WO2021222595A2 - Multispecific antibodies targeting cd38 and epcam and uses thereof - Google Patents

Multispecific antibodies targeting cd38 and epcam and uses thereof Download PDF

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WO2021222595A2
WO2021222595A2 PCT/US2021/029931 US2021029931W WO2021222595A2 WO 2021222595 A2 WO2021222595 A2 WO 2021222595A2 US 2021029931 W US2021029931 W US 2021029931W WO 2021222595 A2 WO2021222595 A2 WO 2021222595A2
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seq
amino acid
multispecific antibody
binding domain
antibody
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PCT/US2021/029931
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French (fr)
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WO2021222595A3 (en
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Xiaocheng Chen
Leonard Post
Lei Shi
Qi FEI
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Virtuoso Binco, Inc.
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Publication of WO2021222595A2 publication Critical patent/WO2021222595A2/en
Publication of WO2021222595A3 publication Critical patent/WO2021222595A3/en

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  • the present disclosure provides multispecific antibodies (such as, bispecific antibodies) comprising a CD38-binding domain and an EpCAM binding domain.
  • multispecific antibodies that comprises a CD38 binding domain and an EpCAM binding domain.
  • said multispecific antibody is bispecific, trispecific, or tetraspecific. In some embodiments, said multispecific antibody is bispecific. In some embodiments, said multispecific antibody is bivalent, trivalent, or tetravalent. In some embodiments, said multispecific antibody is bivalent.
  • said CD38 binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds CD38.
  • said antibody, or functional fragment or functional variant thereof comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
  • said variable domain of an IgG heavy chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
  • variable domain of an IgG heavy chain comprises a variable domain of an IgGl heavy chain
  • variable domain of an IgG light chain comprises a variable domain of an IgGl light chain
  • said antibody, or functional fragment or functional variant thereof comprises a scFv or a Fab.
  • said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC- CDR3, wherein the HC-CDR1, the HC-CDR2, and the HC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: HC-CDR1: SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; HC-CDR1: SEQ ID NO: 109; HC-CDR2: SEQ ID NO: 110; HC-CDR3: SEQ ID NO: 111; and HC-CDR1: SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3: SEQ ID NO: 108.
  • CDRs complementarity determining regions
  • said variable domain of an IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions LC (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 166; LC-CDR1 : SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; LC-CDR3: SEQ ID NO: 169; and LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 171.
  • CDRs complementarity determining regions
  • variable domain of an IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, and said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises CDRs: HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC- CDR3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences are as set forth in any one of the following sets of sequences: HC-CDR1: SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; and LC-CDR3
  • variable domain of an IgG heavy chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211-233.
  • said variable domain of an IgG light chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234-269.
  • said CD38 binding domain comprises a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234; or a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 212; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 235.
  • said EpCAM binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds EpCAM.
  • said antibody, or functional fragment or functional variant thereof comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
  • said variable domain of an IgG heavy chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
  • variable domain of an IgG heavy chain comprises a variable domain of an IgGl heavy chain
  • variable domain of an IgG light chain comprises a variable domain of an IgGl light chain
  • said antibody, or functional fragment or functional variant thereof comprises a scFv or a Fab.
  • said variable domain of an IgG heavy chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC- CDR3, wherein said HC-CDR1, the HC-CDR2, and the HC-CDR3 of said variable heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; and HC-CDR1: SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6.
  • CDRs complementarity determining regions
  • said variable domain of an IgG light chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of the heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: LC-CDR1: SEQ ID NO: 41; LC-CDR2: SEQ ID NO: 42; LC-CDR3 : SEQ ID NO: 43; and LC-CDR1: SEQ ID NO: 44; LC-CDR2: SEQ ID NO: 45; LC-CDR3 : SEQ ID NO: 46.
  • CDRs complementarity determining regions
  • variable domain of an IgG light chain (LC) of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, and said variable domain of an IgG heavy chain (HC) of said EpCAM binding domain comprises complementarity determining regions HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC-CD3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences comprise sequences with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to sequences as set forth in any one of the following sets of sequences: HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; LC-CDR1: SEQ ID NO:
  • variable domain of an IgG heavy chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 76-91, 260-261.
  • said variable domain of an IgG light chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 92-105, 262-268.
  • EpCAM binding domain comprises a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 76; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 92; or a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 77; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 93.
  • said multispecific antibody further comprises an IgG hinge region, or a portion thereof.
  • said multispecific antibody further comprises an Fc region.
  • said Fc region comprises an IgG CH2 domain and an IgG CH3 domain.
  • said IgG hinge region is C terminal to said CD38 binding domain or said EpCAM binding domain and N terminal to said Fc region.
  • said Fc region comprises a heterodimeric Fc region.
  • said Fc region comprises at least one amino acid modification that increases the half-life of the multispecific antibody.
  • said Fc region comprises at least one amino acid modification that modulates its interaction with an Fc receptor.
  • said Fc region comprises at least one amino acid modification that increases binding of said Fc region to an Fc receptor.
  • said Fc region comprises at least one amino acid modification that decreases glycosylation of the Fc region.
  • said modification is an amino acid substitution, deletion, or addition.
  • said modification is an amino acid substitution.
  • said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution at a position corresponding to position N297 of human IgGl, wherein the numbering is according to the EU index of Rabat.
  • said Fc region is afucosylated.
  • said Fc region comprises at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC).
  • ADCC antibody-dependent cellular cytotoxicity
  • said modification is an amino acid substitution, deletion, or addition. In some embodiments, said modification is an amino acid substitution.
  • said Fc region comprises at least one mutation that increases antibody-dependent cellular cytotoxicity (ADCC), wherein said at least one mutation that increases ADCC comprises an amino acid substitution at positions corresponding to positions S239, 1332, and A330 of human IgGl, wherein the amino acid numbering is according to the EU index according to Kabat et al.
  • said amino acid substitutions are S239D, I332E, and A330L, wherein the amino acid numbering is according to the EU index according to Kabat et al.
  • said heterodimeric Fc region wherein said heterodimeric Fc region comprises a knob chain and a hole chain, forming a knob-in-hole (KIH) structure.
  • said knob chain comprises an amino acid substitution at a position corresponding to T366 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • said T366 substitution comprises a T336W mutation, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, or Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, and Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said T366, L368, or Y407 amino acid substitutions comprise a T366S, L368A, or Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • said T366, L368, and Y407 amino acid substitutions comprises a T366S, L368A, and Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cell relative to a monospecific control antibody that comprises said CD38 binding domain but lacks an EpCAM binding domain, as determined by surface plasmon resonance.
  • said multispecific antibody binds to a target cell that expresses CD38 and EpCAM on the cell surface with a higher affinity relative to that of a monospecific control antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain, as determined by surface plasmon resonance.
  • said multispecific antibody induces enhanced antibody-dependent cellular cytotoxicity (ADCC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to ADCC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
  • said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more ADCC mediated lysis than said control monospecific antibody.
  • said multispecific antibody induces enhanced complement-dependent cytotoxicity (CDC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to CDC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
  • said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more CDC mediated lysis than said control monospecific antibody.
  • said target cell or population of target cells express a lower level of CD38 relative to EpCAM on the surface of said target cell.
  • the ratio of EpCAM to CD38 on the cell surface of said target cell or population of target cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
  • the ratio of EpCAM to CD38 on the surface of said target cell or population of target cells is greater than or equal to the ratio of EpCAM to CD38 on the surface of a DU145 cell or a CFPAC-1 cell.
  • said target cell or population of target cells comprises a cancer cell.
  • said cancer is an epithelial cell.
  • said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cancer cell than for CD38 expressed on the surface of a comparable non cancer cell, as determined by surface plasmon resonance.
  • EpCAM is expressed on the surface of said target cancer cell.
  • EpCAM is not expressed on the surface of said comparable non-cancer cell.
  • said cancer cell is an epithelial cell.
  • nucleic acid molecule encoding a multispecific antibody described herein.
  • a vector comprising a nucleic acid molecule described herein.
  • a pharmaceutical composition comprising a multispecific antibody described herein.
  • said pharmaceutical composition comprises pharmaceutically acceptable carrier, an excipient, or any combinations thereof.
  • a method of treating a subject having cancer comprising: administering to said subject a multispecific antibody described herein or a pharmaceutical composition described herein.
  • said cancer comprises cancer cells that express CD38 and EpCAM.
  • the ratio of EpCAM to CD38 on the surface of said cancer cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
  • said cancer cells that express CD38 and EpCAM are lysed.
  • said multispecific antibody induces antibody-dependent cellular cytotoxicity (ADCC) mediated killing of said cancer cells that express CD38 and EpCAM.
  • said multispecific antibody induces complement-dependent cytotoxicity (CDC) mediated killing of said cancer cells that express CD38 and EpCAM.
  • the cancer is a solid tumor. In some embodiments, said cancer is a carcinoma. In some embodiments, said carcinoma is an adenocarcinoma. In some embodiments, said cancer is prostate cancer or pancreatic cancer. In some embodiments, said method further comprises administering to said subject an anti-cancer agent. In some embodiments, said anti-cancer agent is a chemotherapeutic agent or a biologic agent.
  • FIG. 1 is a graphic depiction of a bispecific antibody described herein, which binds CD38 and EpCAM.
  • one antigen binding domain e.g., CD38
  • the other antigen binding domain can be a scFv (e.g., EpCAM), and vice versa, i.e. CD38 antigen binding domain is a scFv and the EpCAM binding domain is a Fab.
  • the CH3 regions of the constant heavy chain polypeptides are engineered to form a knob-in-hole structure to mediate formation of the bispecific antibody.
  • FIG. 2 is a line graph showing the results of an ADCC assay on epithelial DU145 cells (human prostate cancer cell line). DU145 cells express low levels of CD38 and high levels of EpCAM. The graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis). The data shows that two bispecific antibodies that bind to EpCAM and CD38 exhibits higher ADCC activity on DU145 cells compared to a bivalent monospecific anti-EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti-EpCAM antibody, and an isotype control human IgGl antibody. [0039] FIG.
  • FIG. 3 is a line graph showing the results of an ADCC assay on epithelial CFPAC-1 cells (human pancreatic adenocarcinoma cell line).
  • CFPAC-1 cells express low levels of CD38 and high levels of EpCAM.
  • the graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis).
  • the data shows that two bispecific antibodies that bind to EpCAM and CD38 exhibits higher ADCC activity on DU145 cells compared to a bivalent monospecific anti- EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti -EpCAM antibody, and an isotype control human IgGl antibody.
  • FIG. 4 is a line graph showing the results of an ADCC assay on DU 145 cells (human prostate cancer cell line).
  • DE1145 cells express low levels of CD38 and high levels of EpCAM.
  • the graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis).
  • the data shows that the bispecific antibody that binds to EpCAM and CD38 exhibits higher ADCC activity on DU 145 cells compared to a bivalent monospecific anti-EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti-EpCAM antibody, and an isotype control human IgGl antibody.
  • Antibodies that bind to CD38 are useful for the treatment of cancers that express CD38.
  • Anti- CD38 antibodies are thought to kill cancer cells by various mechanisms including antibody- dependent cell-mediated cytotoxicity (ADCC) and complement dependent cytotoxicity (CDC).
  • ADCC antibody- dependent cell-mediated cytotoxicity
  • CDC complement dependent cytotoxicity
  • One such antibody, daratumumab is approved for the treatment of adults with multiple myeloma.
  • ADCC antibody- dependent cell-mediated cytotoxicity
  • CDC complement dependent cytotoxicity
  • daratumumab is approved for the treatment of adults with multiple myeloma.
  • reduced or low expression of CD38 on cancer cells can limit the efficacy of anti-CD38 antibodies. Therefore, there is a need for new treatments that can target CD38 expressing cancers, while overcoming the limitations of current anti-CD38 immunotherapies.
  • CD38 also known as ADP-Ribosyl Cyclase 1
  • ADP-Ribosyl Cyclase 1 is an ectoenzyme that functions as both an enzymatic protein as well as a receptor expressed on the cell surface. While the role of CD38 in hematological malignancies has been extensively studied, the impact of CD38 expression within solid tumors is largely a new field of study. Anti-CD38 antibodies used in the treatment of hematological malignancies are thought to kill cancer cells by various mechanisms including antibody-dependent cell-mediated cytotoxicity (ADCC) and/or complement dependent cytotoxicity (CDC). However, low or reduced expression of CD38 on cancer cells can limit the efficacy of anti- CD38 antibodies in the treatment of solid tumors.
  • ADCC antibody-dependent cell-mediated cytotoxicity
  • CDC complement dependent cytotoxicity
  • EpCAM Epithelial cell adhesion molecule
  • CD236 Epithelial cell adhesion molecule
  • EpCAM is a type I transmembrane glycoprotein which functions as a homophilic Ca2+-independent cell-cell adhesion molecule. EpCAM is highly expressed in epithelial cancers; and while EpCAM is localized to the basolateral membrane in the normal epithelial tissue, it is uniformly membranous over-expressed in epithelial cancers.
  • the present disclosure is based, at least in part, on the discovery that multispecific antibodies comprising a CD38 binding domain and an EpCAM binding domain can overcome the problems of monospecific bivalent anti-CD38 antibodies by providing an increased local concentration of the anti-CD38 antibody to relevant cell populations (EpCAMT (high)/CD38+ (low)); thereby increasing the potency and ADCC mediated killing of target cancer cells.
  • ranges and amounts can be expressed as “about” a particular value or range. About also includes the exact amount. Hence “about 5 pL” means “about 5 pL” and also “5 pL.” Generally, the term “about” includes an amount that would be expected to be within experimental error.
  • antibody and “immunoglobulin” are used interchangeably herein and are used in the broadest sense and covers fully assembled antibodies, antibody fragments that can bind antigen, for example, Fab, F(ab’)2, Fv, single chain antibodies (scFv), diabodies, antibody chimeras, hybrid antibodies, bispecific antibodies, and the like.
  • mAb monoclonal antibody
  • mAb mAb
  • the terms “monoclonal antibody” and “mAb” are used interchangeably herein and refer to an antibody obtained from a substantially homogeneous population of antibodies, i.e., the individual antibodies of the population are identical except for possible naturally occurring mutations that may be present in minor amounts.
  • non-binding antibodies and “native immunoglobulins” are heterotetrameric glycoproteins of about 150,000 Daltons, composed of two identical light (L) chains and two identical heavy (H) chains. Each light chain is linked to a heavy chain by one covalent disulfide bond, while the number of disulfide linkages varies among the heavy chains of different immunoglobulin isotypes. Each heavy and light chain also has regularly spaced intrachain disulfide bridges. Each heavy chain has at one end a variable domain (VH) followed by a number of constant domains.
  • VH variable domain
  • Each light chain has a variable domain at one end (VL) and a constant domain at its other end; the constant domain of the light chain is aligned with the first constant domain of the heavy chain, and the light chain variable domain is aligned with the variable domain of the heavy chain. Particular amino acid residues are believed to form an interface between the light and heavy-chain variable domains.
  • the term “hypervariable region,” as used herein, refers to the amino acid residues of an antibody that are responsible for antigen-binding.
  • the hypervariable region comprises amino acid residues from a “complementarily determining region” or “CDR” (i.e., residues 24-34 (LI), 50-56 (L2), and 89-97 (L3) in the light-chain variable domain and 31-35 (HI), 50-65 (H2), and 95-102 (H3) in the heavy-chain variable domain; Kabat et al. (1991) Sequences of Proteins of Immunological Interest Fifth Edition, U.S. Department of Health and Human Services, NIH Publication No.
  • CDR complementarily determining region
  • 91- 3242 (referred to herein as “Kabat et al”)and/or those residues from a “hypervariable loop” (i.e., residues 26-32 (LI), 50-52 (L2), and 91-96 (L3) in the light-chain variable domain and (HI), 53-55 (H2), and 96-101 (13) in the heavy chain variable domain; Chothia and Lesk, (1987) J. Mol. Biol., 196:901-917).
  • “Framework” or “FR” residues are those variable domain residues other than the hypervariable region residues, as herein deemed.
  • the CDRs of an antibody is determined according to (i) the Kabat numbering system Kabat et al. (1991) Sequences of Proteins of Immunological Interest Fifth Edition, U.S. Department of Health and Human Services, NIH Publication No. 91-3242; or (ii) the Chothia numbering scheme, which will be referred to herein as the "Chothia CDRs" (see, e.g., Chothia and Lesk, 1987, J. Mol. Biol., 196:901-917; Al-Lazikani et al., 1997, J. Mol. Biol., 273 :927-948; Chothia et ak, 1992, J. Mol.
  • CDRs within an antibody heavy chain molecule are typically present at amino acid positions 31 to 35, which optionally can include one or two additional amino acids, following 35 (referred to in the Kabat numbering scheme as 35 A and 35B) (CDR1), amino acid positions 50 to 65 (CDR2), and amino acid positions 95 to 102 (CDR3).
  • CDR1 amino acid positions 31 to 35
  • CDR2 amino acid positions 50 to 65
  • CDR3 amino acid positions 95 to 102
  • CDRs within an antibody light chain molecule are typically present at amino acid positions 24 to 34 (CDR1), amino acid positions 50 to 56 (CDR2), and amino acid positions 89 to 97 (CDR3).
  • the actual linear amino acid sequence of the antibody variable domain can contain fewer or additional amino acids due to a shortening or lengthening of a FR and/or CDR and, as such, an amino acid’s Rabat number is not necessarily the same as its linear amino acid number.
  • antibody fragment refers to a molecule that comprises a portion of an intact antibody, preferably the antigen-binding or variable region of the intact antibody.
  • antibody fragments include Fab, Fab, F(ab’)2, Fv fragments, and single chain fragment variable (scFv); diabodies; linear antibodies (Zapata et al. (1995) Protein Eng. 10:1057-1062); single-chain antibody molecules; and multispecific antibodies formed from antibody fragments.
  • Papain digestion of antibodies produces two identical antigen-binding fragments, called “Fab” fragments, each with a single antigen-binding site, and a residual “Fc” fragment, whose name reflects its ability to crystallize readily.
  • Pepsin treatment yields an F(ab’)2 fragment that has two antigen-combining sites and is still capable of cross-linking antigen.
  • Fv refers to the minimum antibody fragment that contains a complete antigen recognition and binding site. This region consists of a dimer of one heavy- and one light-chain variable domain in tight, non-covalent association. It is in this configuration that the three CDRs of each variable domain interact to define an antigen-binding site on the surface of the VH- VL dimer. Collectively, the six CDRs confer antigen-binding specificity to the antibody. However, even a single variable domain (or half of an Fv comprising only three CDRs specific for an antigen) has the ability to recognize and bind antigen, although at a lower affinity than the entire binding site.
  • Fab refers to a protein that contains the constant domain of the light chain and the first constant domain (CHI) of the heavy chain.
  • Fab fragments differ from Fab’ fragments by the addition of a few residues at the carboxy terminus of the heavy chain CHI domain including one or more cysteines from the antibody hinge region.
  • Fab’-SH is the designation herein for Fab’ in which the cysteine residue(s) of the constant domains bear a free thiol group.
  • Fab’ fragments are produced by reducing the F(ab’)2 fragment’s heavy chain disulfide bridge. Other chemical couplings of antibody fragments are also known.
  • a “single-chain variable fragment (scFv)” is a fusion protein of the variable regions of the heavy (VH) and light chains (VL) of an antibody, connected with a short linker peptide of ten to about 25 amino acids.
  • the linker is usually rich in glycine for flexibility, as well as serine or threonine for solubility, and can either connect the N-terminus of the VH with the C-terminus of the VL, or vice versa.
  • This protein retains the specificity of the original antibody, despite removal of the constant regions and the introduction of the linker.
  • scFv antibodies are, e.g. described in Houston, J. S., Methods in Enzymol. 203 (1991) 46-96).
  • antibody fragments comprise single chain polypeptides having the characteristics of a VH domain, namely being able to assemble together with a VL domain, or of a VL domain, namely being able to assemble together with a VH domain to a functional antigen binding site and thereby providing the antigen binding property of full length antibodies.
  • an antigen-binding site refers to the part of the antigen binding molecule that specifically binds to an antigenic determinant. More particularly, the term “antigen binding site” refers the part of an antibody that comprises the area which specifically binds to and is complementary to part or all of an antigen. Where an antigen is large, an antigen binding molecule may only bind to a particular part of the antigen, which part is termed an epitope.
  • An antigen-binding site may be provided by, for example, one or more variable domains (also called variable regions).
  • an antigen-binding site comprises an antibody light chain variable region (VL) and an antibody heavy chain variable region (VH).
  • ELISA enzyme-linked immunosorbent assay
  • SPR Surface Plasmon Resonance
  • the extent of binding of an antigen binding molecule to an unrelated protein is less than about 10% of the binding of the antigen binding molecule to the antigen as measured, e.g. by SPR.
  • an molecule that binds to the antigen has a dissociation constant (Kd) of ⁇ 1 mM, ⁇ 100 nM, ⁇ 10 nM, ⁇ 1 nM, ⁇ 0.1 nM, ⁇ 0.01 nM, or ⁇ 0.001 nM (e.g. 10-7 M or less, e.g. from 10-7M to 10-13 M, e.g. from 10-9 M to 10-13 M).
  • immunoglobulins can be assigned to different classes. There are five major classes of human immunoglobulins: IgA, IgD, IgE, IgG, IgM, and IgY , and several of these may be further divided into subclasses (isotypes), e.g., IgGl, IgG2, IgG3, IgG4, IgAl, and IgA2.
  • the heavy-chain constant domains that correspond to the different classes of immunoglobulins are called alpha, delta, epsilon, gamma, and mu, respectively.
  • the subunit structures and three-dimensional configurations of different classes of immunoglobulins are well known.
  • IgGl and IgG3 isotypes have different effector functions.
  • human IgGl and IgG3 isotypes have ADCC (antibody dependent cell- mediated cytotoxicity) activity.
  • the light chains of antibodies (immunoglobulins) from any vertebrate species can be assigned to one of two clearly distinct types, called kappa (K) and lambda (l), based on the amino acid sequences of their constant domains.
  • chimeric antibody refers to an antibody in which a portion of the heavy and/or light chain is derived from a particular source (e.g., protein) or species, while the remainder of the heavy and/or light chain is derived from a different source (e.g., protein) or species.
  • recombinant human antibody is intended to include all human antibodies that are prepared, expressed, created or isolated by recombinant means, such as antibodies isolated from a host cell such as a NSO or CHO cell or from an animal (e.g. a mouse) that is transgenic for human immunoglobulin genes or antibodies expressed using a recombinant expression vector transfected into a host cell.
  • Such recombinant human antibodies have variable and constant regions in a rearranged form.
  • the recombinant human antibodies have been subjected to in vivo somatic hypermutation.
  • the amino acid sequences of the VH and VL regions of the recombinant antibodies are sequences that, while derived from and related to human germ line VH and VL sequences, may not naturally exist within the human antibody germ line repertoire in vivo.
  • the term “valent” as used herein denotes the presence of a specified number of binding sites in an antigen binding molecule.
  • bispecific antibodies denote the presence of two binding sites, four binding sites, and six binding sites, respectively, in an antigen binding molecule.
  • the bispecific antibodies according to the invention are at least “bivalent” and may be “trivalent” or “multivalent” (e.g. “tetravalent” or “hexavalent”).
  • the antibodies of the present invention have two or more binding sites and are bispecific. That is, the antibodies may be bispecific even in cases where there are more than two binding sites (i.e. that the antibody is trivalent or multivalent).
  • the invention relates to bispecific bivalent antibodies, having one binding site for each antigen they specifically bind to.
  • the term “monospecific” antibody as used herein denotes an antibody that has one or more binding sites each of which bind to the same epitope of the same antigen.
  • the term “bispecific” means that the antibody is able to specifically bind to at least two distinct antigenic determinants, for example two binding sites each formed by a pair of an antibody heavy chain variable domain (VH) and an antibody light chain variable domain (VL) binding to different antigens or to different epitopes on the same antigen.
  • VH antibody heavy chain variable domain
  • VL antibody light chain variable domain
  • Such a bispecific antibody is an 1+1 format.
  • bispecific antibody formats are 2+1 formats (comprising two binding sites for a first antigen or epitope and one binding site for a second antigen or epitope) or 2+2 formats (comprising two binding sites for a first antigen or epitope and two binding sites for a second antigen or epitope).
  • a bispecific antibody comprises two antigen binding sites, each of which is specific for a different antigenic determinant.
  • a health care worker e.g. a doctor, a registered nurse, a nurse practitioner, a physician’s assistant, an orderly or a hospice worker.
  • percent (%) amino acid sequence identity with respect to a sequence is defined as the percentage of amino acid residues in a candidate sequence that are identical with the amino acid residues in the specific sequence, after aligning the sequences and introducing gaps, if necessary, to achieve the maximum percent sequence identity, and not considering any conservative substitutions as part of the sequence identity. Alignment for purposes of determining percent amino acid sequence identity can be achieved in various ways that are within the skill in the art, for instance, using publicly available computer software such as EMBOSS MATCHER, EMBOSS WATER, EMBOSS STRETCHER, EMBOSS NEEDLE, EMBOSS LALIGN, BLAST, BLAST-2, ALIGN or Megalign (DNASTAR) software. Those skilled in the art can determine appropriate parameters for measuring alignment, including any algorithms needed to achieve maximal alignment over the full length of the sequences being compared.
  • cancer and “tumor” are used interchangeably herein, encompass all types of oncogenic processes and/or cancerous growths.
  • cancer includes primary tumors as well as metastatic tissues or malignantly transformed cells, tissues, or organs.
  • cancer encompasses all histopathologies and stages, e.g., stages of invasiveness/severity, of a cancer.
  • cancer includes relapsed and/or resistant cancer.
  • treatment refers to clinical intervention in an attempt to alter the natural course of the individual being treated, and can be performed either for prophylaxis or during the course of clinical pathology. Desirable effects of treatment include, but are not limited to, preventing occurrence or recurrence of disease, alleviation of symptoms, diminishment of any direct or indirect pathological consequences of the disease, preventing metastasis, decreasing the rate of disease progression, amelioration or palliation of the disease state, and remission or improved prognosis.
  • the molecules of the invention are used to delay development of a disease or to slow the progression of a disease.
  • ADCC antibody-dependent cellular cytotoxicity
  • non-specific cytotoxic cells e.g., Natural Killer (NK) cells, neutrophils, and macrophages
  • NK Natural Killer
  • macrophages e.g., neutrophils, and macrophages
  • the EpCAM binding domain comprises an antibody or antigen binding fragment or variant thereof. In some embodiments, antibody or antigen binding fragment or variant thereof is a monoclonal antibody. In some embodiments, antibody or antigen binding fragment or variant thereof is a human antibody, a murine antibody, a humanized antibody, or a chimeric antibody. In some embodiments, the EpCAM binding domain comprises a monovalent Fab, a bivalent Fab’2, a single-chain variable fragment (scFv), or functional fragment or variant thereof. In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable heavy chain domain (VH). In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable light chain domain (VL). In some embodiments, the EpCAM binding domain comprises a VH and a VL.
  • the multispecific antibodies, and binding fragments thereof are derived from non-human (e.g. rabbit or mouse) antibodies.
  • the humanized form of the non-human antibody contains a minimal non-human sequence to maintain original antigenic specificity.
  • the humanized antibodies are human immunoglobulins (acceptor antibody), wherein the CDRs of the acceptor antibody are replaced by residues of the CDRs of a non human immunoglobulin (donor antibody), such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity.
  • donor antibody such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity.
  • one or more framework region (FR) residues of the human immunoglobulin are replaced by corresponding non human residues of the donor antibody.
