3.27 (m, 2H), 2.91 (s, 2H), 2.81 - 2.75 (m, 6H), 2.74 - 2.66 (m, 3H), 2.48 (s, 3H), 2.43 (s, 3H), 1.31 - 1.22 (m, 3H)(TFA, salt); LC-MS (ES+, m/z): 482.3 [(M+H)+]. Rt=1.950 min; HRMS (EI): m/z [M]+ found: 482.2889.
Example 81 (Compound 214) (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5,6- dimethylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-bromo-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5,6- dimethylpyrazine-2-carboxamide
[00833] To a solution of (E)-4-bromobut-2-enoic acid (97.98 mg, 593.88 µmol, 1.1 eq) DIPEA (697.77 mg, 5.40 mmol, 940.39 µL, 10 eq), BEP (221.78 mg, 809.83 µmol, 1.5 eq) in DMF (2 mL) at 0 °C, (S)- 5,6-dimethyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)-amino)pyrazine-2-carboxamide (200 mg, 539.89 µmol, 1 eq) was added. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was complete. The mixture was poured into water (10 mL) and extracted with EtOAc (5 mL*2). The organic layers was washed with water(5 mL*2), saturated brine(5 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel Ethyl acetate : Petroleum ether =3:1 ) to give (S,E)-3-((3-(2-(2-(4-bromo-N-methylbut-2- enamido)propanamido) ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (130 mg, 251.25 µmol, 46.54% yield) as yellow solid. LC-MS (ES+, m/z): 517.3 [(M+H)+]. Rt=0.784 min. Step 2: (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide
[00834] To a solution of azetidine hydrochloride (31.82 mg, 340.15 µmol, 1.1 eq), NaI (139.05 mg, 927.68 µmol, 3 eq), DIPEA (399.66 mg, 3.09 mmol, 538.62 µL, 10 eq) in DMA (2 mL) at 16 °C, (S,E)-3- ((3-(2-(2-(4-bromo-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2- carboxamide (160 mg, 309.23 µmol, 1 eq) was added, the mixture was stirred at 20°C for 7 h. LCMS
indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%- 40%,8min) to give (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (40 mg, 81.04 µmol, 26.21% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.15 - 11.01 (m, 1H), 9.98 - 9.82 (m, 1H), 8.29 - 8.17 (m, 1H), 8.13 - 7.90 (m, 1H), 7.88 - 7.78 (m, 1H), 7.74 - 7.60 (m, 1H), 7.49 - 7.38 (m, 1H), 7.30 - 7.17 (m, 1H), 6.90 - 6.63 (m, 2H), 6.57 - 6.31 (m, 1H), 5.00 - 4.54 (m, 1H), 4.14 (br s, 6H), 3.32 - 3.23 (m, 2H), 2.91 (s, 2H), 2.76 - 2.69 (m, 3H), 2.49 - 2.26 (m, 8H), 1.31 - 1.20 (m, 3H)(TFA, salt); LC-MS (ES+, m/z): 494.3 [(M+H)+]. Rt=1.970 min; HRMS (EI): m/z [M]+ found: 494.2851. Example 82 (Compound 233) (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (E)-1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1-carboxylic acid
[00835] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (41.46 mg, 250.32 µmol, 1 eq) in DMF (1 mL) was added DIPEA (323.51 mg, 2.50 mmol, 10 eq) and (S)-5-(dimethylamino)-6-methyl-3-((3-(2- (2-(methylamino)propanamido)ethyl)phenyl) amino)pyrazine-2-carboxamide (100 mg, 250.32 µmol, 1 eq) finally added BOP (166.07 mg, 375.48 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 1 h. LCMS showed the reaction was completed. The residue was purified by prep- HPLC (column: Phenomenex C1880*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%- 40%,7min). Compound (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino) -6-methylpyrazine-2-carboxamide (10.43 mg, 20.43 µmol, 8.16% yield) was obtained as a white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.15 - 11.10 (m, 1H), 9.81 - 9.69 (m, 1H), 8.12 - 7.90 (m, 1H), 7.83 - 7.79 (m, 1H), 7.55 - 7.53 (m, 1H), 7.51 - 7.41 (m, 2H),
7.20 (br t, J = 7.7 Hz, 1H), 6.86 - 6.75 (m, 2H), 6.63 - 6.45 (m, 1H), 5.02 - 4.50 (m, 1H), 3.91 - 3.80 (m, 2H), 3.35 - 3.24 (m, 2H), 3.12 - 3.09 (m, 6H), 2.89 (s, 2H), 2.80 - 2.75 (m, 6H), 2.72 - 2.65 (m, 3H), 2.47 (s, 3H), 1.31 - 1.18 (m, 3H)(TFA salt). LC-MS (ES+, m/z): 511.3[(M+H)+]. Rt=2.031 min; HRMS (EI): m/z [M]+ found:511.3134. Example 83 (Compound 230) (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5- (dimethylamino)-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-bromo-N-methylbut-2-enamido)propanamido)ethyl) phenyl)amino)-5- (dimethylamino)-6-methylpyrazine-2-carboxamide
[00836] To a mixture of (E)-4-bromobut-2-enoic acid (45.43 mg, 275.35 µmol, 1.1 eq) in DMF (1 mL) was added DIPEA (323.52 mg, 2.50 mmol, 10 eq) and (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl) amino)pyrazine-2-carboxamide (100 mg, 250.32 µmol, 1 eq), finally added BOP (166.07 mg, 375.48 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The residue was poured into water (20 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether: Ethyl acetate=0:1). Compound (S,E)-3-((3-(2-(2-(4-bromo-N-methylbut-2-enamido)propanamido)ethyl)phenyl) amino)-5- (dimethylamino)-6-methylpyrazine-2-carboxamide (100 mg, 183.00 µmol, 73.11% yield) was obtained as a yellow solid. LC-MS (ES+, m/z): 546.3[(M+H)+]. Rt =0.804 min.
Step 2: (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido) ethyl)phenyl)amino)-5-(dimethylamino)-6-methylpyrazine-2-carboxamide
[00837] To a mixture of azetidine hydrochloride (18.83 mg, 201.30 µmol, 1.1 eq) in DMA (2 mL) was added NaI (82.29 mg, 548.99 µmol, 3 eq) and DIPEA (236.51 mg, 1.83 mmol, 10 eq), finally added (S,E)- 3-((3-(2-(2-(4-bromo-N-methylbut-2-enamido)propanamido)ethyl)phenyl) amino)-5-(dimethylamino)-6- methylpyrazine-2-carboxamide (100 mg, 183.00 µmol, 1 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 12 hrs. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (column: Phenomenex C1880*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 15%-45%,7min). Compound (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(dimethylamino)-6-methylpyrazine-2-carboxamide (10.27 mg, 19.65 µmol, 10.74% yield) was obtained as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.15 - 11.09 (m, 1H), 10.03 - 9.91 (m, 1H), 8.11 - 7.90 (m, 1H), 7.83 - 7.77 (m, 1H), 7.54 (s, 1H), 7.51 - 7.41 (m, 2H), 7.24 - 7.17 (m, 1H), 6.81 - 6.76 (m, 1H), 6.75 - 6.68 (m, 1H), 6.51 - 6.33 (m, 1H), 4.95 - 4.57 (m, 1H), 4.18 - 4.10 (m, 2H), 4.03 - 3.89 (m, 4H), 3.28 (td, J = 6.6, 13.3 Hz, 2H), 3.10 (s, 6H), 2.89 (s, 2H), 2.74 - 2.64 (m, 3H), 2.47 (s, 3H), 2.42 - 2.30 (m, 2H), 1.29 - 1.19 (m, 3H)(TFA salt) LC-MS (ES+, m/z): 523.3[(M+H)+]. Rt=2.046 min; HRMS (EI): m/z [M]+ found:523.3141. Example 84 (Compound 217) (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(N-methylbut-2-ynamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00838] To a mixture of but-2-ynoic acid (46.30 mg, 550.70 µmol, 1.1 eq) in DMF (2 mL) was added DIPEA (647.04 mg, 5.01 mmol, 10 eq) and (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (200 mg, 500.64 µmol, 1 eq), finally added BOP (332.14 mg, 750.96 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The residue was purified by prep- HPLC (column: Phenomenex Luna 80*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 25%- 55%,8min). Compound (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (62.07 mg, 133.33 µmol, 26.63% yield) was obtained as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.16 - 11.08 (m, 1H), 8.07 - 7.89 (m, 1H), 7.80 - 7.75 (m, 1H), 7.60 - 7.55 (m, 1H), 7.50 - 7.44 (m, 1H), 7.43 - 7.38 (m, 1H), 7.24 - 7.17 (m, 1H), 6.79 (br d, J = 7.5 Hz, 1H), 4.89 - 4.82 (m, 1H), 3.34 - 3.25 (m, 2H), 3.11 - 3.10 (m, 6H), 2.99 (s, 2H), 2.69 (s, 3H), 2.48 (s, 3H), 2.00 (d, J = 17.3 Hz, 3H), 1.29 - 1.18 (m, 3H) LC-MS (ES+, m/z): 466.3[(M+H)+]. Rt=2.455 min; HRMS (EI): m/z [M]+ found:466.2534. Example 85 (Compound 210) (E)-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1- carboxamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Scheme 30
Step 1: ethyl 1-((tert-butoxycarbonyl)amino)cyclobutane-1-carboxylate
[00839] To a mixture of ethyl 1-aminocyclobutane-1-carboxylate (5 g, 27.83 mmol, 1 eq) in DMF (50 mL) was added TEA (3.38 g, 33.40 mmol, 1.2 eq) finally added Boc2O (6.68 g, 30.62 mmol, 1.1 eq) in one portion at 25 °C. The mixture was stirred at 25 °C for 12 hours. LCMS showed the reaction was completed. The residue was poured into water (30 mL). The aqueous phase was extracted with ethyl acetate (30 mL*3). The combined organic phase was washed with saturated brine (30 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether: Ethyl acetate=10:1). Compound ethyl 1-((tert- butoxycarbonyl)amino)cyclobutane-1-carboxylate (5 g, 15.62 mmol, 56.12% yield) was obtained as a yellow Oil. LC-MS (ES+, m/z): 244.2[(M+H)+]. Rt =0.777 min. Step 2: ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclobutane-1-carboxylate
[00840] To a solution of Ethyl 1-((tert-butoxycarbonyl)amino)cyclobutane-1-carboxylate (5 g, 15.62 mmol, 1 eq) in DMF (50 mL) 0°C, NaH (937.03 mg, 23.43 mmol, 1.5 eq, 60% purity)was added. The mixture was stirred at 0 °C for 30 min, MeI (3.33 g, 23.43 mmol, 1.5 eq) was added, and then allowed to 16 °C for 1.5 hr. LCMS showed the reaction was completed. The residue was poured into saturated NH4Cl (30 mL). The aqueous phase was extracted with ethyl acetate (30 mL*3). The combined organic phase was washed with saturated brine (30mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Dichloromethane: Methanol=20:1). Compound ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclobutane-1-carboxylate (4 g, 11.97 mmol, 76.63% yield) was obtained as a white oil. LC-MS (ES+, m/z): 258.3[(M+H)+]. Rt=0.848 min.
Step 3: ethyl 1-(methylamino)cyclobutane-1-carboxylate
[00841] To a mixture of ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclobutane-1-carboxylate (2 g, 7.77 mmol, 1 eq) in DCM (14 mL), TFA (7 mL) was added 25 °C and stirred for 2 hrs. LCMS showed the reaction was completed. The residue was concentrated in vacuum. Compound ethyl 1- (methylamino)cyclobutane-1-carboxylate (3 g, crude) was obtained as a yellow oil. LC-MS (ES+, m/z): 158.2 [(M+H)+]; Rt=0.187 min. Step 4: ethyl (E)-1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1-carboxylate
[00842] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (1.57 g, 9.50 mmol, 1.2 eq) in DMF (15 mL) was added BOP (5.25 g, 11.88 mmol, 1.5 eq) DIPEA (10.24 g, 79.19 mmol, 10 eq) finally added ethyl 1-(methylamino)cyclobutane-1-carboxylate (1.5 g, 7.92 mmol, 1 eq) in one portion at 0 °C under N2, then heated to 16 °C and stirred for 4 hrs. LCMS showed the reaction was completed. The residue was poured into water (20 mL). The aqueous phase was extracted with ethyl acetate (30 mL*3). The combined organic phase was washed with saturated brine (30 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (column: Waters Xbridge BEH C18 100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 20%-50%, 8min) to give ethyl (E)-1-(4- (dimethylamino)-N-methylbut-2-enamido)cyclobutane-1-carboxylate (230 mg, 857.09 µmol, 10.82% yield) as a yellow oil. LC-MS (ES+, m/z): 269.1[(M+H)+]. Rt=1.355 min. Step 5: (E)-1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1-carboxylic acid
[00843] To a mixture of ethyl (E)-1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1- carboxylate (200 mg, 745.29 µmol, 1 eq) in THF (1.5 mL,) H2O (0.5 mL) was added LiOH (62.55 mg, 1.49 mmol, 2 eq) in one portion at 16 °C under N2. The mixture was stirred at 16 °C for 4 hr. LCMS showed the reaction was completed. The residue was filtered and concentrated in vacuum. Compound (E)-
1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1-carboxylic acid (300 mg, crude) was obtained as a white solid. LC-MS (ES+, m/z): 241.3[(M+H)+]. Rt=0.453 min. Step 6: (E)-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclobutane-1- carboxamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00844] To a mixture of (E)-1-(4-(dimethylamino)-N-methylbut-2-enamido) cyclobutane-1-carboxylic acid (150 mg, 624.22 µmol, 1 eq) in DMF (1.5 mL) was added BOP (414.12 mg, 936.34 µmol, 1.5 eq) DIPEA (806.77 mg, 6.24 mmol, 10 eq) finally added 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5- methylpyrazine-2-carboxamide (93.44 mg, 312.11 µmol, 0.5 eq) in one portion at 0 °C, then allowed to warmed to 16 °C and stirred for 4 hrs. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (column: Waters Xbridge Prep OBD C18150*40mm*10um; mobile phase: [water( NH4HCO3)-ACN]; B%: 35%-65%, 8min). Compound (E)-3-((3-(2-(1-(4-(dimethylamino)-N- methylbut-2-enamido)cyclobutane-1-carboxamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2- carboxamide(10.8 mg, 20.29 µmol, 3.25% yield) was obtained as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.07 - 11.02 (m, 1H), 8.17 - 8.11 (m, 1H), 7.94 - 7.82 (m, 1H), 7.68 - 7.63 (m, 1H), 7.56 - 7.32 (m, 2H), 7.24 - 7.15 (m, 1H), 6.81 - 6.75 (m, 1H), 6.56 - 6.45 (m, 1H), 6.37 (br s, 1H), 3.37 - 3.32 (m, 2H), 2.93 (br s, 2H), 2.79 (s, 2H), 2.78 - 2.66 (m, 5H), 2.49 - 2.49 (m, 3H), 2.45 - 2.36 (m, 2H), 2.18 - 2.03 (m, 8H), 1.76 - 1.50 (m, 2H), 1.22 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 522.3[(M+H)+]. Rt=2.843 min; HRMS (EI): m/z [M]+ found:522.3168. Example 86 (Compound 213) (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2-carboxamide
[00845] To a mixture of tert-butyl (3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate (400 mg, 933.43 µmol, 1 eq) in MeOH (7 mL) was added MeOH/HCl (933.43 µmol, 30 mL, 1 eq). The mixture was stirred at 16 °C for 2 hrs. The crude was concentrated under reduced pressure to afford 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2- carboxamide as yellow solid. LC-MS (ES+, m/z): 329.3 [(M+H)+]; Rt=0.646 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M). Step 2: tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00846] To a mixture of N-(tert-butoxycarbonyl)-N-methyl-L-alanine (631.22 mg, 3.11 mmol, 1.2 eq), 1- methylimidazole (2.12 g, 25.88 mmol, 2.06 mL, 10 eq), 3-((3-(2-aminoethyl)phenyl)amino)-5- (dimethylamino)-6-ethylpyrazine-2-carboxamide (850 mg, 2.59 mmol, 1 eq) and in DMF (6 mL) was added TCFH (1.09 g, 3.88 mmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was completed. The residue was poured into ice-water (w/w = 1/1) (200 mL). The aqueous phase was extracted with ethyl acetate (100 mL *3).The combined organic phase was washed with saturated brine (100 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether : Ethyl acetate=1/1).to afford the title compound tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1 g, 1.95 mmol, 91.34% yield) as a yellow oil. LC-MS (ES+, m/z): 514.4 [(M+H)+]; Rt=0.892 min.
Step 3: (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-(dimethylamino)-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (700 mg, 1.36 mmol, 1 eq) in HCl/MeOH (60 mL). The mixture was stirred at 16°C for 2 hrs. LCMS indicated the reaction was completed. The crude was concentrated under reduced pressure to afford (S)-5-(dimethylamino)-6-ethyl-3- ((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide(700 mg, crude) as yellow solid. LC-MS (ES+, m/z): 414.3 [(M+H)+]; Rt=0.690 min. Note:HCl/MeOH (4 M):HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Then, the solution was weighed to obtained the HCl/MeOH (4 M). Step 4: (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00847] To a solution of (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (700 mg, 1.69 mmol, 1 eq) in DMF (2 mL) at ice bath. The resulting mixture was stirred at 0°C, DIEA (1.09 g, 8.46 mmol, 1.47 mL, 5 eq), and then acryloyl chloride (183.86 mg, 2.03 mmol, 165.64 µL, 1.2 eq) were added. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was completed. The crude mixture was purified by prep-HPLC column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)- ACN];B%: 30%-60%,8min to afford (S)-5-(dimethylamino)-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide(150 mg, 320.81 µmol, 18.95% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 8.10 - 7.82 (m, 1H), 7.75 (br d, J = 2.4 Hz, 1H), 7.56 (s, 1H), 7.46 (br s, 2H), 7.20 (t, J = 7.8 Hz, 1H), 6.79 (d, J = 7.6 Hz, 1H), 6.71 (dd, J = 10.3, 16.5 Hz, 1H), 6.15 - 6.01 (m, 1H), 5.70 - 5.58 (m, 1H), 4.56 (br s, 1H), 3.30 - 3.22 (m, 2H), 3.07 (s, 6H), 2.86 (s, 2H), 2.79 - 2.67 (m, 5H), 1.27 - 1.15 (m, 6H). LC-MS (ES+, m/z): 468.3 [(M+H)+]; Rt=2.535 min; HRMS:468.2704.
Example 87 (Compound 215) (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(2-fluoro-N-methylacrylamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
Step 1: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(2-fluoro-N-methylacrylamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00848] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (80 mg, 194.88 µmol, 1 eq) in DMF (0.2 mL) was added HATU (88.92 mg, 233.85 µmol, 1.2 eq) and TEA (98.60 mg, 974.39 µmol, 135.62 µL, 5 eq),2-fluoroprop-2- enoic acid (21.06 mg, 233.85 µmol, 1.2 eq). The mixture was stirred at 16 °C for 2 hours. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (20 mL*2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 30%-60%,8min) to give desired compound (S)-5-cyclopropyl-6-ethyl-3-((3-(2- (2-(2-fluoro-N-methylacrylamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (10.13 mg, 20.99 µmol, 10.77% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.04 (s, 1H), 8.16 - 7.95 (m, 2H), 7.86 - 7.79 (m, 1H), 7.47 - 7.40 (m, 2H), 7.25 - 7.18 (m, 1H), 6.83 - 6.78 (m, 1H), 5.31 - 4.81 (m, 2H), 4.75 - 4.45 (m, 1H), 3.36 - 3.27 (m, 2H), 2.94 - 2.83 (m, 4H), 2.76 - 2.64 (m, 3H), 2.34 - 2.24 (m, 1H), 1.30 - 1.23 (m, 6H), 1.11 - 1.06 (m, 4H), LC-MS (ES+, m/z): 483.3 [(M+H)+]. Rt =2.756 min. HRMS (EI): m/z [M+H]+: 483.2490.
Example 88 (Compound 216) (S)-6-ethyl-5-methyl-3-((3-(2-(2-(N-methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate
[00849] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (450 mg, 1.50 mmol, 1 eq), N-(tert-butoxycarbonyl)-N-methyl-L-alanine (366.59 mg, 1.80 mmol, 1.2 eq) 1-methylimidazole (1.23 g, 15.03 mmol, 1.20 mL, 10 eq) in DMF (8 mL) at 0 °C, TCFH (632.63 mg, 2.25 mmol, 1.5 eq) was added, the mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The reaction was poured into H2O (30 mL). The aqueous phase was extracted with ethyl acetate (10 mL*6). The combined organic phase was washed with saturated brine (30 mL), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography (column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1 g, 1.28 mmol, 85.12% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.06 (s, 1H), 8.14 (br d, J = 2.0 Hz, 1H), 7.85 (br d, J = 2.1 Hz, 1H), 7.83 - 7.76 (m, 1H), 7.67 - 7.60 (m, 1H), 7.45 (br s, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.82 (d, J = 7.7 Hz, 1H), 4.61 - 4.16 (d, 1H), 3.30 (br d, J = 6.8 Hz, 2H), 2.94 - 2.89 (m, 2H), 2.78 - 2.73 (m, 2H), 2.69 (s, 3H), 2.51 (s, 3H), 1.36 (br s, 9H), 1.25 - 1.21 (m, 3H), 1.19 - 1.15 (m, 3H). LC-MS (ES+, m/z): 485.4[(M+H)+]; Rt=0.877 min. Step 2:(S)-6-ethyl-5-methyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide
[00850] To a mixture of tert-butyl (S)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (1 g, 1.28 mmol, 1 eq) in HCl/MeOH (4 M, 20 mL, 62.53 eq) at 14 °C for 1 hour. LCMS showed the reaction was completed. The mixture was concentrated in vacuum to afford (S)-6-ethyl-5-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (430 mg, 1.12 mmol, 87.41% yield) as a yellow solid. LC-MS (ES+, m/z): 385.3[(M+H)+]; Rt=0.671 min. Note:HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (S)-6-ethyl-5-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00851] To a solution of (S)-6-ethyl-5-methyl-3-((3-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (500 mg, 1.19 mmol, 1 eq) and DIEA (767.59 mg, 5.94 mmol, 5 eq) in DMF (10 mL),acryloyl chloride (129.01 mg, 1.43 mmol, 1.2 eq) was added at 0 °C. The mixture was stirred at 0 °C for 1 h. LCMS showed the reaction was completed. The reaction was poured into H2O (50 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (50 mL), dried with anhydrous Na2SO4. Filtered and concentrated in vacuum. The residue was purified by silica gel chromatography ( column height: 250 mm, diameter: 100 mm, 100-200 mesh silica gel, Petroleum ether/Ethyl acetate=1/1, 10/1) to afford (S)-6- ethyl-5-methyl-3-((3-(2-(2-(N-methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2- carboxamide (241.3 mg, 550.26 µmol, 46.32% yield) as a yellow solid.1H NMR (400 MHz, CD3CN-d3) δ = 10.88 (br s, 1H), 7.87 (br s, 1H), 7.65 (br d, J = 8.0 Hz, 1H), 7.51 (br s, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.83 (br d, J = 7.5 Hz, 1H), 6.70 - 6.46 (m, 2H), 6.25 - 6.00 (m, 2H), 5.62 (br d, J = 10.5 Hz, 1H), 5.02 (br d, J = 7.0 Hz, 1H), 3.54 - 3.27 (m, 2H), 2.84 - 2.65 (m, 7H), 2.51 (s, 3H), 1.31 - 1.16 (m, 6H). LC-MS (ES+, m/z): 439.3[(M+H)+]; Rt=2.488min; HRMS (EI): m/z [M]+ found: 439.2481.
Example 89 (Compound 220) (E)-5-cyclopropyl-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido) cyclopropane-1- carboxamido) ethyl) phenyl) amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) carbamoyl) cyclopropyl) (methyl) carbamate
[00852] To a solution of 3-((3-(2-aminoethyl) phenyl) amino)-5-cyclopropyl-6-ethylpyrazine-2- carboxamide (450 mg, 1.24 mmol, 1 eq, HCl) in DMF (0.5 mL) was added BOP (659.99 mg, 1.49 mmol, 1.2 eq) and DIEA (1.61 g, 12.44 mmol, 2.17 mL, 10 eq), 1-((tert-butoxycarbonyl) (methyl) amino) cyclopropane-1-carboxylic acid (803.00 mg, 3.73 mmol, 3 eq). The mixture was stirred at 16 °C for 4 hours. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL), and then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (20 mL*2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 1/1), to give tert-butyl (1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) carbamoyl) cyclopropyl) (methyl) carbamate (450 mg, 774.92 µmol, 62.31% yield, 90% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.04 (s, 1H), 8.16 - 8.09 (m, 1H), 7.83 (s, 1H), 7.71 (s, 1H), 7.44 - 7.38 (m, 2H), 7.22 (t, J = 8.0 Hz, 1H), 6.81 (d, J = 7.7 Hz, 1H), 3.32 - 3.29 (m, 2H), 2.93 - 2.87 (m, 2H), 2.74 - 2.69 (m, 5H), 2.32 - 2.25 (m, 1H), 1.34 - 1.03 (m, 20H). LC-MS (ES+, m/z): 523.4 [(M+H)+]; Rt=0.886 min.