  • CDRs Complementarity Determining Regions
  • the EpCAM binding domain comprises an immunoglobulin variable heavy chain domain (VH) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 1 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH immunoglobulin variable heavy chain domain
  • CDRs complementarity determining regions
  • the EpCAM binding domain comprises an immunoglobulin variable light chain domain (VL) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 2 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VL immunoglobulin variable light chain domain
  • CDRs complementarity determining regions
  • the EpCAM binding domain comprises a VH that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 1 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 2 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • CDRs complementarity determining regions
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 1, a CDR2 of SEQ ID NO: 2, and a CDR3 of SEQ ID NO: 3.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 4, a CDR2 of SEQ ID NO: 5, and a CDR3 of SEQ ID NO: 6.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 7, a CDR2 of SEQ ID NO: 8, and a CDR3 of SEQ ID NO: 9.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 10, a CDR2 of SEQ ID NO: 11, and a CDR3 of SEQ ID NO: 12. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 13, a CDR2 of SEQ ID NO: 14, and a CDR3 of SEQ ID NO: 15. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 16, a CDR2 of SEQ ID NO: 17, and a CDR3 of SEQ ID NO: 18.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 19, a CDR2 of SEQ ID NO: 20, and a CDR3 of SEQ ID NO: 21. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 22, a CDR2 of SEQ ID NO: 23, and a CDR3 of SEQ ID NO: 24. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 25, a CDR2 of SEQ ID NO: 26, and a CDR3 of SEQ ID NO: 27.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 28, a CDR2 of SEQ ID NO: 29, and a CDR3 of SEQ ID NO: 30. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 32, and a CDR3 of SEQ ID NO: 33. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 34, a CDR2 of SEQ ID NO: 35, and a CDR3 of SEQ ID NO: 36.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 37, and a CDR3 of SEQ ID NO: 33. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 38, a CDR2 of SEQ ID NO: 39, and a CDR3 of SEQ ID NO: 40. [0075] In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 41, a CDR2 of SEQ ID NO: 42, and a CDR3 of SEQ ID NO: 43.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 44, a CDR2 of SEQ ID NO: 45, and a CDR3 of SEQ ID NO: 46. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 47, a CDR2 of SEQ ID NO: 48, and a CDR3 of SEQ ID NO: 48. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 50, a CDR2 of SEQ ID NO: 51, and a CDR3 of SEQ ID NO: 52.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 53, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 56, a CDR2 of SEQ ID NO: 57, and a CDR3 of SEQ ID NO: 58. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 59, a CDR2 of SEQ ID NO: 60, and a CDR3 of SEQ ID NO: 61.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 62, a CDR2 of SEQ ID NO: 63, and a CDR3 of SEQ ID NO: 64.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 65, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 66, a CDR2 of SEQ ID NO: 67, and a CDR3 of SEQ ID NO: 68.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 72, a CDR2 of SEQ ID NO: 73, and a CDR3 of SEQ ID NO: 74.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71.
  • the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 75, a CDR2 of SEQ ID NO: 76, and a CDR3 of SEQ ID NO: 77.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 1, a CDR2 of SEQ ID NO: 2, and a CDR3 of SEQ ID NO: 3; and a VL that comprises a CDR1 of SEQ ID NO: 41, a CDR2 of SEQ ID NO: 42, and a CDR3 of SEQ ID NO: 43.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 4, a CDR2 of SEQ ID NO: 5, and a CDR3 of SEQ ID NO: 6; and a VL that comprises a CDR1 of SEQ ID NO: 44, a CDR2 of SEQ ID NO: 45, and a CDR3 of SEQ ID NO: 46.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 7, a CDR2 of SEQ ID NO: 8, and a CDR3 of SEQ ID NO: 9, and a VL that comprises a CDR1 of SEQ ID NO: 47, a CDR2 of SEQ ID NO: 48, and a CDR3 of SEQ ID NO: 49.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 10, a CDR2 of SEQ ID NO: 11, and a CDR3 of SEQ ID NO: 12, and a VL that comprises a CDR1 of SEQ ID NO: 50, a CDR2 of SEQ ID NO: 51, and a CDR3 of SEQ ID NO: 52.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 13, a CDR2 of SEQ ID NO: 14, and a CDR3 of SEQ ID NO: 15, and a VL that comprises a CDR1 of SEQ ID NO: 53, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 16, a CDR2 of SEQ ID NO: 17, and a CDR3 of SEQ ID NO: 18, and a VL that comprises a CDR1 of SEQ ID NO: 56, a CDR2 of SEQ ID NO: 57, and a CDR3 of SEQ ID NO: 58.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 19, a CDR2 of SEQ ID NO: 20, and a CDR3 of SEQ ID NO: 21, and a VL that comprises a CDR1 of SEQ ID NO: 59, a CDR2 of SEQ ID NO: 60, and a CDR3 of SEQ ID NO: 61.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 22, a CDR2 of SEQ ID NO: 23, and a CDR3 of SEQ ID NO: 24, and a VL that comprises a CDR1 of SEQ ID NO: 62, a CDR2 of SEQ ID NO: 63, and a CDR3 of SEQ ID NO: 64.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 25, a CDR2 of SEQ ID NO: 26, and a CDR3 of SEQ ID NO: 27, and a VL that comprises a CDR1 of SEQ ID NO: 65, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 28, a CDR2 of SEQ ID NO: 29, and a CDR3 of SEQ ID NO: 30, and a VL that comprises a CDR1 of SEQ ID NO: 66, a CDR2 of SEQ ID NO: 67, and a CDR3 of SEQ ID NO: 68.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 32, and a CDR3 of SEQ ID NO: 33, and a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 34, a CDR2 of SEQ ID NO: 35, and a CDR3 of SEQ ID NO: 36, and a VL that comprises a CDR1 of SEQ ID NO: 72, a CDR2 of SEQ ID NO: 73, and a CDR3 of SEQ ID NO: 74.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 37, and a CDR3 of SEQ ID NO: 33, and a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71.
  • the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 38, a CDR2 of SEQ ID NO:391, and a CDR3 of SEQ ID NO: 40, and a VL that comprises a CDR1 of SEQ ID NO: 75, a CDR2 of SEQ ID NO: 76, and a CDR3 of SEQ ID NO: 77.
  • a CDR described herein comprises one, two, or three amino acid modifications. In some embodiments, said modification is a substitution, addition, or deletion. In some embodiments, a CDR described herein comprises one, two, or three conservative amino acid substitutions. In some embodiments, the one, two, or three amino acid modifications does not substantially modify binding to human EpCAM. In some embodiments, the one, two, or three amino acid modifications modifies binding to human EpCAM. In some embodiments, a VH-CDR3 and/or VL-CDR3 comprises an amino acid substitution that modifies binding to human EpCAM, immunogenicity, or some other feature. In some embodiments, the amino acid substitution is an alanine (A). Variable Heavy and Variable Light Regions
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 3 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence disclosed in Table 4 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 3 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence disclosed in Table 4 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 79, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 80, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 81, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 82, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 83, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 84, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 85, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 86, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 87, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 88, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 89, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 90, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 91, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 93, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 94, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 95, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 96, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 97, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 98, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 99, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 100, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 101, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 102, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 103, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 104, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 105, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 262, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 263, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 264, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 265, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 79, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 93, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 79, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 80, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 94, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence of SEQ ID NO: 80, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 81, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 95, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 82, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 96, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 83, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 97, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 84, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 98, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 85, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 99, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 85, or a sequence substantially identical thereto (e.g., a sequence
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 86, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 100, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 87, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 101, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 87, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 88, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 102, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 88, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 89, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 103, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 90, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 104, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence of SEQ ID NO: 90, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 91, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 105, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 91, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 262, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 263, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 264, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 265, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g.,
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises an antibody or antigen binding fragment or variant thereof.
  • antibody or antigen binding fragment or variant thereof is a monoclonal antibody.
  • antibody or antigen binding fragment or variant thereof is a human antibody, a murine antibody, a humanized antibody, or a chimeric antibody.
  • the CD38 binding domain comprises a monovalent Fab, a bivalent Fab’2, a single-chain variable fragment (scFv), or functional fragment or variant thereof.
  • the CD38 binding domain comprises an immunoglobulin variable heavy chain domain (VH).
  • the CD38 binding domain comprises an immunoglobulin variable light chain domain (VL).
  • the CD38 binding domain comprises a VH and a VL.
  • the multispecific antibodies, and binding fragments thereof are derived from non-human (e.g. rabbit or mouse) antibodies.
  • the humanized form of the non-human antibody contains a minimal non-human sequence to maintain original antigenic specificity.
  • the humanized antibodies are human immunoglobulins (acceptor antibody), wherein the CDRs of the acceptor antibody are replaced by residues of the CDRs of a non human immunoglobulin (donor antibody), such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity.
  • donor antibody such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity.
  • one or more framework region (FR) residues of the human immunoglobulin are replaced by corresponding non human residues of the donor antibody.
  • CDRs Complementarity Determining Regions
  • the CD38 binding domain comprises an immunoglobulin variable heavy chain domain (VH) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 5 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH immunoglobulin variable heavy chain domain
  • CDRs complementarity determining regions
  • the CD38 binding domain comprises an immunoglobulin variable light chain domain (VL) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 6 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VL immunoglobulin variable light chain domain
  • CDRs complementarity determining regions
  • the CD38 binding domain comprises a VH that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 5 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 6 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • CDRs complementarity determining regions
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 109, a CDR2 of SEQ ID NO: 110, and a CDR3 of SEQ ID NO: 111.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 113, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 114, a CDR2 of SEQ ID NO: 115, and a CDR3 of SEQ ID NO: 116.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 117, a CDR2 of SEQ ID NO: 118, and a CDR3 of SEQ ID NO: 119.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 120, a CDR2 of SEQ ID NO: 121, and a CDR3 of SEQ ID NO: 122.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 123, a CDR2 of SEQ ID NO: 124, and a CDR3 of SEQ ID NO: 125.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 126, a CDR2 of SEQ ID NO: 127, and a CDR3 of SEQ ID NO: 128.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 129, a CDR2 of SEQ ID NO: 130, and a CDR3 of SEQ ID NO: 131.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 132, a CDR2 of SEQ ID NO: 133, and a CDR3 of SEQ ID NO: 134.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 135, a CDR2 of SEQ ID NO: 136, and a CDR3 of SEQ ID NO: 137.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 138, a CDR2 of SEQ ID NO: 139, and a CDR3 of SEQ ID NO: 140.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 141, a CDR2 of SEQ ID NO: 142, and a CDR3 of SEQ ID NO: 143.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 144, a CDR2 of SEQ ID NO: 145, and a CDR3 of SEQ ID NO: 146.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 147, a CDR2 of SEQ ID NO: 148, and a CDR3 of SEQ ID NO: 149.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 150, a CDR2 of SEQ ID NO: 151, and a CDR3 of SEQ ID NO: 152.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 153, a CDR2 of SEQ ID NO: 154, and a CDR3 of SEQ ID NO: 155.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 156, a CDR2 of SEQ ID NO: 157, and a CDR3 of SEQ ID NO: 158.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 159, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 283, and a CDR3 of SEQ ID NO: 108 [00182] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 160, a CDR2 of SEQ ID NO: 161, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 162, a CDR2 of SEQ ID NO: 163, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 166.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 167, a CDR2 of SEQ ID NO: 168, and a CDR3 of SEQ ID NO: 169.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 170, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 172, a CDR2 of SEQ ID NO: 173, and a CDR3 of SEQ ID NO: 174.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 175, a CDR2 of SEQ ID NO: 176, and a CDR3 of SEQ ID NO: 177.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 178, a CDR2 of SEQ ID NO: 179, and a CDR3 of SEQ ID NO: 180.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 183.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 184, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 186.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 187, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 189.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 191.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 192.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 193, a CDR2 of SEQ ID NO: 194, and a CDR3 of SEQ ID NO: 195.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 196, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 197.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 198, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 199.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 200, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 201.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 202, a CDR2 of SEQ ID NO: 203, and a CDR3 of SEQ ID NO: 204.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 205.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 206, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 207.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 208, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 209.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 166.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
  • the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 210.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108; and a VL that comprises a CDR1 of SEQ ID NO: 176, a CDR2 of SEQ ID NO: 177, and a CDR3 of SEQ ID NO: 178.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 109, a CDR2 of SEQ ID NO: 110, and a CDR3 of SEQ ID NO: 111; and a VL that comprises a CDR1 of SEQ ID NO: 179, a CDR2 of SEQ ID NO: 180, and a CDR3 of SEQ ID NO: 181.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 113, and a CDR3 of SEQ ID NO: 108, and a VL that comprises a CDR1 of SEQ ID NO: 182, a CDR2 of SEQ ID NO: 177, and a CDR3 of SEQ ID NO: 183.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 114, a CDR2 of SEQ ID NO: 115, and a CDR3 of SEQ ID NO: 116, and a VL that comprises a CDR1 of SEQ ID NO: 172, a CDR2 of SEQ ID NO: 173, and a CDR3 of SEQ ID NO: 174.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 117, a CDR2 of SEQ ID NO: 118, and a CDR3 of SEQ ID NO: 119, and a VL that comprises a CDR1 of SEQ ID NO: 175, a CDR2 of SEQ ID NO: 176, and a CDR3 of SEQ ID NO: 177.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 120, a CDR2 of SEQ ID NO: 121, and a CDR3 of SEQ ID NO: 122, and a VL that comprises a CDR1 of SEQ ID NO: 178, a CDR2 of SEQ ID NO: 179, and a CDR3 of SEQ ID NO: 180.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 123, a CDR2 of SEQ ID NO: 124, and a CDR3 of SEQ ID NO: 125, and a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 183.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 126, a CDR2 of SEQ ID NO: 127, and a CDR3 of SEQ ID NO: 128, and a VL that comprises a CDR1 of SEQ ID NO: 184, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 186.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 129, a CDR2 of SEQ ID NO: 130, and a CDR3 of SEQ ID NO: 131, and a VL that comprises a CDR1 of SEQ ID NO: 187, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 189.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 132, a CDR2 of SEQ ID NO: 133, and a CDR3 of SEQ ID NO: 134, and a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO:
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 135, a CDR2 of SEQ ID NO: 136, and a CDR3 of SEQ ID NO: 137, and a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO:
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 138, a CDR2 of SEQ ID NO: 139, and a CDR3 of SEQ ID NO: 140, and a VL that comprises a CDR1 of SEQ ID NO: 193, a CDR2 of SEQ ID NO: 194, and a CDR3 of SEQ ID NO: 195.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 141, a CDR2 of SEQ ID NO: 142, and a CDR3 of SEQ ID NO: 143, and a VL that comprises a CDR1 of SEQ ID NO: 196, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 197.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 144, a CDR2 of SEQ ID NO: 145, and a CDR3 of SEQ ID NO: 146, and a VL that comprises a CDR1 of SEQ ID NO: 198, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 199.
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 147, a CDR2 of SEQ ID NO: 148, and a CDR3 of SEQ ID NO: 149, and a VL that comprises a CDR1 of SEQ ID NO: 200, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 201
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 150, a CDR2 of SEQ ID NO: 151, and a CDR3 of SEQ ID NO: 152, and a VL that comprises a CDR1 of SEQ ID NO: 202, a CDR2 of SEQ ID NO: 203, and a CDR3 of SEQ ID NO:
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 153, a CDR2 of SEQ ID NO: 154, and a CDR3 of SEQ ID NO: 155, and a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO:
  • the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 156, a CDR2 of SEQ ID NO: 157, and a CDR3 of SEQ ID NO: 158, and a VL that comprises a CDR1 of SEQ ID NO: 206, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 207.
  • a CDR described herein comprises one, two, or three amino acid modifications.
  • said modification is a substitution, addition, or deletion.
  • a CDR described herein comprises one, two, or three conservative amino acid substitutions.
  • the one, two, or three amino acid modifications does not substantially modify binding to human CD38.
  • the one, two, or three amino acid modifications modifies binding to human CD38.
  • a VH-CDR3 and/or VL- CDR3 comprises an amino acid substitution that modifies binding to human CD38, immunogenicity, or some other feature.
  • the amino acid substitution is an alanine (A).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 7 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence disclosed in Table 8 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 7 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence disclosed in Table 8 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence disclosed in Table 7 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%,
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 212, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 213, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 214, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 215, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 216, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 217, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 218, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 219, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 220, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 221, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 222, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 223, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 224, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 225, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 226, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 227, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 228, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 229, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 230, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 231, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 232, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 233, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 234, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 235, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 236, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 237, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 238, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 239, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 240, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 241, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 242, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 243, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 244, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 245, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 246, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 247, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 248, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 249, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 250, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 251, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 252, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 253, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 254, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 255, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 256, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 257, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 258, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 259, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 234, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 212, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 235, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 212, or a sequence substantially identical thereto (e.g.,
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 213, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 236, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence of SEQ ID NO: 213, or a sequence substantially identical thereto (e.g.,
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 214, 215, 216, 217, 218, or 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 237, 238, 239, 240, 241, 242, 234, 243, or 244, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 219, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 245, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 220, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 246, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 221, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 247, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 222, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 248, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 223, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 249, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 224, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 250, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 225, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 251, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 226, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 252, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence of SEQ ID NO: 226, or a sequence substantially identical thereto (e.g.,
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 227, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 253, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 228, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 254, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • a VH that comprises an amino acid sequence of SEQ ID NO: 228, or a sequence substantially identical thereto (e.g.,
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 229, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 255, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 230, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 256, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 231, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 257, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 232, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 258, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 233, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 259, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
  • VH that comprises an amino acid sequence of SEQ ID NO: 233, or a sequence substantially identical thereto (e.g.,
  • multispecific antibodies comprising a CD38 binding domain (e.g., as described herein) and an EpCAM binding domain (e.g., as described herein).
  • the multispecific antibody is bivalent (i.e. contains two antigen binding domains), trivalent, or tetravalent.
  • the multispecific antibody comprises at least two, three, or four binding domains that bind CD38.
  • each of said two, three, or four binding domains that bind CD38 can be the same or different.
  • the multispecific antibody comprises at least two, three, or four binding domains that bind EpCAM.
  • each of said two, three, or four binding domains that bind EpCAM can be the same or different.
  • the multispecific antibody is bispecific, trispecific, or tetraspecific.
  • the multispecific antibody is a heterodimeric antibody.
  • the antibody comprises four polypeptide chains, wherein a first polypeptide comprises a VH domain, a CHI domain, a hinge, a CH2 domain, and a CH3 domain, and pairs with a second polypeptide chain that comprises a VL and a CL domain, wherein said VH and VL form a binding domain that binds CD38; and a third polypeptide comprises a VH domain, a CHI domain, a hinge, a CH2 domain, and a CH3 domain, and pairs with a second polypeptide chain that comprises a VL and a CL domain, wherein said VH and VL form a binding domain that binds EpCAM; and wherein said first polypeptide and said third polypeptide pair via one or more disulfide bond.
  • the multispecific antibody comprises two antibody fragments connected to an antibody Fc region.
  • the antibody comprises three polypeptides, wherein the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a scFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
  • the antibody comprises three polypeptides, wherein the CD38 binding domain comprises a ScFv, and the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
  • the CD38 binding domain comprises a Fab
  • the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
  • the CD38 binding domain comprises a ScFv
  • the EpCAM binding domain comprises a ScFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
  • the CD38 binding domain comprises a Fab
  • the EpCAM binding domain comprises a scFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to the N terminus of an Fc region.
  • the CD38 binding domain comprises a ScFv
  • the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to the N terminus of an Fc region.
  • the CD38 binding domain comprises a Fab
  • the EpCAM binding domain comprises a scFv, wherein the Fab is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the ScFv is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
  • the CD38 binding domain comprises a Fab
  • the EpCAM binding domain comprises a scFv, wherein the ScFv is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the Fab is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
  • the EpCAM binding domain comprises a Fab
  • the CD38 binding domain comprises a scFv, wherein the Fab is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the ScFv is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
  • the EpCAM binding domain comprises a Fab
  • the CD38 binding domain comprises a scFv, wherein the ScFv is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the Fab is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
  • the multispecific antibodies disclosed herein include an immunoglobulin constant region (e.g., an Fc region).
  • an immunoglobulin constant region e.g., an Fc region
  • Exemplary Fc regions can be chosen from the heavy chain constant regions of IgGl, IgG2, IgG3 or IgG4; more particularly, the heavy chain constant region of human IgGl or IgG4.
  • the immunoglobulin constant region e.g., the Fc region
  • an interface of a first and second immunoglobulin constant regions is altered, e.g., mutated, to increase or decrease dimerization, e.g., relative to a non-engineered interface, e.g., a naturally-occurring interface.
  • dimerization of the immunoglobulin chain constant region can be enhanced by providing an Fc interface of a first and a second Fc region with one or more of: a paired protuberance-cavity (“knob-in-a hole”), an electrostatic interaction, or a strand-exchange, such that a greater ratio of heteromul timer to homomultimer forms, e.g., relative to a non-engineered interface.
  • the multispecific antibody comprises at least one amino acid modification in the Fc region.
  • a modification includes an amino acid substitution, deletion, or addition.
  • the at least one mutation comprises an amino acid substitution.
  • the at least one amino acid modification (e.g., substitution) modulates the half-life of the antibody; ability of the antibody to induce ADCC, ADCP, and/or CDC activity against a target cell; modulate stability of the antibody; and/or glycosylation of the antibody.
  • the multispecific antibody comprises at least one amino acid modification that increases stability the antibody and/or increases half-life of the antibody.
  • the antibody comprises an amino acid modification (e.g., substitution) that increases half-life of the antibody, and said modification is at one or more of positions T250, M252, S254, T256, M428, H433, N434 of IgGl (numbering according to EU as described in Kabat et al.), or any combination thereof.
  • the antibody comprises a T250Q and an M428L substitutions (numbering according to EU as described in Kabat et al.).
  • the antibody comprises a M252Y, S254T, and T256E substitutions (numbering according to EU as described in Kabat et al.).
  • said antibody comprises a H433K and a N434F substitution (numbering according to EU as described in Kabat et al.).
  • the multispecific antibody comprises at least one mutation that increases ADCC. In some embodiments, the multispecific antibody comprises at least one mutation that increases antibody-dependent cellular-mediated phagocytosis (ADCP). In some embodiments, the multispecific antibody comprises at least one mutation that increases CDC.
  • ADCP antibody-dependent cellular-mediated phagocytosis
  • the multispecific antibody comprises a modification at least one amino acid position in the Fc region that alters an Fc receptor interaction that leads to increased ADCC.
  • the modification comprises an amino acid substitution at an amino acid position corresponding to S239, K326, A330, 1332, E333 of IgGl (EU numbering according to Kabat), or any combination thereof.
  • the multispecific antibody comprises amino acid substitutions: E333A, S239D/A330L/I332E, or K326W/E333S of IgGl (EU numbering according to Kabat), or any combination thereof.
  • the multispecific antibody comprises amino acid substitutions S239D/A330L/I332E of IgGl (EU numbering according to Kabat). In some embodiments, the multispecific antibody comprises amino acid substitutions: K326W/E333S of IgGl (EU numbering according to Kabat).
  • the human IgG constant region is modified to alter its ADCC and/or ADCP activity, e.g., with an amino acid modification described in Natsume et al., 2008 Cancer Res, 68(10): 3863-72; Idusogie et al., 2001 J Immunol, 166(4): 2571-5; Moore et al., 2010 mAbs, 2(2): 181- 189; Lazar et al., 2006 PNAS, 103(11): 4005-4010, Shields et al., 2001 JBC, 276( 9): 6591- 6604; Stavenhagen et al., 2007 Cancer Res, 67(18): 8882-8890; Stavenhagen et al., 2008 Advan. Enzyme Regul., 48: 152-164; Alegre et al, 1992 J Immunol, 148: 3461-3468; Reviewed in Kaneko and Niwa, 2011 Biodrugs, 25
  • the multispecific antibody is modified at least one amino acid position to alter interaction with an Fc receptor.
  • Exemplary residues that modulate Fc receptor interactions include, but are not limited to, G236, S239, T250, M252, S254, T256, K326, A330, 1332, E333A, M428, H433, or N434 of IgGl (EU numbering according to Rabat).
  • the mutation comprises G236A, S239D, T250Q, M252Y, S254T, T256E, K326W, A330L, I332E, E333A, E333S, M428L, H433K, or N434F of IgGl (EU numbering according to Rabat), or any combination thereof.
  • an amino acid corresponding to amino acid N297 in IgGl is mutated to alter glycosylation of said antibody.
  • the Fc region is deglycosylated at residue N297.
  • the multispecific antibody described herein has reduced or lacks glycosylation but is not modified at amino acid N297 (Rabat numbering).
  • the glycosylation is, for example, eliminated by production of the antibody in a host cell that lacks a post- translational glycosylation capacity, for example a bacterial or yeast derived system or a modified mammalian cell expression system.
  • the cell is a mammalian cell such as a Chinese Hamster Ovary cell line.
  • the cell is unable to express fucosyltransferase 8 (FUT8).
  • FUT8 fucosyltransferase 8
  • such a system is a cell-free expression system.
  • the IgGl constant region is afucosylated. In other embodiments, the IgGl is expressed in cells incapable of fucosylation. In some embodiments, the cell is a mammalian cell such as a Chinese Hamster Ovary cell line. In some embodiments, the cell is unable to express fucosyltransferase 8 (FUT8).
  • FUT8 fucosyltransferase 8
  • multispecific antibodies e.g., bispecific antibodies
  • Exemplary methods are described below.
  • Exemplary multispecific antibody formats and methods of making said multispecific antibodies are also disclosed in e.g., Speiss et al. Molecular Immunology 67 (2015) 95-106; and Klein et al mAbs 4:6, 653-663; November/December 2012; the entire contents of each of which are incorporated by reference herein.
  • Heterodimerized bispecific antibodies are based on the natural IgG structure, wherein the two binding arms recognize different antigens.
  • IgG derived formats that enable defined antigen binding are generated by forced heavy chain heterodimerization, and can be combined with technologies that minimize light chain mispairing (e.g., common light chain). Forced heavy chain heterodimerization can be obtained using any number of technologies known in the art, e.g., knob- in-hole (KiH) or strand exchange engineered domains (SEED).
  • Knob-in-Hole as described in US5731116, US7476724 (the contents of each of which is incorporated herein by reference in their entirety), broadly involves: (1) mutating the CH3 domain of one or both antibodies to promote heterodimerization; and (2) combining the mutated antibodies under conditions that promote heterodimerization.
  • “Knobs” or “protuberances” are typically created by replacing a small amino acid in a parental antibody with a larger amino acid (e.g., T366Y or T366W); “Holes” or “cavities” are created by replacing a larger residue in a parental antibody with a smaller amino acid (e.g., Y407T, T366S, 11368A and/or Y407).
  • the multispecific antibody is an IgGl
  • the CH3 domain of the “knob” chain comprises a T366W mutation and the CH3 domain of the “hole” chain comprises mutations T366S, L368A, and Y407V.
  • the CH3 domain of the “knob” chain further comprises a Y349C mutation which forms an interchain disulfide bridge with either E356C or S354C in the CH3 domain of the “hole” chain.
  • the CH3 domain of the “knob” chain comprises R409D and K370E mutations and the CH3 domain of the “hole” chain comprises D399K and E357K.
  • the CH3 domain of the “knob” chain further comprises a T366W mutation and the CH3 domain of the “hole” chain further comprises mutations T366S, L368A, and Y407V.
  • Exemplary KiH mutations include S354C, T366W in the “knob” heavy chain and Y349C, T366S, L368A, Y407V in the “hole” heavy chain.
  • Other exemplary KiH mutations are provided in Table 10, with additional optional stabilizing Fc cysteine mutations.
  • SEED strand- exchange engineered domain
  • SEEDbody (Sb) fusion proteins consist of [IgGl hinge]-C(H)2-[SEED C(H)3], that may be genetically linked to one or more fusion partners (see e.g., Davis J H et al. Protein Eng Des Sel 2010; 23:195-202; and U.S. Pat. No. 8,871,912. The contents of each of which are incorporated by reference herein).
  • Duobody (Sb) fusion proteins consist of [IgGl hinge]-C(H)2-[SEED C(H)3], that may be genetically linked to one or more fusion partners (see e.g., Davis J H et al. Protein Eng Des Sel 2010; 23:195-202; and U.S. Pat. No. 8,871,912. The contents of each of which are incorporated by reference herein).
  • Duobody (Sb) fusion proteins consist of [IgGl hinge]-C(H)2-[SEED C(H)3], that may be genetically linked to one or more
  • Duobody Another heterodimeric Fc platform that supports bispecific antibody production is the “Duobody” platform.
  • DuoBody technology involves three basic steps to generate stable bispecific human IgGl antibodies in a post-production exchange reaction. In a first step, two IgGls, each containing single matched mutations in the third constant (CH3) domain, are produced separately using standard mammalian recombinant cell lines. Subsequently, these IgGl antibodies are purified according to standard processes for recovery and purification.
  • EP1870459 and WO 2009089004 describe strategies for favoring heterodimer formation upon co-expression of different antibody domains in a host cell.
  • one or more residues that make up the CH3-CH3 interface in both CH3 domains are replaced with a charged amino acid such that homodimer formation is electrostatically unfavorable and heterodimerization is electrostatically favorable.
  • Additional methods of making multispecific molecules using electrostatic interactions are described in the following references, the contents of each of which is incorporated by reference herein, include US20100015133, U.S. Pat. No. 8,592,562, U.S. Pat. No. 9,200,060, US20140154254A1, and U.S. Pat. No. 9,358,286.
  • CrossMab technology Another option to reduce light chain mispairing is the CrossMab technology which avoids non-specific L chain mispairing by exchanging CHI and CL domains in the Fab of one half of the bispecific antibody. Such crossover variants retain binding specificity and affinity, but make the two arms so different that L chain mispairing is prevented.
  • the CrossMab technology (as reviewed in Klein et al. Supra) involves domain swapping between heavy and light chains so as to promote the formation of the correct pairings. Briefly, to construct a bispecific IgG-like CrossMab antibody that could bind to two antigens by using two distinct light chain-heavy chain pairs, a two-step modification process is applied.
  • a dimerization interface is engineered into the C-terminus of each heavy chain using a heterodimerization approach, e.g., Knob-into-hole (KiH) technology, to ensure that only a heterodimer of two distinct heavy chains from one antibody (e.g., Antibody A) and a second antibody (e.g., Antibody B) is efficiently formed.
  • a heterodimerization approach e.g., Knob-into-hole (KiH) technology
  • CHI constant heavy 1
  • An exemplary method of enhancing the formation of a desired bispecific antibody from a mixture of monomers is by providing a common variable heavy chain to interact with each of the heteromeric variable light chain regions of the bispecific antibody.
  • Compositions and methods of producing bispecific antibodies with a common heavy chain are disclosed in, e.g., US20120184716, US20130317200, and US20160264685A1, the contents of each of which is incorporated by reference herein.
  • a multispecific antibody of the present disclosure that comprises a CD38 binding domain and an EpCAM binding domain has enhanced affinity for a cell that expresses CD38 and EpCAM compared to a bivalent antibody comprising only CD38 binding domains or a bivalent antibody comprising only EpC AM-binding domains.
  • a multispecific antibody of the present disclosure that comprises a CD38 binding domain and an EpCAM binding domain, binds to a cell that expresses on its surface CD38 and EpCAM, with at least 2-50 fold, 10-100 fold, 2-fold, 5-fold, 10-fold, 25-fold, 50-fold or 100-fold, or 20-50%, 50-100%, 20%, 25%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or 100% higher affinity (e.g., preferentially binds) compared to the binding affinity of an antibody that is bivalent to only one of CD38 or EpCAM, to the cell.
  • the multispecific antibody has 1.5, 2, 3, 4, 5, or 10-fold higher affinity for the cell with higher EpCAM expression than CD38 expression compared to a bivalent protein that binds to CD38.
  • a multispecific antibody provided herein binds to a target cell that expresses a higher level of EpCAM than CD38, on its surface.
  • the ratio of EpCAM to CD38 protein expression on the target cell surface is from about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 25, 50, 100, or greater than 200 as measured by flow cytometry.
  • the target cell is a cancer cell.
  • the cancer cell is an epithelial cancer cell.
  • the cancer cell is a carcinoma.
  • the carcinoma is an adenocarcinoma.
  • the target cell is a cancer cell is a pancreatic cancer cell.
  • the target cell is a cancer cell is a prostate cancer cell.
  • the multispecific antibody comprising a CD38 binding domain and an EpCAM binding domain has a higher immunologic activity against a CD38 expressing target cell compared to a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM binding domain.
  • the multispecific antibody has at least a 1.5, 2, 3, 4, 5, or 10-fold higher immunological activity than a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM-binding domain.
  • the multispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher immunological activity than a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM-binding domain.
  • Various immunological activities of a multispecific antibody can be measured using in vitro assays such as an ADCC assay, an ADCP assay, and a CDC assay.
  • ADCC Antibody-dependent cell-mediated cytotoxicity
  • Exemplary methods of measuring or determining the ADCC activity of an antibody in the methods described herein include the ADCC assay described in the Examples or the ADCC Reporter Assay commercially available from Promega (Catalog No. G7010 and G7018).
  • the multispecific antibody has a 1.5, 2, 3, 4, 5, or 10-fold higher ADCC activity than a bivalent antibody with only a CD38 binding domain (monospecific) or a bivalent antibody with only an EpCAM binding domain (monospecific). In some instances, the multispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher ADCC activity than a bivalent (monospecific) antibody with a CD38 binding domain or a bivalent (monospecific) antibody with only an EpCAM binding domain. ADCC activity can be determined using an in vitro cytotoxicity assay.
  • the multispecific antibody mediates ADCC more efficiently than a bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain, wherein the ADCC activity is determined using an in vitro cytotoxicity assay.
  • the multispecific antibody mediates at least about 5%, at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 75%, at least about 100% higher maximum cytotoxicity in an in vitro ADCC assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain.
  • the multispecific antibody mediates at least 2-fold, at least 3-fold, at least 4-fold, at least 5-fold or at least 10-fold higher maximum cytotoxicity in an in vitro ADCC assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain.
  • ADCP Antibody dependent cellular phagocytosis
  • Suitable assays for evaluating ADCP are known in the art and include, for example, the in vitro cytotoxicity assay with macrophages as effector cells and video microscopy as described by van Bij et al. in Journal of Hepatology Volume 53, Issue 4, October 2010, Pages 677-685.
  • a non-limiting example of an assay for determining the ADCP of CD38 expressing cells as mediated by a multispecific antibody described herein may comprise the steps of: (a) differentiating freshly isolated monocytes to macrophages with 5 days incubation in GM-CSF-containing medium; (b) plating about 100,000 macrophages per well in a multi -well plate in dendritic cell medium with GM-CSF; (c) adding 20,000 CD38-antibody opsonized CD38-expressing cells (e.g., Daudi cells), labelled with a generic fluorescent membrane dye, per well for 45 minutes at 37°C; (d) measuring the percentage of CD 14-positive, CD 19-negative, membrane-dye-positive macrophages on a flow cytometer.
  • a phagocytosis assay is used to measure the ADCP effect.
  • the multispecific antibody has a 1.5, 2, 3, 4, 5, or 10-fold higher ADCP activity than a bivalent antibody with only a CD38 binding domain (monospecific) or a bivalent antibody with only an EpCAM binding domain (monospecific).
  • the bispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher ADCP activity than a bivalent antibody with only a CD38 binding domain or a bivalent (monospecific) antibody with only an EpCAM binding domain.
  • ADCP activity can be determined using an in vitro FACS based phagocytosis assay.
  • the multispecific antibody mediates antibody dependent cellular phagocytosis (ADCP) more efficiently than a bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain, wherein the ADCP activity is determined using an in vitro FACS based phagocytosis assay.
  • the bispecific antibody mediates at least about 5%, at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 75%, at least about 100% higher maximum phagocytosis in an in vitro ADCP assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain.
  • Immunological activity can also be measured in a cell-line derived xenograft assay, wherein transformed cells are injected into mice and form a tumor.
  • a multispecific antibody with a CD38 binding domain and an EpCAM binding domain inhibits the growth of a tumor comprising CD38 expressing cells to a greater extent than a bivalent protein with the same CD38 binding domain or a bivalent protein with the same EpCAM-binding domain.
  • the multispecific antibody exhibits 1.5, 2, 3, 4, 5, or 10-fold higher inhibition of xenograft tumor growth compared to a bivalent protein with a CD38 binding domain or a bivalent protein with an EpCAM binding domain.
  • polypeptides described herein are produced using any method known in the art to be useful for the synthesis of polypeptides (e.g., antibodies), in particular, by chemical synthesis or by recombinant expression, and are preferably produced by recombinant expression techniques.
  • an antibody or its binding fragment thereof is expressed recombinantly, and the nucleic acid encoding the antibody or its binding fragment is assembled from chemically synthesized oligonucleotides (e.g., as described in Kutmeier et al., 1994, BioTechniques 17:242), which involves the synthesis of overlapping oligonucleotides containing portions of the sequence encoding the antibody, annealing and ligation of those oligonucleotides, and then amplification of the ligated oligonucleotides by PCR.
  • chemically synthesized oligonucleotides e.g., as described in Kutmeier et al., 1994, BioTechniques 17:242
  • a nucleic acid molecule encoding an antibody is optionally generated from a suitable source (e.g., an antibody cDNA library, or cDNA library generated from any tissue or cells expressing the immunoglobulin) by PCR amplification using synthetic primers hybridizable to the 3' and 5' ends of the sequence or by cloning using an oligonucleotide probe specific for the particular gene sequence.
  • a suitable source e.g., an antibody cDNA library, or cDNA library generated from any tissue or cells expressing the immunoglobulin
  • an antibody or its binding is optionally generated by immunizing an animal, such as a mouse, to generate polyclonal antibodies or, more preferably, by generating monoclonal antibodies, e.g., as described by Kohler and Milstein (1975, Nature 256:495-497) or, as described by Kozbor et al. (1983, Immunology Today 4:72) or Cole et al. (1985 in Monoclonal Antibodies and Cancer Therapy, Alan R. Liss, Inc., pp. 77-96).
  • a clone encoding at least the Fab portion of the antibody is optionally obtained by screening Fab expression libraries (e.g., as described in Huse et al., 1989, Science 246:1275-1281) for clones of Fab fragments that bind the specific antigen or by screening antibody libraries (See, e.g., Clackson et al., 1991, Nature 352:624; Hane et al., 1997 Proc. Natl. Acad. Sci. USA 94:4937).
  • chimeric antibodies techniques developed for the production of “chimeric antibodies” (Morrison et al., 1984, Proc. Natl. Acad. Sci. 81:851-855; Neuberger et al., 1984, Nature 312:604- 608; Takeda et al., 1985, Nature 314:452-454) by splicing genes from a mouse antibody molecule of appropriate antigen specificity together with genes from a human antibody molecule of appropriate biological activity are used.
  • a chimeric antibody is a molecule in which different portions are derived from different animal species, such as those having a variable region derived from a murine monoclonal antibody and a human immunoglobulin constant region.
  • single chain antibodies are adapted to produce single chain antibodies.
  • Single chain antibodies are formed by linking the heavy and light chain fragments of the Fv region via an amino acid bridge, resulting in a single chain polypeptide.
  • Techniques for the assembly of functional Fv fragments in E. coli are also optionally used (Skerra et al., 1988, Science 242:1038-1041).
  • an expression vector comprising the nucleotide sequence of an antibody or the nucleotide sequence of an antibody is transferred to a host cell by conventional techniques (e.g., electroporation, liposomal transfection, and calcium phosphate precipitation), and the transfected cells are then cultured by conventional techniques to produce the antibody.
  • the expression of the antibody is regulated by a constitutive, an inducible or a tissue, specific promoter.
  • host-expression vector systems is utilized to express an antibody, or its binding fragment described herein.
  • host-expression systems represent vehicles by which the coding sequences of the antibody is produced and subsequently purified, but also represent cells that are, when transformed or transfected with the appropriate nucleotide coding sequences, express an antibody or its binding fragment in situ.
  • host-expression systems represent vehicles by which the coding sequences of the antibody is produced and subsequently purified, but also represent cells that are, when transformed or transfected with the appropriate nucleotide coding sequences, express an antibody or its binding fragment in situ.
  • microorganisms such as bacteria (e.g., E. coli and B.
  • subtilis transformed with recombinant bacteriophage DNA, plasmid DNA or cosmid DNA expression vectors containing an antibody or its binding fragment coding sequences; yeast (e.g., Saccharomyces Pichia) transformed with recombinant yeast expression vectors containing an antibody or its binding fragment coding sequences; insect cell systems infected with recombinant virus expression vectors (e.g., baculovirus) containing an antibody or its binding fragment coding sequences; plant cell systems infected with recombinant virus expression vectors (e.g., cauliflower mosaic virus (CaMV) and tobacco mosaic virus (TMV)) or transformed with recombinant plasmid expression vectors (e.g., Ti plasmid) containing an antibody or its binding fragment coding sequences; or mammalian cell systems (e.g., COS, CHO, BH, 293, 293T, 3T3 cells) harboring recombinant expression constructs containing promoters derived from the
  • cell lines that stably express an antibody are optionally engineered.
  • host cells are transformed with DNA controlled by appropriate expression control elements (e.g., promoter, enhancer, sequences, transcription terminators, polyadenylation sites, etc.), and a selectable marker.
  • appropriate expression control elements e.g., promoter, enhancer, sequences, transcription terminators, polyadenylation sites, etc.
  • engineered cells are then allowed to grow for 1-2 days in an enriched media, and then are switched to a selective media.
  • the selectable marker in the recombinant plasmid confers resistance to the selection and allows cells to stably integrate the plasmid into their chromosomes and grow to form foci that in turn are cloned and expanded into cell lines.
  • This method can advantageously be used to engineer cell lines which express the antibody or its binding fragments.
  • a number of selection systems are used, including but not limited to the herpes simplex virus thymidine kinase (Wigler et ah, 1977, Cell 11:223), hypoxanthine-guanine phosphoribosyltransferase (Szybalska & Szybalski, 192, Proc. Natl. Acad. Sci.
  • dhfir which confers resistance to methotrexate (Wigler et ah, 1980, Proc. Natl. Acad. Sci. USA 77:357; O'Hare et ah, 1981, Proc. Natl. Acad. Sci.
  • the expression levels of an antibody are increased by vector amplification (for a review, see Bebbington and Hentschel, the use of vectors based on gene amplification for the expression of cloned genes in mammalian cells in DNA cloning, Vol. 3. (Academic Press, New York, 1987)).
  • vector amplification for a review, see Bebbington and Hentschel, the use of vectors based on gene amplification for the expression of cloned genes in mammalian cells in DNA cloning, Vol. 3. (Academic Press, New York, 1987)
  • a marker in the vector system expressing an antibody is amplifiable
  • an increase in the level of inhibitor present in culture of host cell will increase the number of copies of the marker gene. Since the amplified region is associated with the nucleotide sequence of the antibody, production of the antibody will also increase (Crouse et al., 1983, Mol. Cell Biol. 3:257).
  • any method known in the art for purification of an antibody is used, for example, by chromatography (e.g., ion exchange, affinity, particularly by affinity for the specific antigen after Protein A, and sizing column chromatography), centrifugation, differential solubility, or by any other standard technique for the purification of proteins.
  • chromatography e.g., ion exchange, affinity, particularly by affinity for the specific antigen after Protein A, and sizing column chromatography
  • centrifugation e.g., centrifugation, differential solubility, or by any other standard technique for the purification of proteins.
  • vectors include any suitable vectors derived from either a eukaryotic or prokaryotic sources.
  • vectors are obtained from bacteria (e.g. E. coli), insects, yeast (e.g. Pichia pastoris), algae, or mammalian sources.
  • Exemplary bacterial vectors include pACYC177, pASK75, pBAD vector series, pBADM vector series, pET vector series, pETM vector series, pGEX vector series, pHAT, pHAT2, pMal-c2, pMal-p2, pQE vector series, pRSET A, pRSET B, pRSET C, pTrcHis2 series, pZA31-Luc, pZE21-MCS-l, pFLAG ATS, pFLAG CTS, pFLAG MAC, pFLAG Shift- 12c, pTAC-MAT-1, pFLAG CTC, or pTAC-MAT-2.
  • Exemplary insect vectors include pFastBacl, pFastBac DUAL, pFastBac ET, pFastBac HTa, pFastBac HTb, pFastBac HTc, pFastBac M30a, pFastBact M30b, pFastBac, M30c, pVL1392, pVL1393, pVL1393 M10, pVL1393 Mi l, pVL1393 Ml 2, FLAG vectors such as pPolh-FLAGl or pPolh-MAT 2, or MAT vectors such as pPolh-MATl, or pPolh-MAT2.
  • yeast vectors include Gateway® pDESTTM 14 vector, Gateway® pDESTTM 15 vector, Gateway® pDESTTM 17 vector, Gateway® pDESTTM 24 vector, Gateway® pYES- DEST52 vector, pBAD-DEST49 Gateway® destination vector, pA0815 Pichia vector, pFLDl Pichi pastoris vector, pGAPZA,B, & C Pichia pastoris vector, pPIC3.5K Pichia vector, pPIC6 A, B, & C Pichia vector, pPIC9K Pichia vector, pTEFl/Zeo, pYES2 yeast vector, pYES2/CT yeast vector, pYES2/NT A, B, & C yeast vector, or pYES3/CT yeast vector.
  • Exemplary algae vectors include pChlamy-4 vector or MCS vector.
  • mammalian vectors include transient expression vectors or stable expression vectors.
  • Mammalian transient expression vectors may include pRK5, p3xFLAG-CMV 8, pFLAG- Myc-CMV 19, pFL AG-My c-CM V 23, pFLAG-CMV 2, pFLAG-CMV 6a,b,c, pFLAG-CMV 5.1, pFLAG-CMV 5a,b,c, p3xFLAG-CMV 7.1, pFLAG-CMV 20, p3xFLAG-Myc-CMV 24, pCMV- FLAG-MAT1, pCMV-FLAG-MAT2, pBICEP-CMV 3, or pBICEP-CMV 4.
  • Mammalian stable expression vector may include pFLAG-CMV 3, p3xFLAG-CMV 9, p3xFLAG-CMV 13, pFLAG- Myc-CMV 21, p3xFLAG-Myc-CMV25, pFLAG-CMV 4, p3xFLAG-CMV 10, p3xFLAG-CMV 14, pFLAG-Myc-CMV 22, p3xFLAG-Myc-CMV 26, pBICEP-CMV 1, or pBICEP-CMV 2.
  • a cell-free system is a mixture of cytoplasmic and/or nuclear components from a cell and is used for in vitro nucleic acid synthesis.
  • a cell-free system utilizes either prokaryotic cell components or eukaryotic cell components.
  • a nucleic acid synthesis is obtained in a cell-free system based on for example Drosophila cell, Xenopus egg, or HeLa cells.
  • Exemplary cell-free systems include, but are not limited to, E. coli S30 Extract system, E. coli T7 S30 system, or PURExpress®. Host Cells
  • a host cell includes any suitable cell such as a naturally derived cell or a genetically modified cell.
  • a host cell is a production host cell.
  • a host cell is a eukaryotic cell.
  • a host cell is a prokaryotic cell.
  • a eukaryotic cell includes fungi (e.g., yeast cells), animal cell or plant cell.
  • a prokaryotic cell is a bacterial cell. Examples of bacterial cell include gram-positive bacteria or gram negative bacteria. Sometimes the gram-negative bacteria is anaerobic, rod-shaped, or both.
  • gram-positive bacteria include Actinobacteria, Firmicutes or Tenericutes.
  • gram-negative bacteria include Aquificae, Deinococcus-Thermus, Fibrobacteres- Chlorobi/Bacteroidetes (FCB group), Fusobacteria, Gemmatimonadetes, Nitrospirae, Planctomycetes-Verrucomicrobia/ Chlamydiae (PVC group), Proteobacteria, Spirochaetes or Synergistetes.
  • bacteria can be Acidobacteria, Chloroflexi, Chrysiogenetes, Cyanobacteria, Deferribacteres, Dictyoglomi, Thermodesulfobacteria or Thermotogae.
  • a bacterial cell can be Escherichia coli, Clostridium botulinum, or Coli bacilli.
  • Exemplary prokaryotic host cells include, but are not limited to, BL21, MachlTM, DH10BTM, TOP10, DH5a, DHlOBacTM, OmniMaxTM, MegaXTM, DH12STM, INV110, TOP10F’, INVaF, TOP10/P3, ccdB Survival, PIR1, PIR2, Stbl2TM, Stbl3TM, or Stbl4TM.
  • animal cells include a cell from a vertebrate or from an invertebrate.
  • an animal cell includes a cell from a marine invertebrate, fish, insects, amphibian, reptile, or mammal.
  • a fungus cell includes a yeast cell, such as brewer’s yeast, baker’s yeast, or wine yeast.
  • Fungi include ascomycetes such as yeast, mold, filamentous fungi, basidiomycetes, or zygomycetes.
  • yeast includes Ascomycota or Basidiomycota.
  • Ascomycota includes Saccharomycotina (true yeasts, e.g. Saccharomyces cerevisiae (baker’s yeast)) or Taphrinomycotina (e.g. Schizosaccharomycetes (fission yeasts)).
  • Basidiomycota includes Agaricomycotina (e.g. Tremellomycetes) or Pucciniomycotina (e.g. Microbotryomycetes).
  • Exemplary yeast or filamentous fungi include, for example, the genus: Saccharomyces, Schizosaccharomyces, Candida, Pichia, Hansenula, Kluyveromyces, Zygosaccharomyces, Yarrowia, Trichosporon, Rhodosporidi, Aspergillus, Fusarium, or Trichoderma.
  • Exemplary yeast or filamentous fungi include, for example, the species: Saccharomyces cerevisiae, Schizosaccharomyces pombe, Candida utilis, Candida boidini, Candida albicans, Candida tropicalis, Candida stellatoidea, Candida glabrata, Candida krusei, Candida parapsilosis, Candida guilliermondii, Candida viswanathii, Candida lusitaniae, Rhodotorula mucilaginosa, Pichia metanolica, Pichia angusta, Pichia pastoris, Pichia anomala, Hansenula polymorpha, Kluyveromyces lactis, Zygosaccharomyces rouxii, Yarrowia lipolytica, Trichosporon pullulans, Rhodosporidium tom-Aspergillus niger, Aspergillus nidulans, Aspergillus awamori, Aspergillus oryza
  • Exemplary yeast host cells include, but are not limited to, Pichia pastoris yeast strains such as GS115, KM71H, SMD1168, SMD1168H, and X-33; and Saccharomyces cerevisiae yeast strain such as INVScl.
  • additional animal cells include cells obtained from a mollusk, arthropod, annelid or sponge.
  • an additional animal cell is a mammalian cell, e.g., from a primate, ape, equine, bovine, porcine, canine, feline or rodent.
  • a rodent includes mouse, rat, hamster, gerbil, hamster, chinchilla, fancy rat, or guinea pig.
  • Exemplary mammalian host cells include, but are not limited to, 293A cell line, 293FT cell line, 293F cells , 293 H cells, CHO DG44 cells, CHO-S cells, CHO-K1 cells, FUT8 KO CHOK1, Expi293FTM cells, Flp-InTM T-RExTM 293 cell line, Flp-InTM-293 cell line, Flp-InTM-3T3 cell line, Flp-InTM-BHK cell line, Flp-InTM-CHO cell line, Flp-InTM-CV-l cell line, Flp-InTM-Jurkat cell line, FreeStyleTM 293-F cells, FreeStyleTM CHO-S cells, GripTiteTM 293 MSR cell line, GS-CHO cell line, HepaRGTM cells, T-RExTM Jurkat cell line, Per.C6 cells, T-RExTM-293 cell line, T-RExTM-CHO cell line, and T-RExTM-HeLa cell line.
  • a mammalian host cell is a stable cell line, or a cell line that has incorporated a genetic material of interest into its own genome and has the capability to express the product of the genetic material after many generations of cell division.
  • a mammalian host cell is a transient cell line, or a cell line that has not incorporated a genetic material of interest into its own genome and does not have the capability to express the product of the genetic material after many generations of cell division.
  • Exemplary insect host cells include, but are not limited to, Drosophila S2 cells, Sf9 cells, Sf21 cells, High FiveTM cells, and expresSF+® cells.
  • plant cells include a cell from algae.
  • Exemplary insect cell lines include, but are not limited to, strains from Chlamydomonas reinhardtii 137c, or Synechococcus elongatus PPC 7942.
  • compositions comprising any of the bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM provided herein, e.g., for use in any of the below therapeutic methods.
  • a pharmaceutical composition comprises any of the bispecific antibodies provided herein and at least one pharmaceutically acceptable excipient.
  • a pharmaceutical composition comprises any of the bispecific antibodies provided herein and at least one additional therapeutic agent, e.g., as described below.
  • compositions that contains at least one bispecific antibody and optionally an additional active ingredient will be known to those of skill in the art in light of the present disclosure, as exemplified by Remington's Pharmaceutical Sciences, 18th Ed. Mack Printing Company, 1990, incorporated by reference herein.
  • any of the antibodies described herein comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM may be used in therapeutic methods.
  • bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before can be formulated, dosed, and administered in a fashion consistent with good medical practice.
  • Factors for consideration in this context include the particular disorder being treated, the particular mammal being treated, the clinical condition of the individual patient, the cause of the disorder, the site of delivery of the agent, the method of administration, the scheduling of administration, and other factors known to medical practitioners.
  • bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein for use as a medicament are provided.
  • bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein for use in treating a disease, in particular for use in the treatment of cancer, are provided.
  • bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM for use in a method of treatment are provided.
  • the invention provides bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as described herein for use in the treatment of a disease in an individual in need thereof.
  • the invention provides bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM for use in a method of treating an individual having a disease comprising administering to the individual a therapeutically effective amount of the bispecific antibody.
  • the disease to be treated is cancer.
  • the invention provides for the use of bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before in the manufacture or preparation of a medicament for the treatment of a disease in an individual in need thereof.
  • the medicament is for use in a method of treating a disease comprising administering to an individual having the disease a therapeutically effective amount of the medicament.
  • the disease to be treated is a proliferative disorder, particularly cancer.
  • the cancer is a solid tumor.
  • the cancer is an epithelial cancer.
  • the cancer is a carcinoma.
  • the cancer is an adenocarcinoma.
  • the cancer is prostate cancer.
  • the cancer is pancreatic cancer.
  • the cancer is a prostate carcinoma.
  • the cancer is a pancreatic carcinoma.
  • an article of manufacture containing materials useful for the treatment, prevention and/or diagnosis of the disorders described above comprises a container and a label or package insert on or associated with the container.
  • Suitable containers include, for example, bottles, vials, syringes, IV solution bags, etc.
  • the containers may be formed from a variety of materials such as glass or plastic.
  • the container holds a composition which is by itself or combined with another composition effective for treating, preventing and/or diagnosing the condition and may have a sterile access port (for example the container may be an intravenous solution bag or a vial having a stopper that is pierceable by a hypodermic injection needle).
  • At least one active agent in the composition is a bispecific antibody comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before.
  • the label or package insert indicates that the composition is used for treating the condition of choice.
  • the article of manufacture may comprise (a) a first container with a composition contained therein, wherein the composition comprises the bispecific antibody of the invention; and (b) a second container with a composition contained therein, wherein the composition comprises a further cytotoxic or otherwise therapeutic agent.
  • the article of manufacture in this embodiment of the invention may further comprise a package insert indicating that the compositions can be used to treat a particular condition.
  • the article of manufacture may further comprise a second (or third) container comprising a pharmaceutically-acceptable buffer, such as bacteriostatic water for injection (BWFI), phosphate-buffered saline, Ringer's solution and dextrose solution. It may further include other materials desirable from a commercial and user standpoint, including other buffers, diluents, filters, needles, and syringes.
  • BWFI bacteriostatic water for injection
  • phosphate-buffered saline such as bacteriostatic water for injection (BWFI), phosphate-buffered saline, Ringer's solution and dextrose solution.
  • BWFI bacteriostatic water for injection
  • phosphate-buffered saline such as bacteriostatic water for injection (BWFI), phosphate-buffered saline, Ringer's solution and dextrose solution.
  • BWFI bacteriostatic water for injection
  • Ringer's solution such as phosphate
  • Embodiment 1 A multispecific antibody that comprises a CD38 binding domain and an EpCAM binding domain.
  • Embodiment 2 The multispecific antibody of embodiment 1, wherein said multispecific antibody is bispecific, trispecific, or tetraspecific.
  • Embodiment 3 The multispecific antibody of embodiment 2, wherein said multispecific antibody is bispecific.
  • Embodiment 4 The multispecific antibody of any preceding embodiment, wherein said multispecific antibody is bivalent, trivalent, or tetravalent.
  • Embodiment 5 The multispecific antibody of embodiment 4, wherein said multispecific antibody is bivalent.