Step 2: 5-cyclopropyl-6-ethyl-3-((3-(2-(1-(methylamino) cyclopropane-1-carboxamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00853] To tert-butyl (1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) carbamoyl) cyclopropyl) (methyl) carbamate (450 mg, 861.02 µmol, 1 eq) was added HCl/MeOH (4 M, 10 mL). The mixture was stirred at 16 °C for 2 hours. LCMS indicated the reaction was completed. The reaction mixture was concentrated under reduced pressure to give 5-cyclopropyl-6-ethyl-3-((3-(2-(1- (methylamino) cyclopropane-1-carboxamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (300 mg, 710.02 µmol, 82.46% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 9.54 (br s, 2H), 8.13 (br s, 1H), 7.96 - 7.95 (m, 1H), 7.84 - 7.82 (m, 1H), 7.47 (br d, J = 6.8 Hz, 1H), 7.39 - 7.38 (m, 1H), 7.22 (s, 1H), 6.79 (s, 1H), 3.34 (br s, 2H), 2.90 (d, J = 7.5 Hz, 2H), 2.73 - 2.71 (m, 3H), 2.53 - 2.51 (m, 2H), 2.30 - 2.27 (m, 1H), 1.27 - 1.09 (m, 11H)(TFA salt). LC-MS (ES+, m/z): 423.3 [(M+H)+]; Rt=0.717 min. Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (E)-5-cyclopropyl-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido) cyclopropane-1- carboxamido) ethyl) phenyl) amino)-6-ethylpyrazine-2-carboxamide
[00854] To a solution of 5-cyclopropyl-6-ethyl-3-((3-(2-(1-(methylamino) cyclopropane-1-carboxamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (150 mg, 355.01 µmol, 1 eq) in DMF (0.2 mL) was added PYOXIM (374.45 mg, 710.02 µmol, 2 eq) and DIEA (458.83 mg, 3.55 mmol, 618.37 µL, 10 eq), (E)-4- (dimethylamino)but-2-enoic acid (91.70 mg, 710.02 µmol, 2 eq). The mixture was stirred at 16 °C for 4 hours. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL), and then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (20 mL*2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Waters Xbridge BEH C18100*30mm*10um; mobile phase: [water (NH4HCO3)-ACN]; B%: 35%-55%, 8min) to give desired compound (E)-5- cyclopropyl-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido) cyclopropane-1-carboxamido) ethyl) phenyl) amino)-6-ethylpyrazine-2-carboxamide (10.17 mg, 18.96 µmol, 5.34% yield, 99.49% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.08 - 11.01 (m, 1H), 8.12 (br s, 1H), 8.04 (t,
J = 5.7 Hz, 1H), 7.84 - 7.79 (m, 1H), 7.49 - 7.44 (m, 1H), 7.38 - 7.33 (m, 1H), 7.24 - 7.18 (m, 1H), 6.82 - 6.76 (m, 1H), 6.61 - 6.51 (m, 1H), 6.34 - 6.25 (m, 1H), 3.37 - 3.33 (m, 2H), 2.97 - 2.86 (m, 4H), 2.82 (s, 3H), 2.70 (br t, J = 7.2 Hz, 2H), 2.32 - 2.27 (m, 1H), 2.15 - 2.06 (m, 6H), 1.30 - 1.02 (m, 11H), LC-MS (ES+, m/z): 423.3 [(M+H)+]. Rt = HRMS (EI): m/z [M]+ found: 534.3177. Example 90 (Compound 223) (E)-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclopropane-1- carboxamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclopropane-1-carboxylate
[00855] NaH (1.31 g, 32.71 mmol, 60% purity, 1.5 eq) was suspend in DMF (50 mL), and then cooled to 0 °C, to a solution of ethyl 1-((tert-butoxycarbonyl)amino)cyclopropane-1-carboxylate (5 g, 21.81 mmol, 1 eq) in DMF (50 mL) was added dropwise, the resulting mixture was stirred until gas evolution ceased. MeI (4.64 g, 32.71 mmol, 2.04 mL, 1.5 eq) was added dropwise at the same temperature. The mixture was allowed to warm to 16 °C for 10 hrs under N2. LCMS indicated the reaction was completed. The reaction was poured into saturated NH4Cl solution (100 mL) and extracted with EtOAc (100 mL*2). The organic layers were combined, washed with water (100 mL*2), saturated brine (100 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 4/1) to afford ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclopropane-1- carboxylate (5 g, 16.44 mmol, 75.39% yield, 80% purity) as white solid. LC-MS (ES+, m/z): 144.2 [(M+H-100)+]; Rt=0.799 min; Step 2: 1-((tert-butoxycarbonyl)(methyl)amino)cyclopropane-1-carboxylic acid
[00856] To a solution of ethyl 1-((tert-butoxycarbonyl)(methyl)amino)cyclopropane-1-carboxylate (1 g, 4.11 mmol, 1 eq) in H2O (1 mL) and MeOH (6 mL) was added LiOH.H2O (1.72 g, 41.10 mmol, 10 eq). The mixture was stirred at 60 °C for 10 hours. LCMS indicated the reaction was completed. The crude
mixture was concentrated under reduced pressure to afford crude mixture of 1-((tert- butoxycarbonyl)(methyl)amino)cyclopropane-1-carboxylic acid (1 g, crude) as white solid. LC-MS (ES+, m/z): 116.2 [(M+H-100)+]; Rt=0.679 min. Step 3: tert-butyl (1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)carbamoyl)cyclopropyl)(methyl)carbamate
[00857] To a solution of 1-((tert-butoxycarbonyl)(methyl)amino)cyclopropane-1-carboxylic acid (287.60 mg, 1.34 mmol, 2 eq) in DMF (1 mL) was added BOP (443.21 mg, 1.00 mmol, 1.5 eq), DIEA (863.43 mg, 6.68 mmol, 1.16 mL, 10 eq), 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2- carboxamide (200 mg, 668.07 µmol, 1 eq). The mixture was stirred at 16 °C for 4 hours under N2. LCMS indicated the reaction was completed. The reaction was poured into water (50 mL) and extracted with EtOAc (30 mL*2). The organic layers were combined, washed with water (20 mL*2), saturated brine (10 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1) to afford tert-butyl (1-((3-((3- carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)carbamoyl)cyclopropyl)(methyl)carbamate (150 mg, 302.05 µmol, 45.21% yield) as yellow solid. LC-MS (ES+, m/z): 497.2 [(M+H)+]; Rt=0.891 min. Step 4: 6-ethyl-5-methyl-3-((3-(2-(1-(methylamino)cyclopropane-1- carboxamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00858] To a solution of tert-butyl (1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)carbamoyl)cyclopropyl)(methyl)carbamate (150 mg, 302.05 µmol, 1 eq) in DCM (20 mL) was added TFA (15.40 g, 135.06 mmol, 10 mL, 447.14 eq). The mixture was stirred at 16 °C for 2 hours. LCMS indicated the reaction was completed. The crude mixture was concentrated under reduced pressure to afford crude mixture of 6-ethyl-5-methyl-3-((3-(2-(1-(methylamino)cyclopropane-1- carboxamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (150 mg, crude)as yellow solid. LC-MS (ES+, m/z): 397.3 [(M+H)+]; Rt=0.526 min.
Step 5: (E)-3-((3-(2-(1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclopropane-1- carboxamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00859] To a solution of 6-ethyl-5-methyl-3-((3-(2-(1-(methylamino)cyclopropane-1- carboxamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (200 mg, 504.43 µmol, 1 eq), (E)-4- (dimethylamino)but-2-enoic acid (167.09 mg, 1.01 mmol, 2 eq, HCl) in DMF (2 mL) was added DIEA (651.94 mg, 5.04 mmol, 878.63 µL, 10 eq), PyOXim (399.04 mg, 756.65 µmol, 1.5 eq). The mixture was stirred at 16 °C for 10 hrs. LCMS indicated the reaction was completed. The reaction was poured into water (50 mL) and extracted with EtOAc (30 mL*2). The organic layers were combined, washed with water (20 mL*2), saturated brine (10 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude mixture was purified by prep-HPLC column: Waters Xbridge BEH C18 100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 25%-55%,8min to afford (E)-3-((3-(2- (1-(4-(dimethylamino)-N-methylbut-2-enamido)cyclopropane-1-carboxamido)ethyl)phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide (10 mg, 19.70 µmol, 3.91% yield) as yellow solid. 1H NMR (400 MHz, CDCl3) δ = 10.64 (s, 1H), 7.80 (br d, J = 3.4 Hz, 1H), 7.61 (br d, J = 8.0 Hz, 1H), 7.45 (s, 1H), 7.18 - 7.15 (m, 1H), 6.89 - 6.79 (m, 1H), 6.72 (d, J = 7.5 Hz, 1H), 6.34 (d, J = 15.1 Hz, 1H), 6.10 (br s, 1H), 5.45 (br d, J = 2.8 Hz, 1H), 3.60 - 3.36 (m, 2H), 2.98 (br t, J = 6.4 Hz, 2H), 2.81 (s, 3H), 2.75 - 2.64 (m, 4H), 2.46 (s, 3H), 2.15 (s, 6H), 1.84 - 1.48 (m, 2H), 1.20 (t, J = 7.5 Hz, 3H), 1.12 - 0.98 (m, 2H). LC-MS (ES+, m/z): 508.3 [(M+H)+]; Rt=2.109 min; HRMS (EI): m/z [M+H]+: 508.2993. Example 91 (Compound 224) (S,E)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate
[00860] To a solution of 1-methylimidazole (1.51 g, 18.44 mmol, 1.47 mL, 10 eq), N-(tert- butoxycarbonyl)-N-methyl-L-alanine(449.68 mg, 2.21 mmol, 1.20 eq), 3-((3-(2- aminoethyl)phenyl)amino)-5-cyclopropyl-6-ethylpyrazine-2-carboxamide hydrochloride (600 mg, 1.84 mmol, 1 eq) in DMF (5 mL), TCFH (620.81 mg, 2.21 mmol, 1.2 eq)was added at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=10/1 to 5/1) to give tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin- 2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) carbamate as yellow solid (400 mg, 721.86 µmol, 39.15% yield, 92.15% purity).1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 8.14 - 8.09 (m, 1H), 7.98 - 7.93 (m, 1H), 7.82 - 7.80 (m, 1H), 7.42 (br s, 2H), 7.21 (t, J = 7.9 Hz, 1H), 6.81 (d, J = 7.5 Hz, 1H), 4.27 (br s, 1H), 4.02 (q, J = 7.1 Hz, 2H), 2.93 - 2.88 (m, 4H), 2.71 (br s, 3H), 2.31 - 2.24 (m, 1H), 1.36 - 1.16 (m, 15H), 1.10 - 1.05 (m, 4H); LC-MS (ES+, m/z): 511.4 [(M+H)+]; Rt=0.889 min Step 2: tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino) phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl)(methyl)carbamate
[00861] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide hydrochloride (300 mg, 671.18 µmol, 1 eq, HCl) and (E)-4-((tert-butoxycarbonyl)(methyl)amino)but-2-enoic acid (175.36 mg, 814.70 µmol, 1.21 eq) in DMF (3 mL) was added DIEA (433.73 mg, 3.36 mmol, 584.54 µL, 5 eq) and then BOP (296.85 mg, 671.18 µmol, 1 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hour. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (100 mL) and then extracted with EtOAc (50 mL*3). The combined organic layers were washed with saturated brine (30
mL*2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-TLC (SiO2, PE: EtOAc = 0:1) to give tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-6- cyclopropyl-5-ethylpyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2- en-1-yl)(methyl)carbamate as yellow gum (200 mg, 329.09 µmol, 49.03% yield). LC-MS (ES+, m/z): 608.5 [(M+H)+]. Rt=0.894 min. Step 2: (S,E)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00862] To a solution of tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl)(methyl)carbamate (200 mg, 329.09 µmol, 1 eq) was added HCl/MeOH (4 M, 82.27 µL, 1 eq). The mixture was stirred at 16 °C for 2 hours. LC-MS showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 15%-45%, 8min) to give compound (S,E)- 5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide as a yellow solid (60.74 mg, 97.33 µmol, 29.57% yield, 99.61% purity, TFA). 1H NMR (400 MHz, DMSO-d6) δ = 11.04 (s, 1H), 8.81 (br s, 2H), 8.22 - 7.87 (m, 2H), 7.86 - 7.77 (m, 1H), 7.49 - 7.37 (m, 2H), 7.21 (br t, J = 7.7 Hz, 1H), 6.85 - 6.70 (m, 2H), 6.64 - 6.46 (m, 1H), 5.01 - 4.55 (m, 1H), 3.80 - 3.66 (m, 2H), 3.37 (br s, 2H), 2.96 - 2.84 (m, 4H), 2.77 - 2.65 (m, 3H), 2.63 - 2.53 (m, 3H), 2.34 - 2.23 (m, 1H), 1.31 - 1.19 (m, 6H), 1.14 - 1.03 (m, 4H)(TFA salt). LC-MS (ES+, m/z): 508.3 [(M+H)+]. Rt=2.202 min; Note:HCl/MeOH (4 M):HCl gas was bubbled into a solution MeOH at 0 °C for 0.5 h. Example 92 (Compound 229) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-2- methylpropanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide-
Step1: 6-ethyl-5-methyl-3-((3-(2-(2-methyl-2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00863] To a mixture of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (100 mg, 334.03 µmol, 1 eq) and 2-methyl-2-(methylamino)propanoic acid (39.13 mg, 334.03 µmol, 1 eq) in DMF (1 mL) was added BOP (221.61 mg, 501.05 µmol, 1.5 eq) and DIPEA (431.72 mg, 3.34 mmol, 581.83 µL, 10 eq) in one portion at 16 °C under N2. The mixture was stirred at 16 °C for 4 hours. LCMS showed the reaction was completed. The residue was poured into ice-water (w/w = 1/1) (10 mL). The aqueous phase was extracted with ethyl acetate (5 mL*3).The combined organic phase was washed with saturated brine (5 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-TLC (SiO2, Dichloromethane : Methanol= 20:1). To afford the title compound 6- ethyl-5-methyl-3-((3-(2-(2-methyl-2- (methylamino) propanamido) ethyl) phenyl)amino) pyrazine-2- carboxamide (100 mg, 250.94 µmol, 75.12% yield) as a yellow oil. LC-MS (ES+, m/z): 399.3[(M+H)+]; Rt=0.653 min. Step 2:(E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-2– methylpropanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00864] To a mixture of 6-ethyl-5-methyl-3-((3-(2-(2-methyl-2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (100mg , 250.94 µmol, 1 eq) and (E)-4-(dimethylamino)but-2-enoic acid (64.82 mg, 501.88 µmol, 2 eq) in DMF (0.2 mL) was added BOP (166.48 mg, 376.41 µmol, 1.5 eq) and DIEA (324.32 mg, 2.51 mmol, 437.09 µL, 10 eq) in one portion at 25 °C. The mixture was stirred at 25 °C for 4 hours. LCMS showed the reaction was completed. The residue was poured into water (10 mL) and extracted with ethyl acetate (5 mL*5).The combined organic phase was washed with saturated brine (5 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition).column: C18-1150*30 mm*5 µm; mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min.To afford the title compound (E)-3-((3-
(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)-2–methylpropanamido)ethyl)phenyl)amino)-6-ethyl- 5-methylpyrazine-2-carboxamide (6.18 mg, 11.84 µmol, 4.72% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 - 10.92 (m, 1H), 9.61 (br s, 1H), 8.21 - 8.11 (m, 1H), 7.89 - 7.82 (m, 1H), 7.71 - 7.62 (m, 1H), 7.47 (br d, J = 4.5 Hz, 1H), 7.40 - 7.30 (m, 1H), 7.26 - 7.16 (m, 1H), 6.81 (d, J = 7.5 Hz, 1H), 6.78 (br d, J = 2.1 Hz, 1H), 6.48 (td, J = 7.2, 14.9 Hz, 1H), 3.89 - 3.82 (m, 2H), 3.25 - 3.18 (m, 2H), 2.99 (s, 3H), 2.78 - 2.70 (m, 8H), 2.65 (br t, J = 7.3 Hz, 2H), 2.51 (br s, 3H), 1.31 (s, 6H), 1.24 (t, J = 7.4 Hz, 3H)(TFA, salt). 1H NMR (400 MHz, D2O) δ = 7.47 - 7.34 (m, 2H), 7.28 (br d, J = 5.5 Hz, 1H), 7.00 - 6.93 (m, 1H), 6.83 - 6.71 (m, 1H), 6.56 - 6.37 (m, 1H), 3.86 (d, J = 7.4 Hz, 2H), 3.41 (br t, J = 6.8 Hz, 2H), 3.00 (s, 3H), 2.88 - 2.83 (m, 6H), 2.76 (br d, J = 6.9 Hz, 2H), 2.74 - 2.68 (m, 2H), 2.45 (br d, J = 6.1 Hz, 3H), 1.30 (s, 6H), 1.20 (t, J = 7.5 Hz, 3H). LC-MS (ES+, m/z): 510.3[(M+H)+]; Rt=2.104 min. HRMS (EI): m/z [M]+ found: 510.3177 Example 93 (Compound 234) (R,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6- ethyl-5-methylpyrazine-2-carboxamide
Step 1: (R)-6-ethyl-5-methyl-3-((3-(2-(2-(methylamino)propanamido)ethyl) phenyl)amino)pyrazine- 2-carboxamide
[00865] To a mixture of N-(tert-butoxycarbonyl)-N-methyl-D-alanine (651.72 mg, 3.21 mmol, 1.2 eq) in DMF (8 mL) was added 1-methylimidazole (2.19 g, 26.72 mmol, 2.13 mL, 10 eq) and 3-((3-(2- aminoethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (800 mg, 2.67 mmol, 1 eq), finally added TCFH (1.12 g, 4.01 mmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 2 hours. LCMS showed the reaction was completed. The residue was poured into water (20 mL). The aqueous phase was extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, Petroleum ether: Ethyl acetate = 1:1). Compound tert-
butyl (R)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2- yl)(methyl)carbamate (1.2 g, 2.48 mmol, 92.67% yield) was obtained as a yellow solid. LC-MS (ES+, m/z): 485.4[(M+H)+]; Rt=0.885 min. Step 2: (R)-6-ethyl-5-methyl-3-((3-(2-(2-(methylamino)propanamido)ethyl) phenyl)amino)pyrazine- 2-carboxamide
[00866] To a mixture of tert-butyl (R)-(1-((3-((3-carbamoyl-5-ethyl-6-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (500 mg, 1.03 mmol, 1 eq) in HCl/MeOH (10 mL) in one portion at 16 °C. The mixture was stirred at 16 °C for 1 hour. LCMS showed the reaction was completed. The residue was filtered and concentrated in vacuum. Compound (R)-6-ethyl- 5-methyl-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (400 mg, crude) was obtained as a yellow solid. LC-MS (ES+, m/z): 358.4 [(M+H)+]; Rt=0.666 min. Note:HCl/MeOH (4 M): HCl was bubbled into a solution MeOH at 0 °C for 0.5 h. Step 3: (R,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00867] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (206.77 mg, 1.25 mmol, 1.2 eq) in DMF (4 mL) was added DIPEA (1.34 g, 10.40 mmol, 10 eq) and (R)-6-ethyl-5-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino) pyrazine-2-carboxamide (400 mg, 1.04 mmol, 1 eq) finally added BOP (690.21 mg, 1.56 mmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The residue was purified by prep- HPLC (column: C18-1150*30 mm*5 um; mobile phase: [water (TFA)-ACN]; B%: 1%-45%, 8min). Compound (R,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (62.76 mg, 125.11 µmol, 12.03% yield) was obtained as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.06 (br s, 1H), 9.85 - 9.70 (m, 1H), 8.20 - 8.11 (m, 1H), 8.03 - 7.84 (m, 2H), 7.69 - 7.64 (m, 1H), 7.45 - 7.41 (m, 1H), 7.26 - 7.19 (m, 1H), 6.86 - 6.77 (m, 2H), 6.64 - 6.47 (m, 1H), 5.00 - 4.53 (m, 1H), 3.92 - 3.80 (m, 2H), 3.37 - 3.26 (m, 2H), 2.90 (s, 2H), 2.80 - 2.75 (m, 11H), 2.52 - 2.50 (m, 3H), 1.31 - 1.20 (m, 6H). 1H NMR (400 MHz, D2O) δ = 7.29 - 7.23 (m, 2H), 7.20 - 7.14 (m, 1H), 6.87 - 6.82 (m, 1H), 6.73 - 6.66 (m, 1H), 6.60 - 6.48 (m, 1H), 4.85 - 4.51 (m, 1H), 3.83 - 3.71 (m, 2H), 3.49 - 3.34 (m, 2H), 2.83 - 2.80 (m, 6H),
2.79 - 2.76 (m, 2H), 2.74 - 2.57 (m, 5H), 2.34 - 2.28 (m, 3H), 1.32 - 1.10 (m, 6H) LC-MS (ES+, m/z): 496.3[(M+H)+]. Rt=2.079 min; HRMS (EI): m/z [M]+ found:496.3013. Example 94 (Compound 203) (S)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00868] To a solution of N-(4-(dimethylamino)but-2-ynoyl)-N-methyl-L-alanine (198.69 mg, 608.99 µmol, 2 eq, TFA) , BOP (202.01 mg, 456.74 µmol, 1.5 eq) , DIEA (393.54 mg, 3.04 mmol, 530.38 µL, 10 eq) in DMF (2.5 mL) was added 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine- 2-carboxamide (100 mg, 304.50 µmol, 1 eq). The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction was concentrated. The crude was purified by prep-HPLC (column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 10%-55%,8min) then it was further purified by prep-HPLC column: Phenomenex Luna C18100*30mm*5um;mobile phase: [water(TFA)-MeOH];B%: 45%-75%,10min to give (S)-5-(dimethylamino)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-ynamido) propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2- carboxamide (6.67 mg, 12.76 µmol, 4.19% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 (d, J = 3.9 Hz, 1H), 10.85 - 10.60 (m, 1H), 8.23 - 7.97 (m, 1H), 7.74 (br s, 1H), 7.55 (br d, J = 6.1 Hz, 1H), 7.52 - 7.43 (m, 2H), 7.21 (dt, J = 3.5, 7.8 Hz, 1H), 6.79 (td, J = 1.4, 7.6 Hz, 1H), 4.93 - 4.79 (m, 1H), 4.24 (br d, J = 16.0 Hz, 2H), 3.34 - 3.27 (m, 2H), 3.26 - 3.03 (m, 8H), 2.79 - 2.66 (m, 11H),1.34 - 1.21 (m, 6H)(TFA salt). LC-MS (ES+, m/z): 523.3 [(M+H)+]; Rt=2.813 min; HRMS (EI): m/z [M]+ found:523.3130;SFC:95.58%.
Example 95 (Compound 208) (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methylacrylamido)propanamido)ethyl) phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methylacrylamido)propanamido) ethyl)phenyl)amino)pyrazine-2-carboxamide
[00869] To a solution of give (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino) pyrazine-2-carboxamide hydrochloride (300 mg, 671.18 µmol, 1 eq, HCl) in THF (5 mL) and DMF (3 mL) was added DIEA (433.73 mg, 3.36 mmol, 584.54 µL, 5 eq) and prop-2-enoyl chloride (72.90 mg, 805.42 µmol, 65.67 µL, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 1 h. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 0 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was combined with another batch was purified by prep- HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 30%- 60%,8min) to give compound (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide as a yellow solid (328.65 mg, 674.20 µmol). 1H NMR (400 MHz, DMSO-d6) δ = 11.04 (br s, 1H), 8.22 - 7.75 (m, 3H), 7.51 - 7.36 (m, 2H), 7.27 - 7.16 (m, 1H), 6.87 - 6.77 (m, 1H), 6.75 - 6.58 (m, 1H), 6.16 - 5.96 (m, 1H), 5.72 - 5.53 (m, 1H), 5.14 - 4.44 (m, 1H), 3.57 - 3.17 (m, 2H), 2.99 - 2.78 (m, 4H), 2.76 - 2.65 (m, 3H), 2.34 - 2.24 (m, 1H), 1.32 - 1.16 (m, 6H), 1.14 - 1.02 (m, 4H); LC-MS (ES+, m/z): 465.2 [(M+H)+]. Rt=2.527 min.
Example 96 (Compound 209) (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methylbut-2-ynamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
Step 1: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methylbut-2-ynamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00870] To a solution of but-2-ynoic acid (61.44 mg, 730.80 µmol, 1.2 eq), DIEA (787.09 mg, 6.09 mmol, 1.06 mL, 10 eq), (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide hydrochloride (250 mg, 609.00 µmol, 1 eq) in DMF (1 mL) at 0 °C, BOP (323.22 mg, 730.80 µmol, 1.2 eq)was added. The mixture was stirred at 0 °C for 2 hrs .LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine(20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 30%-60%,8min) to give (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-methylbut-2- ynamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide as yellow solid (96.13 mg, 198.40 µmol, 32.58% yield, 98.36% purity).1H NMR (400 MHz, DMSO-d6) δ = 11.05 (d, J = 3.1 Hz, 1H), 8.12 (br s, 1H), 8.06 - 7.92 (m, 1H), 7.83 (br s, 1H), 7.45 - 7.39 (m, 2H), 7.21 (dt, J = 1.6, 7.7 Hz, 1H), 6.80 (br d, J = 7.5 Hz, 1H), 4.90 - 4.79 (m, 1H), 3.37 (br d, J = 0.9 Hz, 2H), 2.98 - 2.86 (m, 3H), 2.74 - 2.67 (m, 4H), 2.32 - 2.24 (m, 1H), 1.99 (d, J = 15.6 Hz, 3H), 1.30 - 1.18 (m, 6H), 1.10 - 1.05 (m, 4H) LC-MS (ES+, m/z): 477.3 [(M+H) +]; Rt =2.705 min; 98.36% purity; HRMS:477.2558.
Example 97 (Compound 212) (S)-5,6-dimethyl-3-((3-(2-(2-(N-methylbut-2-ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2- carboxamide
Step 1: (S)-5,6-dimethyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00871] To a solution of but-2-ynoic acid (98.30 mg, 1.17 mmol, 1.2 eq) in DMF (3 mL) was added DIPEA (1.26 g, 9.74 mmol, 1.70 mL, 10 eq) and (S)-5,6-dimethyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (360 mg, 974.40 µmol, 1 eq) , then BOP (646.44 mg, 1.46 mmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction was concentrated. The crude was purified by prep- HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 35%- 65%,8min to give (S)-5,6-dimethyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (135 mg, 309.27 µmol, 31.74% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.06 (d, J = 1.4 Hz, 1H), 8.21 (br s, 1H), 8.10 - 7.90 (m, 1H), 7.82 (br s, 1H), 7.65 (br d, J = 8.0 Hz, 1H), 7.44 (br s, 1H), 7.22 (dt, J = 1.6, 7.8 Hz, 1H), 6.82 (br d, J = 7.5 Hz, 1H), 4.96 - 4.77 (m, 1H), 3.39 - 3.23 (m, 2H), 2.99 (s, 2H), 2.81 - 2.60 (m, 3H), 2.47 (s, 3H), 2.42 (s, 3H), 2.00 (d, J = 15.3 Hz, 3H), 1.33 - 1.17 (m, 3H). LC-MS (ES+, m/z): 437.1 [(M+H)+]; Rt=2.401 min; HRMS (EI): m/z [M]+ found:437.2285;SFC:100%.
Example 98 (Compound 235) (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00872] To a solution of but-2-ynoic acid (63.61 mg, 756.65 µmol, 1.5 eq) DIPEA (651.94 mg, 5.04 mmol, 878.63 µL, 10 eq), (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (200 mg, 504.43 µmol, 1 eq) in DMF (2 mL) at 0 °C, BOP (334.65 mg, 756.65 µmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 1 h. LCMS indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 20%-65%,8min) to afford (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylbut-2- ynamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (97.03 mg, 209.50 µmol, 41.53% yield, 99.87% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.06 (d, J = 3.0 Hz, 1H), 8.18 (br s, 1H), 8.07 - 7.91 (m, 1H), 7.83 - 7.76 (m, 1H), 7.48 - 7.40 (m, 2H), 7.26 - 7.19 (m, 1H), 6.85 - 6.78 (m, 1H), 4.85 (qd, J = 7.1, 18.7 Hz, 1H), 3.39 - 3.24 (m, 2H), 3.00 - 2.67 (m, 5H), 2.56 (s, 3H), 2.30 - 2.20 (m, 1H), 2.04 - 1.97 (m, 3H), 1.31 - 1.18 (m, 3H), 1.14 - 1.05 (m, 4H); LCMS (ES+, m/z): 463.3 [(M+H)+]; Rt= 2.573 min; HRMS (EI): m/z [M]+ found: 463.2424
Example 99 (Compound 222) (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylacrylamido)propanamido) ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylacrylamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00873] To a solution of (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino) pyrazine-2-carboxamide (1 g, 2.52 mmol, 1 eq) and DIPEA (3.26 g, 25.20 mmol, 4.39 mL, 10 eq) in DMF (10 mL) was added acryloyl chloride (273.93 mg, 3.02 mmol, 246.78 µL, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 3 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: C18-1150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%-60%,8min to afford (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2-(N-methylacrylamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (307.32 mg, 606.96 µmol, 24.09% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.07 - 11.02 (m, 1H), 8.23 - 8.13 (m, 1H), 8.11 - 7.72 (m, 2H), 7.49 - 7.37 (m, 2H), 7.25 - 7.17 (m, 1H), 6.85 - 6.77 (m, 1H), 6.75 - 6.60 (m, 1H), 6.17 - 5.97 (m, 1H), 5.71 - 5.55 (m, 1H), 4.99 - 4.56 (m, 1H), 3.40 - 3.23 (m, 2H), 2.91 - 2.78 (m, 2H), 2.74 - 2.67 (m, 3H), 2.56 - 2.53 (m, 3H), 2.28 - 2.19 (m, 1H), 1.26 - 1.06 (m, 7H). LC-MS (ES+, m/z): 451.3[(M+H)+]; Rt=2.507 min; HRMS (EI): m/z [M]+ found:451.2243. Example 100 (Compound 218) (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(N-methylacrylamido) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00874] To a mixture of (S)-5-(dimethylamino)-6-methyl-3-((3-(2-(2-(methylamino) propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (900 mg, 2.25 mmol, 1 eq) in DMF (5 mL) was added DIPEA (2.91 g, 22.53 mmol, 10 eq) finally added acryloyl chloride (244.68 mg, 2.70 mmol, 1.2 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 1 hour. LCMS showed the reaction was completed. The residue was purified by prep-HPLC (column: Phenomenex Luna 80*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 25%-55%,8min). Compound (S)-5- (dimethylamino)-6-methyl-3-((3-(2-(2-(N-methylacrylamido) propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide (301.25 mg, 664.22 µmol, 29.48% yield) was obtained as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.17 - 11.11 (m, 1H), 8.12 - 7.77 (m, 2H), 7.61 - 7.55 (m, 1H), 7.52 - 7.40 (m, 2H), 7.22 (t, J = 7.8 Hz, 1H), 6.81 (d, J = 7.5 Hz, 1H), 6.73 (br dd, J = 10.4, 16.8 Hz, 1H), 6.16 (br d, J = 2.0 Hz, 1H), 5.73 - 5.60 (m, 1H), 5.10 - 4.50 (m, 1H), 3.44 - 3.22 (m, 2H), 3.13 (s, 6H), 2.88 (s, 2H), 2.77 - 2.68 (m, 3H), 2.50 (s, 3H), 1.31 - 1.17 (m, 3H). LC-MS (ES+, m/z): 454.2[(M+H)+]. Rt=2.389 min; HRMS (EI): m/z [M]+ found:454.2576. Example 101 (Compound 231) (S)-5-(isopropyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-(isopropyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00875] To a solution of (S)-5-(isopropyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (1.3 g, 3.04 mmol, 1 eq) in DMF (3 mL) was added DIEA (1.96 g, 15.20 mmol, 2.65 mL, 5 eq), and then prop-2-enoyl chloride (330.24 mg, 3.65 mmol, 297.52 µL, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 1 h under N2. LCMS indicated the reaction was completed. The crude mixture was purified by prep-HPLC column: column: C18 (250*50mm*10 um);mobile phase: [water( NH4HCO3)-ACN];B%: 35%-65%,10min to afford (S)-5-(isopropyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (200 mg, 415.29 µmol, 13.66% yield) as white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 8.08 - 7.84 (m, 1H), 7.78 (br d, J = 1.9 Hz, 1H), 7.54 (s, 1H), 7.47 - 7.40 (m, 2H), 7.20 (t, J = 7.8 Hz, 1H), 6.79 (d, J = 7.5 Hz, 1H), 6.76 - 6.62 (m, 1H), 6.15 - 6.01 (m, 1H), 5.71 - 5.57 (m, 1H), 4.99 (q, J = 7.1 Hz, 1H), 4.40 - 4.30 (m, 1H), 3.32 - 3.23 (m, 2H), 2.90 (s, 3H), 2.86 (s, 2H), 2.74 - 2.66 (m, 3H), 2.45 (s, 3H), 1.26 - 1.18 (m, 9H). LC-MS (ES+, m/z): 482.3 [(M+H)+]; Rt=2.601 min; HRMS (EI): m/z [M]+ found: 482.2842. Example 102 (Compound 225) (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00876] To a solution of (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (1.1 g, 2.66 mmol, 1 eq) in DMF (3 mL) was added DIEA (1.72 g, 13.30 mmol, 2.32 mL, 5 eq), and then prop-2-enoyl chloride (288.92 mg, 3.19 mmol, 260.28 µL, 1.2 eq) at 0 °C. The mixture was stirred at 0 °C for 1 h. LCMS indicate the reaction was completed. The reaction was poured into water (100 mL) and extracted with EtOAc (100 mL*2). The organic layers were combined, washed with water (100 mL*2), saturated brine (100 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude mixture was purified by prep-HPLC column: Phenomenex C1880*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 20%-
50%,7min. to afford (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (300 mg, 641.63 µmol, 24.12% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 8.09 - 7.84 (m, 1H), 7.82 - 7.73 (m, 1H), 7.55 (s, 1H), 7.46 - 7.36 (m, 2H), 7.20 (t, J = 7.8 Hz, 1H), 6.79 (d, J = 7.6 Hz, 1H), 6.75 - 6.62 (m, 1H), 6.16 - 6.01 (m, 1H), 5.70 - 5.59 (m, 1H), 4.99 - 4.58 (m, 1H), 3.51 (q, J = 7.0 Hz, 2H), 3.35 - 3.24 (m, 2H), 3.09 (s, 3H), 2.86 (s, 2H), 2.75 - 2.65 (m, 3H), 2.47 (s, 3H), 1.28 - 1.18 (m, 6H). LC-MS (ES+, m/z): 468.3 [(M+H)+]; Rt=2.493 min; HRMS (EI): m/z [M+H]+: 468.2710. Example 103 (Compound 401) Scheme 32
(S)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-yn-1-yl)(methyl)amino) propanamido)ethyl)-5- methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
Step 1: tert-butyldimethyl(prop-2-yn-1-yloxy)silane
[00877] To a solution of prop-2-yn-1-ol (20 g, 356.74 mmol, 21.07 mL, 1 eq) in DCM (200 mL) was added imidazole (48.57 g, 713.48 mmol, 2 eq) and TBSCl (69.90 g, 463.76 mmol, 56.83 mL, 1.3 eq) at 0 °C. The mixture was stirred at 25 °C for 2 hrs. TLC indicated the reaction was completed. The reaction mixture was quenched by addition water (500 mL) at 0 °C, and then extracted with DCM (200 mL*3). The combined organic layers were washed with saturated brine (100 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0) to give compound tert- butyldimethyl(prop-2-yn-1-yloxy)silane (53 g, 280.06 mmol, 78.50% yield) as a yellow oil.1H NMR (400 MHz, CDCl3) δ = 4.40 - 4.22 (m, 2H), 2.39 (t, J = 2.4 Hz, 1H), 0.92 (s, 9H), 0.19 - 0.08 (m, 6H). Step 2: 4-((tert-butyldimethylsilyl)oxy)-N,N-dimethylbut-2-ynamide
[00878] To a solution of tert-butyldimethyl(prop-2-yn-1-yloxy)silane (27 g, 158.52 mmol, 1 eq) in THF (250 mL) was added n-BµLi (2.5 M, 126.82 mL, 2 eq) as dropwise at -78 °C. The mixture was stirred at - 78 °C for 0.5 hr, N,N-dimethylcarbamoyl chloride (34.09 g, 317.04 mmol, 2 eq) was added. The mixture was stirred at -78 °C for 0.5 hr. TLC indicated the reaction was completed. The reaction mixture was quenched by addition water (500 mL) at 0 °C, and then extracted with DCM (200 mL*3). The combined organic layers were washed with sat. brine (100 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 10/1) to give compound 4-((tert- butyldimethylsilyl)oxy)-N,N-dimethylbut-2-ynamide (10 g, 37.70 mmol, 23.78% yield) as a yellow oil. 1H NMR (400 MHz, CDCl3-d) δ = 4.40 - 4.30 (m, 2H), 3.08 (s, 3H), 2.84 (s, 3H), 0.78 (s, 9H), 0.05 - 0.04 (m, 6H). Step 3: 4-hydroxy-N,N-dimethylbut-2-ynamide
[00879] To a solution of 4-((tert-butyldimethylsilyl)oxy)-N,N-dimethylbut-2-ynamide (5.7 g, 23.61 mmol, 1 eq) in MeCN (100 mL) was added pyridine; hydrofluoride (11.70 g, 118.06 mmol, 5 eq) at 25 °C. The mixture was stirred at 25 °C for 2 hrs. TLC showed the reaction was completed. The reaction mixture was quenched by addition water 200 mL at 0 °C, and then extracted with DCM (200 mL*3). The combined organic layers were washed with sat. brine (100 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/0 to 0/1) to give compound 4-hydroxy-N,N- dimethylbut-2-ynamide (3 g, crude) as a yellow oil. 1H NMR (400 MHz, CDCl3) δ = 6.18 - 5.70 (m, 1H),
4.42 (br s, 2H), 3.21 - 3.16 (s, 3H), 3.04 - 2.90 (s, 3H); LC-MS (ES+, m/z): 128.2 [(M+H)+]. Rt=0.123 min. Step 4: 4-(dimethylamino)-4-oxobut-2-yn-1-yl methanesulfonate
[00880] To a solution of 4-hydroxy-N,N-dimethylbut-2-ynamide (3 g, 23.60 mmol, 1 eq) in DCM (30 mL) was added TEA (11.94 g, 117.98 mmol, 16.42 mL, 5 eq), MsCl (8.16 g, 71.23 mmol, 5.51 mL, 3.02 eq) was added at 0 °C. The mixture was stirred at 25 °C for 1 h. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (200 mL) at 0 °C, and then extracted with DCM (100 mL*3). The combined organic layers were washed with sat. brine (20 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=30/1 to 0/1) to give compound 4-(dimethylamino)-4-oxobut-2-yn-1-yl methanesulfonate (1.6 g, 7.02 mmol, 29.74% yield) as a yellow oil. 1H NMR (400 MHz, CDCl3) δ = 5.01 - 4.94 (m, 2H), 3.21 - 3.18 (m, 3H), 3.14 (d, J = 0.9 Hz, 3H), 2.99 - 2.97 (m, 3H); LC-MS (ES+, m/z): 206.1 [(M+H)+]. Rt=0.264 min. Step 5: tert-butyl N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L-alaninate
[00881] To a solution of tert-butyl (2S)-2-(methylamino)propanoate;hydrochloride (1.81 g, 7.80 mmol, 1 eq, HCl) in DMF (15 mL) was added K2CO3 (3.23 g, 23.39 mmol, 3 eq) and 4-(dimethylamino)-4-oxobut- 2-yn-1-yl methanesulfonate (1.6 g, 7.80 mmol, 1 eq). The mixture was stirred at 80 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL) at 25 °C, and then extracted with EtOAc (30 mL*3). The combined organic layers were washed with sat. brine (30 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex luna c18 250mm*100mm*10um;mobile phase: [water(TFA)-ACN];B%: 5%-35%,20min) to give compound tert- butyl N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L-alaninate (1.3 g, 4.36 mmol, 55.92% yield) was obtained as a colorless oil.1H NMR (400 MHz, CDCl3-d) δ = 3.71 - 3.56 (m, 2H), 3.30 (d, J = 7.1 Hz, 1H), 3.21 (s, 3H), 2.97 (s, 3H), 2.42 (s, 3H), 1.46 (s, 9H), 1.29 (d, J = 7.0 Hz, 3H). LC-MS (ES+, m/z): 269.1 [(M+H)+]. Rt=0.691 min. Step 6: N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L-alanine
[00882] To a solution of tert-butyl N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L-alaninate (600 mg, 2.24 mmol, 1 eq) in DCM (1 mL) was added TFA (18.48 g, 162.07 mmol, 72.49 eq). The mixture was stirred at 25 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was concentrated under reduced pressure to give N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L- alanine (450 mg, crude) as a yellow gum.. LC-MS (ES+, m/z): 213.2 [(M+H)+]. Rt=0.313 min. Step 7: (S)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-yn-1-yl)(methyl)amino) propanamido)ethyl)- 5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide
[00883] To a solution of 3-((3-(2-aminoethyl)-5-methoxyphenyl)amino)-6-ethyl-5-((tetrahydro-2H- pyran-4-yl)amino)pyrazine-2-carboxamide (207.33 mg, 459.74 µmol, 1 eq, HCl) in DMF (1 mL) was added N-(4-(dimethylamino)-4-oxobut-2-yn-1-yl)-N-methyl-L-alanine (150 mg, 459.74 µmol, 1 eq, TFA), DIEA (356.51 mg, 2.76 mmol, 6 eq) and BOP (244.00 mg, 551.69 µmol, 1.2 eq). The mixture was stirred at 25°C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was quenched by addition water (50 mL), and then extracted with EtOAc (20 mL*3). The combined organic layers were washed with sat. brine (20 mL*2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC ( column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN]; B%: 15%-45%,8min) to give (S)-3-((3-(2-(2-((4- (dimethylamino)-4-oxobut-2-yn-1-yl)(methyl)amino)propanamido)ethyl)-5-methoxyphenyl)amino)-6- ethyl-5-((tetrahydro-2H-pyran-4-yl)amino)pyrazine-2-carboxamide (12.2 mg, 19.95 µmol, 4.34% yield) as white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.31 - 11.18 (m, 1H), 8.55 (br s, 1H), 7.67 - 7.51 (m, 1H), 7.34 (s, 1H), 7.31 - 7.23 (m, 1H), 6.89 - 6.81 (m, 2H), 6.42 (s, 1H), 4.21 - 4.06 (m, 4H), 3.93 (br d, J = 8.4 Hz, 2H), 3.75 (s, 3H), 3.46 - 3.35 (m, 4H), 3.15 - 3.07 (m, 3H), 2.86 (s, 3H), 2.77 - 2.70 (m, 2H), 2.67 (br s, 3H), 2.59 (q, J = 7.4 Hz, 2H), 1.87 (br d, J = 12.6 Hz, 2H), 1.66 (dq, J = 4.3, 11.9 Hz, 2H), 1.33 (br d, J = 6.8 Hz, 3H), 1.19 (t, J = 7.4 Hz, 3H), LC-MS (ES+, m/z): 609.2 [(M+H)+]. Rt=2.034 min.
Example 104 (Compound 402) Scheme 33
(S,E)-5-(dimethylamino)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-en-1- yl)(methyl)amino)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: methyl (S,E)-4-((1-(tert-butoxy)-1-oxopropan-2-yl)(methyl)amino)but-2-enoate
[00884] To a mixture of tert-butyl methyl-L-alaninate hydrochloride (9.73 g, 41.90 mmol, 1.5 eq) and TEA (8.48 g, 83.79 mmol, 3 eq) in DCM (50 mL) was added methyl (E)-4-bromobut-2-enoate (5 g, 27.93 mmol, 1 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The residue was poured into water (200 mL). The aqueous phase was extracted with ethyl acetate (100 mL*3). The combined organic phase was washed with saturated brine
(500 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-TLC (SiO2, DCM: MeOH = 20:1). Compound methyl methyl (S,E)-4-((1-(tert-butoxy)-1- oxopropan-2-yl)(methyl)amino) but-2-enoate (5 g, 19.43 mmol, 69.57% yield) was obtained as a white solid. LC-MS (ES+, m/z): 258.4[(M+H)+]. Rt =0.156 min. Step 2: (S,E)-4-((1-(tert-butoxy)-1-oxopropan-2-yl)(methyl)amino)but-2-enoic acid
[00885] To a mixture of methyl (S,E)-4-((1-(tert-butoxy)-1-oxopropan-2-yl)(methyl) amino)but-2-enoate (5 g, 19.43 mmol, 1 eq) in MeOH (30 mL) H2O (10 mL) was added LiOH.H2O (1.63 g, 38.86 mmol, 2 eq) in one portion at 25 °C. The mixture was stirred at 25 °C for 1 hour. LCMS showed the reaction was completed. The residue was filtered and concentrated in vacuum. Compound (S,E)-4-((1-(tert-butoxy)-1- oxopropan-2-yl)(methyl)amino)but-2-enoic acid (4.2 g, crude) was obtained as a yellow solid. LC-MS (ES+, m/z): 244.1[(M+H)+]. Rt=2.858 min. Step 3: tert-butyl (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alaninate
[00886] To a mixture of (S,E)-4-((1-(tert-butoxy)-1-oxopropan-2-yl)(methyl)amino) but-2-enoic acid (4.2 g, 17.26 mmol, 1 eq) and N-methylmethanamine (2.11 g, 25.89 mmol, 1.5 eq, HCl) in DMF (42 mL) was added BOP (11.45 g, 25.89 mmol, 1.5 eq) and DIPEA (17.85 g, 138.10 mmol, 8 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 1 hr. LCMS showed the reaction was completed. The residue was poured into water (60 mL) .The aqueous phase was extracted with ethyl acetate (40 mL*3). The combined organic phase was washed with saturated brine (150 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by column chromatography (SiO2, DCM: MeOH = 10:1). Compound tert-butyl (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L- alaninate (2.6 g, 9.62 mmol, 55.71% yield) was obtained as a white solid. LC-MS (ES+, m/z): 271.4[(M+H)+]; Rt=0.509 min. Step 4: (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alanine
[00887] To a mixture of tert-butyl (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alaninate (2.6 g, 9.62 mmol, 1 eq) in TFA (20 mL) and DCM (20 mL) The mixture was stirred at 25 °C for 12 hours. LCMS showed the reaction was completed. The mixture was filtered and concentrated in vacuum. Compound (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alanine (4 g, crude) was obtained as a yellow solid. LC-MS (ES+, m/z): 215.3[(M+H)+]. Rt=0.145 min.
Step 5: (S,E)-5-(dimethylamino)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-en-1- yl)(methyl)amino)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00888] To a mixture of (E)-N-(4-(dimethylamino)-4-oxobut-2-en-1-yl)-N-methyl-L-alanine (652.42 mg, 3.04 mmol, 10 eq) and 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2- carboxamide (100 mg, 304.50 µmol, 1 eq) in DMF (1 mL) was added BOP (269.35 mg, 608.99 µmol, 2 eq) and DIPEA (590.31 mg, 4.57 mmol, 10 eq) in one portion at 25 °C under N2. The mixture was stirred at 25 °C for 10 hours. LCMS showed the reaction was completed. The residue was poured into water (10 mL). The aqueous phase was extracted with ethyl acetate (10 mL*3). The combined organic phase was washed with saturated brine (50 mL*1), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (column: Phenomenex C1880*40mm*3um;mobile phase: [water( NH4HCO3)-ACN]; B%: 20%-50%, 8min). Compound (S,E)-5-(dimethylamino)-3-((3-(2- (2-((4-(dimethylamino)-4-oxobut-2-en-1-yl)(methyl)amino) propanamido) ethyl)phenyl)amino)-6- ethylpyrazine-2-carboxamide (10.74 mg, 17.41 µmol, 36.08% yield) was obtained as a white solid.1H NMR (400 MHz, DMSO-d6) δ = 11.11 (s, 1H), 7.86 (s, 1H), 7.76 - 7.73 (m, 1H), 7.58 (s, 1H), 7.48 - 7.43 (m, 2H), 7.20 (t, J = 7.9 Hz, 1H), 6.81 - 6.77 (m, 1H), 6.60 - 6.52 (m, 1H), 6.51 (s, 1H), 3.39 - 3.35 (m, 1H), 3.29 (br d, J = 5.7 Hz, 1H), 3.13 - 3.08 (m, 3H), 3.06 (s, 6H), 2.99 (s, 3H), 2.84 (s, 3H), 2.79 - 2.74 (m, 2H), 2.73 - 2.68 (m, 2H), 2.08 (s, 3H), 1.25 - 1.21 (m, 3H), 1.05 (d, J = 6.8 Hz, 3H). LC-MS (ES+, m/z): 525.3[(M+H)+]. Rt=2.099 min; HRMS (EI): m/z [M]+ found:525.3309. Example 105 (Compound 403) (S)-5-(dimethylamino)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-yn-1- yl)(methyl)amino)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: (S)-5-(dimethylamino)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-yn-1- yl)(methyl)amino)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide
[00889] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-5-(dimethylamino)-6-ethylpyrazine-2- carboxamide (100 mg, 274.07 µmol, 1 eq, HCl) in DMF (1 mL) was added BOP (145.46 mg, 328.88 µmol, 1.2 eq) and DIEA (212.52 mg, 1.64 mmol, 286.42 µL, 6 eq) and N-(4-(dimethylamino)-4-oxobut-2- yn-1-yl)-N-methyl-L-alanine compound with 2,2,2-trifluoroacetaldehyde (1:1) (89.42 mg, 274.07 µmol, 1 eq, TFA). The mixture was stirred at 15 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was poured into water (20 mL) at 25 °C, and then extracted with EtOAc (10 mL * 3). The combined organic layers were washed with sat. brine (40 mL * 2), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep- HPLC (column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%- 45%,8min) to give (S)-5-(dimethylamino)-3-((3-(2-(2-((4-(dimethylamino)-4-oxobut-2-yn-1-yl)(methyl) amino)propanamido)ethyl)phenyl)amino)-6-ethylpyrazine-2-carboxamide (28.69 mg, 53.34 µmol, 19.46% yield, 97.16% purity) as yellow solid. 1H NMR (400 MHz, CD3OD-d4) δ = 7.62 (s, 1H), 7.59 - 7.54 (m, 1H), 7.24 - 7.19 (m, 1H), 6.89 - 6.84 (m, 1H), 4.17 - 4.09 (m, 1H), 4.04 - 3.96 (m, 1H), 3.86 - 3.78 (m, 1H), 3.69 - 3.60 (m, 1H), 3.57 - 3.49 (m, 1H), 3.19 - 3.16 (m, 3H), 3.15 - 3.12 (m, 6H), 2.96 - 2.92 (m, 3H), 2.89 - 2.81 (m, 4H), 2.81 - 2.79 (m, 3H), 1.47 - 1.42 (m, 3H), 1.33 - 1.27 (m, 3H) ; LC-MS (ES+, m/z): 523.3[(M+H)+]; Rt=2.130 min ; HRMS:523.3154. Example 106 (Compound 237) (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-(methyl- d3)acrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl-d3)carbamate
[00890] To a solution of N-(tert-butoxycarbonyl)-N-(methyl-d3)-L-alanine (31.69 mg, 153.65 µmol, 1 eq), 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6-ethylpyrazine-2-carboxamide (50 mg, 153.65 µmol, 1 eq),1-methylimidazole (126.16 mg, 1.54 mmol, 122.48 µL, 10 eq) in DMF (1 mL) was added TCFH (64.67 mg, 230.48 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LC-MS showed the reaction was complete. The reaction mixture was poured into water (5 mL) then extracted with EA (3 mL*3). The combined organic layers were washed with saturated brine (3 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-TLC (SiO2, PE: EA = 1:1). To afford the title compound tert-butyl (S)-(1-((3-((3-carbamoyl-6- cyclopropyl-5-ethylpyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl-d3)carbamate as a yellow solid. LC-MS (ES+, m/z): 514.2 [(M+H)+]; Rt=0.924 min. Step 2: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-((methyl- d3)amino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00891] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl-d3)carbamate (1 eq) in HCl/MeOH (3 mL, 4 M). The mixture was stirred at 16 °C for 2 hrs. LC-MS showed desired compound was detected. The reaction mixture was concentrated under reduced pressure to give a residue. To afford the title compound (S)-5- cyclopropyl-6-ethyl-3-((3-(2-(2-((methyl-d3)amino)propanamido)ethyl)phenyl)amino)pyrazine-2- carboxamide as a yellow solid. LC-MS (ES+, m/z): 414.3 [(M+H)+]; Rt=0.710 min.
Step 3: (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-(N-(methyl- d3)acrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00892] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((3-(2-(2-((methyl- d3)amino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (335 mg, 810.10 µmol, 1 eq), DMF (3 mL) was added DIPEA (523.50 mg, 4.05 mmol, 705.52 µL,5 eq) was added prop-2-enoyl chloride (65.99 mg, 729.09 µmol, 59.45 µL, 0.9 eq) in THF (1 mL) at 0 °C. The mixture was allowed to 16 °C for 1 hr. LCMS showed desired compound was detected. The reaction mixture was poured into water (5 mL), then extracted with EtOAc (3mL*3). The combined organic layers were washed with saturated brine (3 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (TFA condition; Phenomenex C1880*30mm*3um; mobile phase: [water(TFA)-MeCN];B%: 40%-70%,8min) to afford the little compound (S)-5-cyclopropyl-6- ethyl-3-((3-(2-(2-(N-(methyl-d3)acrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.03 (br s, 1H), 8.12 (br s, 1H), 7.85 (br d, J = 5.5 Hz, 1H), 7.82 (br s, 1H), 7.50 - 7.35 (m, 2H), 7.27 - 7.13 (m, 1H), 6.81 (d, J = 7.5 Hz, 1H), 6.69 (br dd, J = 10.5, 16.6 Hz, 1H), 6.13 - 5.97 (m, 1H), 5.68 - 5.57 (m, 1H), 4.98-4.51 (m, 1H), 3.45 - 3.19 (m, 2H), 2.90 (q, J = 7.5 Hz, 2H), 2.77 - 2.67 (m, 2H), 2.31 - 2.24 (m, 1H), 1.27 (t, J = 7.5 Hz, 4H), 1.19 (d, J = 7.3 Hz, 2H), 1.16 - 1.06 (m, 4H). LC-MS (ES+, m/z): 468.2 [(M+H)+]; Rt=2.950 min. LC-MS 97.20 % purity. HRMS (EI): 468.2791 m/z [M]+ found: Example 107 (Compound 239) (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-methylpyrazine-2-carboxamide
[00893] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (65.46 mg, 395.23 µmol, 1.1 eq, HCl) in DMF (2 mL) was added DIPEA (464.37 mg, 3.59 mmol, 625.83 µL, 10 eq), then (S)-5-(dimethylamino)- 3-((3-fluoro-5-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide (150 mg, 359.30 µmol, 1 eq) was added at 0 °C, then to a mixture was added BOP (238.37 mg, 538.95 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hours under N2. LCMS showed the reaction was completed. The residue was filtered and concentrated. The residue was purified by prep-HPLC (TFA) (column: C18-1150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 5%-50%, 8 min) to afford (S,E)-5-(dimethylamino)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)-5- fluorophenyl)amino)-6-methylpyrazine-2-carboxamide (11.91 mg, 22.08 µmol, 6.15% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ =11.32 - 11.27 (m, 1H), 9.84 (br s, 1H), 8.10 - 7.89 (m, 1H), 7.83 (br s, 1H), 7.68 (br d, J = 12.0 Hz, 1H), 7.47 (br s, 1H), 7.07 (s, 1H), 6.85 - 6.76 (m, 1H), 6.62 - 6.46 (m, 2H), 4.96 -4.56 (m, 1H), 3.89 (br d, J = 6.7 Hz, 2H), 3.33 - 3.25 (m, 2H), 3.11 (s, 6H), 2.89 (s, 2H), 2.79 - 2.68 (m, 9H), 2.48 (s, 3H), 1.29 - 1.20 (m, 3H)(TFA, salt); LC-MS (ES+, m/z): 529.3[(M+H)+]; Rt=2.102 min, 97.91% purity. HRMS (EI): m/z [M]+ found: 529.3085 Example 108 (Compound 241) (E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido)ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide
[00894] To a solution of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (500.00 mg, 636.42 µmol, 40% purity, 9.91e-1 eq, TFA) in DMF (3 mL) was added DIPEA (830.13 mg, 6.42 mmol, 1.12 mL, 10 eq), 3-((3-(2-aminoethyl)phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide (200 mg, 642.30 µmol, 1 eq) and BOP (426.12 mg, 963.45 µmol, 1.5 eq) at 16 °C. The mixture was stirred at 16 °C for 2 hrs. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC (column: Phenomenex C1880*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min) to afford (E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N- methylbut-2-enamido)acetamido) ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide (121.59 mg, 185.02 µmol, 28.81% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.13 - 10.99 (m, 1H), 9.80 - 9.61 (m, 1H), 8.03 (br t, J = 5.6 Hz, 2H), 7.83 - 7.76 (m, 1H), 7.49 - 7.39 (m, 2H), 7.27 - 7.18 (m, 1H), 6.91 - 6.68 (m, 2H), 6.63 - 6.49 (m, 1H), 4.03 - 3.81 (m, 4H), 3.37 - 3.33 (m, 2H), 3.05 - 3.03 (m, 1.5H), 2.81 - 2.70 (m, 9.5H), 2.57 - 2.55 (m, 3H), 2.28 - 2.21 (m, 1H), 1.13 - 1.05 (m, 4H)(TFA salt). LC- MS (ES+, m/z):494.3 [(M+H)+]; Rt=2.088 min; HRMS (EI): m/z [M]+ found: 494.2855. Example 109 (Compound 242) (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5- cyclopropyl-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide
[00895] To a solution of azetidine hydrochloride (28.40 mg, 303.61 µmol, 1.1 eq), NaI (124.12 mg, 828.04 µmol, 3 eq), DIPEA (356.73 mg, 2.76 mmol, 480.76 µL, 10 eq) in DMA (1 mL) at 20 °C, (S,E)-3- ((3-(2-(2-(4-bromo-N-methylbut-2-enamido) propanamido)ethyl)phenyl)amino)-5-cyclopropyl-6- methylpyrazine-2-carboxamide (150 mg, 276.01 µmol, 1 eq) was added. The mixture was stirred at 20 °C for 12 h. LCMS indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN];B%: 30%) to give (S,E)-3-((3-(2-(2-(4-(azetidin-1-yl)-N-methylbut-2- enamido)propanamido)ethyl) phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide (5.85 mg, 11.26 µmol, 4.08% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.13 - 10.98 (m, 1H), 8.24 - 8.12 (m, 1H), 8.10 - 7.72 (m, 2H), 7.49 - 7.35 (m, 2H), 7.26 - 7.17 (m, 1H), 6.84 - 6.78 (m, 1H), 6.60 - 6.28 (m, 2H), 5.02 - 4.46 (m, 1H), 3.32 - 3.03 (m, 8H), 2.85 - 2.64 (m, 5H), 2.56 (s, 3H), 2.28 - 2.21 (m, 1H), 2.05 - 1.77 (m, 2H), 1.17 (br d, J = 7.2 Hz, 3H), 1.14 - 1.04 (m, 4H); LC-MS (ES+, m/z): 520.3 [(M+H)+]. Rt=2.132 min; HRMS (EI): m/z [M]+ found: 520.3032. Example 110 (Compound 243) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)- 5,6-diethylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)phenyl)amino)-5,6-diethylpyrazine-2-carboxamide
[00896] To a mixture of(E)-4-(dimethylamino)but-2-enoic acid (91.43 mg, 552.07 µmol, 1.1 eq, HCl) in DMF (0.5 mL) was added DIEA (648.65 mg, 5.02 mmol, 874.19 µL, 10 eq) and(S)-5,6-diethyl-3-((3-(2- (2-(methylamino)propanamido)ethyl phenylamino) pyrazine-2-carboxamide (200 mg, 501.88 µmol,1 eq), and then BOP (332.96 mg, 752.82 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 2 hr. LCMS showed the reaction was completed. The residue was poured into water (10 mL) and then extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition) (column: Phenomenex Luna C18150*30mm*5um; mobile phase: [water(TFA)-ACN]; B%: 20%-50%, 8min) to afford the title compound (S,E)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-enamido propanamido)ethyl)phenyl)amino)-5,6-diethylpyrazine-2- carboxamide (26.08 mg, 51.02 µmol, 10.16% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.22 - 10.90 (m, 1H), 9.76 - 9.52 (m, 1H), 8.22 - 8.10 (m, 1H), 7.92 (br t, J = 5.6 Hz, 1H), 7.90 - 7.80 (m, 1H), 7.66 - 7.59 (m, 1H), 7.52 (s, 1H), 7.28 - 7.18 (m, 1H), 6.90 - 6.73 (m, 2H), 6.66 - 6.42 (m, 1H), 5.07 - 4.44 (m, 1H), 3.93 - 3.77 (m, 2H), 3.32 - 3.27 (m, 2H), 2.90 (s, 2H), 2.88 - 2.82 (m, 2H), 2.81 - 2.69 (m, 11H), 1.33 - 1.21 (m, 9H)(TFA salt). 1H NMR (400 MHz, D2O) δ = 7.56 - 7.44 (m, 1H), 7.32 - 7.24 (m, 1H), 7.24 - 7.08 (m, 1H), 6.86 (br d, J = 7.2 Hz, 1H), 6.80 - 6.55 (m, 1H), 6.54 (br s, 1H), 4.84 (br d, J = 7.3 Hz, 1H),3.86 - 3.67 (m, 2H), 3.54 - 3.33 (m, 2H), 2.84 - 2.63 (m, 15H), 1.35 - 1.16 (m, 9H). LC-MS (ES+, m/z): 510.4[(M+H)+]; Rt=2.199 min. HRMS (EI): m/z [M]+ found: 510.3169. Example 111 (Compound 244) (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-ynamido) propanamido) ethyl) phenyl) amino)-6- ethyl-5-methylpyrazine-2-carboxamide
Step 1: (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-ynamido) propanamido) ethyl) phenyl) amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00897] To a solution of 4-(dimethylamino)but-2-ynoic acid (148.81 mg, 1.17 mmol, 3 eq) (150 mg, 390.14 µmol, 1 eq) in DMF (3 mL) was added DIEA (504.23 mg, 3.90 mmol, 679.56 µL, 10 eq) (S)-6- ethyl-5-methyl-3-((3-(2-(2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide at 0 °C, and then BOP (517.66 mg, 1.17 mmol, 3 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hr. LCMS showed the reaction was completed. The reaction mixture was quenched by addition water (50 mL), and then extracted with EtOAc (30 mL * 3). The combined organic layers were washed with saturated brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 15%-45%,8min) to give (S)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-ynamido) propanamido) ethyl) phenyl) amino)-6-ethyl-5- methylpyrazine-2-carboxamide as yellow solid (96.13 mg, 198.40 µmol, 32.58% yield, 98.36% purity).1H NMR (400 MHz, DMSO-d6) δ = 11.11 - 11.01 (m, 1H), 8.05 (br t, J = 5.6 Hz, 2H), 7.90 - 7.81 (m, 1H), 7.71 - 7.63 (m, 1H), 7.47 - 7.41 (m, 1H), 7.26 - 7.19 (m, 1H), 6.85 - 6.80 (m, 1H), 4.89 - 4.78 (m, 1H), 4.44 - 4.24 (m, 2H), 3.40 - 3.24 (m, 2H), 3.08 - 3.06 (m, 2H), 2.87 - 2.68 (m, 10H), 2.77 - 2.66 (m, 1H), 2.50 (br s, 3H), 1.36 - 1.20 (m, 6H) LC-MS (ES+, m/z): 494.3 [(M+H) +]; Rt =2.122 min; HRMS (EI): m/z [M+H]+:494.2875. Example 112 (Compound 245) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) ethyl)-5- fluorophenyl)amino)-5,6-dimethylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)-5- fluorophenyl)amino)-5,6-dimethylpyrazine-2-carboxamide
[00898] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (64.27 mg, 388.09 µmol, 1.5 eq, HCl) in DMF (1 mL) was added DIPEA (334.39 mg, 2.59 mmol, 450.65 µL, 10 eq), (S)-3-((3-fluoro-5-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (130 mg, 258.73 µmol, 1 eq, TFA), and then BOP (171.64 mg, 388.09 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex C1880*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 15%-45%,8min to afford (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N- methylbut-2-enamido)propanamido)ethyl)-5-fluorophenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (47.03 mg, 92.76 µmol, 35.85% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.32 - 11.21 (m, 1H), 9.78 - 9.56 (m, 1H), 8.35 - 8.20 (m, 1H), 7.96 - 7.96 (m, 1H), 8.09 - 7.86 (m, 1H), 7.82 (br d, J = 11.9 Hz, 1H), 7.06 - 7.00 (m, 1H), 6.86 - 6.74 (m, 1H), 6.66 - 6.48 (m, 2H), 5.01 - 4.51 (m, 1H), 3.90 - 3.80 (m, 2H), 3.34 - 3.29 (m, 2H), 2.91 - 2.88 (m, 2H), 2.78 - 2.69 (m, 9H), 2.52 (br s, 3H), 2.45 - 2.43 (m, 3H), 1.29 - 1.20 (m, 3H)(TFA salt). LC-MS (ES+, m/z): 500.3[(M+H)+]; Rt=2.072 min; HRMS:500.2759. Example 113 (Compound 246) (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2- carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2- carboxamide
[00899] A solution of benzotriazol-1-yloxytris(dimethylamino)-phosphonium hexafluorophosphate (429 mg, 0.970 mmol, 3 eq) in N,N-dimethylformamide (1 mL) was added to a mixture of (E)-4- [bis(trideuteriomethyl)amino]but-2-enoic acid hydrochloride (290 mg, 0.970 mmol, 3 eq) with lithium chloride as an impurity, (S)-6-ethyl-5-(ethyl(methyl)amino)-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide hydrochloride (150 mg, 0.323 mmol, 1 eq) and N,N-diisopropylethylamine (0.45 mL, 2.59 mmol, 8 eq) in N,N-dimethylformamide (0.5 mL) at 0 oC. After 1h the reaction was diluted with ethyl acetate (20 mL) and quenched with saturated sodium bicarbonate (10 mL) at 0 oC. The organic phase was washed with 5% lithium chloride (3 x 10 mL) and brine (10 mL). The organic phase was dried over sodium sulfate and the solvent was removed under reduced pressure. The residue was subjected to flash chromatography (0 - 40 % methanol / dichloromethane). The clean fractions containing product were combined and the solvent was removed under reduced pressure. The residue was co-evaporated with acetonitrile (10 mL). The residue was taken up in acetonitrile (10 mL) and water (10 mL), and subjected to lyophilization, providing (S,E)-3-((3-(2-(2- (4-(bis(methyl-d3)amino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5- (ethyl(methyl)amino)pyrazine-2-carboxamide (61 mg, 0.112 mmol, 34.53 % yield). 1H NMR (400 MHz, DMSO-d6) δ 11.12 (s, 1H), 7.85 (s, 1H), 7.75 (s, 1H), 7.55 (s, 1H), 7.51 – 7.42 (m, 2H), 7.21 (t, J = 7.9 Hz, 1H), 6.80 (d, J = 7.5 Hz, 1H), 6.65 – 6.57 (m, 1H), 6.56 – 6.41 (m, 1H), 4.99 (m, 1H), 3.47 (q, J = 7.2 Hz, 2H), 3.33 – 3.20 (m, 2H), 3.05 (s, 3H), 3.03 – 2.93 (m, 2H), 2.85 (s, 2H), 2.80 – 2.65 (m, 5H), 1.31 – 1.14 (m, 9H). LC-MS (ES+, m/z): 545.3 [(M+H)+]; Rt = 3.818 min.