  • Embodiment 6 The multispecific antibody of any preceding claim, wherein said CD38 binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds CD38.
  • Embodiment 7 The multispecific antibody of embodiment 6, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
  • Embodiment 8 The multispecific antibody of embodiment 7, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of said IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
  • Embodiment 9 The multispecific antibody of embodiment 8, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl heavy chain; and said variable domain of said IgG light chain of said CD38 binding domain comprises a variable domain of an IgGl light chain.
  • Embodiment 10 The multispecific antibody of any one of embodiments 6-9, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a scFv or a Fab.
  • Embodiment 11 The multispecific antibody of any one of embodiments 7-10, wherein said variable domain of said IgG heavy chain (HC) of said CD38 binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein the HC-CDR1, the HC-CDR2, and the HC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1 : SEQ IDNO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ IDNO: 108; b.
  • CDRs complementarity determining regions
  • HC-CDR1 SEQ IDNO: 109; HC-CDR2: SEQ IDNO: 110; HC-CDR3 : SEQ IDNO: 111; and c.
  • HC-CDR1 SEQ IDNO: 112; HC-CDR2: SEQ IDNO: 113; HC-CDR3: SEQ IDNO: 108. [00395] Embodiment 12.
  • variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions LC (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 166; b.
  • LC-CDR1 SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; LC-CDR3: SEQ ID NO: 169; and c.
  • LC-CDR1 SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; LC-CDR3: SEQ ID NO: 171. [00396] Embodiment 13.
  • variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises CDRs: HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC-CDR3 sequences and said HC: HC- CDR1, HC-CDR2, and HC-CDR3 sequences are as set forth in any one of the following sets of sequences: a.
  • HC-CDR1 SEQ IDNO: 106; HC-CDR2: SEQ IDNO: 107; HC-CDR3 : SEQ IDNO: 108; LC-CDR1 : SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 166; b.
  • HC-CDR1 SEQ IDNO: 109; HC-CDR2: SEQ IDNO: 110; HC-CDR3 : SEQ IDNO: 111; LC-CDR1 : SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; and LC-CDR3 : SEQ ID NO: 169; and c.
  • HC-CDR1 SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3: SEQ ID NO: 108; LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 172.
  • Embodiment 14 The multispecific antibody of any one of embodiments 7-10, wherein said variable domain of an IgG heavy chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211-233.
  • Embodiment 15 The multispecific antibody of any one of embodiments 7-10 or 14, wherein said variable domain of an IgG light chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234-269.
  • Embodiment 16 Embodiment 16.
  • variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 233; or b.
  • variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 212; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234.
  • Embodiment 17 The multispecific antibody of any one of embodiments 1-19, wherein said EpCAM binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds EpCAM.
  • Embodiment 18 The multispecific antibody of embodiment 17, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
  • Embodiment 19 The multispecific antibody of embodiment 18, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
  • Embodiment 20 The multispecific antibody of embodiment 19, wherein said variable domain of an IgG heavy chain comprises of said EpCAM binding domain a variable domain of an IgGl heavy chain; and said variable domain of an IgG light chain of said EpCAM binding domain comprises a variable domain of an IgGl light chain.
  • Embodiment 21 The multispecific antibody of any one of embodiments 17-20, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a scFv or a Fab.
  • Embodiment 22 The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG heavy chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein said HC-CDR1, the HC-CDR2, and the HC-CDR3 of said variable heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; and b.
  • CDRs complementarity determining regions
  • Embodiment 23 The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG light chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC- CDR2, and the LC-CDR3 of the heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a.
  • CDRs complementarity determining regions
  • LC-CDR1 SEQ ID NO: 41; LC-CDR2: SEQ ID NO: 42; LC-CDR3 : SEQ ID NO: 43; and b.
  • LC-CDR1 SEQ ID NO: 44; LC-CDR2: SEQ ID NO: 45; LC-CDR3 : SEQ ID NO: 46.
  • variable domain of an IgG light chain (LC) of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said EpCAM binding domain comprises complementarity determining regions HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC- CD3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences comprise sequences with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to sequences as set forth in any one of the following sets of sequences: a.
  • HC-CDR1 SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; LC- CDR1: SEQ ID NO: 43; LC-CDR2: SEQ ID NO: 44; LC-CDR3 : SEQ ID NO: 45; and b.
  • HC-CDR1 SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6; LC- CDR1: SEQ ID NO: 46; LC-CDR2: SEQ ID NO: 47; LC-CDR3 : SEQ ID NO: 48.
  • Embodiment 25 The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG heavy chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 76-91, 260-161.
  • Embodiment 26 The multispecific antibody of any one of embodiments 18-22, wherein said variable domain of an IgG light chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 92-105, 262-268.
  • Embodiment 27 The multispecific antibody of any one of embodiments 18-21, wherein EpCAM binding domain comprises a. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 76; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 92; or b.
  • variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 77; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 93.
  • Embodiment 28 The multispecific antibody of any one of embodiments 1-27, further comprising an IgG hinge region, or a portion thereof.
  • Embodiment 29 The multispecific antibody of embodiment 28, wherein said IgG hinge region is C terminal to said CD38 binding domain or said EpCAM binding domain and N terminal to an Fc region.
  • Embodiment 30 The multispecific antibody of any one of embodiments 1-29, further comprising an Fc region.
  • Embodiment 31 The multispecific antibody of embodiment 29 or 30, wherein said Fc region comprises an IgG CH2 domain and an IgG CH3 domain.
  • Embodiment 32 The multispecific antibody of any one of embodiments 29-31, wherein said Fc region comprises a heterodimeric Fc region.
  • Embodiment 33 The multispecific antibody of any one of embodiments 29-32, wherein said Fc region comprises at least one amino acid modification that increases the half-life of the multispecific antibody.
  • Embodiment 34 The multispecific antibody of any one of embodiments 29-33, wherein said Fc region comprises at least one amino acid modification that modulates its interaction with an Fc receptor.
  • Embodiment 35 The multispecific antibody of embodiment 29-34, wherein said Fc region comprises at least one amino acid modification that increases binding of said Fc region to an Fc receptor.
  • Embodiment 36 The multispecific antibody of any one of embodiments 29-35, wherein said Fc region comprises at least one amino acid modification that decreases glycosylation of the Fc region.
  • Embodiment 37 The multispecific antibody of embodiment 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region is an amino acid substitution, deletion, or addition, or a combination thereof.
  • Embodiment 38 The multispecific antibody of embodiment 37, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comrpises an amino acid substitution.
  • Embodiment 39 The multispecific antibody of embodiment 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution at a position corresponding to position N297 of human IgGl, wherein the numbering is according to the EU index of Kabat.
  • Embodiment 40 The multispecific antibody of any one of embodiments 29-39, wherein said Fc region is afucosylated.
  • Embodiment 41 The multispecific antibody of any one of embodiments 29-40, wherein said Fc region comprises at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC).
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 42 The multispecific antibody of embodiment 41, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC) is an amino acid substitution, deletion, or addition, or a combination thereof.
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 43 The multispecific antibody of embodiment 42, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC) comprises an amino acid substitution.
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 44 The multispecific antibody of embodiment 43, wherein said Fc region comprises at least one mutation that increases antibody-dependent cellular cytotoxicity (ADCC), wherein said at least one mutation that increases ADCC comprises an amino acid substitution at positions corresponding to positions S239, 1332, and A330 of human IgGl, wherein the amino acid numbering is according to the EU index according to Kabat et al.
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 45 The multispecific antibody of embodiment 44, wherein said amino acid substitutions are S239D, I332E, and A330L, wherein the amino acid numbering is according to the EU index according to Kabat et al.
  • Embodiment 46 The multispecific antibody of any one of embodiments 32-45, comprising said heterodimeric Fc region, wherein said heterodimeric Fc region comprises a knob chain and a hole chain, forming a knob-in-hole (KIH) structure.
  • Embodiment 47 The multispecific antibody of embodiment 46, wherein said knob chain comprises an amino acid substitution at a position corresponding to T366 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 48 The multispecific antibody of embodiment 47, wherein said T366 substitution comprises a T336W mutation, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 49 The multispecific antibody of any one of embodiments 46-48, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, or Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 50 The multispecific antibody of embodiment 49, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, and Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 51 The multispecific antibody of embodiment 49, wherein said T366, L368, or Y407 amino acid substitutions comprise a T366S, L368A, or Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 52 The multispecific antibody of embodiment 50, wherein said T366, L368, and Y407 amino acid substitutions comprises a T366S, L368A, and Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
  • Embodiment 53 The multispecific antibody of any preceding claim, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cell relative to a monospecific control antibody that comprises said CD38 binding domain but lacks an EpCAM binding domain, as determined by surface plasmon resonance.
  • Embodiment 54 The multispecific antibody of any preceding claim, wherein said multispecific antibody binds to a target cell that expresses CD38 and EpCAM on the cell surface with a higher affinity relative to that of a monospecific control antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain, as determined by surface plasmon resonance.
  • Embodiment 55 Embodiment 55.
  • the multispecific antibody of any preceding claim wherein said multispecific antibody induces enhanced antibody-dependent cellular cytotoxicity (ADCC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to ADCC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 56 The multispecific antibody of embodiment 55, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more ADCC mediated lysis than said control monospecific antibody.
  • Embodiment 57 The multispecific antibody of any preceding claim, wherein said multispecific antibody induces enhanced complement-dependent cytotoxicity (CDC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to CDC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
  • CDC complement-dependent cytotoxicity
  • Embodiment 58 The multispecific antibody of embodiment 57, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more CDC mediated lysis than said control monospecific antibody.
  • Embodiment 59 The multispecific antibody of any one of embodiments 53-58, wherein said target cell or population of target cells express a lower level of CD38 relative to EpCAM on the surface of said target cell.
  • Embodiment 60 The multispecific antibody of any one of embodiments 53-59, wherein the ratio of EpCAM to CD38 on the cell surface of said target cell or population of target cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
  • Embodiment 61 The multispecific antibody of any one of embodiments 53-60, wherein the ratio of EpCAM to CD38 on the surface of said target cell or population of target cells is greater than or equal to the ratio of EpCAM to CD38 on the surface of a DU145 cell or a CFPAC-1 cell.
  • Embodiment 62 The multispecific antibody of any one of embodiments 53-60, wherein said target cell or population of target cells comprises a cancer cell.
  • Embodiment 63 The multispecific antibody of embodiment 62, wherein said cancer is an epithelial cell.
  • Embodiment 64 The multispecific antibody of any preceding claim, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cancer cell than for CD38 expressed on the surface of a comparable non-cancer cell, as determined by surface plasmon resonance.
  • Embodiment 65 The multispecific antibody of embodiment 63, wherein EpCAM is expressed on the surface of said target cancer cell.
  • Embodiment 66 The multispecific antibody of embodiment 63 or 64, wherein EpCAM is not expressed on the surface of said comparable non-cancer cell.
  • Embodiment 67 The multispecific antibody of any one of embodiments 63-65, wherein said cancer cell is an epithelial cell.
  • Embodiment 68 A nucleic acid molecule encoding the multispecific antibody of any one of embodiments 1-67.
  • Embodiment 69 A vector comprising the nucleic acid molecule of embodiment 68.
  • Embodiment 70 A pharmaceutical composition comprising the multispecific antibody of any one of embodiments 1-67.
  • Embodiment 71 The pharmaceutical composition of embodiment 70, further comprising a pharmaceutically acceptable carrier, an excipient, or any combinations thereof.
  • Embodiment 72 A method of treating a subject having cancer, said method comprising: administering to said subject the multispecific antibody of any one of embodiments 1-67 or the pharmaceutical composition of embodiment 70 or 71.
  • Embodiment 73 The method of embodiment 72, wherein said cancer comprises cancer cells that express CD38 and EpCAM.
  • Embodiment 74 The method of embodiment 73, wherein the ratio of EpCAM to CD38 on the surface of said cancer cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
  • Embodiment 75 The method of embodiment 73 or 74, wherein said cancer cells that express CD38 and EpCAM are lysed.
  • Embodiment 76 The method of any one of embodiments 72-75, wherein said multispecific antibody induces antibody-dependent cellular cytotoxicity (ADCC) mediated killing of said cancer cells that express CD38 and EpCAM.
  • ADCC antibody-dependent cellular cytotoxicity
  • Embodiment 77 The method of any one of embodiments 72-76, wherein said multispecific antibody induces complement-dependent cytotoxicity (CDC) mediated killing of said cancer cells that express CD38 and EpCAM.
  • CDC complement-dependent cytotoxicity
  • Embodiment 78 The method of any one of embodiments 72-77, wherein the cancer is a solid tumor.
  • Embodiment 79 The method of embodiment 78, wherein said cancer is a carcinoma.
  • Embodiment 80 The method of embodiment 79, wherein said carcinoma is an adenocarcinoma.
  • Embodiment 81 The method of any one of embodiments 72-80, wherein said cancer is prostate cancer or pancreatic cancer.
  • Embodiment 82 The method of any one of embodiments 72-81, comprising administering to said subject an anti-cancer agent.
  • Embodiment 83 The method of embodiment 82, wherein said anti-cancer agent is a chemotherapeutic agent or a biologic agent.
  • VH and VL sequences were compared to a library of known human germline sequences from human VH genes and human VLkappa genes (IMGT® the international ImMunoGeneTics information system® www.imgt.org).
  • the acceptor human germline was chosen from those closest in sequence to the parental antibody.
  • human germline IGHV3-23 was chosen as the acceptor sequence.
  • human germline IGKV1-39 was chosen as the acceptor sequence.
  • Alteration of human germline framework (i.e., non-CDR residues in VH and VL) positions to corresponding parental murine sequence might be required to optimize binding of the humanized antibody.
  • a list of humanized Mab2 variants were generated and evaluated for their bindings to EpCAM. Their sequences are shown in the Table 3 and Table 4.
  • EXAMPLE 2 Generation and characterization of bispecific anti-CD38/anti-EpCAM antibodies
  • the bispecific antibody format was constructed with one CD38 binding site and one EpCAM binding site in a three chain format.
  • One antigen binding site is in a Fab format and the other antigen binding site is in a scFv format.
  • the bispecific antibody incorporated knob-in-hole mutations in their Fc domains to form an asymmetric structure (FIG. 1).
  • the anti-CD38 BMK1 benchmark antibody has an amino acid sequence based on Daratumumab.
  • the anti-EpCAM BMK2 benchmark antibody has an amino acid sequence based on the anti-EpCAM clone VB6-845 (Vicinium).
  • ADCC antibody-dependent cellular cytotoxicity
  • target cells were washed once with balanced salt solution or culture medium and cell numbers were adjusted to lxlO 6 cells/ml.
  • 2 pL of BATDA fluorescence enhancing ligand Perkin Elmer, Cat# Cl 36- 100 was then added to each mL of cells and incubated for 20 min at 37 °C in a cell incubator. After incubation, cells were centrifuged, culture medium was aspirated. The labeled cells were washed 4 times with PBS. After the final wash, cells were re-suspended in culture medium and adjusted to 5 x 10 4 cell /ml.
  • 50 ul/well effector cells were added to each well of assay plate at different ET ratio.
  • Set up controls target spontaneous (target cell+100 pL medium); target maximum (target cell+100 pL medium+10 pL lysis buffer); background (100 pL the labeled target cell supernatant and 100 pL dilution medium).
  • the plates were incubated in a humidified 5 % CO2 atmosphere at 37 °C for 2 hours. At the end of incubation, 10 pL of Lysis Buffer (Perkin Elmer, Cat# 4005-0010) was added to the maximum release well.
  • the plates were centrifuged for 5 min at 500g. 20 pL of the supernatant from each well was transferred to a flat- bottom detection plate.
  • the ADCC activity of bispecific anti-CD38/EpCAM antibodies was determined on human prostate cancer cell DU145 (FIG. 2 and FIG. 4) and human pancreas cell CFPAC-1 (FIG. 3).
  • the DU145 and CFPAC-1 cell lines express very low level of CD38 on cell surface.
  • the anti-CD38 antibodies showed no activity on both cells (FIGS. 2-4).
  • the CD38/EpCAM bispecific antibodies showed higher ADCC activity than the monovalent anti-EpCAM antibodies (FIGS. 2-4).

Abstract

Disclosed herein are multispecific antibodies comprising a CD38 binding domain and an EpCAM binding domain. Further provided herein are methods of treating cancer comprising administering to a subject having cancer a pharmaceutical composition comprising a multispecific antibody comprising a CD38 binding domain and an EpCAM binding domain.

Description

MULTISPECIFIC ANTIBODIES TARGETING CD38 AND EPCAM AND USES
THEREOF
CROSS-REFERENCE
[0001] This application claims the benefit of International Patent Application No. PCT/CN2020/088213 filed April 30, 2020, which is entirely incorporated herein by reference for all purposes.
SEQUENCE LISTING
[0001.1] The instant application contains a Sequence Listing which has been submitted electronically in ASCII format and is hereby incorporated by reference in its entirety. Said ASCII copy, created on April 29, 2021, is named 55429-727_602_SL.txt and is 185,511 bytes in size.
SUMMARY
[0002] The present disclosure provides multispecific antibodies (such as, bispecific antibodies) comprising a CD38-binding domain and an EpCAM binding domain.
[0003] In one aspect, provided herein are multispecific antibodies that comprises a CD38 binding domain and an EpCAM binding domain.
[0004] In some embodiments, said multispecific antibody is bispecific, trispecific, or tetraspecific. In some embodiments, said multispecific antibody is bispecific. In some embodiments, said multispecific antibody is bivalent, trivalent, or tetravalent. In some embodiments, said multispecific antibody is bivalent.
[0005] In some embodiments, said CD38 binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds CD38. In some embodiments, said antibody, or functional fragment or functional variant thereof, comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain. In some embodiments, said variable domain of an IgG heavy chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain. In some embodiments, said variable domain of an IgG heavy chain comprises a variable domain of an IgGl heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl light chain. In some embodiments, said antibody, or functional fragment or functional variant thereof, comprises a scFv or a Fab.
[0006] In some embodiments, said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC- CDR3, wherein the HC-CDR1, the HC-CDR2, and the HC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: HC-CDR1: SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; HC-CDR1: SEQ ID NO: 109; HC-CDR2: SEQ ID NO: 110; HC-CDR3: SEQ ID NO: 111; and HC-CDR1: SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3: SEQ ID NO: 108.
[0007] In some embodiments, said variable domain of an IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions LC (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 166; LC-CDR1 : SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; LC-CDR3: SEQ ID NO: 169; and LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 171.
[0008] In some embodiments, variable domain of an IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, and said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises CDRs: HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC- CDR3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences are as set forth in any one of the following sets of sequences: HC-CDR1: SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 166; HC-CDR1: SEQ ID NO: 109; HC-CDR2: SEQ ID NO: 110; HC- CDR3: SEQ ID NO: 111; LC-CDR1: SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; andLC-CDR3: SEQ ID NO: 169; and HC-CDRl: SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3: SEQ ID NO: 108; LC-CDR1: SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 171.
[0009] In some embodiments, said variable domain of an IgG heavy chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211-233. In some embodiments, said variable domain of an IgG light chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234-269.
[0010] In some embodiments, said CD38 binding domain comprises a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234; or a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 212; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 235.
[0011] In some embodiments, said EpCAM binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds EpCAM. In some embodiments, said antibody, or functional fragment or functional variant thereof, comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain. In some embodiments, said variable domain of an IgG heavy chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain. In some embodiments, said variable domain of an IgG heavy chain comprises a variable domain of an IgGl heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl light chain. In some embodiments, said antibody, or functional fragment or functional variant thereof, comprises a scFv or a Fab.
[0012] In some embodiments, said variable domain of an IgG heavy chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC- CDR3, wherein said HC-CDR1, the HC-CDR2, and the HC-CDR3 of said variable heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; and HC-CDR1: SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6.
[0013] In some embodiments, said variable domain of an IgG light chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of the heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: LC-CDR1: SEQ ID NO: 41; LC-CDR2: SEQ ID NO: 42; LC-CDR3 : SEQ ID NO: 43; and LC-CDR1: SEQ ID NO: 44; LC-CDR2: SEQ ID NO: 45; LC-CDR3 : SEQ ID NO: 46.
[0014] In some embodiments, variable domain of an IgG light chain (LC) of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC- CDR3, and said variable domain of an IgG heavy chain (HC) of said EpCAM binding domain comprises complementarity determining regions HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC-CD3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences comprise sequences with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to sequences as set forth in any one of the following sets of sequences: HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; LC-CDR1: SEQ ID NO: 43; LC- CDR2: SEQ ID NO: 44; LC-CDR3 : SEQ ID NO: 45; and HC-CDR1: SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6; LC-CDR1: SEQ ID NO: 46; LC-CDR2: SEQ ID NO: 47; LC-CDR3 : SEQ ID NO: 48.
[0015] In some embodiments, said variable domain of an IgG heavy chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 76-91, 260-261. In some embodiments, said variable domain of an IgG light chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 92-105, 262-268. [0016] In some embodiments, EpCAM binding domain comprises a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 76; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 92; or a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 77; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 93.
[0017] In some embodiments, said multispecific antibody further comprises an IgG hinge region, or a portion thereof.
[0018] In some embodiments, said multispecific antibody further comprises an Fc region. In some embodiments, said Fc region comprises an IgG CH2 domain and an IgG CH3 domain. In some embodiments, said IgG hinge region is C terminal to said CD38 binding domain or said EpCAM binding domain and N terminal to said Fc region. In some embodiments, said Fc region comprises a heterodimeric Fc region.
[0019] The multispecific antibody of any one of claims 28-32, wherein said Fc region comprises at least one amino acid modification that increases the half-life of the multispecific antibody. In some embodiments, said Fc region comprises at least one amino acid modification that modulates its interaction with an Fc receptor. In some embodiments, said Fc region comprises at least one amino acid modification that increases binding of said Fc region to an Fc receptor.
[0020] In some embodiments, said Fc region comprises at least one amino acid modification that decreases glycosylation of the Fc region. In some embodiments, said modification is an amino acid substitution, deletion, or addition. In some embodiments, said modification is an amino acid substitution. In some embodiments, said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution at a position corresponding to position N297 of human IgGl, wherein the numbering is according to the EU index of Rabat. In some embodiments, said Fc region is afucosylated. [0021] In some embodiments, said Fc region comprises at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC). In some embodiments, said modification is an amino acid substitution, deletion, or addition. In some embodiments, said modification is an amino acid substitution. In some embodiments, said Fc region comprises at least one mutation that increases antibody-dependent cellular cytotoxicity (ADCC), wherein said at least one mutation that increases ADCC comprises an amino acid substitution at positions corresponding to positions S239, 1332, and A330 of human IgGl, wherein the amino acid numbering is according to the EU index according to Kabat et al. In some embodiments, said amino acid substitutions are S239D, I332E, and A330L, wherein the amino acid numbering is according to the EU index according to Kabat et al.
[0022] In some embodiments, said heterodimeric Fc region, wherein said heterodimeric Fc region comprises a knob chain and a hole chain, forming a knob-in-hole (KIH) structure. In some embodiments, said knob chain comprises an amino acid substitution at a position corresponding to T366 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said T366 substitution comprises a T336W mutation, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, or Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, and Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said T366, L368, or Y407 amino acid substitutions comprise a T366S, L368A, or Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. In some embodiments, said T366, L368, and Y407 amino acid substitutions comprises a T366S, L368A, and Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[0023] In some embodiments, said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cell relative to a monospecific control antibody that comprises said CD38 binding domain but lacks an EpCAM binding domain, as determined by surface plasmon resonance. [0024] In some embodiments, said multispecific antibody binds to a target cell that expresses CD38 and EpCAM on the cell surface with a higher affinity relative to that of a monospecific control antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain, as determined by surface plasmon resonance. [0025] In some embodiments, said multispecific antibody induces enhanced antibody-dependent cellular cytotoxicity (ADCC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to ADCC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain. In some embodiments, said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more ADCC mediated lysis than said control monospecific antibody.
[0026] In some embodiments, said multispecific antibody induces enhanced complement-dependent cytotoxicity (CDC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to CDC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain. In some embodiments, said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more CDC mediated lysis than said control monospecific antibody.
[0027] In some embodiments, said target cell or population of target cells express a lower level of CD38 relative to EpCAM on the surface of said target cell. In some embodiments, the ratio of EpCAM to CD38 on the cell surface of said target cell or population of target cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
[0028] In some embodiments, the ratio of EpCAM to CD38 on the surface of said target cell or population of target cells is greater than or equal to the ratio of EpCAM to CD38 on the surface of a DU145 cell or a CFPAC-1 cell.
[0029] In some embodiments, said target cell or population of target cells comprises a cancer cell. In some embodiments, said cancer is an epithelial cell.
[0030] In some embodiments, said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cancer cell than for CD38 expressed on the surface of a comparable non cancer cell, as determined by surface plasmon resonance. In some embodiments, EpCAM is expressed on the surface of said target cancer cell. In some embodiments, EpCAM is not expressed on the surface of said comparable non-cancer cell. In some embodiments, said cancer cell is an epithelial cell.
[0031] In one aspect, provided herein is a nucleic acid molecule encoding a multispecific antibody described herein.
[0032] In one aspect provided herein is a vector comprising a nucleic acid molecule described herein. [0033] In one aspect, provided herein is a pharmaceutical composition comprising a multispecific antibody described herein. In some embodiments, said pharmaceutical composition comprises pharmaceutically acceptable carrier, an excipient, or any combinations thereof.
[0034] In one aspect, provided herein is a method of treating a subject having cancer, said method comprising: administering to said subject a multispecific antibody described herein or a pharmaceutical composition described herein. In some embodiments, said cancer comprises cancer cells that express CD38 and EpCAM. In some embodiments, the ratio of EpCAM to CD38 on the surface of said cancer cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
[0035] In some embodiments, said cancer cells that express CD38 and EpCAM are lysed. In some embodiments, said multispecific antibody induces antibody-dependent cellular cytotoxicity (ADCC) mediated killing of said cancer cells that express CD38 and EpCAM. In some embodiments, said multispecific antibody induces complement-dependent cytotoxicity (CDC) mediated killing of said cancer cells that express CD38 and EpCAM.
[0036] In some embodiments, the cancer is a solid tumor. In some embodiments, said cancer is a carcinoma. In some embodiments, said carcinoma is an adenocarcinoma. In some embodiments, said cancer is prostate cancer or pancreatic cancer. In some embodiments, said method further comprises administering to said subject an anti-cancer agent. In some embodiments, said anti-cancer agent is a chemotherapeutic agent or a biologic agent.
BRIEF DESCRIPTION OF THE FIGURES
[0037] FIG. 1 is a graphic depiction of a bispecific antibody described herein, which binds CD38 and EpCAM. In the depicted embodiment, one antigen binding domain (e.g., CD38) can be a Fab and the other antigen binding domain can be a scFv (e.g., EpCAM), and vice versa, i.e. CD38 antigen binding domain is a scFv and the EpCAM binding domain is a Fab. In the depicted embodiment, the CH3 regions of the constant heavy chain polypeptides are engineered to form a knob-in-hole structure to mediate formation of the bispecific antibody.
[0038] FIG. 2 is a line graph showing the results of an ADCC assay on epithelial DU145 cells (human prostate cancer cell line). DU145 cells express low levels of CD38 and high levels of EpCAM. The graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis). The data shows that two bispecific antibodies that bind to EpCAM and CD38 exhibits higher ADCC activity on DU145 cells compared to a bivalent monospecific anti-EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti-EpCAM antibody, and an isotype control human IgGl antibody. [0039] FIG. 3 is a line graph showing the results of an ADCC assay on epithelial CFPAC-1 cells (human pancreatic adenocarcinoma cell line). CFPAC-1 cells express low levels of CD38 and high levels of EpCAM. The graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis). The data shows that two bispecific antibodies that bind to EpCAM and CD38 exhibits higher ADCC activity on DU145 cells compared to a bivalent monospecific anti- EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti -EpCAM antibody, and an isotype control human IgGl antibody.