Example 114 (Compound 247) (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(isopropyl(methyl)amino)-6-methylpyrazine-2- carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(isopropyl(methyl)amino)-6-methylpyrazine-2- carboxamide
[00900] A solution of 5-[isopropyl(methyl)amino]-6-methyl-3-[3-[2-[[(2S)-2- (methylamino)propanoyl]amino]ethyl]anilino]pyrazine-2-carboxamide;methane;hydrochloride (120 mg, 0.25 mmol, 1 eq) and (E)-4-[bis(trideuteriomethyl)amino]but-2-enoic acid (135 mg, 1.002, 4.0 eq) in DMF (0.25 mL) was added DIPEA (194 mg, 1.5 mmol, 0.26 mL, 5 eq) stirred at 0 °C followed by addition of HOBt (444 mg, 1.002 mmol, 4.0 eq) . The suspension was clear and then turned to dark brown. The reaction was stirred at same temperature for 3hrs. LCMS indicated the reaction was not complete. Ethyl acetate (10 mL) was added at 0 °C. The combined organic layers were washed with sodium bicarbonate (sat.) 2X and then brine 2X. The combined organic layers were dried over sodium sulfate. The solvent was concentrated to give as yellow solid. (170mg). The mixture was purified using silica gel normal phase column 24g eluting dcm to 10% methanol in dcm in 30 minutes. The product was collected and were concentrated and lyophilized to give (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N- methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5-(isopropyl(methyl)amino)-6-methylpyrazine- 2-carboxamide (29 mg, 0.0532 mmol, 21.2% yield) as off white solid. 1H NMR (400 MHz, DMSO) δ 11.12 (s, 1H), 7.92 (s, 1H), 7.81 (s, 1H), 7.61 – 7.35 (m, 3H), 7.22 (t, J = 7.7 Hz, 1H), 6.88 – 6.70 (m, 2H), 6.70 – 6.40 (m, 1H), 4.99 (d, J = 7.5 Hz, 1H), 4.48 – 4.23 (m, 1H), 3.66 (s, 1H), 2.90 (d, J = 6.1 Hz, 6H), 2.71 (s, 4H), 2.45 (d, J = 2.2 Hz, 4H), 1.43 – 0.99 (m, 11H). LC-MS (ES+, m/z): 545.3 [(M+H)+]; Rt=3.906 min. Example 115 (Compound 248)
(S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide
Step 1. (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide
[00901] To a slurry of (E)-4-[bis(trideuteriomethyl)amino]but-2-enoic acid;chlorolithium;hydrochloride (248.49 mg, 831.5 µmol, 3.0 eq) in DMF (0.7 mL) was added DIEA (358.21 mg, 2.77 mmol, 0.48 mL, 10 eq) and (S)-5-cyclopropyl-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide(120mg, 277.17µmol, 1eq) , then BOP (367.76 mg, 831.5 µmol, 3 eq) in 0.8ml DMF was added. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction was concentrated and purified by silica gel column to give (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-cyclopropyl-6-methylpyrazine-2-carboxamide (35 mg, 66.8 µmol, 24.09% yield) as yellow solid. 1H NMR (400 MHz, CDCl3) δ 10.71 (s, 1H), 7.85 (s, 1H), 7.49 (m, 2H), 7.20 (m, 1H), 6.87 - 6.80 (m, 2H), 6.41 m, 2H), 5.94 (s, 1H), 5.18(m, 1H), 3.63 (m, 1H), 3.45 (m, 1H), 3.20 – 3.09 (m, 2H), 2.87 (s, 3H), 2.79 (m, 2H), 2.56 (m, 3H), 2.11 (m, 1H), 1.35 -01.32 (m, 3H), 1.20 (m, 2H), 1.11 (m, 2H). LC-MS (ES+, m/z): 514.3 [(M+H)+]; Rt=3.790 min
Example 116 (Compound 249) (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
[00902] To a mixture of (E)-4-[bis(trideuteriomethyl)amino]but-2-enoic acid (1.50 eq, 164 mg, 0.631 mmol) and N,N-Diisopropylethylamine (10.0 eq, 0.73 mL, 4.20 mmol) in DMF (0.75mL), was added 6- ethyl-5-[isopropyl(methyl)amino]-3-[3-[2-[[(2S)-2- (methylamino)propanoyl]amino]ethyl]anilino]pyrazine-2-carboxamide;hydrochloride (1.00 eq, 201 mg, 0.420 mmol). The mixture was cooled to 0oC under nitrogen, a solution of BOP (1.50 eq, 279 mg, 0.631 mmol) in DMF (0.75mL) was injected dropwise. The reaction was stirred at 0oC for 2 hours. The reaction mixture was diluted with EtOAc (30mL) and NaHCO3(aq) (10mL), washed with NaHCO3(aq) (1x), water (2x) and brine (1x). The organic layer was separated, dried over Na2SO4, filtered and concentrated. The crude was purified on silica gel column, 0-10% MeOH/DCM to provide (S,E)-3-((3- (2-(2-(4-(bis(methyl-d3)amino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5- (isopropyl(methyl)amino)pyrazine-2-carboxamide (61 mg,0.109 mmol, 25.96 % yield) as off-white solid. 1H NMR (400 MHz, CD3OD) δ 10.66 (s, 1H), 7.49 (d, J = 10.9 Hz, 1H), 7.40 (d, J = 8.2 Hz, 1H), 7.10 (t, J = 7.9 Hz, 1H), 6.74 (d, J = 7.6 Hz, 1H), 6.70 – 6.52 (m, 1H), 6.40 (dd, J = 25.3, 15.1 Hz, 1H), 4.96 (q, J = 7.0 Hz, 1H), 4.24 (p, J = 6.8 Hz, 1H), 3.35 (ddd, J = 42.2, 13.3, 6.3 Hz, 2H), 3.08 – 2.95 (m, 2H), 2.88 – 2.76 (m, 5H), 2.68 (dt, J = 14.8, 6.4 Hz, 5H), 1.39 – 1.07 (m, 12H). LC-MS (ES+, m/z): 559.4 [(M+H)+]; Rt=3.992 min.
Example 117 (Compound 250) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl) phenyl)amino)-5- (isopropyl(methyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl)phenyl)amino)- 5-(isopropyl(methyl)amino)-6-methylpyrazine-2-carboxamide
[00903] To a solution of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (248.82 mg, 395.88 µmol, 1.5 eq, TFA), BOP (175.09 mg, 395.88 µmol, 1.5 eq) in DMF (0.5 mL), then 3-((3-(2- aminoethyl)phenyl)amino)-5-(isopropyl(methyl)amino)-6-methylpyrazine-2-carboxamide (100 mg, 263.92 µmol, 1 eq, HCl) in DMF (0.5 mL), DIPEA (341.09 mg, 2.64 mmol, 10 eq) was added, the mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The residue was purified by prep-HPLC(column: Phenomenex Luna C18150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min) to afford (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)acetamido)ethyl)phenyl) amino)-5-(isopropyl(methyl)amino)-6-methylpyrazine-2-carboxamide (10.95 mg, 20.87 µmol, 7.91% yield, 100% purity) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.11 (d, J = 1.5 Hz, 1H), 8.24 - 7.99 (m, 1H), 7.79 (br s, 1H), 7.56 - 7.37 (m, 3H), 7.21 (dt, J = 3.2, 7.7 Hz, 1H), 6.92 - 6.67 (m, 2H), 6.64 - 6.48 (m, 1H), 4.34 (td, J = 6.6, 13.2 Hz, 1H), 4.03 - 3.94 (m, 2H), 3.93 - 3.82 (m, 2H), 3.37 - 3.25 (m, 2H), 3.04 (s, 1.5H), 2.89 (s, 3H), 2.82 - 2.77 (m, 4.5H), 2.76 - 2.66 (m, 5H), 2.44 (s, 3H), 1.20 (d, J = 6.6 Hz, 6H). LC-MS (ES+, m/z): 525.3[(M+H)+]; Rt=2.170 min. HRMS:525.3257. SFC: 100%.
Example 118 (Compound 251) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl)-5-fluorophenyl) amino)-5, 6-dimethylpyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-5, 6-dimethylpyrazin-2-yl) amino)-5-fluorophenethyl) carbamate
[00904] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-methylpyrazin-2-yl)amino)-5- fluorophenethyl)carbamate (380 mg, 896.51 µmol, 1 eq) 2,4,6-trimethyl-1,3,5,2,4,6-trioxatriborinane (2.25 g, 8.97 mmol, 2.51 mL, 50% purity, 10 eq) K2CO3 (371.71 mg, 2.69 mmol, 3 eq) in DMA (5 mL) and H2O (1.25 mL) at 16 °C, Pd(dppf)Cl2 (65.60 mg, 89.65 µmol, 0.1 eq) was added. The mixture was stirred at 100 °C for 4 h under N2. LCMS indicated the reaction was complete. The residue was dissolved in DCM (20 mL), scavenger (Pd) was added and then stirred at 25 °C for 1 h, and then filtered. The mixture was poured into water (30 mL) and extracted with DCM (20 mL*2). The organic layers was washed with water (20 mL*2), saturated brine (20 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (Petroleum ether: Ethyl acetate =1/1) to give tert-butyl (3-((3-carbamoyl-5, 6-dimethylpyrazin-2-yl) amino)-5-fluorophenethyl) carbamate (256 mg, 634.53 µmol, 70.78% yield) as yellow solid. LC-MS (ES+, m/z): 404.3 [(M+H) +]. RT=0.899 min. Step 2: 3-((3-(2-aminoethyl)-5-fluorophenyl) amino)-5, 6-dimethylpyrazine-2-carboxamide
[00905] The mixture tert-butyl (3-((3-carbamoyl-5, 6-dimethylpyrazin-2-yl) amino)-5-fluorophenethyl) carbamate (290 mg, 718.80 µmol, 1 eq) and HCl/MeOH (4 M, 40 mL, 222.59 eq) was stirred at 16 °C for
10 h. LCMS indicated the reaction was complete. The reaction mixture was concentrated under reduced pressure to give 3-((3-(2-aminoethyl)-5-fluorophenyl) amino)-5, 6-dimethylpyrazine-2-carboxamide (250 mg, crude) as yellow solid. LC-MS (ES+, m/z): 304.1 [(M+H) +]. RT=0.647 min. Step 3: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl)-5- fluorophenyl) amino)-5, 6-dimethylpyrazine-2-carboxamide
To a solution of 3-((3-(2-aminoethyl)-5-fluorophenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (100 mg, 329.67 µmol, 1 eq) (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (198.03 mg, 494.50 µmol, 50% purity, 1.5 eq), BOP (218.71 mg, 494.50 µmol, 1.5 eq) in DMF (1 mL) at 16 °C, DIPEA (426.07 mg, 3.30 mmol, 574.22 µL, 10 eq) was added. The mixture was stirred at 16 °C for 1 h. LCMS indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%- 40%,8min) to afford (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl)-5- fluorophenyl) amino)-5,6-dimethylpyrazine-2-carboxamide (12.3 mg, 25.16 µmol, 7.63% yield, 99.33% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.27 (br d, J = 4.4 Hz, 1H), 9.78 - 9.61 (m, 1H), 8.28 (br s, 1H), 8.23 - 7.99 (m, 1H), 7.93 - 7.78 (m, 2H), 7.07 - 7.01 (m, 1H), 6.91 - 6.49 (m, 3H), 4.04 - 3.94 (m, 2H), 3.92 - 3.81 (m, 2H), 3.34 (br dd, J = 6.0, 12.6 Hz, 2H), 3.05 - 3.02 (m, 1H), 2.81 - 2.70 (m, 10H), 2.51 - 2.51 (m, 3H), 2.44 (s, 3H); 1H NMR (400 MHz, D2O) δ = 7.18 - 7.06 (m, 1H), 6.83 - 6.74 (m, 1H), 6.64 - 6.49 (m, 2H), 6.42 - 6.33 (m, 1H), 4.05 - 3.95 (m, 2H), 3.87 - 3.71 (m, 2H), 3.38 - 3.28 (m, 2H), 3.03 - 2.96 (m, 2H), 2.83 - 2.74 (m, 7H), 2.63 - 2.54 (m, 2H), 2.15 - 2.04 (m, 6H); LC-MS (ES+, m/z): 486.3 [(M+H)+]. RT=2.031 min; HRMS (EI): m/z [M]+ found: 486.2617. Intermediate 4D (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (3-((3-carbamoyl-6-(ethyl(methyl)amino)-5-methylpyrazin-2- yl)amino)phenethyl)carbamate
[00906] To a solution of tert-butyl (3-((3-carbamoyl-6-chloro-5-ethylpyrazin-2- yl)amino)phenethyl)carbamate, N-methylethanamine (1.17 g, 19.71 mmol, 1.69 mL, 8 eq) in DMA (10 mL) was added DIPEA (3.18 g, 24.64 mmol, 4.29 mL 10 eq) at 20°C.The mixture was stirred at 100 °C for 10 hrs. LC-MS showed the desired compound was detected. The reaction mixture was poured into water (50 mL), then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (30 mL*1) dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 0/1) .To afford the title compound tert-butyl (3-((3-carbamoyl-6-(ethyl(methyl)amino)-5- methylpyrazin-2-yl)amino)phenethyl)carbamate (900 mg, 2.10 mmol, 85.24% yield) as a yellow solid. LC-MS (ES+, m/z): 429.3[(M+H)+]; Rt=0.906 min. Step 2: 3-((3-(2-aminoethyl)phenyl)amino)-5-(ethyl(methyl)amino)-6-methylpyrazine-2- carboxamide
[00907] To a solution of tert-butyl (3-((3-carbamoyl-6-(ethyl(methyl)amino)-5-methylpyrazin-2- yl)amino)phenethyl)carbamate (900 mg, 1.94 mmol, 1 eq, HCl) in HCl/MeOH (4 M, 4.8 mL, 10 eq).The mixture was stirred at 14 °C for 2 hrs. TLC showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. To afford the title compound 3-((3-(2- aminoethyl)phenyl)amino)-5-(ethyl(methyl)amino)-6-methylpyrazine-2-carboxamide (750 mg, 2.06 mmol, crude) as a yellow solid. Step 3: tert-butyl (S)-(1-((3-((3-carbamoyl-6-(ethyl(methyl)amino)-5-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00908] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-5-(ethyl(methyl)amino)-6-methylpyrazine- 2-carboxamide (750 mg, 2.06 mmol, 1 eq, HCl), N-(tert-butoxycarbonyl)-N-methyl-L-alanine (459.53 mg, 2.26 mmol, 1.1 eq) in DMF (3 mL) was added BOP (1.36 g, 3.08 mmol, 1.5 eq) and DIPEA (2.66 g, 20.56 mmol, 3.58 mL, 10 eq).The mixture was stirred at 0 °C for 2 hrs. LC-MS showed desired compound was detected. The reaction mixture was poured into water (30 mL), then extracted with EA (3 * 30 mL). The combined organic layers were washed with saturated brine (1 * 30 mL) dried over anhydrous Na2SO4 filtered and concentrated under reduced pressure to give a residue. The residue was purified by column chromatography (SiO2, Petroleum ether/Ethyl acetate=1/1 to 0/1). To afford the little compound tert-butyl (S)-(1-((3-((3-carbamoyl-6-(ethyl(methyl)amino)-5-methylpyrazin-2-yl)amino)phenethyl)amino)-1- oxopropan-2-yl)(methyl)carbamate (800 mg, 1.56 mmol, 75.77% yield) as a yellow solid. LC-MS (ES+, m/z): 514.3 [(M+H)+]; Rt=0.881 min. Step 4: (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00909] To a solution of tert-butyl (S)-(1-((3-((3-carbamoyl-6-(ethyl(methyl)amino)-5-methylpyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (800 mg, 1.56 mmol, 1 eq) was added HCl/MeOH (4 M, 389.38 µL, 1 eq) .The mixture was stirred at 14 °C for 1 hr . TLC showed the reaction was completed. The reaction mixture was concentrated under reduced pressure to give a residue. To afford the title compound (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (700 mg, crude) as a yellow solid.
Example 119 (Compound 252) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6- ethyl-5-(ethyl (methyl) amino) pyrazine-2-carboxamide
Step 1: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethyl-5-(ethyl (methyl) amino) pyrazine-2-carboxamide
[00910] To a solution of 3-((3-(2-aminoethyl)phenyl)amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2- carboxamide (100 mg, 292.02 µmol, 1 eq) (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (175.42 mg, 438.04 µmol, 50% purity, 1.5 eq) BOP (193.74 mg, 438.04 µmol, 1.5 eq) in DMF (1 mL) at 16°C, DIPEA (377.42 mg, 2.92 mmol, 508.65 µL, 10 eq) was added. The mixture was stirred at 16°C for 1h. LCMS showed the reaction was completed. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)- ACN];B%: 15%-45%,8min) to give (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethyl-5-(ethyl(methyl)amino)pyrazine-2-carboxamide (11.6 mg, 22.10 µmol, 7.57% yield, 99.94% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.17 - 11.06 (m, 1H), 9.90 - 9.63 (m, 1H), 8.23 - 8.00 (m, 1H), 7.75 (br s, 1H), 7.59 - 7.42 (m, 3H), 7.26 - 7.18 (m, 1H), 6.92 - 6.68 (m, 2H), 6.65 - 6.49 (m, 1H), 4.04 - 3.95 (m, 2H), 3.93 - 3.81 (m, 2H), 3.46 (q, J = 7.0 Hz, 2H), 3.36 - 3.26 (m, 2H), 3.04 (s, 4H), 2.82 - 2.67 (m, 12H), 1.26 - 1.17 (m, 6H); LC-MS (ES+, m/z): 525.3 [(M+H)+]. RT=2.177 min; HRMS (EI): m/z [M]+ found: 525.3267.
Example 120 (Compound 253) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5- (ethyl(methyl)amino)-6-methylpyrazine-2-carboxamide
enamido)propanamido)ethyl)phenyl)amino)-5-(ethyl(methyl)amino)-6-methylpyrazine-2- carboxamide
[00911] To a solution of (S)-5-(ethyl(methyl)amino)-6-methyl-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (130 mg, 314.38 µmol, 1 eq), (E)-4-(dimethylamino)but-2-enoic acid (57.27 mg, 345.82 µmol, 1.1 eq, HCl) in DMF (1 mL) was added BOP (208.56 mg, 471.57 µmol, 1.5 eq) and DIEA (406.30 mg, 3.14 mmol, 547.58 µL, 10 eq). The mixture was stirred at 0 °C for 2 hrs. LC-MS, HPLC showed desired compound was detected the reaction mixture was poured into water (30 mL), then extracted with EtOAc (30 mL*3). The combined organic layers were washed with saturated brine (30 mL*1), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (TFA condition; column: Phenomenex Luna C18150*30mm*5um; mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min). To afford the title compound (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-(ethyl(methyl)amino)-6-methylpyrazine-2-carboxamide (10.3 mg, 19.59 µmol, 6.23% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.13 - 11.09 (m, 1H), 8.11 - 7.89 (m, 1H), 7.79 (br d, J = 2.0 Hz, 1H), 7.52 (br s, 1H), 7.49 - 7.43 (m, 1H), 7.40 (br s, 1H), 7.23 - 7.17 (m, 1H), 6.85 - 6.76 (m, 2H), 6.64 - 6.47 (m, 1H), 4.59 (br s, 1H), 5.00 - 4.52 (m, 1H), 3.92 - 3.80 (m, 2H), 3.50 (q, J = 7.0 Hz, 2H), 3.36 - 3.24 (m, 2H), 3.08 (s, 3H), 2.89 (s, 2H), 2.80 - 2.74 (m, 6H), 2.73 - 2.66 (m, 3H), 2.47 (s, 3H), 1.29 (s, 1H), 1.28 (s, 1H), 1.31 - 1.17 (m, 4H). LC-MS (ES+, m/z): 525.33 [(M+H)+]; Rt=2.131 min. HRMS (EI): m/z [M+H]+ found: 525.3257. SFC: 97.58%.
Example 121 (Compound 254) (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)-5- fluorophenyl)amino)-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)-5-fluorophenyl)amino)-6-methylpyrazine-2-carboxamide
[00912] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (35.16 mg, 212.32 µmol , 1.1 eq, HCl) in DMF (1 mL) was added DIPEA (249.46 mg, 1.93 mmol, 336.20 µL, 10 eq) and (S)-5-cyclopropyl-3-((3- fluoro-5-(2-(2-(methylamino) propanamido) ethyl)phenyl)amino)-6-methylpyrazine-2-carboxamide (80 mg, 193.02 µmol, 1 eq) and BOP (128.05 mg, 289.52 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The residue was poured into water (20 mL).The aqueous phase was extracted with ethyl acetate (100 mL*3).The combined organic phase was washed with brine (10 mL*3), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition) column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-ACN];B%: 30%-50%,8min To afford the title compound (S,E)-5-cyclopropyl-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) ethyl)-5- fluorophenyl) amino)-6-methylpyrazine-2-carboxamide (11.17 mg, 21.09 µmol, 10.93% yield) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.27 - 11.19 (m, 1H), 9.73 - 9.64 (m, 1H), 8.26 - 8.21 (m, 1H), 8.09 - 7.89 (m, 1H), 7.84 (br s, 1H), 7.63 - 7.55 (m, 1H), 7.01 - 6.97 (m, 1H), 6.84 - 6.76 (m, 1H), 6.64 - 6.47 (m, 2H), 5.01 - 4.52 (m, 1H), 3.95 - 3.81 (m, 2H), 3.32 - 3.26 (m, 2H), 2.88 (s, 2H), 2.78 - 2.74 (m, 6H), 2.72 - 2.66 (m, 3H), 2.56 (s, 3H), 2.30 - 2.24 (m, 1H), 1.28 - 1.19 (m, 3H), 1.15 (br s, 2H), 1.07 - 1.03 (m, 2H) . 1H NMR (400 MHz, D2O) δ = 7.00 (br d, J = 11.9 Hz, 1H), 6.79 - 6.60 (m, 2H), 6.59 - 6.44 (m, 1H), 6.35 (br d, J = 8.9 Hz, 1H), 4.90 - 4.54 (m, 1H), 3.86 - 3.73 (m, 2H), 3.46 - 3.28 (m, 2H), 2.85 - 2.79 (m, 8H), 2.72 - 2.53 (m, 3H), 2.29 (br s, 3H), 2.00 - 1.87 (m, 1H), 1.34 - 1.20 (m, 3H), 0.97 (br s, 2H), 0.79 (br s, 2H).LC-MS (ES+, m/z): 526.3[(M+H)+]; Rt=2.202 min. HRMS (EI): m/z [M]+ found: 526.2921.
Example 122 (Compound 255) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl)amino)-5- ethyl-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-ethyl-6-methylpyrazine-2-carboxamide
[00913] To a mixture of €-4-(dimethylamino)but-2-enoic acid (47.38 mg, 286.11 µmol, 1.1 eq, HCl) in DMF (1 mL) was added DIEA (336.16 mg, 2.60 mmol, 453.04 µL,10 eq) and (S)-5-ethyl-6-methyl-3-((3- (2-(2-(methylamino) propanamido) ethyl)phenyl)amino)pyrazine-2-carboxamide (100 mg, 260.10 µmol, 1 eq) and BOP (172.55 mg, 390.14 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The residue was poured into water (30 mL).The aqueous phase was extracted with ethyl acetate (20 mL*2).The combined organic phase was washed with brine (20 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition)column: Phenomenex Luna C18 150*30mm*5um;mobile phase: [water(TFA)-€];B%: 20%-50%,8min. To afford the title compound (S,E)- 3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)phenyl) amino)-5-ethyl-6- methylpyrazine-2-carboxamide (10.48 mg, 21.15 µmol, 8.13% yield) as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.13 – 11.05 (m, 1H), 9.70 – 9.59 (m, 1H), 8.23 (br s, 1H), 8.11 – 7.88 (m, 1H), 7.88 – 7.80 (m, 1H), 7.63 (br d, J = 6.5 Hz, 1H), 7.56 – 7.47 (m, 1H), 7.27 – 7.18 (m, 1H), 6.84 – 6.77 (m, 2H), 6.65 – 6.49 (m, 1H), 4.97 (d, J = 7.3 Hz, 1H), 3.82 (br s, 2H), 3.31 – 3.26 (m, 2H), 2.92 – 2.88 (m, 2H), 2.83 – 2.75 (m, 8H), 2.73 – 2.68 (m, 3H), 2.45 – 2.42 (m, 3H), 1.32 – 1.21 (m, 6H).1H NMR (400 MHz, D2O) δ = 7.52 – 7.45 (m, 1H), 7.30 – 7.17 (m, 2H), 6.86 (br d, J = 7.3 Hz, 1H), 6.77 – 6.58 (m, 1H), 6.56 – 6.39 (m, 1H), 4.87 – 4.84 (m, 1H), 3.85 – 3.72 (m, 2H), 3.53 – 3.38 (m, 2H), 2.84 – 2.78 (m, 8H), 2.77 – 2.66 (m, 5H), 2.33 (br s, 3H), 1.32 – 1.18 (m, 6H). LC-MS (ES+, m/z): 496.3[(M+H)+]; Rt=2.106 min. HRMS (EI): m/z [M]+ found: 496.2998
Example 123 (Compound 301) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl)phenyl)amino)-5,6- dimethylpyrazine-2-carboxamide
Step 1: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido) ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide
[00914] To a mixture of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (154.38 mg, 385.50 µmol, 1.1 eq) in DMF (1 mL) was added DIPEA (452.93 mg, 3.50 mmol, 10 eq) and 3-((3-(2- aminoethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (100 mg, 350.45 µmol, 1 eq) finally added BOP (232.50 mg, 525.68 µmol, 1.5 eq) in one portion at 0 °C under N2. The mixture was stirred at 0 °C for 2 hours. LCMS showed the reaction was completed. The reaction was concentrated. The residue was purified by prep-HPLC (column: Phenomenex Luna C1875*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 15%-45%, 7min). Compound (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)acetamido)ethyl)phenyl)amino)-5,6-dimethylpyrazine-2-carboxamide (10.57 mg, 22.61 µmol, 6.45% yield) was obtained as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.08 - 11.04 (m, 1H), 9.89 - 9.69 (m, 1H), 8.25 - 8.01 (m, 2H), 7.85 - 7.78 (m, 1H), 7.72 - 7.62 (m, 1H), 7.48 - 7.40 (m, 1H), 7.28 - 7.19 (m, 1H), 6.93 - 6.66 (m, 2H), 6.63 - 6.49 (m, 1H), 4.04 - 3.95 (m, 2H), 3.92 - 3.80 (m, 2H), 3.36 - 3.29 (m, 2H), 3.06 - 3.01 (m, 2H), 2.83 - 2.67 (m, 9H), 2.47 (s, 3H), 2.44 - 2.41 (m, 3H)。 NMR (400 MHz, DMSO-d6) δ = 7.65 (ddd, J = 1.4, 8.1, 14.9 Hz, 1H), 7.43 (br d, J = 12.9 Hz, 1H), 7.23 (dt, J = 3.0, 7.8 Hz, 1H), 6.91 - 6.65 (m, 2H), 6.62 - 6.46 (m, 1H), 4.03 - 3.93 (m, 2H), 3.90 - 3.79 (m, 2H), 3.35 - 3.27 (m, 2H), 3.03 - 3.01 (m, 2H), 2.79 - 2.67 (m, 9H), 2.47 - 2.45 (m, 3H), 2.42 - 2.40 (m, 3H) LC-MS (ES+, m/z): 468.3[(M+H)+]. Rt=1.957 min; HRMS (EI): m/z [M]+ found:468.2671.
Example 124 (Compound 302) (R,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) phenyl) amino)- 6-ethyl-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide
Step 3: (R,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-6-ethyl-5-(isopropyl(methyl)amino)pyrazine-2- carboxamide
[00915] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (260.85 mg, 1.58 mmol, 1.5 eq, HCl), DIPEA (1.36 g, 10.50 mmol, 1.83 mL, 10 eq) in DMF (3 mL), then added a solution of (R)-6-ethyl-5- (isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino)propanamido)ethyl) phenyl)amino)pyrazine-2- carboxamide (500.00 mg, 1.05 mmol,1 eq, HCl) in DMF (3 mL) at 0 °C, then BOP (696.59 mg, 1.58 mmol, 1.5 eq) was added at 0 °C, the mixture was stirred at 0 °C for 2 hours. LCMS showed the reaction was completed. The residue was purified by prep-HPLC(column: Phenomenex luna C18250*50mm*10 µm; mobile phase: [water(TFA)-ACN];B%: 25%-55%,10min) to afford (R,E)-3-((3-(2-(2-(4- (dimethylamino)-N-methylbut-2-enamido)propanamido) ethyl) phenyl)amino)-6-ethyl-5- (isopropyl(methyl)amino) pyrazine-2-carboxamide (109.07 mg, 193.18 µmol, 18.75% yield, 99.75% purity)) as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.10 (s, 1H), 8.12 - 7.88 (m, 1H), 7.76 (br d, J = 2.0 Hz, 1H), 7.56 - 7.42 (m, 3H), 7.21 (br t, J = 7.8 Hz, 1H), 6.87 - 6.74 (m, 2H), 6.67 - 6.45 (m, 1H), 5.02 - 4.53 (m, 1H), 4.25 (quind, J = 6.7, 13.2 Hz, 1H), 3.94 - 3.81 (m, 2H), 3.36 - 3.23 (m, 2H), 2.94 - 2.84 (m, 5H), 2.82 - 2.65 (m, 11H), 1.31 - 1.14 (m, 12H). LC-MS (ES+, m/z): 553.3[(M+H)+]; Rt=2.293 min; HRMS:553.3621. SFC:100%
Example 125 (Compound 303) (S, E)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2-(N-methyl-4-(methylamino) but-2-enamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
Step 1: tert-butyl (S, E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-(isopropylamino) pyrazin-2-yl) amino) phenethyl) amino)-1-oxopropan-2-yl) (methyl) amino)-4-oxobut-2-en-1-yl) (methyl) carbamate
[00916] To a solution of (E)-4-((tert-butoxycarbonyl)(methyl)amino)but-2-enoic acid (194.83 mg, 905.17 µmol, 1.2 eq) in DMF (3 mL) at 0 °C was added DIPEA (974.89 mg, 7.54 mmol, 10 eq) and (S)-6-ethyl- 5-(isopropylamino)-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (350 mg, 754.31 µmol, 1 eq, HCl), and then BOP (500.42 mg, 1.13 mmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 1.5 h. LCMS indicated the reaction was complete. The mixture was poured into water (20 mL) and extracted with EtOAc (10 mL*2). The organic layers was washed with water (10 mL*2), saturated brine (10 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (DCM/MeOH =10:1) to afford tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-(isopropylamino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl)(methyl)carbamate (437.5 mg, 700.26 µmol, 92.83% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.30 - 11.25 (m, 1H), 8.16 - 7.88 (m, 1H), 7.73 (br s, 1H), 7.65 - 7.56 (m, 1H), 7.47 - 7.40 (m, 1H), 7.35 - 7.19 (m, 2H), 6.87 - 6.76 (m, 2H), 6.65 - 6.36 (m, 2H), 5.09 - 4.54 (m, 1H), 4.37 - 4.26 (m, 1H), 4.03 - 3.88 (m, 2H), 3.32 (br d, J = 7.5 Hz, 2H), 2.91 - 2.79 (m, 5H), 2.76 (s, 3H), 2.65 (q, J = 7.4 Hz, 2H), 1.48 - 1.42 (m, 9H), 1.35 - 1.24 (m, 12H); LC-MS (ES+, m/z): 625.5 [(M+H)+]. RT=0.855 min.
Step 2: (S, E)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2-(N-methyl-4-(methylamino) but-2-enamido) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide
[00917] The mixture tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-(isopropylamino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1-yl)(methyl)carbamate (500 mg, 800.29 µmol, 1 eq) and HCl/MeOH (4 M, 30 mL, 149.95 eq) was stirred at 16 °C for 1.5 h. LCMS indicated the reaction was complete. The reaction mixture was concentrated under reduced pressure to give a residue. The resulting product was dissolved in DMF and filtered to give a crude. The crude was purified by prep-HPLC column: Phenomenex luna C18100*40mm*3 µm; mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min) to afford (S,E)-6-ethyl-5-(isopropylamino)-3-((3-(2-(2-(N- methyl-4-(methylamino)but-2-enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (90.4 mg, 167.67 µmol, 20.95% yield, 97.31% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.25 - 11.19 (m, 1H), 8.79 - 8.51 (m, 2H), 8.10 - 7.88 (m, 1H), 7.64 - 7.54 (m, 2H), 7.46 - 7.37 (m, 1H), 7.28 - 7.15 (m, 2H), 6.81 - 6.69 (m, 3H), 6.63 - 6.44 (m, 1H), 4.70 (s, 1H), 4.33 - 4.19 (m, 1H), 3.79 - 3.67 (m, 2H), 3.31 - 3.24 (m, 2H), 2.93 - 2.88 (m, 2H), 2.73 (br s, 3H), 2.58 (br t, J = 7.3 Hz, 5H), 1.29 - 1.17 (m, 12H); 1H NMR (400 MHz, DMSO-d6) δ = 8.08 - 7.86 (m, 1H), 7.66 - 7.57 (m, 1H), 7.44 - 7.36 (m, 1H), 7.19 (t, J = 7.8 Hz, 1H), 6.82 - 6.66 (m, 2H), 6.60 - 6.43 (m, 1H), 4.98 - 4.51 (m, 1H), 4.28 - 4.20 (m, 1H), 3.72 (br d, J = 6.5 Hz, 2H), 3.36 - 3.23 (m, 2H), 2.88 (s, 2H), 2.72 - 2.64 (m, 3H), 2.58 - 2.53 (m, 5H), 1.27 - 1.15 (m, 12H); LC-MS (ES+, m/z): 525.3 [(M+H)+]. RT=2.143 min; HRMS (EI): m/z [M+H]+ found:525.3275. Example 126 (Compound 305) (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido) ethyl)phenyl)amino)-5- isopropyl-6-methylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)phenyl)amino)-5-isopropyl-6-methylpyrazine-2-carboxamide
[00918] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (68.54 mg, 413.83 µmol, 1.5 eq, HCl) in DMF (1 mL) was added DIPEA (356.56 mg, 2.76 mmol, 480.54 µL, 10 eq), (S)-5-isopropyl-6-methyl-3- ((3-(2-(2-(methylamino)propanamido)ethyl) phenyl)amino)pyrazine-2-carboxamide (120 mg, 275.89 µmol, 1 eq, HCl) and BOP (183.03 mg, 413.83 µmol, 1.5 eq). The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%-50%,8min to afford (S,E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl) phenyl)amino)-5-isopropyl-6-methylpyrazine-2-carboxamide (27 mg, 52.95 µmol, 19.19% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.12 - 11.01 (m, 1H), 9.82 - 9.58 (m, 1H), 8.32 - 8.14 (m, 1H), 8.12 - 7.87 (m, 1H), 7.83 (br s, 1H), 7.67 - 7.56 (m, 1H), 7.56 - 7.49 (m, 1H), 7.28 - 7.19 (m, 1H), 6.87 - 6.75 (m, 2H), 6.65 - 6.45 (m, 1H), 5.04 - 4.51 (m, 1H), 3.94 - 3.79 (m, 2H), 3.34 - 3.23 (m, 3H), 2.92 - 2.87 (m, 2H), 2.80 - 2.68 (m, 9H), 2.49 - 2.47 (m, 3H), 1.30 - 1.21 (m, 9H). (TFA salt) LC-MS (ES+, m/z): 510.3[(M+H)+]; Rt=2.162 min; HRMS (EI): m/z [M+H]+ found: 510.3194. Example 127 (Compound 306) (S, E)-5-cyclopropyl-3-((5-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) pyridin-3-yl) amino)-6-ethylpyrazine-2-carboxamide
Step 1: (S, E)-5-cyclopropyl-3-((5-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido) ethyl) pyridin-3-yl) amino)-6-ethylpyrazine-2-carboxamide
[00919] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((5-(2-(2-(methylamino)propanamido)ethyl)pyridin- 3-yl)amino)pyrazine-2-carboxamide hydrochloride (50 mg, 111.62 µmol, 1 eq, HCl) in DMF (1 mL) was added (E)-4-(dimethylamino)but-2-enoic acid (17.30 mg, 104.45 µmol, 9.36e-1 eq, HCl), BOP (59.24 mg, 133.94 µmol, 1.2 eq) and DIEA (72.13 mg, 558.08 µmol, 97.21 µL, 5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hr. LC-MS showed the reaction was consumed completely. The reaction mixture was quenched by addition water (50 mL) at 15 °C, and then extracted with EtOAc (20 mL * 3). The combined organic layers were washed with sat. brine (20 mL * 2), dried over Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (column: Phenomenex Luna C1875*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 5%-35%,8min) to afford (S, E)-5- cyclopropyl-3-((5-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)pyridin-3- yl)amino)-6-ethylpyrazine-2-carboxamide as a light yellow solid (44.03 mg, 84.40 µmol, 75.62% yield, 100% purity). 1H NMR (400 MHz, DMSO-d6) δ = 11.19 (s, 1H), 10.70 - 10.05 (m, 1H), 8.78 (br s, 1H), 8.19 (br s, 1H), 8.17 - 7.94 (m, 3H), 7.91 (br s, 1H), 6.86 - 6.76 (m, 1H), 6.66 - 6.46 (m, 1H), 4.97 - 4.52 (m, 1H), 3.92 - 3.84 (m, 2H), 3.36 (br d, J = 6.0 Hz, 2H), 2.95 - 2.89 (m, 2H), 2.87 (s, 2H), 2.77 (br s, 8H), 2.66 (s, 1H), 2.34 - 2.26 (m, 1H), 1.30 - 1.18 (m, 6H), 1.14 - 1.04 (m, 4H). LC-MS (ES+, m/z): 523.3[(M+H) +]; Rt =1.753 min. HRMS (EI): m/z [M] + found: 523.3149. Example 128 (Compound 307) (S,E)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4-oxobut-2-en-1- yl)(methyl)carbamate
[00920] To a solution of €-4-((tert-butoxycarbonyl)(methyl)amino)but-2-enoic acid (189.12 mg, 878.61 µmol, 1.2 eq) and DIEA (946.26 mg, 7.32 mmol, 1.28 mL, 10 eq) in DMF (2 mL) was added (S)-6-ethyl- 5-(isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2- carboxamide (350 mg, 732.17 µmol, 1 eq, HCl), and then BOP (485.74 mg, 1.10 mmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The reaction was poured into water (15 mL) and extracted with EtOAc (10 mL*2). The organic layers were combined, washed with water (10 mL*2), saturated brine (10 ml), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by chromatography on silica thiol gel (petroleum ether/EtOAc = 1/1) TLC (plate1 Rf= 0.69) to afford tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6- (isopropyl(methyl)amino)pyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4- oxobut-2-en-1-yl)(methyl)carbamate (400 mg, 626.18 µmol, 85.52% yield) as yellow solid. LC-MS (ES+, m/z): 639.5[(M+H)+]; Rt=0.827 min. Step 2: (S,E)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N-methyl-4-(methylamino)but-2- enamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00921] A mixture of tert-butyl (S,E)-(4-((1-((3-((3-carbamoyl-5-ethyl-6- (isopropyl(methyl)amino)pyrazin-2-yl)amino)phenethyl)amino)-1-oxopropan-2-yl)(methyl)amino)-4- oxobut-2-en-1-yl)(methyl)carbamate (400 mg, 626.18 µmol, 1 eq) and HCl/MeOH (4 M, 15 mL, 95.82 eq) was stirred at 16 °C for 2 hrs. LCMS showed the reaction was completed. Filtered to give filtrate. The crude was purified by prep-HPLC column: Phenomenex Luna C1875*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 10%-40%,8min to afford (S,E)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2- (N-methyl-4-(methylamino)but-2-enamido)propanamido)ethyl)phenyl)amino) pyrazine-2-carboxamide
(101.00 mg, 175.61 µmol, 28.04% yield, HCl) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.14 - 11.07 (m, 1H), 8.74 - 8.46 (m, 2H), 8.13 - 7.83 (m, 1H), 7.76 (br s, 1H), 7.56 - 7.50 (m, 1H), 7.50 - 7.39 (m, 2H), 7.25 - 7.14 (m, 1H), 6.79 (d, J = 7.3 Hz, 1H), 6.77 - 6.66 (m, 1H), 6.63 - 6.43 (m, 1H), 5.02 - 4.51 (m, 1H), 4.25 (quin, J = 6.6 Hz, 1H), 3.90 - 3.55 (m, 2H), 3.30 - 3.24 (m, 2H), 2.93 - 2.84 (m, 5H), 2.78 - 2.63 (m, 6H), 2.57 (br s, 2H), 1.29 - 1.19 (m, 12H)(TFA, salt).1H NMR (400 MHz, D2O) δ = 8.09 - 7.63 (m, 1H), 7.54 - 7.49 (m, 1H), 7.46 - 7.40 (m, 1H), 7.20 (br t, J = 7.7 Hz, 1H), 6.82 - 6.65 (m, 2H), 6.63 - 6.38 (m, 1H), 5.00 - 4.50 (m, 1H), 4.24 (quin, J = 6.6 Hz, 1H), 3.82 - 3.59 (m, 2H), 3.33 - 3.20 (m, 2H), 2.93 - 2.84 (m, 5H), 2.76 - 2.64 (m, 6H), 2.56 (s, 2H), 1.22 - 1.16 (m, 12H)(TFA, salt). LC-MS (ES+, m/z): 539.3[(M+H)+]; Rt=2.276 min. HRMS (EI): m/z [M]+ found: 539.3473. SFC: 95.15%. Example 129 (Compound 308) 6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N-methylacrylamido) acetamido) ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 3: 6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N- methylacrylamido)acetamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00922] To a mixture of 6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino) acetamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (160 mg, 280.67 µmol, 1 eq) in DMF (3 mL) was added DIEA (362.75 mg, 2.81 mmol, 10 eq), and then added acryloyl chloride (25.40 mg, 280.67 µmol, 1 eq) in one portion at 0°C under N2. The mixture was stirred for 3 hours. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex Luna C1875*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 35%-65%,8min to afford 6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N- methylacrylamido)acetamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (10.22 mg, 21.06 µmol, 7.50% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ =11.10 (d, J = 1.5 Hz, 1H), 8.13 - 7.96 (m, 1H), 7.75 (br s, 1H), 7.56 (br d, J = 6.5 Hz, 1H), 7.47 - 7.42 (m, 2H), 7.21 (t, J = 7.8 Hz, 1H), 6.81 - 6.78 (m, 1H), 6.78 - 6.47 (m, 1H), 6.13 - 6.02 (m, 1H), 5.70 - 5.56 (m, 1H), 4.28 - 4.21 (m, 1H), 3.96 (d, J = 18.4
Hz, 2H), 3.31 (br dd, J = 7.5, 14.1 Hz, 2H), 3.02 (s, 2H), 2.86 (s, 3H), 2.81 (s, 1H), 2.73 - 2.68 (m, 4H), 1.22 - 1.19 (m, 9H). LC-MS (ES+, m/z): 482.3[(M+H)+]; Rt=2.637 min; HRMS (EI): m/z [M+H]+:482.2864. Example 130 (Compound 310) (S,E)-5-cyclopropyl-3-((2-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) propanamido)ethyl)pyridin-4-yl)amino)-6-ethylpyrazine-2-carboxamide
Step 1: tert-butyl (S)-(1-((2-(4-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)pyridin-2- yl)ethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate
[00923] To a mixture of N-(tert-butoxycarbonyl)-N-methyl-L-alanine (74.72 mg, 367.65 µmol, 1.5 eq), NMI (201.23 mg, 2.45 mmol, 195.37 µL, 10.0 eq) in DMF (2 mL) was added 3-((2-(2- aminoethyl)pyridin-4-yl)amino)-5-cyclopropyl-6-ethylpyrazine-2-carboxamide (80 mg, 245.10 µmol, 1 eq, HCl), then TCFH (82.52 mg, 294.12 µmol, 1.2 eq) was added at 0 °C and the reaction mixture was stirred at 0 °C for 2 hrs. LC-MS showed the reaction was completed. The reaction mixture was quenched by addition H2O (50 mL), then extracted with DCM (20 mL * 3). The combined organic layers were washed with saturated brine (30 mL ), dried over anhydrous Na2SO4 filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-TLC (SiO2, DCM: MeOH = 10:1) to give tert-butyl (S)-(1-((2-(4-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2-yl)amino)pyridin-2- yl)ethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (85 mg, 166.14 µmol, 67.78% yield) as a yellow solid. LC-MS (ES+, m/z): 512.3[(M+H)+]. Rt=0.720 min. Step 2: (S)-5-cyclopropyl-6-ethyl-3-((2-(2-(2-(methylamino)propanamido)ethyl)pyridin-4- yl)amino)pyrazine-2-carboxamide
[00924] A solution of (S)-tert-butyl (1-((2-(4-((3-carbamoyl-6-cyclopropyl-5-ethylpyrazin-2- yl)amino)pyridin-2-yl)ethyl)amino)-1-oxopropan-2-yl)(methyl)carbamate (85 mg, 166.14 µmol, 1.0 eq) in HCl/MeOH (4 M, 3 mL, 72.23 eq) was stirred at 25 °C for 2 hrs. LC-MS showed reaction was completed. The reaction mixture was concentrated under reduced pressure to give (S)-5-cyclopropyl-6-ethyl-3-((2-(2- (2-(methylamino)propanamido)ethyl)pyridin-4-yl)amino)pyrazine-2-carboxamide(90 mg, crude, HCl) as a yellow solid. LC-MS (ES+, m/z): 412.3[(M+H)+]. Rt=0.568 min. Step 3: (S,E)-5-cyclopropyl-3-((2-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)pyridin-4-yl)amino)-6-ethylpyrazine-2-carboxamide.
[00925] To a solution of (S)-5-cyclopropyl-6-ethyl-3-((2-(2-(2-(methylamino)propanamido)ethyl)pyridin- 4-yl)amino)pyrazine-2-carboxamide (70 mg, 156.26 µmol, 1.0 eq, HCl) and (E)-4-(dimethylamino)but-2- enoic acid (38.82 mg, 234.40 µmol, 1.5 eq, HCl), DIEA (201.96 mg, 1.56 mmol, 272.18 µL, 10 eq) in DMF (2 mL) was added BOP (103.67 mg, 234.40 µmol, 1.5 eq) at 0 °C, then the reaction mixture was stirred at 0 °C for 2 hrs. LC-MS showed reaction was completed. The reaction mixture was quenched by addition H2O (20 mL), extracted with DCM (10 mL * 3). The combined organic layers were washed with saturated brine (10 mL), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (basic condition column: Phenomenex C18 75*30mm*3um; mobile phase: [water(NH3H2O+NH4HCO3)-ACN]; B%: 10%-50%, 8 min) to give (S,E)- 5-cyclopropyl-3-((2-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)pyridin-4- yl)amino)-6-ethylpyrazine-2-carboxamide (13.3 mg, 25.45 µmol, 16.29% yield, 100% purity) as a white solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.43 - 11.34 (m, 1 H), 8.32 - 8.17 (m, 2 H), 8.12 - 7.75 (m, 2 H), 7.49 - 7.32 (m, 2 H), 6.69 - 6.29 (m, 2 H), 5.06 – 4.44 (m, 1 H), 3.52 - 3.25 (m, 2 H), 3.01 – 2.89 (m, 4 H), 2.87 - 2.68 (m, 4 H), 2.75 - 2.64 (m, 1 H), 2.38 - 2.28 (m, 1 H), 2.16 - 2.03 (m, 6 H), 1.33 - 1.23 (m, 4 H), 1.21 - 1.09 (m, 6 H). LC-MS (ES+, m/z): 523.2[(M+H)+]. Rt=1.773 min. HRMS (EI): m/z [M+H]+ found: 523.3130.
Example 131 (Compound 315) (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
Step 1: (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2-(N- methylacrylamido)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide
[00926] To a solution of (S)-6-ethyl-5-(isopropyl(methyl)amino)-3-((3-(2-(2- (methylamino)propanamido)ethyl)phenyl)amino)pyrazine-2-carboxamide (200 mg, 418.38 µmol, 1 eq, HCl) and DIEA (270.36 mg, 2.09 mmol, 364.37 µL, 5 eq) in DMF (3 mL) was added prop-2-enoyl chloride (45.44 mg, 502.06 µmol, 40.94 µL, 1.2 eq) at 0 °C, then the mixture was stirred at 0 °C for 1 hr. LCMS showed the reaction was completed. The reaction mixture was concentrated in vacuum to give a residue. The residue was purified by prep-HPLC(column: Phenomenex luna C18250*50mm*10 µm; mobile phase: [water (TFA)-ACN]; B%: 25%-55%, 10 min) to afford (S)-6-ethyl-5- (isopropyl(methyl)amino)-3-((3-(2-(2-(N-methylacrylamido) propanamido)ethyl)phenyl)amino)pyrazine- 2-carboxamide (10.92 mg, 22.03 µmol, 5.27% yield, 100% purity) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.10 (br s, 1H), 8.10 - 7.84 (m, 1H), 7.77 - 7.51 (m, 2H), 7.50 - 7.39 (m, 2H), 7.20 (t, J = 7.8 Hz, 1H), 6.79 (d, J = 7.6 Hz, 1H), 6.71 (br dd, J = 10.4, 16.8 Hz, 1H), 6.15 - 6.01 (m, 1H), 5.70 - 5.57 (m, 1H), 4.99 (br d, J = 7.2 Hz, 1H), 4.25 (quin, J = 6.6 Hz, 1H), 3.35 - 3.19 (m, 2H), 2.92 - 2.80 (m, 5H), 2.77 - 2.65 (m, 5H), 1.28 - 1.14 (m, 12H). LC-MS (ES+, m/z): 496.3[(M+H)+]; Rt=2.752 min; HRMS (EI): m/z [M]+ found: 496.3052.