[0040] FIG. 4 is a line graph showing the results of an ADCC assay on DU 145 cells (human prostate cancer cell line). DE1145 cells express low levels of CD38 and high levels of EpCAM. The graph plots percent cytotoxicity (y axis) versus the concentration of the indicated antibody (x axis). The data shows that the bispecific antibody that binds to EpCAM and CD38 exhibits higher ADCC activity on DU 145 cells compared to a bivalent monospecific anti-EpCAM antibody, a bivalent monospecific anti-CD38 antibody, a monovalent anti-EpCAM antibody, and an isotype control human IgGl antibody.
DETAILED DESCRIPTION
[0041] Antibodies that bind to CD38 are useful for the treatment of cancers that express CD38. Anti- CD38 antibodies are thought to kill cancer cells by various mechanisms including antibody- dependent cell-mediated cytotoxicity (ADCC) and complement dependent cytotoxicity (CDC). One such antibody, daratumumab, is approved for the treatment of adults with multiple myeloma. However, reduced or low expression of CD38 on cancer cells can limit the efficacy of anti-CD38 antibodies. Therefore, there is a need for new treatments that can target CD38 expressing cancers, while overcoming the limitations of current anti-CD38 immunotherapies.
[0042] CD38 (also known as ADP-Ribosyl Cyclase 1) is an ectoenzyme that functions as both an enzymatic protein as well as a receptor expressed on the cell surface. While the role of CD38 in hematological malignancies has been extensively studied, the impact of CD38 expression within solid tumors is largely a new field of study. Anti-CD38 antibodies used in the treatment of hematological malignancies are thought to kill cancer cells by various mechanisms including antibody-dependent cell-mediated cytotoxicity (ADCC) and/or complement dependent cytotoxicity (CDC). However, low or reduced expression of CD38 on cancer cells can limit the efficacy of anti- CD38 antibodies in the treatment of solid tumors.
[0043] Epithelial cell adhesion molecule (EpCAM) (also known as CD236) is a type I transmembrane glycoprotein which functions as a homophilic Ca2+-independent cell-cell adhesion molecule. EpCAM is highly expressed in epithelial cancers; and while EpCAM is localized to the basolateral membrane in the normal epithelial tissue, it is uniformly membranous over-expressed in epithelial cancers.
[0044] The present disclosure is based, at least in part, on the discovery that multispecific antibodies comprising a CD38 binding domain and an EpCAM binding domain can overcome the problems of monospecific bivalent anti-CD38 antibodies by providing an increased local concentration of the anti-CD38 antibody to relevant cell populations (EpCAMT (high)/CD38+ (low)); thereby increasing the potency and ADCC mediated killing of target cancer cells.
Definitions
[0045] Unless defined otherwise, all technical and scientific terms used herein have the same meaning as is commonly understood by one of skill in the art to which the claimed subject matter belongs. It is to be understood that the foregoing general description and the following detailed description are exemplary and explanatory only and are not restrictive of any subject matter claimed. The section headings used herein are for organizational purposes only and are not to be construed as limiting the subject matter described. In this application, the use of the singular includes the plural unless specifically stated otherwise. It is noted that, as used in the specification and the appended claims, the singular forms “a,” “an” and “the” include plural referents unless the context clearly dictates otherwise. In this application, the use of “or” means “and/or” unless stated otherwise. Furthermore, use of the term “including” as well as other forms, such as “include”, “includes,” and “included,” is not limiting.
[0046] As used herein, ranges and amounts can be expressed as “about” a particular value or range. About also includes the exact amount. Hence “about 5 pL” means “about 5 pL” and also “5 pL.” Generally, the term “about” includes an amount that would be expected to be within experimental error.
[0047] The terms “antibody” and “immunoglobulin” are used interchangeably herein and are used in the broadest sense and covers fully assembled antibodies, antibody fragments that can bind antigen, for example, Fab, F(ab’)2, Fv, single chain antibodies (scFv), diabodies, antibody chimeras, hybrid antibodies, bispecific antibodies, and the like.
[0048] The terms “monoclonal antibody” and “mAb” are used interchangeably herein and refer to an antibody obtained from a substantially homogeneous population of antibodies, i.e., the individual antibodies of the population are identical except for possible naturally occurring mutations that may be present in minor amounts.
[0049] The terms “native antibodies” and “native immunoglobulins” are heterotetrameric glycoproteins of about 150,000 Daltons, composed of two identical light (L) chains and two identical heavy (H) chains. Each light chain is linked to a heavy chain by one covalent disulfide bond, while the number of disulfide linkages varies among the heavy chains of different immunoglobulin isotypes. Each heavy and light chain also has regularly spaced intrachain disulfide bridges. Each heavy chain has at one end a variable domain (VH) followed by a number of constant domains. Each light chain has a variable domain at one end (VL) and a constant domain at its other end; the constant domain of the light chain is aligned with the first constant domain of the heavy chain, and the light chain variable domain is aligned with the variable domain of the heavy chain. Particular amino acid residues are believed to form an interface between the light and heavy-chain variable domains. [0050] The term “hypervariable region,” as used herein, refers to the amino acid residues of an antibody that are responsible for antigen-binding. The hypervariable region comprises amino acid residues from a “complementarily determining region” or “CDR” (i.e., residues 24-34 (LI), 50-56 (L2), and 89-97 (L3) in the light-chain variable domain and 31-35 (HI), 50-65 (H2), and 95-102 (H3) in the heavy-chain variable domain; Kabat et al. (1991) Sequences of Proteins of Immunological Interest Fifth Edition, U.S. Department of Health and Human Services, NIH Publication No. 91- 3242 (referred to herein as “Kabat et al”)and/or those residues from a “hypervariable loop” (i.e., residues 26-32 (LI), 50-52 (L2), and 91-96 (L3) in the light-chain variable domain and (HI), 53-55 (H2), and 96-101 (13) in the heavy chain variable domain; Chothia and Lesk, (1987) J. Mol. Biol., 196:901-917). “Framework” or “FR” residues are those variable domain residues other than the hypervariable region residues, as herein deemed.
[0051] In some instances, the CDRs of an antibody is determined according to (i) the Kabat numbering system Kabat et al. (1991) Sequences of Proteins of Immunological Interest Fifth Edition, U.S. Department of Health and Human Services, NIH Publication No. 91-3242; or (ii) the Chothia numbering scheme, which will be referred to herein as the "Chothia CDRs" (see, e.g., Chothia and Lesk, 1987, J. Mol. Biol., 196:901-917; Al-Lazikani et al., 1997, J. Mol. Biol., 273 :927-948; Chothia et ak, 1992, J. Mol. Biol., 227:799-817; Tramontano A et al. , 1990, J. Mol. Biol. 215(1): 175-82; and U.S. Patent No. 7,709,226); or (iii) the ImMunoGeneTics (IMGT) numbering system, for example, as described in Lefranc, M.-P., 1999, The Immunologist, 7: 132-136 and Lefranc, M - P. et al, 1999, Nucleic Acids Res., 27:209-212 ("IMGT CDRs"); or (iv) MacCallum et al, 1996, J. Mol. Biol., 262:732-745. See also, e.g., Martin, A., "Protein Sequence and Structure Analysis of Antibody Variable Domains," in Antibody Engineering, Kontermann and Diibel, eds., Chapter 31, pp. 422-439, Springer- Verlag, Berlin (2001).
[0052] With respect to the Kabat numbering system, CDRs within an antibody heavy chain molecule are typically present at amino acid positions 31 to 35, which optionally can include one or two additional amino acids, following 35 (referred to in the Kabat numbering scheme as 35 A and 35B) (CDR1), amino acid positions 50 to 65 (CDR2), and amino acid positions 95 to 102 (CDR3). Using the Rabat numbering system, CDRs within an antibody light chain molecule are typically present at amino acid positions 24 to 34 (CDR1), amino acid positions 50 to 56 (CDR2), and amino acid positions 89 to 97 (CDR3). As is well known to those of skill in the art, using the Rabat numbering system, the actual linear amino acid sequence of the antibody variable domain can contain fewer or additional amino acids due to a shortening or lengthening of a FR and/or CDR and, as such, an amino acid’s Rabat number is not necessarily the same as its linear amino acid number.
[0053] The term “antibody fragment” as used herein refers to a molecule that comprises a portion of an intact antibody, preferably the antigen-binding or variable region of the intact antibody. Examples of antibody fragments include Fab, Fab, F(ab’)2, Fv fragments, and single chain fragment variable (scFv); diabodies; linear antibodies (Zapata et al. (1995) Protein Eng. 10:1057-1062); single-chain antibody molecules; and multispecific antibodies formed from antibody fragments. Papain digestion of antibodies produces two identical antigen-binding fragments, called “Fab” fragments, each with a single antigen-binding site, and a residual “Fc” fragment, whose name reflects its ability to crystallize readily. Pepsin treatment yields an F(ab’)2 fragment that has two antigen-combining sites and is still capable of cross-linking antigen.
[0054] The term “Fv” as used herein refer to the minimum antibody fragment that contains a complete antigen recognition and binding site. This region consists of a dimer of one heavy- and one light-chain variable domain in tight, non-covalent association. It is in this configuration that the three CDRs of each variable domain interact to define an antigen-binding site on the surface of the VH- VL dimer. Collectively, the six CDRs confer antigen-binding specificity to the antibody. However, even a single variable domain (or half of an Fv comprising only three CDRs specific for an antigen) has the ability to recognize and bind antigen, although at a lower affinity than the entire binding site. [0055] The term “Fab” refers to a protein that contains the constant domain of the light chain and the first constant domain (CHI) of the heavy chain. Fab fragments differ from Fab’ fragments by the addition of a few residues at the carboxy terminus of the heavy chain CHI domain including one or more cysteines from the antibody hinge region. Fab’-SH is the designation herein for Fab’ in which the cysteine residue(s) of the constant domains bear a free thiol group. Fab’ fragments are produced by reducing the F(ab’)2 fragment’s heavy chain disulfide bridge. Other chemical couplings of antibody fragments are also known.
[0056] A “single-chain variable fragment (scFv)” is a fusion protein of the variable regions of the heavy (VH) and light chains (VL) of an antibody, connected with a short linker peptide of ten to about 25 amino acids. The linker is usually rich in glycine for flexibility, as well as serine or threonine for solubility, and can either connect the N-terminus of the VH with the C-terminus of the VL, or vice versa. This protein retains the specificity of the original antibody, despite removal of the constant regions and the introduction of the linker. scFv antibodies are, e.g. described in Houston, J. S., Methods in Enzymol. 203 (1991) 46-96). In addition, antibody fragments comprise single chain polypeptides having the characteristics of a VH domain, namely being able to assemble together with a VL domain, or of a VL domain, namely being able to assemble together with a VH domain to a functional antigen binding site and thereby providing the antigen binding property of full length antibodies.
[0057] As used herein, the term “antigen-binding site” refers to the part of the antigen binding molecule that specifically binds to an antigenic determinant. More particularly, the term “antigen binding site” refers the part of an antibody that comprises the area which specifically binds to and is complementary to part or all of an antigen. Where an antigen is large, an antigen binding molecule may only bind to a particular part of the antigen, which part is termed an epitope. An antigen-binding site may be provided by, for example, one or more variable domains (also called variable regions). Preferably, an antigen-binding site comprises an antibody light chain variable region (VL) and an antibody heavy chain variable region (VH).
[0058] By “specific binding” is meant that the binding is selective for the antigen and can be discriminated from unwanted or non-specific interactions. The ability of an antigen binding molecule to bind to a specific antigen can be measured either through an enzyme-linked immunosorbent assay (ELISA) or other techniques familiar to one of skill in the art, e.g. Surface Plasmon Resonance (SPR) technique (analyzed on a BIAcore instrument) (Liljeblad et ah, Glyco J 17, 323-329 (2000)), and traditional binding assays (Heeley, Endocr Res 28, 217-229 (2002)). In one embodiment, the extent of binding of an antigen binding molecule to an unrelated protein is less than about 10% of the binding of the antigen binding molecule to the antigen as measured, e.g. by SPR. In certain embodiments, an molecule that binds to the antigen has a dissociation constant (Kd) of <1 mM, <100 nM, <10 nM, <1 nM, <0.1 nM, <0.01 nM, or <0.001 nM (e.g. 10-7 M or less, e.g. from 10-7M to 10-13 M, e.g. from 10-9 M to 10-13 M).
[0059] Depending on the amino acid sequence of the constant domain of their heavy chains, immunoglobulins can be assigned to different classes. There are five major classes of human immunoglobulins: IgA, IgD, IgE, IgG, IgM, and IgY , and several of these may be further divided into subclasses (isotypes), e.g., IgGl, IgG2, IgG3, IgG4, IgAl, and IgA2. The heavy-chain constant domains that correspond to the different classes of immunoglobulins are called alpha, delta, epsilon, gamma, and mu, respectively. The subunit structures and three-dimensional configurations of different classes of immunoglobulins are well known. Different isotypes have different effector functions. For example, human IgGl and IgG3 isotypes have ADCC (antibody dependent cell- mediated cytotoxicity) activity. The light chains of antibodies (immunoglobulins) from any vertebrate species can be assigned to one of two clearly distinct types, called kappa (K) and lambda (l), based on the amino acid sequences of their constant domains.
[0060] The term “chimeric antibody,” as used herein refers to an antibody in which a portion of the heavy and/or light chain is derived from a particular source (e.g., protein) or species, while the remainder of the heavy and/or light chain is derived from a different source (e.g., protein) or species. [0061] The term “recombinant human antibody,” as used herein, is intended to include all human antibodies that are prepared, expressed, created or isolated by recombinant means, such as antibodies isolated from a host cell such as a NSO or CHO cell or from an animal (e.g. a mouse) that is transgenic for human immunoglobulin genes or antibodies expressed using a recombinant expression vector transfected into a host cell. Such recombinant human antibodies have variable and constant regions in a rearranged form. In some cases, the recombinant human antibodies have been subjected to in vivo somatic hypermutation. Thus, the amino acid sequences of the VH and VL regions of the recombinant antibodies are sequences that, while derived from and related to human germ line VH and VL sequences, may not naturally exist within the human antibody germ line repertoire in vivo. [0062] The term “valent” as used herein denotes the presence of a specified number of binding sites in an antigen binding molecule. As such, the terms “bivalent”, “tetravalent”, and “hexavalent” denote the presence of two binding sites, four binding sites, and six binding sites, respectively, in an antigen binding molecule. The bispecific antibodies according to the invention are at least “bivalent” and may be “trivalent” or “multivalent” (e.g. “tetravalent” or “hexavalent”). In a particular aspect, the antibodies of the present invention have two or more binding sites and are bispecific. That is, the antibodies may be bispecific even in cases where there are more than two binding sites (i.e. that the antibody is trivalent or multivalent). In particular, the invention relates to bispecific bivalent antibodies, having one binding site for each antigen they specifically bind to.
[0063] The term “monospecific” antibody as used herein denotes an antibody that has one or more binding sites each of which bind to the same epitope of the same antigen. The term “bispecific” means that the antibody is able to specifically bind to at least two distinct antigenic determinants, for example two binding sites each formed by a pair of an antibody heavy chain variable domain (VH) and an antibody light chain variable domain (VL) binding to different antigens or to different epitopes on the same antigen. Such a bispecific antibody is an 1+1 format. Other bispecific antibody formats are 2+1 formats (comprising two binding sites for a first antigen or epitope and one binding site for a second antigen or epitope) or 2+2 formats (comprising two binding sites for a first antigen or epitope and two binding sites for a second antigen or epitope). Typically, a bispecific antibody comprises two antigen binding sites, each of which is specific for a different antigenic determinant. [0064] The terms “individual(s)”, “subject(s)” and “patient(s)” are used interchangeably herein and refer to any mammal. In some embodiments, the mammal is a human. In some embodiments, the mammal is a non-human. None of the terms require or are limited to situations characterized by the supervision (e.g. constant or intermittent) of a health care worker (e.g. a doctor, a registered nurse, a nurse practitioner, a physician’s assistant, an orderly or a hospice worker).
[0065] As used herein, the term “percent (%) amino acid sequence identity” with respect to a sequence is defined as the percentage of amino acid residues in a candidate sequence that are identical with the amino acid residues in the specific sequence, after aligning the sequences and introducing gaps, if necessary, to achieve the maximum percent sequence identity, and not considering any conservative substitutions as part of the sequence identity. Alignment for purposes of determining percent amino acid sequence identity can be achieved in various ways that are within the skill in the art, for instance, using publicly available computer software such as EMBOSS MATCHER, EMBOSS WATER, EMBOSS STRETCHER, EMBOSS NEEDLE, EMBOSS LALIGN, BLAST, BLAST-2, ALIGN or Megalign (DNASTAR) software. Those skilled in the art can determine appropriate parameters for measuring alignment, including any algorithms needed to achieve maximal alignment over the full length of the sequences being compared.
[0066] The terms “cancer” and “tumor” are used interchangeably herein, encompass all types of oncogenic processes and/or cancerous growths. In embodiments, cancer includes primary tumors as well as metastatic tissues or malignantly transformed cells, tissues, or organs. In embodiments, cancer encompasses all histopathologies and stages, e.g., stages of invasiveness/severity, of a cancer. In embodiments, cancer includes relapsed and/or resistant cancer.
[0067] As used herein, “treatment” (and grammatical variations thereof such as “treat” or “treating”) refers to clinical intervention in an attempt to alter the natural course of the individual being treated, and can be performed either for prophylaxis or during the course of clinical pathology. Desirable effects of treatment include, but are not limited to, preventing occurrence or recurrence of disease, alleviation of symptoms, diminishment of any direct or indirect pathological consequences of the disease, preventing metastasis, decreasing the rate of disease progression, amelioration or palliation of the disease state, and remission or improved prognosis. In some embodiments, the molecules of the invention are used to delay development of a disease or to slow the progression of a disease. [0068] As used herein, the terms “Antibody-dependent cellular cytotoxicity” and “ADCC” refer to a cell-mediated reaction in which non-specific cytotoxic cells (e.g., Natural Killer (NK) cells, neutrophils, and macrophages) recognize bound antibody on a target cell and subsequently cause lysis of the target cell. EpCAM Binding Domains
[0069] In some embodiments, disclosed herein is a multispecific antibody that comprises an anti- EpCAM binding domain. In some embodiments, the EpCAM binding domain comprises an antibody or antigen binding fragment or variant thereof. In some embodiments, antibody or antigen binding fragment or variant thereof is a monoclonal antibody. In some embodiments, antibody or antigen binding fragment or variant thereof is a human antibody, a murine antibody, a humanized antibody, or a chimeric antibody. In some embodiments, the EpCAM binding domain comprises a monovalent Fab, a bivalent Fab’2, a single-chain variable fragment (scFv), or functional fragment or variant thereof. In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable heavy chain domain (VH). In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable light chain domain (VL). In some embodiments, the EpCAM binding domain comprises a VH and a VL.
[0070] In some embodiments, the multispecific antibodies, and binding fragments thereof, are derived from non-human (e.g. rabbit or mouse) antibodies. In some instances, the humanized form of the non-human antibody contains a minimal non-human sequence to maintain original antigenic specificity. In some cases, the humanized antibodies are human immunoglobulins (acceptor antibody), wherein the CDRs of the acceptor antibody are replaced by residues of the CDRs of a non human immunoglobulin (donor antibody), such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity. In some instances, one or more framework region (FR) residues of the human immunoglobulin are replaced by corresponding non human residues of the donor antibody.
Complementarity Determining Regions (CDRs)
[0071] In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable heavy chain domain (VH) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 1 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0072] In some embodiments, the EpCAM binding domain comprises an immunoglobulin variable light chain domain (VL) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 2 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [0073] In some embodiments, the EpCAM binding domain comprises a VH that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 1 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 2 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0074] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 1, a CDR2 of SEQ ID NO: 2, and a CDR3 of SEQ ID NO: 3. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 4, a CDR2 of SEQ ID NO: 5, and a CDR3 of SEQ ID NO: 6. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 7, a CDR2 of SEQ ID NO: 8, and a CDR3 of SEQ ID NO: 9. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 10, a CDR2 of SEQ ID NO: 11, and a CDR3 of SEQ ID NO: 12. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 13, a CDR2 of SEQ ID NO: 14, and a CDR3 of SEQ ID NO: 15. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 16, a CDR2 of SEQ ID NO: 17, and a CDR3 of SEQ ID NO: 18. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 19, a CDR2 of SEQ ID NO: 20, and a CDR3 of SEQ ID NO: 21. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 22, a CDR2 of SEQ ID NO: 23, and a CDR3 of SEQ ID NO: 24. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 25, a CDR2 of SEQ ID NO: 26, and a CDR3 of SEQ ID NO: 27. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 28, a CDR2 of SEQ ID NO: 29, and a CDR3 of SEQ ID NO: 30. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 32, and a CDR3 of SEQ ID NO: 33. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 34, a CDR2 of SEQ ID NO: 35, and a CDR3 of SEQ ID NO: 36. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 37, and a CDR3 of SEQ ID NO: 33. In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 38, a CDR2 of SEQ ID NO: 39, and a CDR3 of SEQ ID NO: 40. [0075] In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 41, a CDR2 of SEQ ID NO: 42, and a CDR3 of SEQ ID NO: 43. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 44, a CDR2 of SEQ ID NO: 45, and a CDR3 of SEQ ID NO: 46. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 47, a CDR2 of SEQ ID NO: 48, and a CDR3 of SEQ ID NO: 48. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 50, a CDR2 of SEQ ID NO: 51, and a CDR3 of SEQ ID NO: 52. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 53, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 56, a CDR2 of SEQ ID NO: 57, and a CDR3 of SEQ ID NO: 58. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 59, a CDR2 of SEQ ID NO: 60, and a CDR3 of SEQ ID NO: 61. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 62, a CDR2 of SEQ ID NO: 63, and a CDR3 of SEQ ID NO: 64. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 65, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 66, a CDR2 of SEQ ID NO: 67, and a CDR3 of SEQ ID NO: 68. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 72, a CDR2 of SEQ ID NO: 73, and a CDR3 of SEQ ID NO: 74. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71. In some embodiments, the EpCAM binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 75, a CDR2 of SEQ ID NO: 76, and a CDR3 of SEQ ID NO: 77.
[0076] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 1, a CDR2 of SEQ ID NO: 2, and a CDR3 of SEQ ID NO: 3; and a VL that comprises a CDR1 of SEQ ID NO: 41, a CDR2 of SEQ ID NO: 42, and a CDR3 of SEQ ID NO: 43.
[0077] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 4, a CDR2 of SEQ ID NO: 5, and a CDR3 of SEQ ID NO: 6; and a VL that comprises a CDR1 of SEQ ID NO: 44, a CDR2 of SEQ ID NO: 45, and a CDR3 of SEQ ID NO: 46.
[0078] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 7, a CDR2 of SEQ ID NO: 8, and a CDR3 of SEQ ID NO: 9, and a VL that comprises a CDR1 of SEQ ID NO: 47, a CDR2 of SEQ ID NO: 48, and a CDR3 of SEQ ID NO: 49. [0079] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 10, a CDR2 of SEQ ID NO: 11, and a CDR3 of SEQ ID NO: 12, and a VL that comprises a CDR1 of SEQ ID NO: 50, a CDR2 of SEQ ID NO: 51, and a CDR3 of SEQ ID NO: 52. [0080] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 13, a CDR2 of SEQ ID NO: 14, and a CDR3 of SEQ ID NO: 15, and a VL that comprises a CDR1 of SEQ ID NO: 53, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55. [0081] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 16, a CDR2 of SEQ ID NO: 17, and a CDR3 of SEQ ID NO: 18, and a VL that comprises a CDR1 of SEQ ID NO: 56, a CDR2 of SEQ ID NO: 57, and a CDR3 of SEQ ID NO: 58. [0082] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 19, a CDR2 of SEQ ID NO: 20, and a CDR3 of SEQ ID NO: 21, and a VL that comprises a CDR1 of SEQ ID NO: 59, a CDR2 of SEQ ID NO: 60, and a CDR3 of SEQ ID NO: 61. [0083] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 22, a CDR2 of SEQ ID NO: 23, and a CDR3 of SEQ ID NO: 24, and a VL that comprises a CDR1 of SEQ ID NO: 62, a CDR2 of SEQ ID NO: 63, and a CDR3 of SEQ ID NO: 64. [0084] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 25, a CDR2 of SEQ ID NO: 26, and a CDR3 of SEQ ID NO: 27, and a VL that comprises a CDR1 of SEQ ID NO: 65, a CDR2 of SEQ ID NO: 54, and a CDR3 of SEQ ID NO: 55. [0085] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 28, a CDR2 of SEQ ID NO: 29, and a CDR3 of SEQ ID NO: 30, and a VL that comprises a CDR1 of SEQ ID NO: 66, a CDR2 of SEQ ID NO: 67, and a CDR3 of SEQ ID NO: 68. [0086] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 32, and a CDR3 of SEQ ID NO: 33, and a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71. [0087] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 34, a CDR2 of SEQ ID NO: 35, and a CDR3 of SEQ ID NO: 36, and a VL that comprises a CDR1 of SEQ ID NO: 72, a CDR2 of SEQ ID NO: 73, and a CDR3 of SEQ ID NO: 74. [0088] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 31, a CDR2 of SEQ ID NO: 37, and a CDR3 of SEQ ID NO: 33, and a VL that comprises a CDR1 of SEQ ID NO: 69, a CDR2 of SEQ ID NO: 70, and a CDR3 of SEQ ID NO: 71. [0089] In some embodiments, the EpCAM binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 38, a CDR2 of SEQ ID NO:391, and a CDR3 of SEQ ID NO: 40, and a VL that comprises a CDR1 of SEQ ID NO: 75, a CDR2 of SEQ ID NO: 76, and a CDR3 of SEQ ID NO: 77.
Table 1. VH CDR amino acid sequences of anti-EpCAM antibodies as defined by Kabat et al.
Figure imgf000021_0001
Table 2. VL CDR amino acid sequences of anti-EpCAM antibodies as defined by Kabat et al.
Figure imgf000021_0002
[0090] In some embodiments, a CDR described herein comprises one, two, or three amino acid modifications. In some embodiments, said modification is a substitution, addition, or deletion. In some embodiments, a CDR described herein comprises one, two, or three conservative amino acid substitutions. In some embodiments, the one, two, or three amino acid modifications does not substantially modify binding to human EpCAM. In some embodiments, the one, two, or three amino acid modifications modifies binding to human EpCAM. In some embodiments, a VH-CDR3 and/or VL-CDR3 comprises an amino acid substitution that modifies binding to human EpCAM, immunogenicity, or some other feature. In some embodiments, the amino acid substitution is an alanine (A). Variable Heavy and Variable Light Regions
[0091] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 3 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0092] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence disclosed in Table 4 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0093] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 3 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence disclosed in Table 4 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0094] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0095] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 79, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0096] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 80, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0097] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 81, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [0098] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 82, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[0099] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 83, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00100] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 84, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00101] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 85, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00102] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 86, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00103] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 87, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00104] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 88, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00105] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 89, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00106] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 90, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00107] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 91, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00108] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00109] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00110] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00111] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 93, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00112] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 94, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00113] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 95, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00114] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 96, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00115] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 97, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00116] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 98, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00117] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 99, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00118] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 100, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00119] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 101, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00120] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 102, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00121] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 103, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00122] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 104, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00123] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 105, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00124] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 262, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00125] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 263, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00126] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 264, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00127] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 265, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00128] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00129] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00130] In some embodiments, the EpCAM binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00131] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00132] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 79, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 93, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00133] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 80, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 94, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00134] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 81, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 95, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00135] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 82, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 96, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00136] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 83, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 97, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00137] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 84, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 98, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00138] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 85, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 99, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00139] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 86, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 100, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00140] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 87, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 101, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00141] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 88, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 102, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00142] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 89, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 103, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00143] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 90, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 104, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00144] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 91, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 105, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00145] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 262, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00146] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 263, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00147] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 264, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00148] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 260, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 265, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00149] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00150] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00151] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00152] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 261, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00153] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 266, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00154] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 267, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00155] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 92, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00156] In some embodiments, the EpCAM binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 78, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 268, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
Table 3. Amino acid sequence of the anti-EpCAM variable heavy chain binding domains. CDRs according to Kabat et al. are underlined.
Figure imgf000032_0001
Figure imgf000033_0001
Table 4. Amino acid sequence of the anti-EpCAM variable light chain binding domains. CDRs according to Kabat et al. are underlined.