Example 132 (Compound 317) 3-((3-((S)-2-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2- enamido)propanamido)propyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: 3-((3-((S)-2-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00927] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (51.40 mg, 310.37 µmol, 1.5 eq, HCl) in DMF (2 mL) was added DIEA (267.42 mg, 2.07 mmol, 360.41 µL, 10 eq) and 6-ethyl-5-methyl-3-((3- ((S)-2-((S)-2-(methylamino) propanamido) propyl)phenyl)amino)pyrazine-2-carboxamide hydrochloride (90 mg, 206.91 µmol, 1 eq, HCl), and then BOP (137.27 mg, 310.37 µmol, 1.5 eq) was added to the mixture at 0 °C, then the mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The mixture was poured into water (30 mL), then extracted with ethyl acetate (20 mL*3). The combined organic phase was washed with saturated brine (20 mL*2), dried with anhydrous Na2SO4, filtered and concentrated in vacuum. The residue was purified by prep-HPLC (TFA condition: column: Phenomenex C1880*30mm*3um;mobile phase: [water(TFA)-ACN]; B%: 15%-45%, 8min) to afford the title compound 3-((3-((S)-2-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propyl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (10.48 mg, 20.24 µmol, 9.78% yield, 98.45% purity) as a yellow solid.1H NMR (400 MHz, MeOD-d4) δ = 7.69 - 7.61 (m, 1H), 7.53 - 7.45 (m, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.90 - 6.72 (m, 2H), 6.69 - 6.48 (m, 1H), 4.98 (q, J = 7.2 Hz, 1H), 4.28 - 4.13 (m, 1H), 4.00 - 3.83 (m, 2H), 2.96 (s, 2H), 2.92 - 2.86 (m, 6H), 2.83 - 2.72 (m, 5H), 2.54 (s, 3H), 1.38 - 1.25 (m, 6H), 1.19 (d, J = 6.7 Hz, 3H). 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 9.84 - 9.72 (m, 1H), 8.11 (br d, J = 8.5 Hz, 1H), 7.78 (br d, J = 8.2 Hz, 1H), 7.88 - 7.76 (m, 1H), 7.67 (br d, J = 8.0 Hz, 1H), 7.41 (s, 1H), 7.21 (br t, J = 7.8 Hz, 1H), 6.89 - 6.73 (m, 2H), 6.63 - 6.49 (m, 1H), 4.97 - 4.45 (m, 1H), 4.08 - 3.96 (m, 1H), 3.91 - 3.81 (m, 2H), 2.89 (s, 2H), 2.83 - 2.72 (m, 9H), 2.68 - 2.59 (m, 2H), 2.55 - 2.50 (m, 3H), 1.26 - 1.15 (m, 6H), 1.11 - 1.04 (m, 3H)(TFA, salt). LC-MS (ES+, m/z): 510.2[(M+H)+]; Rt=2.172 min. HRMS (EI): m/z [M]+ found:510.3190.
Example 133 (Compound 318) (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbutanamido) propanamido) ethyl) phenyl) amino)-6- ethyl-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide
Step 1: (S)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbutanamido) propanamido) ethyl) phenyl) amino)-6-ethyl-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide
[00928] To a solution of 4-(dimethylamino) butanoic acid (84.16 mg, 502.06 µmol, 2 eq) in DMF (2 mL) was added DIPEA (324.44 mg, 2.51 mmol, 10 eq) and (S)-6-ethyl-5-(isopropyl (methyl) amino)-3-((3-(2- (2-(methylamino) propanamido) ethyl) phenyl) amino) pyrazine-2-carboxamide (120 mg, 251.03 µmol, 1 eq, HCl) at 0 °C, and then BOP (166.54 mg, 376.55 µmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 hrs. LCMS showed the reaction was completed. The mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex Luna C1875*30mm*3um;mobile phase: [water (TFA)-ACN]; B%: 15%-45%, 8 min) to afford (S)-3-((3-(2-(2-(4-(dimethylamino)-N- methylbutanamido) propanamido) ethyl) phenyl) amino)-6-ethyl-5-(isopropyl (methyl) amino) pyrazine- 2-carboxamide (14.18 mg, 25.56 µmol, 10.18% yield, 100% purity) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.17 - 11.04 (m, 1H), 9.46 - 9.22 (m, 1H), 8.08 - 7.70 (m, 2H), 7.58 - 7.39 (m, 3H), 7.22 (t, J = 7.8 Hz, 1H), 6.86 - 6.73 (m, 1H), 4.99 - 4.93 (m, 1H), 4.29 - 4.22 (m, 1H), 3.37 - 3.22 (m, 2H), 3.11 - 2.97 (m, 2H), 2.87 (s, 3H), 2.83 - 2.58 (m, 13H), 2.43 - 2.32 (m, 2H), 1.90 - 1.74 (m, 2H), 1.30 - 1.16 (m, 12H)(TFA salt) ; LC-MS (ES+, m/z): 555.4[(M+H)+]; Rt=2.315 min; HRMS (EI): m/z [M]+ found: 555.3839
Example 134 (Compound 319) (S,E)-6-cyclopropyl-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-methylnicotinamide
Step 1: (S,E)-6-cyclopropyl-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-methylnicotinamide
[00929] To a solution of (E)-4-(dimethylamino)but-2-enoic acid(32.66 mg, 197.22 µmol, 1.5 eq, HCl) and DIPEA (169.93 mg, 1.31 mmol, 229.01 µL, 10 eq) in DMF (1 mL) was added (S)-6-cyclopropyl-5- methyl-2-((3-(2-(2-(methylamino)propanamido) ethyl)phenyl)amino)nicotinamide (52 mg, 131.48 µmol, 1 eq) at 0 °C, and then BOP (87.23 mg, 197.22 µmol, 1.5 eq) was added. The mixture was stirred at 0 °C for 2 hrs. LC-MS showed desired compound was detected. The reaction mixture was poured into H2O (10 mL), and then extracted with EA (10 mL*3). The combined organic layers were washed with saturated brine (10 mL*3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep-HPLC (TFA condition; column: Phenomenex Luna C18 75*30mm*3um; mobile phase: [water (TFA)-ACN]; B%: 10%-40%, 8 min) to afford the little compound(S, E)-6-cyclopropyl-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-methylnicotinamide (10.01 mg, 19.76 µmol, 15.03% yield,) as a yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (s, 1H), 9.78 - 9.64 (m, 1H), 8.07 (br d, J = 6.1 Hz, 1H), 7.94 - 7.88 (m, 2H), 7.47 - 7.42 (m, 3H), 7.20 - 7.14 (m, 1H), 6.85 - 6.71 (m, 2H), 6.63 - 6.47 (m, 1H), 5.01 - 4.53 (m, 1H), 3.91 - 3.82 (m, 2H), 3.34 - 3.27 (m, 2H), 2.92 - 2.86 (m, 2H), 2.79 - 2.74 (m, 6H), 2.72 - 2.64 (m, 3H), 2.31 (s, 3H), 2.20 - 2.13 (m, 1H), 1.29 - 1.18 (m, 3H), 1.07 - 0.98 (m, 4H)(TFA, salt). LC-MS (ES+, m/z): 507.3 [(M+H) +]; Rt=2.124 min. HRMS (EI): m/z [M]+ found:507.3059.
Example 135 (Compound 321) (R,E)-3-((3-(1-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)propan -2-yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 4:(R,E)-3-((3-(1-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido) propan-2- yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00930] To a solution of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (162.37 mg, 343.00 µmol, 50% purity, 1.5 eq, HCl) in DMF (0.5 mL) was added DIPEA (329.92 mg, 2.55 mmol, 444.63 µL, 10 eq), (R)-3-((3-(1-aminopropan-2-yl)phenyl) amino)-6-ethyl-5-methylpyrazine-2-carboxamide (80 mg, 228.66 µmol, 1 eq, HCl) and BOP (151.70 mg, 343.00 µmol, 1.5 eq). The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Waters Xbridge Prep OBD C18150*40mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 30%-70%, 8 min) to afford (R,E)-3-((3-(1-(2-(4-(dimethylamino)- N-methylbut-2-enamido)acetamido) propan-2-yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (11.16 mg, 22.33 µmol, 9.77% yield) as a yellow solid 1H NMR (400 MHz, DMSO-d6) δ = 11.11 - 10.98 (m, 1H), 8.20 - 8.09 (m, 1H), 8.09 - 7.81 (m, 2H), 7.64 - 7.56 (m, 1H), 7.54 - 7.48 (m, 1H), 7.28 - 7.20 (m, 1H), 6.89 - 6.81 (m, 1H), 6.64 - 6.24 (m, 2H), 3.99 - 3.88 (m, 2H), 3.28 - 3.18 (m, 2H), 3.04 - 3.00 (m, 1H), 2.99 - 2.96 (m, 1H), 2.94 - 2.84 (m, 2H), 2.81 - 2.70 (m, 4H), 2.53 - 2.51 (m, 3H), 2.17 - 2.06 (m, 6H), 1.26 - 1.17 (m, 6H). LC-MS (ES+, m/z): 496.3[(M+H)+]; Rt=0.967 min; HRMS (EI): m/z [M]+ found: 496.2995.
Example 136 (Compound 322) (S,E)-6-(dimethylamino)-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-ethylnicotinamide
Scheme 35 Step 1: (S,E)-6-(dimethylamino)-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-ethylnicotinamide
[00931] To a mixture of (E)-4-(dimethylamino)but-2-enoic acid (110.66 mg, 668.17 µmol, 1.5 eq, HCl) in DMF (4 mL) was added DIPEA (4.45 mmol, 775.87 µL, 10 eq) and (S)-6-(dimethylamino)-5-ethyl-2- ((3-(2-(2-(methylamino)propanamido) ethyl) phenyl)amino)nicotinamide (200 mg, 445.45 µmol, 1 eq, HCl), finally was added BOP (295.52 mg, 668.17 µmol, N/A purity, 1.5 eq) in one portion at 0 °C. The mixture was stirred at 0 °C for 2 hrs under N2. LCMS showed the reaction was completed. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC (TFA) : column: Phenomenex Luna 80*30mm*3um;mobile phase: [water(TFA)-ACN];B%: 5%-40%,8min to afford (S,E)- 6-(dimethylamino)-2-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)phenyl)amino)-5-ethylnicotinamide (13.15 mg, 25.07 µmol, 5.63% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ =11.40 (br s, 1H), 9.86 (br dd, J = 1.4, 3.4 Hz, 1H), 8.14 - 7.80 (m, 3H), 7.59 (s, 1H), 7.52 - 7.46 (m, 1H), 7.30 - 7.13 (m, 2H), 6.86 - 6.77 (m, 1H), 6.73 (d, J = 7.5 Hz, 1H), 6.63 - 6.46 (m, 1H), 5.03 - 4.51 (m, 1H), 3.91 - 3.79 (m, 2H), 3.33 - 3.24 (m, 2H), 2.96 - 2.94 (m, 6H), 2.91 - 2.88 (m, 2H), 2.79 - 2.66 (m, 9H), 2.58 - 2.54 (m, 2H), 1.30 - 1.17 (m, 6H)(TFA, salt). LC-MS (ES+, m/z): 524.3[(M+H)+]; Rt=1.951 min; HRMS (EI): m/z [M+H]+ found: 524.3328.
Example 137 (Compound 323) (S,E)-6-cyclopropyl-2-((5-(2-(2-(4-(dimethylamino)-N-methylbut-2 enamido) propanamido)ethyl)pyridin-3-yl)amino)-5-methylnicotinamide
Step 1: (S,E)-6-cyclopropyl-2-((5-(2-(2-(4-(dimethylamino)-N-methylbut-2- enamido)propanamido)ethyl)pyridin-3-yl)amino)-5-methylnicotinamide
[00932] To a solution of (S)-6-cyclopropyl-5-methyl-2-((5-(2-(2- (methylamino)propanamido)ethyl)pyridin-3-yl)amino)nicotinamide (122 mg, 281.79 µmol, 1 eq), (E)-4- (dimethylamino)but-2-enoic acid (70.00 mg, 422.69 µmol, 1.5 eq, HCl) in DMF (2 mL) was added DIPEA (364.19 mg, 2.82 mmol, 10 eq), and then BOP (186.95 mg, 422.69 µmol, 1.5 eq) was added at 0 °C. The mixture was stirred at 0 °C for 1 hr. LC-MS showed desired compound was detected. The reaction mixture was quenched with (H2O) 10 mL, and then extracted with EtOAc (10 mL*3). The combined organic layers were washed with saturated brine (10 mL*3), dried over anhydrous Na2SO4, filtered and concentrated under reduced pressure to give a residue. The residue was purified by prep- HPLC (neutral condition; column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 20%-50%, 8min). To afford the little compound (S,E)-6-cyclopropyl-2-((5-(2-(2- (4-(dimethylamino)-N-methylbut-2-enamido)propanamido)ethyl)pyridin-3-yl)amino)-5- methylnicotinamide (11.08 mg, 21.83 µmol, 7.75% yield) as a black brown solid.1H NMR (400 MHz, MeOD-d4) δ = 8.81 - 8.75 (m, 1H), 8.04 - 7.94 (m, 2H), 7.87 - 7.84 (m, 1H), 6.81 - 6.67 (m, 1H), 6.56 - 6.43 (m, 1H), 5.09 - 5.01 (m, 1H), 3.58 - 3.45 (m, 2H), 3.32 (s, 2H), 3.14 - 3.06 (m, 2H), 2.90 - 2.80 (m, 3H), 2.39 (s, 3H), 2.27 - 2.21 (m, 7H), 1.40 - 1.29 (m, 3H), 1.17 - 1.13 (m, 2H), 1.10 - 1.05 (m, 2H). 1H NMR (400 MHz, DMSO-d6) δ = 11.14 (s, 1H), 8.62 (d, J = 1.9 Hz, 1H), 8.15 - 7.88 (m, 5H), 7.90 - 7.86 (m, 1H), 6.65 - 6.37 (m, 2H), 5.01 - 4.93 (m, 1H), 3.40 - 3.32 (m, 2H), 3.32 (s, 2H), 3.04 - 2.92 (m, 2H), 2.76 - 2.63 (m, 3H), 2.32 (s, 3H), 2.19 (br s, 7H), 1.24 (br d, J = 6.4 Hz, 3H), 1.08 - 0.98 (m, 4H). LC-MS (ES+, m/z): 508.3[(M+H) +]; Rt=1.750 min. HRMS (EI): m/z [M]+ found:508.3040.
Example 138 (Compound 324) (S,E)-3-((3-(1-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)propan-2- yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: (S,E)-3-((3-(1-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)propan-2- yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00933] To a mixture of (E)-N-(4-(dimethylamino)but-2-enoyl)-N-methylglycine (51.51 mg, 257.25 µmol, 1.5 eq) in DMF (1 mL) was added DIPEA (221.64 mg, 1.71 mmol, 298.71 µL, 10 eq) and (S)-3- ((3-(1-aminopropan-2-yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide (60 mg, 171.50 µmol, 1 eq, HCl), finally added BOP (113.78 mg, 257.25 µmol, 1.5 eq) in one portion at 16 °C. The mixture was stirred at 16 °C for 2 hrs under N2. LCMS showed the reaction was completed. The residue was concentrated. The residue was purified by prep-HPLC (column: Waters Xbridge BEH C18 100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 25%-55%, 8 min) to give (S,E)-3-((3- (1-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)propan-2-yl)phenyl)amino)-6-ethyl-5- methylpyrazine-2-carboxamide (10.42 mg, 20.91 µmol, 12.19% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.05 (d, J = 5.0 Hz, 1H), 8.15 (br d, J = 1.9 Hz, 1H), 8.09 - 7.82 (m, 2H), 7.60 (br t, J = 8.3 Hz, 1H), 7.55 - 7.51 (m, 1H), 7.24 (t, J = 7.8 Hz, 1H), 6.85 (d, J = 7.6 Hz, 1H), 6.62 - 6.24 (m, 2H), 3.94 (d, J = 17.9 Hz, 2H), 3.28 - 3.18 (m, 2H), 3.02 (s, 1H), 2.99 - 2.95 (m, 1.5H), 2.94 - 2.84 (m, 2H), 2.81 - 2.70 (m, 3.5H), 2.51 (br s, 3H), 2.15 - 2.12 (m, 3H), 2.11 - 2.04 (m, 3H), 1.27 - 1.17 (m, 6H). 1H NMR (400 MHz, MeOD-d4)δ = 7.64 - 7.56 (m, 2H), 7.28 - 7.19 (m, 1H), 6.88 (br d, J = 7.5 Hz, 1H), 6.80 - 6.64 (m, 1H), 6.61 - 6.26 (m, 1H), 4.09 - 3.95 (m, 2H), 3.48 - 3.33 (m, 2H), 3.14 - 2.94 (m, 5H),
2.88 (s, 1H), 2.79 (q, J = 7.5 Hz, 2H), 2.53 (s, 3H), 2.28 - 2.18 (m, 6H), 1.32 - 1.26 (m, 6H). LC-MS (ES+, m/z): 496.1[(M+H)+]; Rt=2.710 min; HRMS (EI): m/z [M+H]+ found: 496.3041. Example 139 (Compound 326) 3-((3-((R)-1-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2-enamido)propanamido)propan-2- yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
Step 1: 3-((3-((R)-1-((S)-2-((E)-4-(dimethylamino)-N-methylbut-2-enamido) propanamido)propan-2- yl)phenyl)amino)-6-ethyl-5-methylpyrazine-2-carboxamide
[00934] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (57.11 mg, 344.86 µmol, 1.5 eq, HCl) in DMF (1 mL) was added DIPEA (297.14 mg, 2.30 mmol, 400.45 µL, 10 eq), 6-ethyl-5-methyl-3-((3-((R)- 1-((S)-2-(methylamino)propanamido)propan-2-yl)phenyl)amino)pyrazine-2-carboxamide (100 mg, 229.91 µmol, 1 eq, HCl), and then BOP (152.52 mg, 344.86 µmol, 1.5 eq) at 0 °C. The mixture was stirred at 0 °C for 2 hrs. LCMS indicated the reaction was complete. The reaction mixture was filtered to give a residue. The residue was purified by prep-HPLC column: Phenomenex luna C18100*40mm*3 µm; mobile phase: [water(TFA)-ACN];B%: 5%-50%,8min to afford 3-((3-((R)-1-((S)-2-((E)-4- (dimethylamino)-N-methylbut-2-enamido)propanamido)propan-2-yl)phenyl) amino)-6-ethyl-5- methylpyrazine-2-carboxamide (11.02 mg, 21.62 µmol, 9.41% yield) as a yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.11 - 10.95 (m, 1H), 9.83 - 9.59 (m, 1H), 8.24 - 8.07 (m, 1H), 8.02 - 7.81 (m, 2H), 7.65 - 7.56 (m, 1H), 7.51 (s, 1H), 7.27 - 7.18 (m, 1H), 6.85 - 6.74 (m, 2H), 6.62 - 6.43 (m, 1H), 5.00 - 4.50 (m, 1H), 3.91 - 3.77 (m, 2H), 3.28 - 3.15 (m, 2H), 2.98 - 2.86 (m, 3H), 2.78 - 2.72 (m, 8H), 2.66 - 2.61 (m, 1H), 2.53 - 2.51 (m, 3H), 1.26 - 1.17 (m, 9H). (TFA salt) LC-MS (ES+, m/z): 510.3[(M+H)+]; Rt=2.168 min; HRMS (EI): m/z [M]+ found: 510.3176.
Example 140 (Compound 327) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6- ethynyl-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide
Step 1: tert-butyl (2-((3-((5-bromo-3-carbamoyl-6-(isopropyl (methyl) amino) pyrazin-2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate
[00935] To a solution of 3-((3-(2-aminoethyl) phenyl) amino)-6-bromo-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide (1.1 g, 2.70 mmol, 1 eq), N-(tert-butoxycarbonyl)-N-methylglycine (1.02 g, 5.40
mmol, 2 eq), BOP (1.79 g, 4.05 mmol, 1.5 eq) in DMF (10 mL) was added DIPEA (5.24 g, 40.51 mmol, 7.06 mL, 15 eq). The mixture was stirred at 16 °C for 1 h. LCMS showed the reaction was completed. The mixture was poured into water (30 mL) and extracted with EtOAc (30 mL*2). The organic layers was washed with water (60 mL*2), saturated brine (60 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (Petroleum ether: Ethyl acetate=1:1) to give tert-butyl (2-((3-((5-bromo-3-carbamoyl-6-(isopropyl (methyl) amino) pyrazin-2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate (370 mg, 639.58 µmol, 65.13% yield) as yellow oil. LC-MS (ES+, m/z): 578.4 [(M+H)+]; Rt =0.813 min. Step 2: tert-butyl (2-((3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5-((triisopropylsilyl) ethynyl) pyrazin-2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate
[00936] To a solution of tert-butyl (2-((3-((5-bromo-3-carbamoyl-6-(isopropyl (methyl) amino) pyrazin- 2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate (300 mg, 518.58 µmol, 1 eq) and ethynyltriisopropylsilane (283.73 mg, 1.56 mmol, 349.04 µL, 3 eq) in THF (3 mL) was added TEA (262.38 mg, 2.59 mmol, 360.90 µL, 5 eq), Pd(PPh3)2Cl2 (36.40 mg, 51.86 µmol, 0.1 eq) and CuI (9.88 mg, 51.86 µmol, 0.1 eq) at 20 °C. The mixture was stirred at 20 °C for 3 h under N2. LCMS showed the reaction was completed. The residue was dissolved in DCM (10 mL), scavenger (Pd) was added and then stirred at 20 °C for 1 h, and then filtered. The mixture was poured into water (10 mL) and extracted with DCM (10 mL*2). The organic layers was washed with water (20 mL*2), saturated brine ( 20 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (Petroleum ether: Ethyl acetate=1:3) to give tert-butyl (2-((3-((3- carbamoyl-6-(isopropyl (methyl) amino)-5-((triisopropylsilyl) ethynyl) pyrazin-2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate (206 mg, 302.96 µmol, 58.42% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.45 - 11.40 (m, 1H), 7.91 (br s, 1H), 7.62 - 7.53 (m, 3H), 7.45 - 7.38 (m, 1H), 7.30 - 7.22 (m, 1H), 6.92 - 6.86 (m, 1H), 5.28 - 5.15 (m, 1H), 3.76 - 3.66 (m, 2H), 3.31 - 3.26 (m, 2H), 3.13 - 3.08 (m, 3H), 2.79 - 2.69 (m, 5H), 1.41 - 1.31 (m, 9H), 1.22 (d, J = 6.6 Hz, 6H), 1.15 - 1.09 (m, 21H);; LC-MS (ES+, m/z): 680.4 [(M+H)+]; Rt =1.250 min. Step 3: 5-(isopropyl (methyl) amino)-3-((3-(2-(2-(methylamino) acetamido) ethyl) phenyl) amino)-6- ((triisopropylsilyl) ethynyl) pyrazine-2-carboxamide
[00937] To a solution of tert-butyl (2-((3-((3-carbamoyl-6-(isopropyl (methyl) amino)-5- ((triisopropylsilyl) ethynyl) pyrazin-2-yl) amino) phenethyl) amino)-2-oxoethyl) (methyl) carbamate (200 mg, 294.13 µmol, 1 eq) in DCM (2 mL) was added TFA (1.54 g, 13.51 mmol, 1 mL, 45.92 eq), the mixture was stirred at 20 °C for 1 h. LCMS indicated the reaction was complete. The reaction mixture was concentrated under reduced pressure to give 5-(isopropyl (methyl) amino)-3-((3-(2-(2-(methylamino) acetamido) ethyl) phenyl) amino)-6-((triisopropylsilyl) ethynyl) pyrazine-2-carboxamide (200 mg, crude) as black brown oil. LC-MS (ES+, m/z): 580.6 [(M+H) +]; RT=0.913 min. Step 4: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-((triisopropylsilyl) ethynyl) pyrazine-2-carboxamide
[00938] To a solution of (E)-4-(dimethylamino) but-2-enoic acid (85.93 mg, 518.83 µmol, 1.5 eq, HCl) in DMF (3 mL) was added DIPEA (670.55 mg, 5.19 mmol, 903.70 µL, 15 eq) and 5-(isopropyl (methyl) amino)-3-((3-(2-(2-(methylamino) acetamido) ethyl) phenyl) amino)-6-((triisopropylsilyl) ethynyl) pyrazine-2-carboxamide (240 mg, 345.88 µmol, 1 eq, TFA), and then BOP (229.47 mg, 518.83 µmol, 1.5 eq) was added. The mixture was stirred at 20 °C for 1 hr. LCMS indicated the reaction was completed. The mixture was poured into water (10 mL) and extracted with EtOAc (10 mL*2). The organic layers was washed with water (20 mL*2), saturated brine ( 20 mL*2), dried over Na2SO4, filtered, concentrated under reduced pressure to give a residue. The crude product was purified by chromatography on silica gel (DCM: MeOH=10:1) to give (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-((triisopropylsilyl) ethynyl) pyrazine-2- carboxamide (76 mg, 109.99 µmol, 31.80% yield) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.46 - 11.40 (m, 1H), 8.17 - 7.89 (m, 1H), 7.73 - 7.53 (m, 3H), 7.49 - 7.40 (m, 1H), 7.30 - 7.21 (m, 1H), 6.94 - 6.84 (m, 1H), 6.67 - 6.47 (m, 2H), 5.29 - 5.14 (m, 1H), 4.02 - 3.90 (m, 2H), 3.12 - 3.00 (m, 6H), 2.86 - 2.69 (m, 6H), 2.24 - 2.10 (m, 6H), 1.25 - 1.08 (m, 27H); LC-MS (ES+, m/z): 691.4 [(M+H) +]; RT=0.947 min.
Step 5: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethynyl-5-(isopropyl (methyl) amino) pyrazine-2-carboxamide
[00939] To a solution of (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-5-(isopropyl (methyl) amino)-6-((triisopropylsilyl) ethynyl) pyrazine-2-carboxamide (76 mg, 109.99 µmol, 1 eq) in DMF (1.5 mL) was added CsF (66.83 mg, 439.95 µmol, 16.22 µL, 4 eq) at 16 °C, the mixture was stirred at 16 °C for 2 hrs. LCMS indicated the reaction was complete. The mixture was filtered to give a residue. The crude was purified by prep-HPLC column: Waters Xbridge Prep OBD C18150*40mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 30%-70%, 8 min) to afford (E)-3- ((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido) acetamido) ethyl) phenyl) amino)-6-ethynyl-5- (isopropyl (methyl) amino) pyrazine-2-carboxamide (10.36 mg, 19.18 µmol, 17.44% yield, 98.97% purity) as yellow solid.1H NMR (400 MHz, DMSO-d6) δ = 11.50 - 11.42 (m, 1H), 8.16 - 7.89 (m, 1H), 7.79 - 7.68 (m, 1H), 7.64 - 7.38 (m, 3H), 7.25 (t, J = 7.8 Hz, 1H), 6.93 - 6.83 (m, 1H), 6.67 - 6.48 (m, 2H), 5.08 - 4.94 (m, 1H), 4.46 (s, 1H), 4.01 - 3.91 (m, 2H), 3.31 - 3.26 (m, 2H), 3.09 - 2.93 (m, 7H), 2.81 (s, 1H), 2.75 - 2.68 (m, 2H), 2.18 - 2.07 (m, 6H), 1.23 (d, J = 6.6 Hz, 6H); 1H NMR (400 MHz, DMSO-d6) δ = 11.42 - 11.31 (m, 1H), 8.18 - 7.90 (m, 1H), 7.62 - 7.53 (m, 1H), 7.46 - 7.37 (m, 1H), 7.29 - 7.20 (m, 1H), 6.93 - 6.83 (m, 1H), 6.68 - 6.44 (m, 2H), 5.08 - 4.90 (m, 1H), 4.40 (s, 1H), 4.00 - 3.90 (m, 2H), 3.36 - 3.24 (m, 2H), 3.08 - 2.90 (m, 7H), 2.76 (br s, 1H), 2.74 - 2.67 (m, 2H), 2.17 - 2.03 (m, 6H), 1.21 (d, J = 6.6 Hz, 6H); LCMS (ES+, m/z): 535.3 [(M+H)+]; Rt= 2.167 min; HRMS (EI): m/z [M+H]+ found:535.3162. Example 141 (Compound 328) (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl)phenyl)amino)-5- (isopropyl(methyl)amino)-6-vinylpyrazine-2-carboxamide
Scheme 37
Step 2: tert-butyl (2-((3-((3-carbamoyl-6-(isopropyl(methyl)amino)-5-vinylpyrazin-2- yl)amino)phenethyl)amino)-2-oxoethyl)(methyl)carbamate
[00940] To a solution of tert-butyl (2-((3-((5-bromo-3-carbamoyl-6-(isopropyl(methyl)amino)pyrazin-2- yl)amino)phenethyl)amino)-2-oxoethyl)(methyl)carbamate (300 mg, 518.58 µmol, 1 eq) and TEA (157.43 mg, 1.56 mmol, 216.54 µL, 3 eq) in DMF (5 mL) was added 4,4,5,5-tetramethyl-2-vinyl-1,3,2- dioxaborolane (239.61 mg, 1.56 mmol, 263.88 µL, 3 eq), and then Pd(dppf)Cl2 (37.95 mg, 51.86 µmol, 0.1 eq) was added. The mixture was degassed and purged with N2 for 3 times, and then stirred at 80 °C for 10 hrs under N2 atmosphere. LCMS showed the reaction was completed. The residue was dissolved in EtOAc (10 mL), scavenger (Pd) was added and then stirred at 20 °C for 1 h, and then filtered. The mixture was poured into water (30 mL) and extracted with EtOAc (20 mL *2). The organic layers were combined, washed with water (10 mL *2), saturated brine (10 mL), dried (Na2SO4), filtered and concentrated to give crude product. The crude product was purified by prep-TLC (PE/EA =1 /2) to give tert-butyl (2-((3-((3- carbamoyl-6-(isopropyl(methyl) amino)-5-vinylpyrazin-2-yl)amino)phenethyl)amino)-2- oxoethyl)(methyl)carbamate (150 mg, 285.37 µmol, 55.03% yield) as yellow solid. LC-MS (ES+, m/z): 526.5 [(M+H)+]; Rt =0.821 min.