Figure imgf000034_0001
Figure imgf000035_0001
CD38 Binding Domains
[00157] In some embodiments, disclosed herein is a multispecific antibody that comprises a CD38 binding domain. In some embodiments, the CD38 binding domain comprises an antibody or antigen binding fragment or variant thereof. In some embodiments, antibody or antigen binding fragment or variant thereof is a monoclonal antibody. In some embodiments, antibody or antigen binding fragment or variant thereof is a human antibody, a murine antibody, a humanized antibody, or a chimeric antibody. In some embodiments, the CD38 binding domain comprises a monovalent Fab, a bivalent Fab’2, a single-chain variable fragment (scFv), or functional fragment or variant thereof. In some embodiments, the CD38 binding domain comprises an immunoglobulin variable heavy chain domain (VH). In some embodiments, the CD38 binding domain comprises an immunoglobulin variable light chain domain (VL). In some embodiments, the CD38 binding domain comprises a VH and a VL.
[00158] In some embodiments, the multispecific antibodies, and binding fragments thereof, are derived from non-human (e.g. rabbit or mouse) antibodies. In some instances, the humanized form of the non-human antibody contains a minimal non-human sequence to maintain original antigenic specificity. In some cases, the humanized antibodies are human immunoglobulins (acceptor antibody), wherein the CDRs of the acceptor antibody are replaced by residues of the CDRs of a non human immunoglobulin (donor antibody), such as rat, rabbit, or mouse donor having the desired specificity, affinity, avidity, binding kinetics, and/or capacity. In some instances, one or more framework region (FR) residues of the human immunoglobulin are replaced by corresponding non human residues of the donor antibody.
Complementarity Determining Regions (CDRs)
[00159] In some embodiments, the CD38 binding domain comprises an immunoglobulin variable heavy chain domain (VH) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 5 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00160] In some embodiments, the CD38 binding domain comprises an immunoglobulin variable light chain domain (VL) that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 6 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00161] In some embodiments, the CD38 binding domain comprises a VH that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 5 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises at least one, two, or three complementarity determining regions (CDRs) disclosed in Table 6 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00162] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108. [00163] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 109, a CDR2 of SEQ ID NO: 110, and a CDR3 of SEQ ID NO: 111.
[00164] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 113, and a CDR3 of SEQ ID NO: 108.
[00165] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 114, a CDR2 of SEQ ID NO: 115, and a CDR3 of SEQ ID NO: 116.
[00166] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 117, a CDR2 of SEQ ID NO: 118, and a CDR3 of SEQ ID NO: 119.
[00167] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 120, a CDR2 of SEQ ID NO: 121, and a CDR3 of SEQ ID NO: 122.
[00168] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 123, a CDR2 of SEQ ID NO: 124, and a CDR3 of SEQ ID NO: 125.
[00169] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 126, a CDR2 of SEQ ID NO: 127, and a CDR3 of SEQ ID NO: 128.
[00170] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 129, a CDR2 of SEQ ID NO: 130, and a CDR3 of SEQ ID NO: 131.
[00171] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 132, a CDR2 of SEQ ID NO: 133, and a CDR3 of SEQ ID NO: 134.
[00172] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 135, a CDR2 of SEQ ID NO: 136, and a CDR3 of SEQ ID NO: 137.
[00173] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 138, a CDR2 of SEQ ID NO: 139, and a CDR3 of SEQ ID NO: 140.
[00174] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 141, a CDR2 of SEQ ID NO: 142, and a CDR3 of SEQ ID NO: 143.
[00175] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 144, a CDR2 of SEQ ID NO: 145, and a CDR3 of SEQ ID NO: 146.
[00176] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 147, a CDR2 of SEQ ID NO: 148, and a CDR3 of SEQ ID NO: 149.
[00177] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 150, a CDR2 of SEQ ID NO: 151, and a CDR3 of SEQ ID NO: 152.
[00178] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 153, a CDR2 of SEQ ID NO: 154, and a CDR3 of SEQ ID NO: 155.
[00179] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 156, a CDR2 of SEQ ID NO: 157, and a CDR3 of SEQ ID NO: 158. [00180] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 159, and a CDR3 of SEQ ID NO: 108.
[00181] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 283, and a CDR3 of SEQ ID NO: 108 [00182] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 160, a CDR2 of SEQ ID NO: 161, and a CDR3 of SEQ ID NO: 108.
[00183] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 162, a CDR2 of SEQ ID NO: 163, and a CDR3 of SEQ ID NO: 108.
[00184] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108.
[00185] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 166.
[00186] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 167, a CDR2 of SEQ ID NO: 168, and a CDR3 of SEQ ID NO: 169.
[00187] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 170, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
[00188] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 172, a CDR2 of SEQ ID NO: 173, and a CDR3 of SEQ ID NO: 174.
[00189] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 175, a CDR2 of SEQ ID NO: 176, and a CDR3 of SEQ ID NO: 177.
[00190] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 178, a CDR2 of SEQ ID NO: 179, and a CDR3 of SEQ ID NO: 180.
[00191] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 183.
[00192] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 184, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 186.
[00193] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 187, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 189.
[00194] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 191.
[00195] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 192.
[00196] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 193, a CDR2 of SEQ ID NO: 194, and a CDR3 of SEQ ID NO: 195. [00197] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 196, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 197.
[00198] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 198, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 199.
[00199] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 200, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 201.
[00200] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 202, a CDR2 of SEQ ID NO: 203, and a CDR3 of SEQ ID NO: 204.
[00201] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 205.
[00202] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 206, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 207.
[00203] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 208, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
[00204] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
[00205] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 209.
[00206] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 166.
[00207] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 171.
[00208] In some embodiments, the CD38 binding domain comprises a VL that comprises a CDR1 of SEQ ID NO: 164, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO: 210.
[00209] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 106, a CDR2 of SEQ ID NO: 107, and a CDR3 of SEQ ID NO: 108; and a VL that comprises a CDR1 of SEQ ID NO: 176, a CDR2 of SEQ ID NO: 177, and a CDR3 of SEQ ID NO: 178.
[00210] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 109, a CDR2 of SEQ ID NO: 110, and a CDR3 of SEQ ID NO: 111; and a VL that comprises a CDR1 of SEQ ID NO: 179, a CDR2 of SEQ ID NO: 180, and a CDR3 of SEQ ID NO: 181.
[00211] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 112, a CDR2 of SEQ ID NO: 113, and a CDR3 of SEQ ID NO: 108, and a VL that comprises a CDR1 of SEQ ID NO: 182, a CDR2 of SEQ ID NO: 177, and a CDR3 of SEQ ID NO: 183.
[00212] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 114, a CDR2 of SEQ ID NO: 115, and a CDR3 of SEQ ID NO: 116, and a VL that comprises a CDR1 of SEQ ID NO: 172, a CDR2 of SEQ ID NO: 173, and a CDR3 of SEQ ID NO: 174.
[00213] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 117, a CDR2 of SEQ ID NO: 118, and a CDR3 of SEQ ID NO: 119, and a VL that comprises a CDR1 of SEQ ID NO: 175, a CDR2 of SEQ ID NO: 176, and a CDR3 of SEQ ID NO: 177.
[00214] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 120, a CDR2 of SEQ ID NO: 121, and a CDR3 of SEQ ID NO: 122, and a VL that comprises a CDR1 of SEQ ID NO: 178, a CDR2 of SEQ ID NO: 179, and a CDR3 of SEQ ID NO: 180.
[00215] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 123, a CDR2 of SEQ ID NO: 124, and a CDR3 of SEQ ID NO: 125, and a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 183.
[00216] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 126, a CDR2 of SEQ ID NO: 127, and a CDR3 of SEQ ID NO: 128, and a VL that comprises a CDR1 of SEQ ID NO: 184, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 186.
[00217] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 129, a CDR2 of SEQ ID NO: 130, and a CDR3 of SEQ ID NO: 131, and a VL that comprises a CDR1 of SEQ ID NO: 187, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 189.
[00218] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 132, a CDR2 of SEQ ID NO: 133, and a CDR3 of SEQ ID NO: 134, and a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO:
191.
[00219] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 135, a CDR2 of SEQ ID NO: 136, and a CDR3 of SEQ ID NO: 137, and a VL that comprises a CDR1 of SEQ ID NO: 190, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO:
192. [00220] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 138, a CDR2 of SEQ ID NO: 139, and a CDR3 of SEQ ID NO: 140, and a VL that comprises a CDR1 of SEQ ID NO: 193, a CDR2 of SEQ ID NO: 194, and a CDR3 of SEQ ID NO: 195.
[00221] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 141, a CDR2 of SEQ ID NO: 142, and a CDR3 of SEQ ID NO: 143, and a VL that comprises a CDR1 of SEQ ID NO: 196, a CDR2 of SEQ ID NO: 182, and a CDR3 of SEQ ID NO: 197.
[00222] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 144, a CDR2 of SEQ ID NO: 145, and a CDR3 of SEQ ID NO: 146, and a VL that comprises a CDR1 of SEQ ID NO: 198, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 199.
[00223] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 147, a CDR2 of SEQ ID NO: 148, and a CDR3 of SEQ ID NO: 149, and a VL that comprises a CDR1 of SEQ ID NO: 200, a CDR2 of SEQ ID NO: 185, and a CDR3 of SEQ ID NO: 201
[00224] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 150, a CDR2 of SEQ ID NO: 151, and a CDR3 of SEQ ID NO: 152, and a VL that comprises a CDR1 of SEQ ID NO: 202, a CDR2 of SEQ ID NO: 203, and a CDR3 of SEQ ID NO:
204.
[00225] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 153, a CDR2 of SEQ ID NO: 154, and a CDR3 of SEQ ID NO: 155, and a VL that comprises a CDR1 of SEQ ID NO: 181, a CDR2 of SEQ ID NO: 165, and a CDR3 of SEQ ID NO:
205.
[00226] In some embodiments, the CD38 binding domain comprises a VH that comprises a CDR1 of SEQ ID NO: 156, a CDR2 of SEQ ID NO: 157, and a CDR3 of SEQ ID NO: 158, and a VL that comprises a CDR1 of SEQ ID NO: 206, a CDR2 of SEQ ID NO: 188, and a CDR3 of SEQ ID NO: 207.
Table 5. VH CDR amino acid sequences of anti-CD38 antibodies as defined by Kabat et al.
Figure imgf000041_0001
Figure imgf000042_0001
Table 6. VL CDR amino acid sequences of anti-CD38 antibodies as defined by Kabat et al.
Figure imgf000042_0002
Figure imgf000043_0001
[00227] In some embodiments, a CDR described herein comprises one, two, or three amino acid modifications. In some embodiments, said modification is a substitution, addition, or deletion. In some embodiments, a CDR described herein comprises one, two, or three conservative amino acid substitutions. In some embodiments, the one, two, or three amino acid modifications does not substantially modify binding to human CD38. In some embodiments, the one, two, or three amino acid modifications modifies binding to human CD38. In some embodiments, a VH-CDR3 and/or VL- CDR3 comprises an amino acid substitution that modifies binding to human CD38, immunogenicity, or some other feature. In some embodiments, the amino acid substitution is an alanine (A).
Variable Heavy and Variable Light Regions
[00228] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 7 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00229] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence disclosed in Table 8 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00230] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence disclosed in Table 7 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence disclosed in Table 8 or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00231] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00232] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 212, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00233] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 213, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00234] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 214, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00235] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 215, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00236] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 216, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00237] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 217, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00238] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 218, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00239] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 219, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00240] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 220, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00241] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 221, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00242] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 222, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00243] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 223, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00244] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 224, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00245] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 225, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00246] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 226, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00247] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 227, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00248] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 228, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00249] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 229, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00250] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 230, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00251] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 231, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00252] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 232, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00253] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 233, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00254] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 234, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00255] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 235, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00256] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 236, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00257] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 237, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00258] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 238, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00259] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 239, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00260] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 240, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00261] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 241, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00262] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 242, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00263] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 243, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00264] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 244, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00265] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 245, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00266] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 246, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00267] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 247, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00268] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 248, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00269] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 249, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00270] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 250, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00271] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 251, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00272] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 252, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00273] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 253, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00274] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 254, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00275] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 255, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00276] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 256, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00277] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 257, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00278] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 258, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00279] In some embodiments, the CD38 binding domain comprises a VL that comprises an amino acid sequence of SEQ ID NO: 259, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00280] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 234, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00281] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 212, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 235, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00282] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 213, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 236, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00283] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 214, 215, 216, 217, 218, or 211, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 237, 238, 239, 240, 241, 242, 234, 243, or 244, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00284] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 219, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 245, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00285] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 220, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 246, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity). [00286] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 221, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 247, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00287] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 222, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 248, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00288] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 223, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 249, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00289] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 224, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 250, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00290] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 225, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 251, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00291] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 226, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 252, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00292] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 227, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 253, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00293] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 228, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 254, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00294] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 229, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 255, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00295] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 230, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 256, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00296] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 231, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 257, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00297] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 232, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 258, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
[00298] In some embodiments, the CD38 binding domain comprises a VH that comprises an amino acid sequence of SEQ ID NO: 233, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity); and a VL that comprises an amino acid sequence of SEQ ID NO: 259, or a sequence substantially identical thereto (e.g., a sequence that has at least 70%, 75%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99% sequence identity).
Table 7. Amino acid sequence of the anti-CD38 variable heavy chain binding domains. CDRs according to Kabat et al. are underlined.
Figure imgf000053_0001
Figure imgf000054_0001
Figure imgf000055_0001
Table 8. Amino acid sequence of the anti-CD38 variable light chain binding domains. CDRs according to Kabat et al. are underlined.
Figure imgf000055_0002
Figure imgf000056_0001
Multispecific Antibodies
[00299] In one aspect, provided herein are multispecific antibodies comprising a CD38 binding domain (e.g., as described herein) and an EpCAM binding domain (e.g., as described herein). [00300] In some embodiments, the multispecific antibody is bivalent (i.e. contains two antigen binding domains), trivalent, or tetravalent. In some embodiments, the multispecific antibody comprises at least two, three, or four binding domains that bind CD38. In some embodiments, each of said two, three, or four binding domains that bind CD38 can be the same or different. In some embodiments, the multispecific antibody comprises at least two, three, or four binding domains that bind EpCAM. In some embodiments, each of said two, three, or four binding domains that bind EpCAM can be the same or different. In some embodiments, the multispecific antibody is bispecific, trispecific, or tetraspecific.
[00301] In some embodiments, the multispecific antibody is a heterodimeric antibody.
[00302] In some embodiments, the antibody comprises four polypeptide chains, wherein a first polypeptide comprises a VH domain, a CHI domain, a hinge, a CH2 domain, and a CH3 domain, and pairs with a second polypeptide chain that comprises a VL and a CL domain, wherein said VH and VL form a binding domain that binds CD38; and a third polypeptide comprises a VH domain, a CHI domain, a hinge, a CH2 domain, and a CH3 domain, and pairs with a second polypeptide chain that comprises a VL and a CL domain, wherein said VH and VL form a binding domain that binds EpCAM; and wherein said first polypeptide and said third polypeptide pair via one or more disulfide bond.
[00303] In some embodiments, the multispecific antibody comprises two antibody fragments connected to an antibody Fc region.
[00304] For example, in some embodiments, the antibody comprises three polypeptides, wherein the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a scFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region. In some embodiments, the antibody comprises three polypeptides, wherein the CD38 binding domain comprises a ScFv, and the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
[00305] in some embodiments, the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region. In some embodiments, the CD38 binding domain comprises a ScFv, and the EpCAM binding domain comprises a ScFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to an Fc region.
[00306] In some embodiments, the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a scFv, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to the N terminus of an Fc region. In some embodiments, the CD38 binding domain comprises a ScFv, and the EpCAM binding domain comprises a Fab, wherein both the Fab and scFv are connected to (either directly or indirectly via a linker) to the N terminus of an Fc region. [00307] In some embodiments, the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a scFv, wherein the Fab is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the ScFv is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region. In some embodiments, the CD38 binding domain comprises a Fab, and the EpCAM binding domain comprises a scFv, wherein the ScFv is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the Fab is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
[00308] In some embodiments, the EpCAM binding domain comprises a Fab, and the CD38 binding domain comprises a scFv, wherein the Fab is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the ScFv is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region. In some embodiments, the EpCAM binding domain comprises a Fab, and the CD38 binding domain comprises a scFv, wherein the ScFv is connected to (either directly or indirectly via a linker) to the N terminus of an Fc region and the Fab is connected to (either directly or indirectly via a linker) to the C terminus of the Fc region.
Table 9: Exemplary Amino Acid Sequences of Bispecific Anti-CD38/Anti-EpCAM Antibodies
Figure imgf000058_0001
Figure imgf000059_0001
Figure imgf000060_0001
Figure imgf000061_0001
Fc-Containing Multispecific Antibodies
[00309] In some embodiments, the multispecific antibodies disclosed herein include an immunoglobulin constant region (e.g., an Fc region). Exemplary Fc regions can be chosen from the heavy chain constant regions of IgGl, IgG2, IgG3 or IgG4; more particularly, the heavy chain constant region of human IgGl or IgG4. In some embodiments, the immunoglobulin constant region (e.g., the Fc region) is altered, e.g., mutated, to increase or decrease one or more of: Fc receptor binding, antibody glycosylation, the number of cysteine residues, effector cell function, or complement function. In other embodiments, an interface of a first and second immunoglobulin constant regions (e.g., a first and a second Fc region) is altered, e.g., mutated, to increase or decrease dimerization, e.g., relative to a non-engineered interface, e.g., a naturally-occurring interface. For example, dimerization of the immunoglobulin chain constant region (e.g., the Fc region) can be enhanced by providing an Fc interface of a first and a second Fc region with one or more of: a paired protuberance-cavity (“knob-in-a hole”), an electrostatic interaction, or a strand-exchange, such that a greater ratio of heteromul timer to homomultimer forms, e.g., relative to a non-engineered interface.
Fc Modifications In some embodiments, the multispecific antibody comprises at least one amino acid modification in the Fc region. A modification includes an amino acid substitution, deletion, or addition. In some embodiments, the at least one mutation comprises an amino acid substitution. In some embodiments, the at least one amino acid modification (e.g., substitution) modulates the half-life of the antibody; ability of the antibody to induce ADCC, ADCP, and/or CDC activity against a target cell; modulate stability of the antibody; and/or glycosylation of the antibody.
Antibody Half Life
[00310] In some embodiments, the multispecific antibody comprises at least one amino acid modification that increases stability the antibody and/or increases half-life of the antibody.
[00311] In some embodiments, the antibody comprises an amino acid modification (e.g., substitution) that increases half-life of the antibody, and said modification is at one or more of positions T250, M252, S254, T256, M428, H433, N434 of IgGl (numbering according to EU as described in Kabat et al.), or any combination thereof. In some embodiments, the antibody comprises a T250Q and an M428L substitutions (numbering according to EU as described in Kabat et al.). In some embodiments, the antibody comprises a M252Y, S254T, and T256E substitutions (numbering according to EU as described in Kabat et al.). In some embodiments, said antibody comprises a H433K and a N434F substitution (numbering according to EU as described in Kabat et al.).
ADCC. ADCP . and CDC
[00312] In some embodiments, the multispecific antibody comprises at least one mutation that increases ADCC. In some embodiments, the multispecific antibody comprises at least one mutation that increases antibody-dependent cellular-mediated phagocytosis (ADCP). In some embodiments, the multispecific antibody comprises at least one mutation that increases CDC.
[00313] In some embodiments, the multispecific antibody comprises a modification at least one amino acid position in the Fc region that alters an Fc receptor interaction that leads to increased ADCC. In some embodiments, the modification comprises an amino acid substitution at an amino acid position corresponding to S239, K326, A330, 1332, E333 of IgGl (EU numbering according to Kabat), or any combination thereof. In some embodiments, the multispecific antibody comprises amino acid substitutions: E333A, S239D/A330L/I332E, or K326W/E333S of IgGl (EU numbering according to Kabat), or any combination thereof. In some embodiments, the multispecific antibody comprises amino acid substitutions S239D/A330L/I332E of IgGl (EU numbering according to Kabat). In some embodiments, the multispecific antibody comprises amino acid substitutions: K326W/E333S of IgGl (EU numbering according to Kabat). [00314] In some embodiments, the human IgG constant region is modified to alter its ADCC and/or ADCP activity, e.g., with an amino acid modification described in Natsume et al., 2008 Cancer Res, 68(10): 3863-72; Idusogie et al., 2001 J Immunol, 166(4): 2571-5; Moore et al., 2010 mAbs, 2(2): 181- 189; Lazar et al., 2006 PNAS, 103(11): 4005-4010, Shields et al., 2001 JBC, 276( 9): 6591- 6604; Stavenhagen et al., 2007 Cancer Res, 67(18): 8882-8890; Stavenhagen et al., 2008 Advan. Enzyme Regul., 48: 152-164; Alegre et al, 1992 J Immunol, 148: 3461-3468; Reviewed in Kaneko and Niwa, 2011 Biodrugs, 25(1): 1-11.
[00315] In some embodiments, the multispecific antibody is modified at least one amino acid position to alter interaction with an Fc receptor. Exemplary residues that modulate Fc receptor interactions include, but are not limited to, G236, S239, T250, M252, S254, T256, K326, A330, 1332, E333A, M428, H433, or N434 of IgGl (EU numbering according to Rabat). In some instances, the mutation comprises G236A, S239D, T250Q, M252Y, S254T, T256E, K326W, A330L, I332E, E333A, E333S, M428L, H433K, or N434F of IgGl (EU numbering according to Rabat), or any combination thereof.
Glycosylation
[00316] In some embodiments, an amino acid corresponding to amino acid N297 in IgGl is mutated to alter glycosylation of said antibody. In some embodiments, the Fc region is deglycosylated at residue N297.
[00317] In some embodiments, the multispecific antibody described herein has reduced or lacks glycosylation but is not modified at amino acid N297 (Rabat numbering). In these instances, the glycosylation is, for example, eliminated by production of the antibody in a host cell that lacks a post- translational glycosylation capacity, for example a bacterial or yeast derived system or a modified mammalian cell expression system. In some embodiments, the cell is a mammalian cell such as a Chinese Hamster Ovary cell line. In some embodiments, the cell is unable to express fucosyltransferase 8 (FUT8). In certain aspects, such a system is a cell-free expression system. In some embodiments, the IgGl constant region is afucosylated. In other embodiments, the IgGl is expressed in cells incapable of fucosylation. In some embodiments, the cell is a mammalian cell such as a Chinese Hamster Ovary cell line. In some embodiments, the cell is unable to express fucosyltransferase 8 (FUT8).
Methods of Making Bispecific Antibodies
[00318] Various methods of producing multispecific (e.g., bispecific) antibodies have been disclosed to address the problem of incorrect heavy chain pairing. Exemplary methods are described below. Exemplary multispecific antibody formats and methods of making said multispecific antibodies are also disclosed in e.g., Speiss et al. Molecular Immunology 67 (2015) 95-106; and Klein et al mAbs 4:6, 653-663; November/December 2012; the entire contents of each of which are incorporated by reference herein.
[00319] Heterodimerized bispecific antibodies are based on the natural IgG structure, wherein the two binding arms recognize different antigens. IgG derived formats that enable defined antigen binding are generated by forced heavy chain heterodimerization, and can be combined with technologies that minimize light chain mispairing (e.g., common light chain). Forced heavy chain heterodimerization can be obtained using any number of technologies known in the art, e.g., knob- in-hole (KiH) or strand exchange engineered domains (SEED).
[00320] Any of the methods described or incorporated herein by reference and the associated formats can be used to make a multispecific antibody described herein.
Knob-in-Hole
[00321] Knob-in-Hole as described in US5731116, US7476724 (the contents of each of which is incorporated herein by reference in their entirety), broadly involves: (1) mutating the CH3 domain of one or both antibodies to promote heterodimerization; and (2) combining the mutated antibodies under conditions that promote heterodimerization. “Knobs” or “protuberances” are typically created by replacing a small amino acid in a parental antibody with a larger amino acid (e.g., T366Y or T366W); “Holes” or “cavities” are created by replacing a larger residue in a parental antibody with a smaller amino acid (e.g., Y407T, T366S, 11368A and/or Y407).
[00322] For bispecific antibodies including an Fc domain, introduction of specific mutations into the constant region of the heavy chains to promote the correct heterodimerization of the Fc portion can be utilized. Several such techniques are reviewed in Klein et al. (mAbs (2012) 4:6, 1-11), the contents of which are incorporated herein by reference in their entirety. These techniques include the “knobs- into-holes” (KiH) approach which involves the introduction of a bulky residue into one of the CH3 domains of one of the antibody heavy chains. This bulky residue fits into a complementary “hole” in the other CH3 domain of the paired heavy chain so as to promote correct pairing of heavy chains (see e.g., US7642228).
[00323] In some instances, the multispecific antibody is an IgGl, and the CH3 domain of the “knob” chain comprises a T366W mutation and the CH3 domain of the “hole” chain comprises mutations T366S, L368A, and Y407V. In some cases, the CH3 domain of the “knob” chain further comprises a Y349C mutation which forms an interchain disulfide bridge with either E356C or S354C in the CH3 domain of the “hole” chain. [00324] In some instances, the CH3 domain of the “knob” chain comprises R409D and K370E mutations and the CH3 domain of the “hole” chain comprises D399K and E357K. In some cases, the CH3 domain of the “knob” chain further comprises a T366W mutation and the CH3 domain of the “hole” chain further comprises mutations T366S, L368A, and Y407V.
[00325] Exemplary KiH mutations include S354C, T366W in the “knob” heavy chain and Y349C, T366S, L368A, Y407V in the “hole” heavy chain. Other exemplary KiH mutations are provided in Table 10, with additional optional stabilizing Fc cysteine mutations.
Table 10. Exemplary Fc KiH mutations and optional Cysteine mutations
Figure imgf000065_0001
Strand Exchanse Ensineered Domains (SEED)
[00326] Another heterodimeric Fc platform that supports bispecific antibody production is strand- exchange engineered domain (SEED) C(H)3 heterodimers. These derivatives of human IgG and IgA C(H)3 domains create complementary human SEED C(H)3 heterodimers that are composed of alternating segments of human IgA and IgG C(H)3 sequences. The resulting pair of SEED C(H)3 domains preferentially associates to form heterodimers when expressed in mammalian cells. SEEDbody (Sb) fusion proteins consist of [IgGl hinge]-C(H)2-[SEED C(H)3], that may be genetically linked to one or more fusion partners (see e.g., Davis J H et al. Protein Eng Des Sel 2010; 23:195-202; and U.S. Pat. No. 8,871,912. The contents of each of which are incorporated by reference herein). Duobody
[00327] Another heterodimeric Fc platform that supports bispecific antibody production is the “Duobody” platform. DuoBody technology involves three basic steps to generate stable bispecific human IgGl antibodies in a post-production exchange reaction. In a first step, two IgGls, each containing single matched mutations in the third constant (CH3) domain, are produced separately using standard mammalian recombinant cell lines. Subsequently, these IgGl antibodies are purified according to standard processes for recovery and purification. After production and purification (post-production), the two antibodies are recombined under tailored laboratory conditions resulting in a bispecific antibody product with a very high yield (typically >95%) (see e.g., Labrijn et al, PNAS 2013; 110(13):5145-5150 and Labrijn et al. Nature Protocols 2014; 9(10):2450-63, the contents of each of which are incorporated by reference herein).
Electrostatic Interactions
[00328] EP1870459 and WO 2009089004 describe strategies for favoring heterodimer formation upon co-expression of different antibody domains in a host cell. In these methods, one or more residues that make up the CH3-CH3 interface in both CH3 domains are replaced with a charged amino acid such that homodimer formation is electrostatically unfavorable and heterodimerization is electrostatically favorable. Additional methods of making multispecific molecules using electrostatic interactions are described in the following references, the contents of each of which is incorporated by reference herein, include US20100015133, U.S. Pat. No. 8,592,562, U.S. Pat. No. 9,200,060, US20140154254A1, and U.S. Pat. No. 9,358,286.