Step 3: 5-(isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino)acetamido)ethyl)phenyl)amino)-6- vinylpyrazine-2-carboxamide
[00941] To a solution of tert-butyl (2-((3-((3-carbamoyl-6-(isopropyl(methyl)amino)-5-vinylpyrazin-2- yl)amino)phenethyl)amino)-2-oxoethyl)(methyl)carbamate (70 mg, 133.17 µmol, 1 eq) and 2,6- lutidine(230.00 mg, 2.15 mmol, 250.00 µL, 16.12 eq) in DCM (1 mL) was added dropwise TMSI (257.25 mg, 1.29 mmol, 175.00 µL, 9.65 eq) at 0 °C. After addition, the resulting mixture was stirred at 16 °C for 2 hrs. LCMS showed the reaction was completed. The mixture was concentrated under reduced pressure to give 5-(isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino)acetamido)ethyl) phenyl)amino)-6- vinylpyrazine-2-carboxamide (80 mg, crude) as yellow solid. LC-MS (ES+, m/z): 426.5 [(M+H)+]; Rt =0.605 min. Step 4: (E)-3-((3-(2-(2-(4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl)phenyl)amino)- 5-(isopropyl(methyl)amino)-6-vinylpyrazine-2-carboxamide
[00942] To a solution of (E)-4-(dimethylamino)but-2-enoic acid (46.70 mg, 282.00 µmol, 1.5 eq, HCl) in DMF (1 mL) was added DIEA (242.98 mg, 1.88 mmol, 327.47 µL, 10 eq) and 5- (isopropyl(methyl)amino)-3-((3-(2-(2-(methylamino)acetamido) ethyl)phenyl) amino)-6-vinylpyrazine-2- carboxamide (80 mg, 188.00 µmol, 1 eq) , then BOP (124.72 mg, 282.00 µmol, 1.5 eq) was added. The mixture was stirred at 16 °C for 1 hr. LCMS showed the reaction was completed. After filter, the filtrate was purified by prep-HPLC (column: Waters Xbridge BEH C18100*30mm*10um;mobile phase: [water( NH4HCO3)-ACN]; B%: 30%-60%, 8 min) and further purified by SFC separation (column: ChiralPak IH, 250*30mm, 10um; mobile phase: [MeOH (0.1%IPAm)]; B%: 18%-18%, 12 min) to give (E)-3-((3-(2-(2- (4-(dimethylamino)-N-methylbut-2-enamido)acetamido)ethyl)phenyl)amino)-5- (isopropyl(methyl)amino)-6-vinylpyrazine-2-carboxamide (6.37 mg, 11.77 µmol, 6.26% yield) as yellow solid. 1H NMR (400 MHz, DMSO-d6) δ = 11.34 (d, J = 5.1 Hz, 1H), 8.18 - 7.89 (m, 2H), 7.57 (br d, J = 15.8 Hz, 2H), 7.51 - 7.43 (m, 1H), 7.23 (t, J = 7.8 Hz, 1H), 6.84 (d, J = 7.4 Hz, 1H), 6.68 (dd, J = 10.8, 17.1 Hz, 1H), 6.61 - 6.55 (m, 1H), 6.55 - 6.29 (m, 1H), 6.23 (dd, J = 2.1, 17.1 Hz, 1H), 5.32 - 5.25 (m, 1H), 4.31 - 4.19 (m, 1H), 3.95 (d, J = 19.4 Hz, 2H), 3.37 - 3.31 (m, 2H), 3.07 (br d, J = 3.8 Hz, 1H), 3.03 -
2.96 (m, 2H), 2.87 (s, 3H), 2.81 (s, 2H), 2.76 - 2.68 (m, 2H), 2.21 - 2.11 (m, 6H), 1.20 (d, J = 6.6 Hz, 6H); 1H NMR (400 MHz, DMSO-d6+D2O) δ = 11.14 (d, J = 8.1 Hz, 1H), 7.58 (s, 1H), 7.44 - 7.39 (m, 1H), 7.22 (t, J = 7.8 Hz, 1H), 6.83 (d, J = 7.2 Hz, 1H), 6.65 (dd, J = 10.8, 17.1 Hz, 1H), 6.59 - 6.22 (m, 2H), 6.13 (dd, J = 1.6, 17.1 Hz, 1H), 5.32 - 5.26 (m, 1H), 4.28 - 4.20 (m, 1H), 3.96 - 3.90 (m, 2H), 3.32 - 3.25 (m, 2H), 3.07 (br d, J = 4.6 Hz, 1H), 2.98 - 2.94 (m, 3H), 2.84 (s, 3H), 2.78 (s, 1H), 2.72 - 2.67 (m, 2H), 2.17 - 2.06 (m, 6H), 1.16 (d, J = 6.6 Hz, 6H). LCMS (ES+, m/z): 537.3 [(M+H)+]; Rt= 2.259 min; HRMS (EI): m/z [M+H]+ found:537.3313. Additional Exemplary Compounds [00943] The representative compounds prepared or can be prepared from readily available starting materials using the general methods and procedures described herein are depicted in Table 2A and 2B. Example B1 FLT3 in vitro Inhibitory Activity [00944] The proliferation inhibitory effect was investigated in human AML cell lines MOLM-13 (AddexBio: C0003003 )[REF: Pubmed: 9305600 ] and MV-4-11 (ATCC: CRL-9591)[REF PMID: 3496132], and CML cell line K-652 (ATCC: CRL-3343) [REF PMID: 163658]. Molm-13 is heterozygous for FLT3-ITD mutation, while MV4-11 is homozygous for FLT3-ITD [ PMID: 12529668]. K562 does not harbor any FLT3 mutations. Cells were maintained in RPMI-1640 medium (ThermoFisher catalog no. 61870036) supplemented with 10% of Heat Inactivated FBS (ThermoFisher catalog no.A31605) and 1% Pen-Strep (ThermoFisher catalog no. 10378016) and cultured at 37°C in a humidified incubator with 5% CO2. Cell lines were grown by adhering to culture flasks, and the cells were maintained in a range 70%- 80% confluency. [00945] ATP is present in all metabolically active cells and is considered as a marker for cell viability and proliferation. Metabolic cell activity was determined using the CellTiter-Glo kit (Promega catalog no. G7572), an ATP monitoring system based on the production of luminescence by the reaction of ATP with added UltraGlo® recombinant luciferase (Kawano et al., 2016, PLOS One, 8;11(7):e0158888), according to the supplier’s experimental recommendations. The assay was based on a 96 well plate format. [00946] Test compounds were dissolved at 10mM in DMSO (Sigma catalog no. D8418; purity ≥99.9%) and stored at -20°C. Eight concentrations of test compound were assessed in duplicate in an individual test occasion in parallel in the selected cell lines. Gilteratinib and FF-10101 were used as reference compounds and tested in duplicate at eight concentrations. 100% of proliferation is represented by the untreated cells (0.2% DMSO). [00947] On the day of the experiment (T0), cells were quantified with the cell viability analyser NucleoCounter (Chemometec NC-200) and diluted with fresh medium to obtain the cell density of about 10,000 cells per 200 µL medium. 200µL of cell suspension were added into wells in the 96 well plate.
[00948] After 2 hours from seeding cells, compounds were added using a D300e compound dispenser (Life Sciences Tecan D300) at desired concentrations with shaking between each compound dispensed. Cell plates containing 200µL/well suspension were incubated at 37°C in a humidified incubator with 5% CO2. [00949] On day T4, plates containing the samples were equilibrated at room temperature for approximately 15 min, and then 40µL/well of the Promega CellTiterGlo® reagent was added. Contents were mixed for 5 min on an orbital shaker to induce cell lysis, and then incubated at room temperature for an additional 10 min in the dark to stabilize the luminescent signal. Luminescence was read by using a GloMax GM300 plate reader (Promega) using the luminescence for 96 well plate standard protocol. [00950] Data was expressed as % of inhibition compared to the 0.2% DMSO negative control, and is calculated as follows: % inhibition =100-[(RLU sample) x 100/(RLU average controls*)], where * indicates the average for 0.2% DMSO. [00951] Results were analysed by GraphPad (Prism) and IC50 values were calculated by non-linear regression using four parameter-logistic equation. IC50 values measured on day T4 (4 days) are reported in the Table 2A below: ***** <1 nM, **** 1-10 nM, *** 10-100 nM, ** 100-500 nM, * >500 nM. [00952] Compounds of the disclosure provided the following IC50 (4 days) values: Table 2A: Representative compounds and their IC50 values
Table 2B: Representative compounds and their IC50 values
Example B2: Pharmaceutical Compositions [00953] The compositions described below are presented with a compound of Formula (I) for illustrative purposes. Example B2a: Parenteral Composition [00954] To prepare a parenteral pharmaceutical composition suitable for administration by injection, 100 mg of a water-soluble salt of a compound of Formula (I) is dissolved in DMSO and then mixed with 10 mL of 0.9% sterile saline. The mixture is incorporated into a dosage unit form suitable for administration by injection. Example B2b: Oral Composition [00955] To prepare a pharmaceutical composition for oral delivery, 100 mg of a compound of Formula (I) is mixed with 750 mg of starch. The mixture is incorporated into an oral dosage unit for, such as a hard gelatin capsule, which is suitable for oral administration. Example B2c: Sublingual (Hard Lozenge) Composition [00956] To prepare a pharmaceutical composition for buccal delivery, such as a hard lozenge, mix 100 mg of a compound of Formula (I) with 420 mg of powdered sugar mixed, with 1.6 mL of light corn syrup, 2.4 mL distilled water, and 0.42 mL mint extract. The mixture is gently blended and poured into a mold to form a lozenge suitable for buccal administration. Example B2d: Inhalation Composition [00957] To prepare a pharmaceutical composition for inhalation delivery, 20 mg of a compound of Formula (I) is mixed with 50 mg of anhydrous citric acid and 100 mL of 0.9% sodium chloride solution. The mixture is incorporated into an inhalation delivery unit, such as a nebulizer, which is suitable for inhalation administration. Example B2e: Rectal Gel Composition [00958] To prepare a pharmaceutical composition for rectal delivery, 100 mg of a compound of Formula (I) is mixed with 2.5 g of methylcelluose (1500 mPa), 100 mg of methylparapen, 5 g of glycerin and 100 mL of purified water. The resulting gel mixture is then incorporated into rectal delivery units, such as syringes, which are suitable for rectal administration. Example B2f: Topical Gel Composition [00959] To prepare a pharmaceutical topical gel composition, 100 mg of a compound of Formula (I) is mixed with 1.75 g of hydroxypropyl cellulose, 10 mL of propylene glycol, 10 mL of isopropyl myristate and 100 mL of purified alcohol USP. The resulting gel mixture is then incorporated into containers, such as tubes, which are suitable for topical administration. Example B2g: Ophthalmic Solution Composition [00960] To prepare a pharmaceutical ophthalmic solution composition, 100 mg of a compound of Formula (I) is mixed with 0.9 g of NaCl in 100 mL of purified water and filtered using a 0.2 micron filter.
The resulting isotonic solution is then incorporated into ophthalmic delivery units, such as eye drop containers, which are suitable for ophthalmic administration. [00961] It is understood that the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and scope of the appended claims. All publications, patents, and patent applications cited herein are hereby incorporated by reference in their entirety for all purposes. [00962] At least some of the chemical names of compounds provided herein as given and set forth in this application, may have been generated on an automated basis by use of a commercially available chemical naming software program, and have not been independently verified In the instance where the indicated chemical name and the depicted structure differ, the depicted structure will control. In the chemical structures where a chiral center exists in a structure but no specific stereochemistry is shown for the chiral center, both enantiomers associated with the chiral structure are encompassed by the structure.
Claims
W HAT IS CLAIMED IS: 1. A compound according to Formula (P-I):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: each A1, A2, A3, and A4 is independently –C(R7)=, or -N=; provided no more than two of A1, A2, A3, and A4 is N; X is a single bond, -O-, or -NR2a-; Y is absent, -C(R2eR2f), -O-, or -NR2g-; L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; L2 is a single bond, -C(O)-L3-NR2b-, -S(O)-L3-NR2b-, -S(O)2-L3-NR2b-; L3 is substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, substituted or unsubstituted alkynyl, substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; each R2a, R2b, R2c, R2d, R2e, R2f, and R2g, is independently H or C1-C4 alkyl; and wherein R2c and R2d may join together to form a 4-6 membered heterocycloalkyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide;
R5 is H, Cy, CN, halo, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino; Cy is substituted or unsubstituted cycloalkyl, or substituted or unsubstituted heterocycloalkyl; each R6a and R6b is independently H, halo, CN, or C1-6 alkyl; or R6a and R6b are joined together to form a bond; R6c is H, halo, CN, or C1-6 alkyl, wherein the C1-6 alkyl is unsubstituted or substituted with one or more groups selected from substituted or unsubstituted amino, and substituted or unsubstituted heterocycloalkyl having 1-2 heteroatoms independently selected from nitrogen, oxygen, and sulfur; and each R7 is independently H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, or substituted or unsubstituted heterocycloalkyl; wherein the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl- 3-[(1-oxo-2-propen-1-yl)amino]phenyl]amino]-2-pyrazinecarboxamide, or a stereoisomer or salt thereof.
2. The compound according to claim 1, wherein R5 is C1-6 alkyl wherein the C1-6 alkyl is unsubstituted or substituted with halo, CN, OH, or substituted or unsubstituted C1-6 alkoxy.
3. The compound according to claim 1, wherein R5 is C1-6 alkoxy wherein the C1-6 alkoxy is unsubstituted or substituted with halo, CN, OH, or substituted or unsubstituted C1-6 alkoxy.
4. The compound according to claim 1, wherein R5 is alkylamino wherein the alkylamino is unsubstituted or substituted with halo, CN, OH, or substituted or unsubstituted C1-6 alkoxy.
5. The compound according to claim 1, wherein R5 is dialkylamino wherein the dialkylamino is unsubstituted or substituted with halo, CN, OH, or substituted or unsubstituted C1-6 alkoxy.
6. The compound according to claim 1, wherein R5 is Cy, and Cy is substituted or unsubstituted cycloalkyl.
7. The compound according to claim 1, wherein R5 is Cy, and Cy is substituted or unsubstituted heterocycloalkyl.
8. The compound according to claim 1, wherein the compound is according to Formula (I):
or a stereoisomer thereof, or a pharmaceutically acceptable salt thereof, wherein: Y is -C(R2eR2f), -O-, or -NR2g-; 2 L1 is a single bond, substituted or unsubstituted C1-C4 alkylene, substituted or unsubstituted C2-C4 alkenylene; substituted or unsubstituted C2-C4 alkynylene; R1 is H, halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl; R4 is i) -C(O)-C(R6a)=C(R6b)(R6c), ii) -S(O)-C(R6a)=C(R6b)(R6c), iii) -S(O)2-C(R6a)=C(R6b)(R6c), or iv) substituted or unsubstituted epoxide; and wherein the compound is other than 6-ethyl-5-[(cis-4-hydroxy-4-methylcyclohexyl)amino]-3-[[4-methyl- 3-[(1-oxo-2-propen-1-yl)amino]phenyl]amino]-2-pyrazinecarboxamide, or a stereoisomer or salt thereof.
9. The compound according to any one of claims 1-8, wherein one of A1, A2, A3, and A4 is N.
10. The compound according to any one of claims 1-8, wherein each of A1, A2, and A3 is independently -C(R7)=; and A4 is –C(R7)= or N.
12. The compound according to any one of claims 1-11, wherein Cy is azetidinyl, azepinyl, pyrrolidinyl, piperidinyl, tetrahydrofuranyl, or tetrahydropyranyl.
13. The compound according to any one of claims 1-11, wherein Cy is tetrahydropyranyl.
14. The compound according to claim 1, wherein Y-R5 is H, halo, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted haloalkyl, substituted or unsubstituted C1-6 alkoxy, substituted or unsubstituted haloalkoxy, substituted or unsubstituted alkylamino, substituted or unsubstituted dialkylamino, heterocycloalkyl, substituted or unsubstituted phenyl, or substituted or unsubstituted heteroaryl.
16. The compound according to any one of claims 1-15, wherein R1 is halo, CN, substituted or unsubstituted C1-6 alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted alkenyl, or substituted or unsubstituted alkynyl.
22. The compound according to any one of claims 1-21, wherein L1 is substituted or unsubstituted C2-C4 alkylene.
23. The compound according to any one of claims 1-21, wherein L1 is -CH2-CH2-.
29. The compound according to any one of claims 1-28, wherein L3 is -CH2-, -C(Me)H-, or -CH2-CH2-, -CH2-CH2-CH2-.
30. The compound according to any one of claims 1-29, wherein R2b is H.
31. The compound according to any one of claims 1-29, wherein R2b is Me.
33. The compound according to claim 1, wherein R2b is H or Me.
35. The compound according to any one of claims 1-34, wherein R7 is H, Me, Et, Cl, F, or OMe.
36. The compound according to any one of claims 1-35, wherein R5 is cyclopropyl, Me, Et, N(Me)2, or N(i-Pr)(Me).
37. The compound according to claim 1, wherein the compound is according to Formula (XLIIIa), (XLIIIb), (XLIIIc) or (XLIIId):
45. The compound according to claim 1, wherein the compound is according to Formula (LXa), (LXb), (LXc), (LXd), (LXe) or (LXf):
47. The compound according to any one of claims 1-46, wherein R4 is -C(O)-C(R6a)=C(R6b)(R6c).
48. The compound according to any one of claims 1-46, wherein each of R6a, R6b, and R6c is H.
49. The compound according to any one of claims 1-46, wherein each of R6a and R6b is H; and R6c is alkyl substituted with amino, alkylamino or dialkylamino.
50. The compound according to any one of claims 1-46, wherein R6a and R6b form a bond; and R6c is H or substituted or unsubstituted alkyl.
51. The compound according to any one of claims 1-46, wherein R6a and R6b form a bond; and R6c is Me.
52. The compound according to any one of claims 1-46, wherein each of R6a and R6b is H; and R6c is -(CH2)q-heterocycloalkyl; and q is 1, 2, 3, or 4.
53. The compound according to any one of claims 1-46, wherein each of R6a and R6b is H; and R6c is -(CH2)q-heterocycloalkyl; and q is 1.
54. The compound according to any one of claims 1-46, wherein heterocycloalkyl is azetidin-1-yl, pyrrolidin-1-yl, piperidin-1-yl, or azepin-1-yl.
55. The compound according to any one of claims 1-46, wherein each of R6a and R6b is H or Me; and R6c is –CH2-azetidin-1-yl, –CH2-pyrrolidin-1-yl, or –CH2-piperidin-1-yl.
56. The compound according to claim 1, wherein the compound is selected from any one of the compounds listed in Table 2A and Table 2B, or a pharmaceutically acceptable stereoisomer, salt, or solvate thereof.
57. A pharmaceutical composition comprising a therapeutically effective amount of a compound of any one of Claims 1-56; or a pharmaceutically acceptable stereoisomer, salt, solvate, or prodrug thereof; and a pharmaceutically acceptable excipient.
58. The pharmaceutical composition of claim 57 that is formulated for a route of administration selected from oral administration, parenteral administration, buccal administration, nasal administration, topical administration, or rectal administration.
59. A method for treating a proliferative disease or condition comprising administering to a patient in need thereof a therapeutically effective amount of the pharmaceutical composition of claim 57 or 58.
60. A method for treating a proliferative disease or condition comprising administering to a patient in need thereof the pharmaceutical composition of claim 57 or 58.
61. A method for treating a cancer comprising administering to a patient in need thereof a therapeutically effective amount of the pharmaceutical composition of claim 57 or 58.
62. The method of claim 61, wherein the cancer is a hematological malignancy.
63. The method of claim 61, wherein the hematological malignancy is acute lymphocytic leukemia (ALL), acute myeloid leukemia (AML), chronic lymphocytic leukemia (CLL), chronic myeloid leukemia (CML), prolymphocytic leukemia (PLL), large granular lymphocytic (LGL), hairy cell leukemia (HCL), mast-cell leukemia (MCL) or myelodysplastic syndrome (MDS).
64. The method of claim 61, wherein the patient has a FLT3 mutation selected from N676K, F691L, D835H, D835V, D835Y, Y842C, and combinations thereof.
65. The use of a compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56, or a pharmaceutical composition of either of claims 57 or 58, in the manufacture of a medicament.
66. A compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56, or a pharmaceutical composition of either of claims 57 or 58, for use as a medicament.
67. A compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56, or a pharmaceutical composition of either of claims 57 or 58, for use in the treatment, prevention or prophylaxis of proliferative diseases.
68. A compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56, or a pharmaceutical composition of either of claims 57 or 58, for use in the treatment, prevention or prophylaxis of a hematological malignancy.
69. The use of a compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56 in the preparation of a medicament for the treatment, prevention or prophylaxis of proliferative diseases.
70. The use of a compound, or a metabolite, a solvate, a pharmaceutically acceptable stereoisomer, salt, or a prodrug thereof, according to any one of claims 1-56 in the preparation of a medicament for the treatment, prevention or prophylaxis of a hematological malignancy.
71. The compound according to any one of claims 1-56, the pharmaceutical composition according to claim 57 or 58, the method according to any one of claims 59-64, or the use according to any one of claims 65-70 , wherein the compound is an inhibitor of FLT3.
Priority Applications (4)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CA3229937A CA3229937A1 (en) | 2021-08-24 | 2022-08-19 | Pyrazine compounds as irreversible inhibitors of flt3 |
US18/148,311 US11945785B2 (en) | 2021-12-30 | 2022-12-29 | Pyrazine compounds as inhibitors of FLT3 |
TW111150672A TW202340177A (en) | 2021-12-30 | 2022-12-29 | Pyrazine compounds as inhibitors of flt3 |
PCT/US2022/054270 WO2023129667A1 (en) | 2021-12-30 | 2022-12-29 | Pyrazine compounds as inhibitors of flt3 |
Applications Claiming Priority (8)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US202163236569P | 2021-08-24 | 2021-08-24 | |
US63/236,569 | 2021-08-24 | ||
US202163295494P | 2021-12-30 | 2021-12-30 | |
US63/295,494 | 2021-12-30 | ||
US202263316939P | 2022-03-04 | 2022-03-04 | |
US63/316,939 | 2022-03-04 | ||
US202263364860P | 2022-05-17 | 2022-05-17 | |
US63/364,860 | 2022-05-17 |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US18/148,311 Continuation US11945785B2 (en) | 2021-12-30 | 2022-12-29 | Pyrazine compounds as inhibitors of FLT3 |
Publications (1)
Publication Number | Publication Date |
---|---|
WO2023027966A1 true WO2023027966A1 (en) | 2023-03-02 |
Family
ID=83228727
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US2022/040953 WO2023027966A1 (en) | 2021-08-24 | 2022-08-19 | Pyrazine compounds as irreversible inhibitors of flt3 |
Country Status (1)
Country | Link |
---|---|
WO (1) | WO2023027966A1 (en) |
Cited By (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2023225005A1 (en) * | 2022-05-17 | 2023-11-23 | Biomea Fusion, Inc. | Flt3 combination therapy for cancer and compositions therefor |
US11945785B2 (en) | 2021-12-30 | 2024-04-02 | Biomea Fusion, Inc. | Pyrazine compounds as inhibitors of FLT3 |
Citations (84)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US3598122A (en) | 1969-04-01 | 1971-08-10 | Alza Corp | Bandage for administering drugs |
US3598123A (en) | 1969-04-01 | 1971-08-10 | Alza Corp | Bandage for administering drugs |
US3710795A (en) | 1970-09-29 | 1973-01-16 | Alza Corp | Drug-delivery device with stretched, rate-controlling membrane |
US3731683A (en) | 1971-06-04 | 1973-05-08 | Alza Corp | Bandage for the controlled metering of topical drugs to the skin |
US3742951A (en) | 1971-08-09 | 1973-07-03 | Alza Corp | Bandage for controlled release of vasodilators |
US3814097A (en) | 1972-02-14 | 1974-06-04 | Ici Ltd | Dressing |
US3921636A (en) | 1973-01-15 | 1975-11-25 | Alza Corp | Novel drug delivery device |
US3972995A (en) | 1975-04-14 | 1976-08-03 | American Home Products Corporation | Dosage form |
US3993072A (en) | 1974-08-28 | 1976-11-23 | Alza Corporation | Microporous drug delivery device |
US3993073A (en) | 1969-04-01 | 1976-11-23 | Alza Corporation | Novel drug delivery device |
US3996934A (en) | 1971-08-09 | 1976-12-14 | Alza Corporation | Medical bandage |
US4031894A (en) | 1975-12-08 | 1977-06-28 | Alza Corporation | Bandage for transdermally administering scopolamine to prevent nausea |
US4060084A (en) | 1976-09-07 | 1977-11-29 | Alza Corporation | Method and therapeutic system for providing chemotherapy transdermally |
US4069307A (en) | 1970-10-01 | 1978-01-17 | Alza Corporation | Drug-delivery device comprising certain polymeric materials for controlled release of drug |
US4077407A (en) | 1975-11-24 | 1978-03-07 | Alza Corporation | Osmotic devices having composite walls |
US4151273A (en) | 1974-10-31 | 1979-04-24 | The Regents Of The University Of California | Increasing the absorption rate of insoluble drugs |
US4201211A (en) | 1977-07-12 | 1980-05-06 | Alza Corporation | Therapeutic system for administering clonidine transdermally |
US4229447A (en) | 1979-06-04 | 1980-10-21 | American Home Products Corporation | Intraoral methods of using benzodiazepines |
US4230105A (en) | 1978-11-13 | 1980-10-28 | Merck & Co., Inc. | Transdermal delivery of drugs |
US4292303A (en) | 1979-08-14 | 1981-09-29 | Key Pharmaceuticals, Inc. | Polymeric diffusion matrix containing clonidine |
US4292299A (en) | 1978-11-06 | 1981-09-29 | Teijin Limited | Slow-releasing medical preparation to be administered by adhering to a wet mucous surface |
US4327725A (en) | 1980-11-25 | 1982-05-04 | Alza Corporation | Osmotic device with hydrogel driving member |
US4343789A (en) | 1979-07-05 | 1982-08-10 | Yamanouchi Pharmaceutical Co., Ltd. | Sustained release pharmaceutical composition of solid medical material |
US4476116A (en) | 1982-12-10 | 1984-10-09 | Syntex (U.S.A.) Inc. | Polypeptides/chelating agent nasal compositions having enhanced peptide absorption |
US4596795A (en) | 1984-04-25 | 1986-06-24 | The United States Of America As Represented By The Secretary, Dept. Of Health & Human Services | Administration of sex hormones in the form of hydrophilic cyclodextrin derivatives |
US4624848A (en) | 1984-05-10 | 1986-11-25 | Ciba-Geigy Corporation | Active agent containing hydrogel devices wherein the active agent concentration profile contains a sigmoidal concentration gradient for improved constant release, their manufacture and use |
US4755386A (en) | 1986-01-22 | 1988-07-05 | Schering Corporation | Buccal formulation |
US4871549A (en) | 1985-07-19 | 1989-10-03 | Fujisawa Pharmaceutical Co., Ltd. | Time-controlled explosion systems and processes for preparing the same |
US4968509A (en) | 1987-07-27 | 1990-11-06 | Mcneilab, Inc. | Oral sustained release acetaminophen formulation and process |
US5011692A (en) | 1985-12-28 | 1991-04-30 | Sumitomo Pharmaceuticals Company, Limited | Sustained pulsewise release pharmaceutical preparation |
US5017381A (en) | 1990-05-02 | 1991-05-21 | Alza Corporation | Multi-unit pulsatile delivery system |
US5033252A (en) | 1987-12-23 | 1991-07-23 | Entravision, Inc. | Method of packaging and sterilizing a pharmaceutical product |
US5052558A (en) | 1987-12-23 | 1991-10-01 | Entravision, Inc. | Packaged pharmaceutical product |
US5116817A (en) | 1982-12-10 | 1992-05-26 | Syntex (U.S.A.) Inc. | LHRH preparations for intranasal administration |
US5229135A (en) | 1991-11-22 | 1993-07-20 | Prographarm Laboratories | Sustained release diltiazem formulation |
US5260069A (en) | 1992-11-27 | 1993-11-09 | Anda Sr Pharmaceuticals Inc. | Pulsatile particles drug delivery system |
US5260068A (en) | 1992-05-04 | 1993-11-09 | Anda Sr Pharmaceuticals Inc. | Multiparticulate pulsatile drug delivery system |
US5281420A (en) | 1992-05-19 | 1994-01-25 | The Procter & Gamble Company | Solid dispersion compositions of tebufelone |
US5323907A (en) | 1992-06-23 | 1994-06-28 | Multi-Comp, Inc. | Child resistant package assembly for dispensing pharmaceutical medications |
US5336168A (en) | 1987-05-28 | 1994-08-09 | Drug Delivery Systems Inc. | Pulsating transdermal drug delivery system |
US5340591A (en) | 1992-01-24 | 1994-08-23 | Fujisawa Pharmaceutical Co., Ltd. | Method of producing a solid dispersion of the sparingly water-soluble drug, nilvadipine |
US5456923A (en) | 1991-04-16 | 1995-10-10 | Nippon Shinyaku Company, Limited | Method of manufacturing solid dispersion |
US5461140A (en) | 1992-04-30 | 1995-10-24 | Pharmaceutical Delivery Systems | Bioerodible polymers for solid controlled release pharmaceutical compositions |
US5516527A (en) | 1989-01-12 | 1996-05-14 | Pfizer Inc. | Dispensing device powered by hydrogel |
US5567441A (en) | 1995-03-24 | 1996-10-22 | Andrx Pharmaceuticals Inc. | Diltiazem controlled release formulation |
US5622721A (en) | 1991-11-22 | 1997-04-22 | The Procter & Gamble Company | Dosage forms of risedronate |
US5665378A (en) | 1994-09-30 | 1997-09-09 | Davis; Roosevelt | Transdermal therapeutic formulation |
US5686105A (en) | 1993-10-19 | 1997-11-11 | The Procter & Gamble Company | Pharmaceutical dosage form with multiple enteric polymer coatings for colonic delivery |
US5700485A (en) | 1992-09-10 | 1997-12-23 | Children's Medical Center Corporation | Prolonged nerve blockade by the combination of local anesthetic and glucocorticoid |
US5700410A (en) | 1992-10-16 | 1997-12-23 | Nippon Shinyaku Co., Ltd. | Method of manufacturing wax matrices |
WO1998002901A1 (en) | 1996-07-11 | 1998-01-22 | Varian Associates, Inc. | Method for injection of externally produced ions into a quadrupole ion trap |
US5723269A (en) | 1992-07-24 | 1998-03-03 | Takeda Chemical Industries, Ltd. | Microparticle preparation and production thereof |
US5739136A (en) | 1989-10-17 | 1998-04-14 | Ellinwood, Jr.; Everett H. | Intraoral dosing method of administering medicaments |
US5837284A (en) | 1995-12-04 | 1998-11-17 | Mehta; Atul M. | Delivery of multiple doses of medications |
US5837280A (en) | 1990-11-28 | 1998-11-17 | Sano Corporation | Transdermal administration of azapirones |
US5840329A (en) | 1997-05-15 | 1998-11-24 | Bioadvances Llc | Pulsatile drug delivery system |
US5858401A (en) | 1996-01-22 | 1999-01-12 | Sidmak Laboratories, Inc. | Pharmaceutical composition for cyclosporines |
US5869090A (en) | 1998-01-20 | 1999-02-09 | Rosenbaum; Jerry | Transdermal delivery of dehydroepiandrosterone |
US5977175A (en) | 1995-05-17 | 1999-11-02 | Cedars-Sinai Medical Center | Methods and compositions for improving digestion and absorption in the small intestine |
US6083518A (en) | 1995-06-20 | 2000-07-04 | Bioglan Ab | Composition comprising an active agent dissolved in a glass-forming carrier and a process for the preparation thereof |
US6391452B1 (en) | 1997-07-18 | 2002-05-21 | Bayer Corporation | Compositions for nasal drug delivery, methods of making same, and methods of removing residual solvent from pharmaceutical preparations |
US6465014B1 (en) | 2001-03-21 | 2002-10-15 | Isp Investments Inc. | pH-dependent sustained release, drug-delivery composition |
US6667048B1 (en) | 1997-01-07 | 2003-12-23 | Sonus Pharmaceuticals, Inc. | Emulsion vehicle for poorly soluble drugs |
US20040013734A1 (en) | 1999-02-10 | 2004-01-22 | Pfizer Inc. | Pharmaceutical solid dispersions |
US6923983B2 (en) | 1996-02-19 | 2005-08-02 | Acrux Dds Pty Ltd | Transdermal delivery of hormones |
US6929801B2 (en) | 1996-02-19 | 2005-08-16 | Acrux Dds Pty Ltd | Transdermal delivery of antiparkinson agents |
US6932983B1 (en) | 1999-05-27 | 2005-08-23 | Acusphere, Inc. | Porous drug matrices and methods of manufacture thereof |
US6946144B1 (en) | 1998-07-08 | 2005-09-20 | Oryxe | Transdermal delivery system |
US6960563B2 (en) | 2001-08-31 | 2005-11-01 | Morton Grove Pharmaceuticals, Inc. | Spontaneous emulsions containing cyclosporine |
EP2428508A1 (en) * | 2009-05-08 | 2012-03-14 | Astellas Pharma Inc. | Diamino heterocyclic carboxamide compound |
WO2012053606A1 (en) * | 2010-10-22 | 2012-04-26 | アステラス製薬株式会社 | Arylaminoheterocyclic carboxamide compound |
WO2013142382A1 (en) | 2012-03-22 | 2013-09-26 | Genosco | Substituted pyridopyrimidine compounds and their use as flt3 inhibitors |
WO2013157540A1 (en) | 2012-04-17 | 2013-10-24 | 富士フイルム株式会社 | Nitrogen-containing heterocyclic compound or salt thereof |
WO2015056683A1 (en) | 2013-10-16 | 2015-04-23 | 富士フイルム株式会社 | Nitrogen-containing heterocyclic compound salt or crystal thereof, pharmaceutical composition, and flt3 inhibitor |
WO2016027904A1 (en) | 2014-08-22 | 2016-02-25 | 富士フイルム株式会社 | Pharmaceutical composition for treating flt3 mutation-positive cancer, flt3 mutant inhibitor, and use of said pharmaceutical composition and said inhibitor |
AR110273A1 (en) * | 2016-11-30 | 2019-03-13 | Pharmacyclics Llc | BRUTON TYPEOSIN CINASE INHIBITORS |
WO2020022600A1 (en) | 2018-07-25 | 2020-01-30 | Hanmi Pharm. Co., Ltd. | Pyrimidine compounds and pharmaceutical compositions for preventing or treating cancers including the same |
WO2020040467A1 (en) | 2018-08-23 | 2020-02-27 | 주식회사 오스코텍 | Crystal polymorph of 8-bromo-2-(1-methylpiperidin-4-ylamino)-4-(4-phenoxyphenylamino)pyrido[4,3-d]pyrimidin-5(6h)-one hydrochloride and method for preparing same |
WO2020075838A1 (en) | 2018-10-12 | 2020-04-16 | 富士フイルム株式会社 | Antitumor agent for acute myeloid leukemia |
WO2020159117A1 (en) | 2019-02-01 | 2020-08-06 | 주식회사 오스코텍 | Oral solid formulation containing pyridopyridine-based hydrochloride and preparation method therefor |
WO2020171646A1 (en) | 2019-02-22 | 2020-08-27 | 한미약품 주식회사 | Pharmaceutical composition comprising flt3 inhibitor and hypomethylating agent for treating acute myeloid leukemia |
WO2020171649A1 (en) | 2019-02-22 | 2020-08-27 | 한미약품 주식회사 | Pharmaceutical combination comprising flt3 inhibitor and iap antagonist for treatment of acute myeloid leukemia |
WO2020175629A1 (en) | 2019-02-28 | 2020-09-03 | 富士フイルム株式会社 | Combinational medication |
WO2020262974A1 (en) | 2019-06-27 | 2020-12-30 | 한미약품 주식회사 | Pharmaceutical composition for treating acute myeloid leukemia, containing flt3 inhibitor and chemotherapeutic agents |
-
2022
- 2022-08-19 WO PCT/US2022/040953 patent/WO2023027966A1/en active Application Filing
Patent Citations (91)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US3598123A (en) | 1969-04-01 | 1971-08-10 | Alza Corp | Bandage for administering drugs |
US3598122A (en) | 1969-04-01 | 1971-08-10 | Alza Corp | Bandage for administering drugs |
US3598122B1 (en) | 1969-04-01 | 1982-11-23 | ||
US3993073A (en) | 1969-04-01 | 1976-11-23 | Alza Corporation | Novel drug delivery device |
US3710795A (en) | 1970-09-29 | 1973-01-16 | Alza Corp | Drug-delivery device with stretched, rate-controlling membrane |
US4069307A (en) | 1970-10-01 | 1978-01-17 | Alza Corporation | Drug-delivery device comprising certain polymeric materials for controlled release of drug |
US3731683A (en) | 1971-06-04 | 1973-05-08 | Alza Corp | Bandage for the controlled metering of topical drugs to the skin |
US3996934A (en) | 1971-08-09 | 1976-12-14 | Alza Corporation | Medical bandage |
US3742951A (en) | 1971-08-09 | 1973-07-03 | Alza Corp | Bandage for controlled release of vasodilators |
US3742951B1 (en) | 1971-08-09 | 1982-11-23 | ||
US3814097A (en) | 1972-02-14 | 1974-06-04 | Ici Ltd | Dressing |
US3921636A (en) | 1973-01-15 | 1975-11-25 | Alza Corp | Novel drug delivery device |
US3993072A (en) | 1974-08-28 | 1976-11-23 | Alza Corporation | Microporous drug delivery device |
US4151273A (en) | 1974-10-31 | 1979-04-24 | The Regents Of The University Of California | Increasing the absorption rate of insoluble drugs |
US3972995A (en) | 1975-04-14 | 1976-08-03 | American Home Products Corporation | Dosage form |
US4077407A (en) | 1975-11-24 | 1978-03-07 | Alza Corporation | Osmotic devices having composite walls |
US4031894A (en) | 1975-12-08 | 1977-06-28 | Alza Corporation | Bandage for transdermally administering scopolamine to prevent nausea |
US4060084A (en) | 1976-09-07 | 1977-11-29 | Alza Corporation | Method and therapeutic system for providing chemotherapy transdermally |
US4201211A (en) | 1977-07-12 | 1980-05-06 | Alza Corporation | Therapeutic system for administering clonidine transdermally |
US4292299A (en) | 1978-11-06 | 1981-09-29 | Teijin Limited | Slow-releasing medical preparation to be administered by adhering to a wet mucous surface |
US4230105A (en) | 1978-11-13 | 1980-10-28 | Merck & Co., Inc. | Transdermal delivery of drugs |
US4229447A (en) | 1979-06-04 | 1980-10-21 | American Home Products Corporation | Intraoral methods of using benzodiazepines |
US4343789A (en) | 1979-07-05 | 1982-08-10 | Yamanouchi Pharmaceutical Co., Ltd. | Sustained release pharmaceutical composition of solid medical material |
US4292303A (en) | 1979-08-14 | 1981-09-29 | Key Pharmaceuticals, Inc. | Polymeric diffusion matrix containing clonidine |
US4327725A (en) | 1980-11-25 | 1982-05-04 | Alza Corporation | Osmotic device with hydrogel driving member |
US5116817A (en) | 1982-12-10 | 1992-05-26 | Syntex (U.S.A.) Inc. | LHRH preparations for intranasal administration |
US4476116A (en) | 1982-12-10 | 1984-10-09 | Syntex (U.S.A.) Inc. | Polypeptides/chelating agent nasal compositions having enhanced peptide absorption |
US4596795A (en) | 1984-04-25 | 1986-06-24 | The United States Of America As Represented By The Secretary, Dept. Of Health & Human Services | Administration of sex hormones in the form of hydrophilic cyclodextrin derivatives |
US4624848A (en) | 1984-05-10 | 1986-11-25 | Ciba-Geigy Corporation | Active agent containing hydrogel devices wherein the active agent concentration profile contains a sigmoidal concentration gradient for improved constant release, their manufacture and use |
US4871549A (en) | 1985-07-19 | 1989-10-03 | Fujisawa Pharmaceutical Co., Ltd. | Time-controlled explosion systems and processes for preparing the same |
US5011692A (en) | 1985-12-28 | 1991-04-30 | Sumitomo Pharmaceuticals Company, Limited | Sustained pulsewise release pharmaceutical preparation |
US4755386A (en) | 1986-01-22 | 1988-07-05 | Schering Corporation | Buccal formulation |
US5336168A (en) | 1987-05-28 | 1994-08-09 | Drug Delivery Systems Inc. | Pulsating transdermal drug delivery system |
US4968509A (en) | 1987-07-27 | 1990-11-06 | Mcneilab, Inc. | Oral sustained release acetaminophen formulation and process |
US5033252A (en) | 1987-12-23 | 1991-07-23 | Entravision, Inc. | Method of packaging and sterilizing a pharmaceutical product |
US5052558A (en) | 1987-12-23 | 1991-10-01 | Entravision, Inc. | Packaged pharmaceutical product |
US5516527A (en) | 1989-01-12 | 1996-05-14 | Pfizer Inc. | Dispensing device powered by hydrogel |
US5739136A (en) | 1989-10-17 | 1998-04-14 | Ellinwood, Jr.; Everett H. | Intraoral dosing method of administering medicaments |
US5017381A (en) | 1990-05-02 | 1991-05-21 | Alza Corporation | Multi-unit pulsatile delivery system |
US5837280A (en) | 1990-11-28 | 1998-11-17 | Sano Corporation | Transdermal administration of azapirones |
US5456923A (en) | 1991-04-16 | 1995-10-10 | Nippon Shinyaku Company, Limited | Method of manufacturing solid dispersion |
US5229135A (en) | 1991-11-22 | 1993-07-20 | Prographarm Laboratories | Sustained release diltiazem formulation |
US5622721A (en) | 1991-11-22 | 1997-04-22 | The Procter & Gamble Company | Dosage forms of risedronate |
US5340591A (en) | 1992-01-24 | 1994-08-23 | Fujisawa Pharmaceutical Co., Ltd. | Method of producing a solid dispersion of the sparingly water-soluble drug, nilvadipine |
US5461140A (en) | 1992-04-30 | 1995-10-24 | Pharmaceutical Delivery Systems | Bioerodible polymers for solid controlled release pharmaceutical compositions |
US5508040A (en) | 1992-05-04 | 1996-04-16 | Andrx Pharmaceuticals, Inc. | Multiparticulate pulsatile drug delivery system |
US5260068A (en) | 1992-05-04 | 1993-11-09 | Anda Sr Pharmaceuticals Inc. | Multiparticulate pulsatile drug delivery system |
US5281420A (en) | 1992-05-19 | 1994-01-25 | The Procter & Gamble Company | Solid dispersion compositions of tebufelone |
US5323907A (en) | 1992-06-23 | 1994-06-28 | Multi-Comp, Inc. | Child resistant package assembly for dispensing pharmaceutical medications |
US5723269A (en) | 1992-07-24 | 1998-03-03 | Takeda Chemical Industries, Ltd. | Microparticle preparation and production thereof |
US5700485A (en) | 1992-09-10 | 1997-12-23 | Children's Medical Center Corporation | Prolonged nerve blockade by the combination of local anesthetic and glucocorticoid |
US5700410A (en) | 1992-10-16 | 1997-12-23 | Nippon Shinyaku Co., Ltd. | Method of manufacturing wax matrices |
US5260069A (en) | 1992-11-27 | 1993-11-09 | Anda Sr Pharmaceuticals Inc. | Pulsatile particles drug delivery system |
US5686105A (en) | 1993-10-19 | 1997-11-11 | The Procter & Gamble Company | Pharmaceutical dosage form with multiple enteric polymer coatings for colonic delivery |
US5665378A (en) | 1994-09-30 | 1997-09-09 | Davis; Roosevelt | Transdermal therapeutic formulation |
US5567441A (en) | 1995-03-24 | 1996-10-22 | Andrx Pharmaceuticals Inc. | Diltiazem controlled release formulation |
US5977175A (en) | 1995-05-17 | 1999-11-02 | Cedars-Sinai Medical Center | Methods and compositions for improving digestion and absorption in the small intestine |
US6083518A (en) | 1995-06-20 | 2000-07-04 | Bioglan Ab | Composition comprising an active agent dissolved in a glass-forming carrier and a process for the preparation thereof |
US5837284A (en) | 1995-12-04 | 1998-11-17 | Mehta; Atul M. | Delivery of multiple doses of medications |
US5858401A (en) | 1996-01-22 | 1999-01-12 | Sidmak Laboratories, Inc. | Pharmaceutical composition for cyclosporines |
US6923983B2 (en) | 1996-02-19 | 2005-08-02 | Acrux Dds Pty Ltd | Transdermal delivery of hormones |
US6929801B2 (en) | 1996-02-19 | 2005-08-16 | Acrux Dds Pty Ltd | Transdermal delivery of antiparkinson agents |
WO1998002901A1 (en) | 1996-07-11 | 1998-01-22 | Varian Associates, Inc. | Method for injection of externally produced ions into a quadrupole ion trap |
US6667048B1 (en) | 1997-01-07 | 2003-12-23 | Sonus Pharmaceuticals, Inc. | Emulsion vehicle for poorly soluble drugs |
US5840329A (en) | 1997-05-15 | 1998-11-24 | Bioadvances Llc | Pulsatile drug delivery system |
US6391452B1 (en) | 1997-07-18 | 2002-05-21 | Bayer Corporation | Compositions for nasal drug delivery, methods of making same, and methods of removing residual solvent from pharmaceutical preparations |
US5869090A (en) | 1998-01-20 | 1999-02-09 | Rosenbaum; Jerry | Transdermal delivery of dehydroepiandrosterone |
US6946144B1 (en) | 1998-07-08 | 2005-09-20 | Oryxe | Transdermal delivery system |
US20040013734A1 (en) | 1999-02-10 | 2004-01-22 | Pfizer Inc. | Pharmaceutical solid dispersions |
US6932983B1 (en) | 1999-05-27 | 2005-08-23 | Acusphere, Inc. | Porous drug matrices and methods of manufacture thereof |
US6465014B1 (en) | 2001-03-21 | 2002-10-15 | Isp Investments Inc. | pH-dependent sustained release, drug-delivery composition |
US6960563B2 (en) | 2001-08-31 | 2005-11-01 | Morton Grove Pharmaceuticals, Inc. | Spontaneous emulsions containing cyclosporine |
EP2428508A1 (en) * | 2009-05-08 | 2012-03-14 | Astellas Pharma Inc. | Diamino heterocyclic carboxamide compound |
WO2012053606A1 (en) * | 2010-10-22 | 2012-04-26 | アステラス製薬株式会社 | Arylaminoheterocyclic carboxamide compound |
US8877763B2 (en) | 2012-03-22 | 2014-11-04 | Genosco | Substituted pyridopyrimidine compounds and their use as FLT3 inhibitors |
WO2013142382A1 (en) | 2012-03-22 | 2013-09-26 | Genosco | Substituted pyridopyrimidine compounds and their use as flt3 inhibitors |
WO2013157540A1 (en) | 2012-04-17 | 2013-10-24 | 富士フイルム株式会社 | Nitrogen-containing heterocyclic compound or salt thereof |
US9145415B2 (en) | 2012-04-17 | 2015-09-29 | Fujifilm Corporation | Nitrogen-containing heterocyclic compound or salt thereof |
WO2015056683A1 (en) | 2013-10-16 | 2015-04-23 | 富士フイルム株式会社 | Nitrogen-containing heterocyclic compound salt or crystal thereof, pharmaceutical composition, and flt3 inhibitor |
US9701644B2 (en) | 2013-10-16 | 2017-07-11 | Fujifilm Corporation | Salt of nitrogen-containing heterocyclic compound or crystal thereof, pharmaceutical composition, and FLT3 inhibitor |
WO2016027904A1 (en) | 2014-08-22 | 2016-02-25 | 富士フイルム株式会社 | Pharmaceutical composition for treating flt3 mutation-positive cancer, flt3 mutant inhibitor, and use of said pharmaceutical composition and said inhibitor |
US9987278B2 (en) | 2014-08-22 | 2018-06-05 | Fujifilm Corporation | Pharmaceutical composition for treating FLT3 mutation-positive cancer, mutant FLT3 inhibitor and uses thereof |
AR110273A1 (en) * | 2016-11-30 | 2019-03-13 | Pharmacyclics Llc | BRUTON TYPEOSIN CINASE INHIBITORS |
WO2020022600A1 (en) | 2018-07-25 | 2020-01-30 | Hanmi Pharm. Co., Ltd. | Pyrimidine compounds and pharmaceutical compositions for preventing or treating cancers including the same |
WO2020040467A1 (en) | 2018-08-23 | 2020-02-27 | 주식회사 오스코텍 | Crystal polymorph of 8-bromo-2-(1-methylpiperidin-4-ylamino)-4-(4-phenoxyphenylamino)pyrido[4,3-d]pyrimidin-5(6h)-one hydrochloride and method for preparing same |
WO2020075838A1 (en) | 2018-10-12 | 2020-04-16 | 富士フイルム株式会社 | Antitumor agent for acute myeloid leukemia |
WO2020159117A1 (en) | 2019-02-01 | 2020-08-06 | 주식회사 오스코텍 | Oral solid formulation containing pyridopyridine-based hydrochloride and preparation method therefor |
WO2020171646A1 (en) | 2019-02-22 | 2020-08-27 | 한미약품 주식회사 | Pharmaceutical composition comprising flt3 inhibitor and hypomethylating agent for treating acute myeloid leukemia |
WO2020171649A1 (en) | 2019-02-22 | 2020-08-27 | 한미약품 주식회사 | Pharmaceutical combination comprising flt3 inhibitor and iap antagonist for treatment of acute myeloid leukemia |
WO2020175629A1 (en) | 2019-02-28 | 2020-09-03 | 富士フイルム株式会社 | Combinational medication |
WO2020262974A1 (en) | 2019-06-27 | 2020-12-30 | 한미약품 주식회사 | Pharmaceutical composition for treating acute myeloid leukemia, containing flt3 inhibitor and chemotherapeutic agents |
Non-Patent Citations (32)
Title |
---|
"Fieser and Fieser's Reagents for Organic Synthesis", vol. 1-40, 1991, JOHN WILEY AND SONS |
"Harrison's Principles of Internal Medicine", 2004, THE MCGRAW-HILL COMPANIES, INC |
"Larock's Comprehensive Organic Transformations", vol. 1-5, 1989, ELSEVIER SCIENCE PUBLISHERS |
ANSEL, H. C. ET AL.: "Pharmaceutical Dosage Forms and Drug Delivery Systems", 1995, LIPPINCOTT WILLIAMS & WILKINS |
ARNOLD ET AL., BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, vol. 10, 2000, pages 2167 - 2170 |
BURCHAT ET AL., BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, vol. 12, 2002, pages 1687 - 1690 |
CORTES ET AL., LANCET ONCOL., vol. 20, 2019, pages 984 |
DAVER ET AL., BLOOD, vol. 134, 2019, pages 1331 |
DEY ET AL., CYTOJOURNAL, vol. 3, no. 24, 2006 |
EDWARD B. ROCHE: "Bioreversible Carriers in Drug Design", 1987, AMERICAN PHARMACEUTICAL ASSOCIATION AND PERGAMON PRESS |
FEDORAK ET AL., AM. J. PHYSIOL., vol. 269, 1995, pages G210 - 218 |
HEIDEL ET AL., BLOOD, vol. 107, no. 1, 2006, pages 293 - 300 |
HOCHHAUS ET AL., BIOMED. CHROM., vol. 6, 1992, pages 283 - 286 |
HOOVER, JOHN E.: "Remington's Pharmaceutical Sciences", 2000, MACK PUBLISHING CO. |
J. LARSEN ET AL., INT. J. PHARMACEUTICS, vol. 47, 1988, pages 103 |
J. LARSENH. BUNDGAARD, INT. J. PHARMACEUTICS, vol. 37, 1987, pages 87 |
KENNEDY ET AL., FRONT. ONCOL., vol. 10, 2020, pages 612880 |
KIYOI ET AL., CANCER SCIENCE, vol. 111, 2020, pages 312 |
LACHMAN ET AL., THE THEORY AND PRACTICE OF INDUSTRIAL PHARMACY, 1986 |
LIBERMAN ET AL.: "Pharmaceutical Dosage Forms", vol. 1, 1990, MARCEL DECKER, pages: 209 - 214 |
MCLEOD ET AL., GASTROENTEROL, vol. 106, 1994, pages 405 - 413 |
PAPAEMMANUIL ET AL., N ENGL J MED., vol. 374, 2016, pages 2209 |
REMINGTON: "The Science and Practice of Pharmacy", 1995, MACK PUBLISHING COMPANY |
REMINGTON: "THE SCIENCE AND PRACTICE OF PHARMACY", 2005 |
S. XU ET AL., ANGEWANDTE CHEMIE INTERNATIONAL ED., vol. 57, no. 6, 2017, pages 1601 - 1605 |
SAULNIER ET AL., BIOORGANIC AND MEDICINAL CHEMISTRY LETTERS, vol. 4, 1985, pages 388 - 392 |
SINGH ET AL., ENCYCLOPEDIA OF PHARMACEUTICAL TECHNOLOGY, 2002, pages 754 - 757 |
SINKULA ET AL., J. PHARM. SCI., vol. 64, 1975, pages 181 - 210 |
SMITH ET AL., NATURE, vol. 485, no. 7397, 2012, pages 260 - 263 |
T. HIGUCHIV. STELLA, PRO-DRUGS AS NOVEL DELIVERY SYSTEMS, vol. 14 |
WANG ET AL., J. MED. CHEM., vol. 64, no. 8, 2021, pages 4870 - 4890 |
YAMAURA ET AL., BLOOD, vol. 131, 2018, pages 426 |
Cited By (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US11945785B2 (en) | 2021-12-30 | 2024-04-02 | Biomea Fusion, Inc. | Pyrazine compounds as inhibitors of FLT3 |
WO2023225005A1 (en) * | 2022-05-17 | 2023-11-23 | Biomea Fusion, Inc. | Flt3 combination therapy for cancer and compositions therefor |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
US11702421B2 (en) | Substituted pyridines as irreversible inhibitors of menin-MLL interaction | |
KR101841325B1 (en) | Purinone compounds as kinase inhibitors | |
US11845753B2 (en) | Inhibitors of menin-mll interaction | |
CA2932609A1 (en) | Inhibitors of bruton's tyrosine kinase | |
EP2920180A1 (en) | Pyrrolopyrimidine compounds as kinase inhibitors | |
AU2012275275A1 (en) | Methods and compositions for inhibition of bone resorption | |
WO2007087068A2 (en) | Inhibitors of tyrosine kinases and uses thereof | |
WO2023027966A1 (en) | Pyrazine compounds as irreversible inhibitors of flt3 | |
EP4263542A1 (en) | Fused pyrimidine compounds as inhibitors of menin-mll interaction | |
WO2023039240A1 (en) | IRREVERSIBLE INHIBITORS OF KRas | |
US11945785B2 (en) | Pyrazine compounds as inhibitors of FLT3 | |
WO2023086341A1 (en) | Inhibitors of kras | |
CA3229937A1 (en) | Pyrazine compounds as irreversible inhibitors of flt3 | |
WO2023235618A1 (en) | Fused pyrimidine compounds as inhibitors of menin | |
US20240124467A1 (en) | Fused pyrimidine compounds as inhibitors of menin-mll interaction |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
121 | Ep: the epo has been informed by wipo that ep was designated in this application |
Ref document number: 22765696 Country of ref document: EP Kind code of ref document: A1 |
|
WWE | Wipo information: entry into national phase |
Ref document number: 3229937 Country of ref document: CA |
|
WWE | Wipo information: entry into national phase |
Ref document number: 2022765696 Country of ref document: EP |
|
ENP | Entry into the national phase |
Ref document number: 2022765696 Country of ref document: EP Effective date: 20240325 |