Common Lisht Chain
[00329] Light chain mispairing needs to be avoided to generate homogenous preparations of bispecific IgGs. One way to achieve this is through the use of the common light chain principle, i.e. combining two binders that share one light chain but still have separate specificities. An exemplary method of enhancing the formation of a desired bispecific antibody from a mixture of monomers is by providing a common variable light chain to interact with each of the heteromeric variable heavy chain regions of the bispecific antibody. Compositions and methods of producing bispecific antibodies with a common light chain as disclosed in, e.g., U.S. Pat. No. 7,183,076, US20110177073 Al, EP2847231A1, W02016079081A1, and EP3055329A1, the contents of each of which is incorporated by reference herein. CrossMab
[00330] Another option to reduce light chain mispairing is the CrossMab technology which avoids non-specific L chain mispairing by exchanging CHI and CL domains in the Fab of one half of the bispecific antibody. Such crossover variants retain binding specificity and affinity, but make the two arms so different that L chain mispairing is prevented. The CrossMab technology (as reviewed in Klein et al. Supra) involves domain swapping between heavy and light chains so as to promote the formation of the correct pairings. Briefly, to construct a bispecific IgG-like CrossMab antibody that could bind to two antigens by using two distinct light chain-heavy chain pairs, a two-step modification process is applied. First, a dimerization interface is engineered into the C-terminus of each heavy chain using a heterodimerization approach, e.g., Knob-into-hole (KiH) technology, to ensure that only a heterodimer of two distinct heavy chains from one antibody (e.g., Antibody A) and a second antibody (e.g., Antibody B) is efficiently formed. Next, the constant heavy 1 (CHI) and constant light (CL) domains of one antibody are exchanged (Antibody A), keeping the variable heavy (VH) and variable light (VL) domains consistent. The exchange of the CHI and CL domains ensured that the modified antibody (Antibody A) light chain would only efficiently dimerize with the modified antibody (antibody A) heavy chain, while the unmodified antibody (Antibody B) light chain would only efficiently dimerize with the unmodified antibody (Antibody B) heavy chain; and thus only the desired bispecific CrossMab would be efficiently formed (see e.g., Cain, C. SciBX 4(28); doi: 10.1038/scibx.2011.783, the contents of which are incorporated by reference herein).
Common Heavy Chain
[00331] An exemplary method of enhancing the formation of a desired bispecific antibody from a mixture of monomers is by providing a common variable heavy chain to interact with each of the heteromeric variable light chain regions of the bispecific antibody. Compositions and methods of producing bispecific antibodies with a common heavy chain are disclosed in, e.g., US20120184716, US20130317200, and US20160264685A1, the contents of each of which is incorporated by reference herein.
Bispecific Antibody Binding to Target Cells
[00332] In some embodiments, a multispecific antibody of the present disclosure that comprises a CD38 binding domain and an EpCAM binding domain has enhanced affinity for a cell that expresses CD38 and EpCAM compared to a bivalent antibody comprising only CD38 binding domains or a bivalent antibody comprising only EpC AM-binding domains. [00333] In some embodiments, a multispecific antibody of the present disclosure that comprises a CD38 binding domain and an EpCAM binding domain, binds to a cell that expresses on its surface CD38 and EpCAM, with at least 2-50 fold, 10-100 fold, 2-fold, 5-fold, 10-fold, 25-fold, 50-fold or 100-fold, or 20-50%, 50-100%, 20%, 25%, 30%, 40%, 50%, 60%, 70%, 80%, 90% or 100% higher affinity (e.g., preferentially binds) compared to the binding affinity of an antibody that is bivalent to only one of CD38 or EpCAM, to the cell. In some instances, the multispecific antibody has 1.5, 2, 3, 4, 5, or 10-fold higher affinity for the cell with higher EpCAM expression than CD38 expression compared to a bivalent protein that binds to CD38.
[00334] In some embodiments, a multispecific antibody provided herein binds to a target cell that expresses a higher level of EpCAM than CD38, on its surface. For instance, the ratio of EpCAM to CD38 protein expression on the target cell surface, is from about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 25, 50, 100, or greater than 200 as measured by flow cytometry.
[00335] In some embodiments, the target cell is a cancer cell. In some embodiments, the cancer cell is an epithelial cancer cell. In some embodiments, the cancer cell is a carcinoma. In some embodiments, the carcinoma is an adenocarcinoma. In some embodiments, the target cell is a cancer cell is a pancreatic cancer cell. In some embodiments, the target cell is a cancer cell is a prostate cancer cell.
Immunological Activity of Multispecific Antibodies on Target Cells
[00336] In some embodiments, the multispecific antibody comprising a CD38 binding domain and an EpCAM binding domain has a higher immunologic activity against a CD38 expressing target cell compared to a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM binding domain. In some embodiments, the multispecific antibody has at least a 1.5, 2, 3, 4, 5, or 10-fold higher immunological activity than a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM-binding domain. In some embodiments, the multispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher immunological activity than a bivalent antibody with only a CD38 binding domain or a bivalent antibody with only an EpCAM-binding domain. Various immunological activities of a multispecific antibody can be measured using in vitro assays such as an ADCC assay, an ADCP assay, and a CDC assay.
Antibody-dependent cell-mediated cytotoxicity (ADCC)
[00337] Methods of measuring or determining ADCC activity of an antibody, including commercially available assays and kits, are well-known in the art, as described, Yamashita et al, Scientific Reports 6: article number 19772 (2016); Kantakamalakul et al,“ A novel EGFP-CEM-NKr flow cytometric method for measuring antibody dependent cell mediated-cytotoxicity (ADCC) activity in HIV-1 infected individuals”, J Immunol Methods 315(Issues 1-2): 1-10; (2006); Gomez- Roman et al,“ A simplified method for the rapid fluorometric assessment of antibody-dependent cell- mediated cytotoxicity”, J Immunol Methods 308 (Issues 1-2): 53-67 (2006); Schnueriger et ah, Development of a quantitative, cell-line based assay to measure ADCC activity mediated by therapeutic antibodies, Molec Immunology 38 (Issues 12-13): 1512-1517 (2011); and Mata et al,“ Effects of cryopreservation on effector cells for antibody dependent cell-mediated cytotoxicity (ADCC) and natural killer (NK) cell activity in 5ICr-release and CDlOVa assays J Immunol Methods 406: 1-9 (2014); all herein incorporated by reference for all purposes.
[00338] Exemplary methods of measuring or determining the ADCC activity of an antibody in the methods described herein include the ADCC assay described in the Examples or the ADCC Reporter Assay commercially available from Promega (Catalog No. G7010 and G7018).
[00339] In some instances, the multispecific antibody has a 1.5, 2, 3, 4, 5, or 10-fold higher ADCC activity than a bivalent antibody with only a CD38 binding domain (monospecific) or a bivalent antibody with only an EpCAM binding domain (monospecific). In some instances, the multispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher ADCC activity than a bivalent (monospecific) antibody with a CD38 binding domain or a bivalent (monospecific) antibody with only an EpCAM binding domain. ADCC activity can be determined using an in vitro cytotoxicity assay.
[00340] In some embodiments, the multispecific antibody mediates ADCC more efficiently than a bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain, wherein the ADCC activity is determined using an in vitro cytotoxicity assay. In some embodiments, the multispecific antibody mediates at least about 5%, at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 75%, at least about 100% higher maximum cytotoxicity in an in vitro ADCC assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain. In some embodiments, the multispecific antibody mediates at least 2-fold, at least 3-fold, at least 4-fold, at least 5-fold or at least 10-fold higher maximum cytotoxicity in an in vitro ADCC assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain.
Antibody dependent cellular phagocytosis (ADCP)
[00341] Suitable assays for evaluating ADCP are known in the art and include, for example, the in vitro cytotoxicity assay with macrophages as effector cells and video microscopy as described by van Bij et al. in Journal of Hepatology Volume 53, Issue 4, October 2010, Pages 677-685. A non-limiting example of an assay for determining the ADCP of CD38 expressing cells as mediated by a multispecific antibody described herein may comprise the steps of: (a) differentiating freshly isolated monocytes to macrophages with 5 days incubation in GM-CSF-containing medium; (b) plating about 100,000 macrophages per well in a multi -well plate in dendritic cell medium with GM-CSF; (c) adding 20,000 CD38-antibody opsonized CD38-expressing cells (e.g., Daudi cells), labelled with a generic fluorescent membrane dye, per well for 45 minutes at 37°C; (d) measuring the percentage of CD 14-positive, CD 19-negative, membrane-dye-positive macrophages on a flow cytometer. In some embodiments, a phagocytosis assay is used to measure the ADCP effect.
[00342] In some embodiments, the multispecific antibody has a 1.5, 2, 3, 4, 5, or 10-fold higher ADCP activity than a bivalent antibody with only a CD38 binding domain (monospecific) or a bivalent antibody with only an EpCAM binding domain (monospecific). In some instances, the bispecific antibody has a 10-20%, 21-30%, 31-40%, 41- 50% or at least 51% higher ADCP activity than a bivalent antibody with only a CD38 binding domain or a bivalent (monospecific) antibody with only an EpCAM binding domain. ADCP activity can be determined using an in vitro FACS based phagocytosis assay.
[00343] In some embodiments, the multispecific antibody mediates antibody dependent cellular phagocytosis (ADCP) more efficiently than a bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain, wherein the ADCP activity is determined using an in vitro FACS based phagocytosis assay. In some embodiments, the bispecific antibody mediates at least about 5%, at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 75%, at least about 100% higher maximum phagocytosis in an in vitro ADCP assay than the bivalent antibody that comprises either the CD38 binding domain or the EpCAM binding domain.
[00344] Immunological activity can also be measured in a cell-line derived xenograft assay, wherein transformed cells are injected into mice and form a tumor. In some instances, a multispecific antibody with a CD38 binding domain and an EpCAM binding domain inhibits the growth of a tumor comprising CD38 expressing cells to a greater extent than a bivalent protein with the same CD38 binding domain or a bivalent protein with the same EpCAM-binding domain. In some instances, the multispecific antibody exhibits 1.5, 2, 3, 4, 5, or 10-fold higher inhibition of xenograft tumor growth compared to a bivalent protein with a CD38 binding domain or a bivalent protein with an EpCAM binding domain. Production of Antibodies or Binding Fragments Thereof
[00345] In some embodiments, polypeptides described herein (e.g., antibodies and its binding fragments) are produced using any method known in the art to be useful for the synthesis of polypeptides (e.g., antibodies), in particular, by chemical synthesis or by recombinant expression, and are preferably produced by recombinant expression techniques.
[00346] In some instances, an antibody or its binding fragment thereof is expressed recombinantly, and the nucleic acid encoding the antibody or its binding fragment is assembled from chemically synthesized oligonucleotides (e.g., as described in Kutmeier et al., 1994, BioTechniques 17:242), which involves the synthesis of overlapping oligonucleotides containing portions of the sequence encoding the antibody, annealing and ligation of those oligonucleotides, and then amplification of the ligated oligonucleotides by PCR.
[00347] Alternatively, a nucleic acid molecule encoding an antibody is optionally generated from a suitable source (e.g., an antibody cDNA library, or cDNA library generated from any tissue or cells expressing the immunoglobulin) by PCR amplification using synthetic primers hybridizable to the 3' and 5' ends of the sequence or by cloning using an oligonucleotide probe specific for the particular gene sequence.
[00348] In some instances, an antibody or its binding is optionally generated by immunizing an animal, such as a mouse, to generate polyclonal antibodies or, more preferably, by generating monoclonal antibodies, e.g., as described by Kohler and Milstein (1975, Nature 256:495-497) or, as described by Kozbor et al. (1983, Immunology Today 4:72) or Cole et al. (1985 in Monoclonal Antibodies and Cancer Therapy, Alan R. Liss, Inc., pp. 77-96). Alternatively, a clone encoding at least the Fab portion of the antibody is optionally obtained by screening Fab expression libraries (e.g., as described in Huse et al., 1989, Science 246:1275-1281) for clones of Fab fragments that bind the specific antigen or by screening antibody libraries (See, e.g., Clackson et al., 1991, Nature 352:624; Hane et al., 1997 Proc. Natl. Acad. Sci. USA 94:4937).
[00349] In some embodiments, techniques developed for the production of “chimeric antibodies” (Morrison et al., 1984, Proc. Natl. Acad. Sci. 81:851-855; Neuberger et al., 1984, Nature 312:604- 608; Takeda et al., 1985, Nature 314:452-454) by splicing genes from a mouse antibody molecule of appropriate antigen specificity together with genes from a human antibody molecule of appropriate biological activity are used. A chimeric antibody is a molecule in which different portions are derived from different animal species, such as those having a variable region derived from a murine monoclonal antibody and a human immunoglobulin constant region.
[00350] In some embodiments, techniques described for the production of single chain antibodies (U.S. Pat. No. 4,694,778; Bird, 1988, Science 242:423-42; Huston et al., 1988, Proc. Natl. Acad. Sci. USA 85:5879-5883; and Ward et al., 1989, Nature 334:544-54) are adapted to produce single chain antibodies. Single chain antibodies are formed by linking the heavy and light chain fragments of the Fv region via an amino acid bridge, resulting in a single chain polypeptide. Techniques for the assembly of functional Fv fragments in E. coli are also optionally used (Skerra et al., 1988, Science 242:1038-1041).
[00351] In some embodiments, an expression vector comprising the nucleotide sequence of an antibody or the nucleotide sequence of an antibody is transferred to a host cell by conventional techniques (e.g., electroporation, liposomal transfection, and calcium phosphate precipitation), and the transfected cells are then cultured by conventional techniques to produce the antibody. In specific embodiments, the expression of the antibody is regulated by a constitutive, an inducible or a tissue, specific promoter.
[00352] In some embodiments, a variety of host-expression vector systems is utilized to express an antibody, or its binding fragment described herein. Such host-expression systems represent vehicles by which the coding sequences of the antibody is produced and subsequently purified, but also represent cells that are, when transformed or transfected with the appropriate nucleotide coding sequences, express an antibody or its binding fragment in situ. These include, but are not limited to, microorganisms such as bacteria (e.g., E. coli and B. subtilis) transformed with recombinant bacteriophage DNA, plasmid DNA or cosmid DNA expression vectors containing an antibody or its binding fragment coding sequences; yeast (e.g., Saccharomyces Pichia) transformed with recombinant yeast expression vectors containing an antibody or its binding fragment coding sequences; insect cell systems infected with recombinant virus expression vectors (e.g., baculovirus) containing an antibody or its binding fragment coding sequences; plant cell systems infected with recombinant virus expression vectors (e.g., cauliflower mosaic virus (CaMV) and tobacco mosaic virus (TMV)) or transformed with recombinant plasmid expression vectors (e.g., Ti plasmid) containing an antibody or its binding fragment coding sequences; or mammalian cell systems (e.g., COS, CHO, BH, 293, 293T, 3T3 cells) harboring recombinant expression constructs containing promoters derived from the genome of mammalian cells (e.g., metallothionein promoter) or from mammalian viruses (e.g. the adenovirus late promoter; the vaccinia virus 7.5K promoter).
[00353] For long-term, high-yield production of recombinant proteins, stable expression is preferred. In some instances, cell lines that stably express an antibody are optionally engineered. Rather than using expression vectors that contain viral origins of replication, host cells are transformed with DNA controlled by appropriate expression control elements (e.g., promoter, enhancer, sequences, transcription terminators, polyadenylation sites, etc.), and a selectable marker. Following the introduction of the foreign DNA, engineered cells are then allowed to grow for 1-2 days in an enriched media, and then are switched to a selective media. The selectable marker in the recombinant plasmid confers resistance to the selection and allows cells to stably integrate the plasmid into their chromosomes and grow to form foci that in turn are cloned and expanded into cell lines. This method can advantageously be used to engineer cell lines which express the antibody or its binding fragments. [00354] In some instances, a number of selection systems are used, including but not limited to the herpes simplex virus thymidine kinase (Wigler et ah, 1977, Cell 11:223), hypoxanthine-guanine phosphoribosyltransferase (Szybalska & Szybalski, 192, Proc. Natl. Acad. Sci. USA 48:202), and adenine phosphoribosyltransferase (Lowy et ah, 1980, Cell 22:817) genes are employed in tk-, hgprt- or aprt- cells, respectively. Also, antimetabolite resistance are used as the basis of selection for the following genes: dhfir, which confers resistance to methotrexate (Wigler et ah, 1980, Proc. Natl. Acad. Sci. USA 77:357; O'Hare et ah, 1981, Proc. Natl. Acad. Sci. USA 78:1527); gpt, which confers resistance to mycophenolic acid (Mulligan & Berg, 1981, Proc. Natl. Acad. Sci. USA 78:2072); neo, which confers resistance to the aminoglycoside G-418 (Clinical Pharmacy 12:488- 505; Wu and Wu, 1991, Biotherapy 3:87-95; Tolstoshev, 1993, Ann. Rev. Pharmacol. Toxicol. 32:573-596; Mulligan, 1993, Science 260:926-932; and Morgan and Anderson, 1993, Ann. Rev. Biochem. 62:191-217; May 1993, TIB TECH 11(5): 155-215) and hygro, which confers resistance to hygromycin (Santerre et ah, 1984, Gene 30:147). Methods commonly known in the art of recombinant DNA technology which can be used are described in Ausubel et al. (eds., 1993, Current Protocols in Molecular Biology, John Wiley & Sons, NY; Kriegler, 1990, Gene Transfer and Expression, A Laboratory Manual, Stockton Press, NY; and in Chapters 12 and 13, Dracopoli et al. (eds), 1994, Current Protocols in Human Genetics, John Wiley & Sons, NY.; Colberre-Garapin et al., 1981, J. Mol. Biol. 150:1).
[00355] In some instances, the expression levels of an antibody are increased by vector amplification (for a review, see Bebbington and Hentschel, the use of vectors based on gene amplification for the expression of cloned genes in mammalian cells in DNA cloning, Vol. 3. (Academic Press, New York, 1987)). When a marker in the vector system expressing an antibody is amplifiable, an increase in the level of inhibitor present in culture of host cell will increase the number of copies of the marker gene. Since the amplified region is associated with the nucleotide sequence of the antibody, production of the antibody will also increase (Crouse et al., 1983, Mol. Cell Biol. 3:257).
[00356] In some instances, any method known in the art for purification of an antibody is used, for example, by chromatography (e.g., ion exchange, affinity, particularly by affinity for the specific antigen after Protein A, and sizing column chromatography), centrifugation, differential solubility, or by any other standard technique for the purification of proteins. Expression Vectors
[00357] In some embodiments, vectors include any suitable vectors derived from either a eukaryotic or prokaryotic sources. In some cases, vectors are obtained from bacteria (e.g. E. coli), insects, yeast (e.g. Pichia pastoris), algae, or mammalian sources. Exemplary bacterial vectors include pACYC177, pASK75, pBAD vector series, pBADM vector series, pET vector series, pETM vector series, pGEX vector series, pHAT, pHAT2, pMal-c2, pMal-p2, pQE vector series, pRSET A, pRSET B, pRSET C, pTrcHis2 series, pZA31-Luc, pZE21-MCS-l, pFLAG ATS, pFLAG CTS, pFLAG MAC, pFLAG Shift- 12c, pTAC-MAT-1, pFLAG CTC, or pTAC-MAT-2.
[00358] Exemplary insect vectors include pFastBacl, pFastBac DUAL, pFastBac ET, pFastBac HTa, pFastBac HTb, pFastBac HTc, pFastBac M30a, pFastBact M30b, pFastBac, M30c, pVL1392, pVL1393, pVL1393 M10, pVL1393 Mi l, pVL1393 Ml 2, FLAG vectors such as pPolh-FLAGl or pPolh-MAT 2, or MAT vectors such as pPolh-MATl, or pPolh-MAT2.
[00359] In some cases, yeast vectors include Gateway® pDEST™ 14 vector, Gateway® pDEST™ 15 vector, Gateway® pDEST™ 17 vector, Gateway® pDEST™ 24 vector, Gateway® pYES- DEST52 vector, pBAD-DEST49 Gateway® destination vector, pA0815 Pichia vector, pFLDl Pichi pastoris vector, pGAPZA,B, & C Pichia pastoris vector, pPIC3.5K Pichia vector, pPIC6 A, B, & C Pichia vector, pPIC9K Pichia vector, pTEFl/Zeo, pYES2 yeast vector, pYES2/CT yeast vector, pYES2/NT A, B, & C yeast vector, or pYES3/CT yeast vector.
[00360] Exemplary algae vectors include pChlamy-4 vector or MCS vector.
[00361] Examples of mammalian vectors include transient expression vectors or stable expression vectors. Mammalian transient expression vectors may include pRK5, p3xFLAG-CMV 8, pFLAG- Myc-CMV 19, pFL AG-My c-CM V 23, pFLAG-CMV 2, pFLAG-CMV 6a,b,c, pFLAG-CMV 5.1, pFLAG-CMV 5a,b,c, p3xFLAG-CMV 7.1, pFLAG-CMV 20, p3xFLAG-Myc-CMV 24, pCMV- FLAG-MAT1, pCMV-FLAG-MAT2, pBICEP-CMV 3, or pBICEP-CMV 4. Mammalian stable expression vector may include pFLAG-CMV 3, p3xFLAG-CMV 9, p3xFLAG-CMV 13, pFLAG- Myc-CMV 21, p3xFLAG-Myc-CMV25, pFLAG-CMV 4, p3xFLAG-CMV 10, p3xFLAG-CMV 14, pFLAG-Myc-CMV 22, p3xFLAG-Myc-CMV 26, pBICEP-CMV 1, or pBICEP-CMV 2.
[00362] In some instances, a cell-free system is a mixture of cytoplasmic and/or nuclear components from a cell and is used for in vitro nucleic acid synthesis. In some cases, a cell-free system utilizes either prokaryotic cell components or eukaryotic cell components. Sometimes, a nucleic acid synthesis is obtained in a cell-free system based on for example Drosophila cell, Xenopus egg, or HeLa cells. Exemplary cell-free systems include, but are not limited to, E. coli S30 Extract system, E. coli T7 S30 system, or PURExpress®. Host Cells
[00363] In some embodiments, a host cell includes any suitable cell such as a naturally derived cell or a genetically modified cell. In some instances, a host cell is a production host cell. In some instances, a host cell is a eukaryotic cell. In other instances, a host cell is a prokaryotic cell. In some cases, a eukaryotic cell includes fungi (e.g., yeast cells), animal cell or plant cell. In some cases, a prokaryotic cell is a bacterial cell. Examples of bacterial cell include gram-positive bacteria or gram negative bacteria. Sometimes the gram-negative bacteria is anaerobic, rod-shaped, or both.
[00364] In some instances, gram-positive bacteria include Actinobacteria, Firmicutes or Tenericutes. In some cases, gram-negative bacteria include Aquificae, Deinococcus-Thermus, Fibrobacteres- Chlorobi/Bacteroidetes (FCB group), Fusobacteria, Gemmatimonadetes, Nitrospirae, Planctomycetes-Verrucomicrobia/ Chlamydiae (PVC group), Proteobacteria, Spirochaetes or Synergistetes. Other bacteria can be Acidobacteria, Chloroflexi, Chrysiogenetes, Cyanobacteria, Deferribacteres, Dictyoglomi, Thermodesulfobacteria or Thermotogae. A bacterial cell can be Escherichia coli, Clostridium botulinum, or Coli bacilli.
[00365] Exemplary prokaryotic host cells include, but are not limited to, BL21, Machl™, DH10B™, TOP10, DH5a, DHlOBac™, OmniMax™, MegaX™, DH12S™, INV110, TOP10F’, INVaF, TOP10/P3, ccdB Survival, PIR1, PIR2, Stbl2™, Stbl3™, or Stbl4™.
[00366] In some instances, animal cells include a cell from a vertebrate or from an invertebrate. In some cases, an animal cell includes a cell from a marine invertebrate, fish, insects, amphibian, reptile, or mammal. In some cases, a fungus cell includes a yeast cell, such as brewer’s yeast, baker’s yeast, or wine yeast.
[00367] Fungi include ascomycetes such as yeast, mold, filamentous fungi, basidiomycetes, or zygomycetes. In some instances, yeast includes Ascomycota or Basidiomycota. In some cases, Ascomycota includes Saccharomycotina (true yeasts, e.g. Saccharomyces cerevisiae (baker’s yeast)) or Taphrinomycotina (e.g. Schizosaccharomycetes (fission yeasts)). In some cases, Basidiomycota includes Agaricomycotina (e.g. Tremellomycetes) or Pucciniomycotina (e.g. Microbotryomycetes). [00368] Exemplary yeast or filamentous fungi include, for example, the genus: Saccharomyces, Schizosaccharomyces, Candida, Pichia, Hansenula, Kluyveromyces, Zygosaccharomyces, Yarrowia, Trichosporon, Rhodosporidi, Aspergillus, Fusarium, or Trichoderma. Exemplary yeast or filamentous fungi include, for example, the species: Saccharomyces cerevisiae, Schizosaccharomyces pombe, Candida utilis, Candida boidini, Candida albicans, Candida tropicalis, Candida stellatoidea, Candida glabrata, Candida krusei, Candida parapsilosis, Candida guilliermondii, Candida viswanathii, Candida lusitaniae, Rhodotorula mucilaginosa, Pichia metanolica, Pichia angusta, Pichia pastoris, Pichia anomala, Hansenula polymorpha, Kluyveromyces lactis, Zygosaccharomyces rouxii, Yarrowia lipolytica, Trichosporon pullulans, Rhodosporidium tom-Aspergillus niger, Aspergillus nidulans, Aspergillus awamori, Aspergillus oryzae, Trichoderma reesei, Yarrowia lipolytica, Brettanomyces bruxellensis, Candida stellata, Schizosaccharomyces pombe, Torulaspora delbrueckii, Zygosaccharomyces bailii, Cryptococcus neoformans, Cryptococcus gattii, or Saccharomyces boulardii.
[00369] Exemplary yeast host cells include, but are not limited to, Pichia pastoris yeast strains such as GS115, KM71H, SMD1168, SMD1168H, and X-33; and Saccharomyces cerevisiae yeast strain such as INVScl.
[00370] In some instances, additional animal cells include cells obtained from a mollusk, arthropod, annelid or sponge. In some cases, an additional animal cell is a mammalian cell, e.g., from a primate, ape, equine, bovine, porcine, canine, feline or rodent. In some cases, a rodent includes mouse, rat, hamster, gerbil, hamster, chinchilla, fancy rat, or guinea pig.
[00371] Exemplary mammalian host cells include, but are not limited to, 293A cell line, 293FT cell line, 293F cells , 293 H cells, CHO DG44 cells, CHO-S cells, CHO-K1 cells, FUT8 KO CHOK1, Expi293F™ cells, Flp-In™ T-REx™ 293 cell line, Flp-In™-293 cell line, Flp-In™-3T3 cell line, Flp-In™-BHK cell line, Flp-In™-CHO cell line, Flp-In™-CV-l cell line, Flp-In™-Jurkat cell line, FreeStyle™ 293-F cells, FreeStyle™ CHO-S cells, GripTite™ 293 MSR cell line, GS-CHO cell line, HepaRG™ cells, T-REx™ Jurkat cell line, Per.C6 cells, T-REx™-293 cell line, T-REx™-CHO cell line, and T-REx™-HeLa cell line.
[00372] In some instances, a mammalian host cell is a stable cell line, or a cell line that has incorporated a genetic material of interest into its own genome and has the capability to express the product of the genetic material after many generations of cell division. In some cases, a mammalian host cell is a transient cell line, or a cell line that has not incorporated a genetic material of interest into its own genome and does not have the capability to express the product of the genetic material after many generations of cell division.
[00373] Exemplary insect host cells include, but are not limited to, Drosophila S2 cells, Sf9 cells, Sf21 cells, High Five™ cells, and expresSF+® cells.
[00374] In some instances, plant cells include a cell from algae. Exemplary insect cell lines include, but are not limited to, strains from Chlamydomonas reinhardtii 137c, or Synechococcus elongatus PPC 7942.
Pharmaceutical Compositions, Formulations and Routes of Administration [00375] In a further aspect, the invention provides pharmaceutical compositions comprising any of the bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM provided herein, e.g., for use in any of the below therapeutic methods. In one embodiment, a pharmaceutical composition comprises any of the bispecific antibodies provided herein and at least one pharmaceutically acceptable excipient. In another embodiment, a pharmaceutical composition comprises any of the bispecific antibodies provided herein and at least one additional therapeutic agent, e.g., as described below. The preparation of a pharmaceutical composition that contains at least one bispecific antibody and optionally an additional active ingredient will be known to those of skill in the art in light of the present disclosure, as exemplified by Remington's Pharmaceutical Sciences, 18th Ed. Mack Printing Company, 1990, incorporated by reference herein.
Therapeutic Methods
[00376] Any of the antibodies described herein comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM may be used in therapeutic methods.
[00377] For use in therapeutic methods, bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before can be formulated, dosed, and administered in a fashion consistent with good medical practice. Factors for consideration in this context include the particular disorder being treated, the particular mammal being treated, the clinical condition of the individual patient, the cause of the disorder, the site of delivery of the agent, the method of administration, the scheduling of administration, and other factors known to medical practitioners.
[00378] In one aspect, bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein for use as a medicament are provided. In further aspects, bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein for use in treating a disease, in particular for use in the treatment of cancer, are provided. In certain embodiments, bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM for use in a method of treatment are provided. In one embodiment, the invention provides bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as described herein for use in the treatment of a disease in an individual in need thereof. In certain embodiments, the invention provides bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM for use in a method of treating an individual having a disease comprising administering to the individual a therapeutically effective amount of the bispecific antibody. In certain embodiments the disease to be treated is cancer. In a further aspect, the invention provides for the use of bispecific antibodies comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before in the manufacture or preparation of a medicament for the treatment of a disease in an individual in need thereof. In one embodiment, the medicament is for use in a method of treating a disease comprising administering to an individual having the disease a therapeutically effective amount of the medicament.
[00379] In certain aspects, the disease to be treated is a proliferative disorder, particularly cancer. [00380] In some embodiments, the cancer is a solid tumor. In some embodiments, the cancer is an epithelial cancer. In some embodiments, the cancer is a carcinoma. In some embodiments the cancer is an adenocarcinoma. In some embodiments, the cancer is prostate cancer. In some embodiments, the cancer is pancreatic cancer. In some embodiments, the cancer is a prostate carcinoma. In some embodiments, the cancer is a pancreatic carcinoma.
Articles of Manufacture
[00381] In another aspect of the invention, an article of manufacture containing materials useful for the treatment, prevention and/or diagnosis of the disorders described above is provided. The article of manufacture comprises a container and a label or package insert on or associated with the container. Suitable containers include, for example, bottles, vials, syringes, IV solution bags, etc. The containers may be formed from a variety of materials such as glass or plastic. The container holds a composition which is by itself or combined with another composition effective for treating, preventing and/or diagnosing the condition and may have a sterile access port (for example the container may be an intravenous solution bag or a vial having a stopper that is pierceable by a hypodermic injection needle). At least one active agent in the composition is a bispecific antibody comprising a first antigen-binding site that specifically binds to CD38 and a second antigen-binding site that specifically binds to EpCAM as defined herein before.
[00382] The label or package insert indicates that the composition is used for treating the condition of choice. Moreover, the article of manufacture may comprise (a) a first container with a composition contained therein, wherein the composition comprises the bispecific antibody of the invention; and (b) a second container with a composition contained therein, wherein the composition comprises a further cytotoxic or otherwise therapeutic agent. The article of manufacture in this embodiment of the invention may further comprise a package insert indicating that the compositions can be used to treat a particular condition. Altematively, or additionally, the article of manufacture may further comprise a second (or third) container comprising a pharmaceutically-acceptable buffer, such as bacteriostatic water for injection (BWFI), phosphate-buffered saline, Ringer's solution and dextrose solution. It may further include other materials desirable from a commercial and user standpoint, including other buffers, diluents, filters, needles, and syringes.
List of Embodiments
[00383] The following list of embodiments of the invention are to be considered as disclosing various features of the invention, which features can be considered to be specific to the particular embodiment under which they are discussed, or which are combinable with the various other features as listed in other embodiments. Thus, simply because a feature is discussed under one particular embodiment does not necessarily limit the use of that feature to that embodiment.
[00384] Embodiment 1. A multispecific antibody that comprises a CD38 binding domain and an EpCAM binding domain.
[00385] Embodiment 2. The multispecific antibody of embodiment 1, wherein said multispecific antibody is bispecific, trispecific, or tetraspecific.
[00386] Embodiment 3. The multispecific antibody of embodiment 2, wherein said multispecific antibody is bispecific.
[00387] Embodiment 4. The multispecific antibody of any preceding embodiment, wherein said multispecific antibody is bivalent, trivalent, or tetravalent.
[00388] Embodiment 5. The multispecific antibody of embodiment 4, wherein said multispecific antibody is bivalent.
[00389] Embodiment 6. The multispecific antibody of any preceding claim, wherein said CD38 binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds CD38.
[00390] Embodiment 7. The multispecific antibody of embodiment 6, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
[00391] Embodiment 8. The multispecific antibody of embodiment 7, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of said IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
[00392] Embodiment 9. The multispecific antibody of embodiment 8, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl heavy chain; and said variable domain of said IgG light chain of said CD38 binding domain comprises a variable domain of an IgGl light chain.
[00393] Embodiment 10. The multispecific antibody of any one of embodiments 6-9, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a scFv or a Fab.
[00394] Embodiment 11. The multispecific antibody of any one of embodiments 7-10, wherein said variable domain of said IgG heavy chain (HC) of said CD38 binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein the HC-CDR1, the HC-CDR2, and the HC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1 : SEQ IDNO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ IDNO: 108; b. HC-CDR1: SEQ IDNO: 109; HC-CDR2: SEQ IDNO: 110; HC-CDR3 : SEQ IDNO: 111; and c. HC-CDR1 : SEQ IDNO: 112; HC-CDR2: SEQ IDNO: 113; HC-CDR3: SEQ IDNO: 108. [00395] Embodiment 12. The multispecific antibody of any one of embodiments 7-11, wherein said variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions LC (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO: 166; b. LC-CDR1: SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; LC-CDR3: SEQ ID NO: 169; and c. LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; LC-CDR3: SEQ ID NO: 171. [00396] Embodiment 13. The multispecific antibody of any one of embodiments 7-13, said variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises CDRs: HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC-CDR3 sequences and said HC: HC- CDR1, HC-CDR2, and HC-CDR3 sequences are as set forth in any one of the following sets of sequences: a. HC-CDR1 : SEQ IDNO: 106; HC-CDR2: SEQ IDNO: 107; HC-CDR3 : SEQ IDNO: 108; LC-CDR1 : SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 166; b. HC-CDR1: SEQ IDNO: 109; HC-CDR2: SEQ IDNO: 110; HC-CDR3 : SEQ IDNO: 111; LC-CDR1 : SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; and LC-CDR3 : SEQ ID NO: 169; and c. HC-CDR1 : SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3: SEQ ID NO: 108; LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 172. [00397] Embodiment 14. The multispecific antibody of any one of embodiments 7-10, wherein said variable domain of an IgG heavy chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211-233. [00398] Embodiment 15. The multispecific antibody of any one of embodiments 7-10 or 14, wherein said variable domain of an IgG light chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234-269. [00399] Embodiment 16. The multispecific antibody of any one of embodiments 7-10, wherein said CD38 binding domain comprises a. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 233; or b. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 212; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234.
[00400] Embodiment 17. The multispecific antibody of any one of embodiments 1-19, wherein said EpCAM binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds EpCAM.
[00401] Embodiment 18. The multispecific antibody of embodiment 17, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
[00402] Embodiment 19. The multispecific antibody of embodiment 18, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
[00403] Embodiment 20. The multispecific antibody of embodiment 19, wherein said variable domain of an IgG heavy chain comprises of said EpCAM binding domain a variable domain of an IgGl heavy chain; and said variable domain of an IgG light chain of said EpCAM binding domain comprises a variable domain of an IgGl light chain. [00404] Embodiment 21. The multispecific antibody of any one of embodiments 17-20, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a scFv or a Fab.
[00405] Embodiment 22. The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG heavy chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein said HC-CDR1, the HC-CDR2, and the HC-CDR3 of said variable heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; and b. HC-CDR1: SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6. [00406] Embodiment 23. The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG light chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC- CDR2, and the LC-CDR3 of the heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a. LC-CDR1 : SEQ ID NO: 41; LC-CDR2: SEQ ID NO: 42; LC-CDR3 : SEQ ID NO: 43; and b. LC-CDR1 : SEQ ID NO: 44; LC-CDR2: SEQ ID NO: 45; LC-CDR3 : SEQ ID NO: 46. [00407] Embodiment 24. The multispecific antibody of any one of embodiments 18-22, said variable domain of an IgG light chain (LC) of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said EpCAM binding domain comprises complementarity determining regions HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC- CD3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences comprise sequences with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to sequences as set forth in any one of the following sets of sequences: a. HC-CDR1: SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; LC- CDR1: SEQ ID NO: 43; LC-CDR2: SEQ ID NO: 44; LC-CDR3 : SEQ ID NO: 45; and b. HC-CDR1: SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6; LC- CDR1: SEQ ID NO: 46; LC-CDR2: SEQ ID NO: 47; LC-CDR3 : SEQ ID NO: 48.
[00408] Embodiment 25. The multispecific antibody of any one of embodiments 18-21, wherein said variable domain of an IgG heavy chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 76-91, 260-161. [00409] Embodiment 26. The multispecific antibody of any one of embodiments 18-22, wherein said variable domain of an IgG light chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 92-105, 262-268.
[00410] Embodiment 27. The multispecific antibody of any one of embodiments 18-21, wherein EpCAM binding domain comprises a. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 76; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 92; or b. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 77; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 93.
[00411] Embodiment 28. The multispecific antibody of any one of embodiments 1-27, further comprising an IgG hinge region, or a portion thereof.
[00412] Embodiment 29. The multispecific antibody of embodiment 28, wherein said IgG hinge region is C terminal to said CD38 binding domain or said EpCAM binding domain and N terminal to an Fc region.
[00413] Embodiment 30. The multispecific antibody of any one of embodiments 1-29, further comprising an Fc region.
[00414] Embodiment 31. The multispecific antibody of embodiment 29 or 30, wherein said Fc region comprises an IgG CH2 domain and an IgG CH3 domain.
[00415] Embodiment 32. The multispecific antibody of any one of embodiments 29-31, wherein said Fc region comprises a heterodimeric Fc region.
[00416] Embodiment 33. The multispecific antibody of any one of embodiments 29-32, wherein said Fc region comprises at least one amino acid modification that increases the half-life of the multispecific antibody.
[00417] Embodiment 34. The multispecific antibody of any one of embodiments 29-33, wherein said Fc region comprises at least one amino acid modification that modulates its interaction with an Fc receptor.
[00418] Embodiment 35. The multispecific antibody of embodiment 29-34, wherein said Fc region comprises at least one amino acid modification that increases binding of said Fc region to an Fc receptor. [00419] Embodiment 36. The multispecific antibody of any one of embodiments 29-35, wherein said Fc region comprises at least one amino acid modification that decreases glycosylation of the Fc region.
[00420] Embodiment 37. The multispecific antibody of embodiment 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region is an amino acid substitution, deletion, or addition, or a combination thereof.
[00421] Embodiment 38. The multispecific antibody of embodiment 37, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comrpises an amino acid substitution.
[00422] Embodiment 39. The multispecific antibody of embodiment 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution at a position corresponding to position N297 of human IgGl, wherein the numbering is according to the EU index of Kabat.
[00423] Embodiment 40. The multispecific antibody of any one of embodiments 29-39, wherein said Fc region is afucosylated.
[00424] Embodiment 41. The multispecific antibody of any one of embodiments 29-40, wherein said Fc region comprises at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC).
[00425] Embodiment 42. The multispecific antibody of embodiment 41, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC) is an amino acid substitution, deletion, or addition, or a combination thereof.
[00426] Embodiment 43. The multispecific antibody of embodiment 42, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC) comprises an amino acid substitution.
[00427] Embodiment 44. The multispecific antibody of embodiment 43, wherein said Fc region comprises at least one mutation that increases antibody-dependent cellular cytotoxicity (ADCC), wherein said at least one mutation that increases ADCC comprises an amino acid substitution at positions corresponding to positions S239, 1332, and A330 of human IgGl, wherein the amino acid numbering is according to the EU index according to Kabat et al.
[00428] Embodiment 45. The multispecific antibody of embodiment 44, wherein said amino acid substitutions are S239D, I332E, and A330L, wherein the amino acid numbering is according to the EU index according to Kabat et al. [00429] Embodiment 46. The multispecific antibody of any one of embodiments 32-45, comprising said heterodimeric Fc region, wherein said heterodimeric Fc region comprises a knob chain and a hole chain, forming a knob-in-hole (KIH) structure.
[00430] Embodiment 47. The multispecific antibody of embodiment 46, wherein said knob chain comprises an amino acid substitution at a position corresponding to T366 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[00431] Embodiment 48. The multispecific antibody of embodiment 47, wherein said T366 substitution comprises a T336W mutation, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[00432] Embodiment 49. The multispecific antibody of any one of embodiments 46-48, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, or Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[00433] Embodiment 50. The multispecific antibody of embodiment 49, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, and Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al. [00434] Embodiment 51. The multispecific antibody of embodiment 49, wherein said T366, L368, or Y407 amino acid substitutions comprise a T366S, L368A, or Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[00435] Embodiment 52. The multispecific antibody of embodiment 50, wherein said T366, L368, and Y407 amino acid substitutions comprises a T366S, L368A, and Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
[00436] Embodiment 53. The multispecific antibody of any preceding claim, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cell relative to a monospecific control antibody that comprises said CD38 binding domain but lacks an EpCAM binding domain, as determined by surface plasmon resonance.
[00437] Embodiment 54. The multispecific antibody of any preceding claim, wherein said multispecific antibody binds to a target cell that expresses CD38 and EpCAM on the cell surface with a higher affinity relative to that of a monospecific control antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain, as determined by surface plasmon resonance. [00438] Embodiment 55. The multispecific antibody of any preceding claim, wherein said multispecific antibody induces enhanced antibody-dependent cellular cytotoxicity (ADCC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to ADCC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
[00439] Embodiment 56. The multispecific antibody of embodiment 55, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more ADCC mediated lysis than said control monospecific antibody.
[00440] Embodiment 57. The multispecific antibody of any preceding claim, wherein said multispecific antibody induces enhanced complement-dependent cytotoxicity (CDC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to CDC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
[00441] Embodiment 58. The multispecific antibody of embodiment 57, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more CDC mediated lysis than said control monospecific antibody.
[00442] Embodiment 59. The multispecific antibody of any one of embodiments 53-58, wherein said target cell or population of target cells express a lower level of CD38 relative to EpCAM on the surface of said target cell.
[00443] Embodiment 60. The multispecific antibody of any one of embodiments 53-59, wherein the ratio of EpCAM to CD38 on the cell surface of said target cell or population of target cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
[00444] Embodiment 61. The multispecific antibody of any one of embodiments 53-60, wherein the ratio of EpCAM to CD38 on the surface of said target cell or population of target cells is greater than or equal to the ratio of EpCAM to CD38 on the surface of a DU145 cell or a CFPAC-1 cell.
[00445] Embodiment 62. The multispecific antibody of any one of embodiments 53-60, wherein said target cell or population of target cells comprises a cancer cell.
[00446] Embodiment 63. The multispecific antibody of embodiment 62, wherein said cancer is an epithelial cell.
[00447] Embodiment 64. The multispecific antibody of any preceding claim, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cancer cell than for CD38 expressed on the surface of a comparable non-cancer cell, as determined by surface plasmon resonance.
[00448] Embodiment 65. The multispecific antibody of embodiment 63, wherein EpCAM is expressed on the surface of said target cancer cell.
[00449] Embodiment 66. The multispecific antibody of embodiment 63 or 64, wherein EpCAM is not expressed on the surface of said comparable non-cancer cell. [00450] Embodiment 67. The multispecific antibody of any one of embodiments 63-65, wherein said cancer cell is an epithelial cell.
[00451] Embodiment 68. A nucleic acid molecule encoding the multispecific antibody of any one of embodiments 1-67.
[00452] Embodiment 69. A vector comprising the nucleic acid molecule of embodiment 68.
[00453] Embodiment 70. A pharmaceutical composition comprising the multispecific antibody of any one of embodiments 1-67.
[00454] Embodiment 71. The pharmaceutical composition of embodiment 70, further comprising a pharmaceutically acceptable carrier, an excipient, or any combinations thereof.
[00455] Embodiment 72. A method of treating a subject having cancer, said method comprising: administering to said subject the multispecific antibody of any one of embodiments 1-67 or the pharmaceutical composition of embodiment 70 or 71.
[00456] Embodiment 73. The method of embodiment 72, wherein said cancer comprises cancer cells that express CD38 and EpCAM.
[00457] Embodiment 74. The method of embodiment 73, wherein the ratio of EpCAM to CD38 on the surface of said cancer cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
[00458] Embodiment 75. The method of embodiment 73 or 74, wherein said cancer cells that express CD38 and EpCAM are lysed.
[00459] Embodiment 76. The method of any one of embodiments 72-75, wherein said multispecific antibody induces antibody-dependent cellular cytotoxicity (ADCC) mediated killing of said cancer cells that express CD38 and EpCAM.
[00460] Embodiment 77. The method of any one of embodiments 72-76, wherein said multispecific antibody induces complement-dependent cytotoxicity (CDC) mediated killing of said cancer cells that express CD38 and EpCAM.
[00461] Embodiment 78. The method of any one of embodiments 72-77, wherein the cancer is a solid tumor.
[00462] Embodiment 79. The method of embodiment 78, wherein said cancer is a carcinoma. [00463] Embodiment 80. The method of embodiment 79, wherein said carcinoma is an adenocarcinoma.
[00464] Embodiment 81. The method of any one of embodiments 72-80, wherein said cancer is prostate cancer or pancreatic cancer.
[00465] Embodiment 82. The method of any one of embodiments 72-81, comprising administering to said subject an anti-cancer agent. [00466] Embodiment 83. The method of embodiment 82, wherein said anti-cancer agent is a chemotherapeutic agent or a biologic agent.
EXAMPLES
[00467] These examples are provided for illustrative purposes only and not to limit the scope of the claims provided herein.
EXAMPLE 1: Humanization of the anti-EpCAM Mab2
[00468] The VH and VL sequences were compared to a library of known human germline sequences from human VH genes and human VLkappa genes (IMGT® the international ImMunoGeneTics information system® www.imgt.org). The acceptor human germline was chosen from those closest in sequence to the parental antibody. For VH, human germline IGHV3-23 was chosen as the acceptor sequence. For VL, human germline IGKV1-39 was chosen as the acceptor sequence. Alteration of human germline framework (i.e., non-CDR residues in VH and VL) positions to corresponding parental murine sequence might be required to optimize binding of the humanized antibody. A list of humanized Mab2 variants were generated and evaluated for their bindings to EpCAM. Their sequences are shown in the Table 3 and Table 4.
EXAMPLE 2: Generation and characterization of bispecific anti-CD38/anti-EpCAM antibodies
[00469] The bispecific antibody format was constructed with one CD38 binding site and one EpCAM binding site in a three chain format. One antigen binding site is in a Fab format and the other antigen binding site is in a scFv format. The bispecific antibody incorporated knob-in-hole mutations in their Fc domains to form an asymmetric structure (FIG. 1).
[00470] The anti-CD38 BMK1 benchmark antibody has an amino acid sequence based on Daratumumab. The anti-EpCAM BMK2 benchmark antibody has an amino acid sequence based on the anti-EpCAM clone VB6-845 (Vicinium).
[00471] The amino acid sequences of the bispecific antibodies used in the following experiments: Anti-EpCAM x Anti-CD38 (SEQ ID NOS: 269-271), Anti-CD38 x Anti-EpCAM.BMK2 (SEQ ID NOS: 272-274), and Anti-CD38.BMK1 x Anti-EpCAM.BMK2 (SEQ ID NOS: 275, 276, and 274), are disclosed in Table 9.
[00472] The amino acid sequences of the monoclonal antibodies used in the following experiments: Anti-EpCAM. BMK2 (SEQ ID NOS: 277-278), Anti-EpCAM (SEQ ID NOS: 279-280), and Anti- CD38 (SEQ ID NOS: 281-282), are disclosed below in Table 11.
Table 11. Amino Acid Sequence of Exemplary Monoclonal Antibodies
Figure imgf000089_0001
Figure imgf000090_0001
EXAMPLE 3: Functional assays on bispecific anti-CD38/anti-EpCAM antibodies
Antibody-Dependent Cellular Cytotoxicity
[00473] To assay for antibody-dependent cellular cytotoxicity (ADCC), target cells were washed once with balanced salt solution or culture medium and cell numbers were adjusted to lxlO6 cells/ml. 2 pL of BATDA fluorescence enhancing ligand (Perkin Elmer, Cat# Cl 36- 100) was then added to each mL of cells and incubated for 20 min at 37 °C in a cell incubator. After incubation, cells were centrifuged, culture medium was aspirated. The labeled cells were washed 4 times with PBS. After the final wash, cells were re-suspended in culture medium and adjusted to 5 x 104 cell /ml. 200 pL cell suspension was then added to each well of the 96-well plate to make the cell number per well to lx 104. Background release was determined by withdrawing an aliquot of the labeled target cells, centrifuge and supernatant was transferred into an empty well. The reading was background release. lxlO4 labeled target cells were transferred to sterile 96-well assay plate. Antibodies were serially diluted with RPMI-1640 containing 10% FBS. 50 pL of serially-diluted antibodies were added to assay plate containing target cell and incubated at 37 °C, 5% C02 for 5-10min. Freshly isolated PBMC were harvested and suspended in RPMI-1640 containing 10% FBS. 50 ul/well effector cells were added to each well of assay plate at different ET ratio. Set up controls: target spontaneous (target cell+100 pL medium); target maximum (target cell+100 pL medium+10 pL lysis buffer); background (100 pL the labeled target cell supernatant and 100 pL dilution medium). The plates were incubated in a humidified 5 % CO2 atmosphere at 37 °C for 2 hours. At the end of incubation, 10 pL of Lysis Buffer (Perkin Elmer, Cat# 4005-0010) was added to the maximum release well. The plates were centrifuged for 5 min at 500g. 20 pL of the supernatant from each well was transferred to a flat- bottom detection plate. 200 pL of Europium Solution (Perkin Elmer, Cat# 035-100) was then added to each well of the detection plate. The plate was shaken at 250 rpm for 15 min at room temperature and the fluorescence was then measured in a time-resolved fluorometer within 5 hrs.
[00474] The ADCC activity of bispecific anti-CD38/EpCAM antibodies was determined on human prostate cancer cell DU145 (FIG. 2 and FIG. 4) and human pancreas cell CFPAC-1 (FIG. 3). The DU145 and CFPAC-1 cell lines express very low level of CD38 on cell surface. The anti-CD38 antibodies showed no activity on both cells (FIGS. 2-4). The CD38/EpCAM bispecific antibodies showed higher ADCC activity than the monovalent anti-EpCAM antibodies (FIGS. 2-4).
[00475] While preferred embodiments of the present invention have been shown and described herein, it will be obvious to those skilled in the art that such embodiments are provided by way of example only. It is not intended that the invention be limited by the specific examples provided within the specification. While the invention has been described with reference to the aforementioned specification, the descriptions and illustrations of the embodiments herein are not meant to be construed in a limiting sense. Numerous variations, changes, and substitutions will now occur to those skilled in the art without departing from the invention. Furthermore, it shall be understood that all aspects of the invention are not limited to the specific depictions, configurations or relative proportions set forth herein which depend upon a variety of conditions and variables. It should be understood that various alternatives to the embodiments of the invention described herein may be employed in practicing the invention. It is therefore contemplated that the invention shall also cover any such alternatives, modifications, variations or equivalents. It is intended that the following claims define the scope of the invention and that methods and structures within the scope of these claims and their equivalents be covered thereby.

Claims

What is claimed is:
1. A multispecific antibody that comprises a CD38 binding domain and an EpCAM binding domain.
2. The multispecific antibody of claim 1, wherein said multispecific antibody is bispecific, trispecific, or tetraspecific.
3. The multispecific antibody of claim 2, wherein said multispecific antibody is bispecific.
4. The multispecific antibody of claim 1, wherein said multispecific antibody is bivalent, tri valent, or tetravalent.
5. The multispecific antibody of claim 4, wherein said multispecific antibody is bivalent.
6. The multispecific antibody of claim 1, wherein said CD38 binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds CD38.
7. The multispecific antibody of claim 6, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a variable domain of an IgG heavy chain (HC) and a variable domain of an IgG light chain (LC).
8. The multispecific antibody of claim 7, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of said IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
9. The multispecific antibody of claim 8, wherein said variable domain of said IgG heavy chain of said CD38 binding domain comprises a variable domain of an IgGl heavy chain; and said variable domain of said IgG light chain of said CD38 binding domain comprises a variable domain of an IgGl light chain.
10. The multispecific antibody of claim 6, wherein said antibody, or functional fragment or functional variant thereof, of said CD38 binding domain comprises a scFv or a Fab.
11. The multispecific antibody of claim 7, wherein said variable domain of said IgG heavy chain (HC) of said CD38 binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein the HC-CDR1, the HC-CDR2, and the HC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1 : SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; b. HC-CDR1 : SEQ ID NO: 109; HC-CDR2: SEQ ID NO: 110; HC-CDR3 : SEQ ID NO: 111; and c. HC-CDR1 : SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3 : SEQ ID NO: 108.
12. The multispecific antibody of claim 7, wherein said variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions LC (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of said heavy chain variable domain comprise a set of sequences selected from the group consisting of the following set of sequences: a. LC-CDR1 : SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO:
166; b. LC-CDR1 : SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; LC-CDR3 : SEQ ID NO:
169; and c. LC-CDR1 : SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; LC-CDR3 : SEQ ID NO:
171.
13. The multispecific antibody of claim 7, said variable domain of said IgG light chain (LC) of said CD38 binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said CD38 binding domain comprises CDRs: HC-CDR1, HC-CDR2, and HC-CDR3, wherein said LC: LC- CDR1, LC-CDR2, and LC-CDR3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences are as set forth in any one of the following sets of sequences: a. HC-CDR1 : SEQ ID NO: 106; HC-CDR2: SEQ ID NO: 107; HC-CDR3 : SEQ ID NO: 108; LC-CDR1: SEQ ID NO: 164; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 166; b. HC-CDR1 : SEQ ID NO: 109; HC-CDR2: SEQ ID NO: 110; HC-CDR3 : SEQ ID NO: 111; LC-CDR1: SEQ ID NO: 167; LC-CDR2: SEQ ID NO: 168; and LC-CDR3: SEQ ID NO: 169; and c. HC-CDR1 : SEQ ID NO: 112; HC-CDR2: SEQ ID NO: 113; HC-CDR3 : SEQ ID NO: 108; LC-CDR1: SEQ ID NO: 170; LC-CDR2: SEQ ID NO: 165; and LC-CDR3 : SEQ ID NO: 172.
14. The multispecific antibody of claim 7, wherein said variable domain of an IgG heavy chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211-233.
15. The multispecific antibody of claim 7, wherein said variable domain of an IgG light chain of said CD38 binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234-269.
16. The multispecific antibody of claim 7, wherein said CD38 binding domain comprises a. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 211; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 233; or b. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 212; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 234.
17. The multispecific antibody of claim 1, wherein said EpCAM binding domain comprises an antibody, or functional fragment or functional variant thereof, that specifically binds EpCAM.
18. The multispecific antibody of claim 17, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a variable domain of an IgG heavy chain and a variable domain of an IgG light chain.
19. The multispecific antibody of claim 18, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 heavy chain; and said variable domain of an IgG light chain comprises a variable domain of an IgGl, IgG2, IgG3, or IgG4 light chain.
20. The multispecific antibody of claim 19, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises a variable domain of an IgGl heavy chain; and said variable domain of said IgG light chain of said EpCAM binding domain comprises a variable domain of an IgGl light chain.
21. The multispecific antibody of claim 17, wherein said antibody, or functional fragment or functional variant thereof, of said EpCAM binding domain comprises a scFv or a Fab.
22. The multispecific antibody of claim 18, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): HC-CDR1, HC-CDR2, and HC-CDR3, wherein said HC-CDR1, the HC-CDR2, and the HC-CDR3 of said variable heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a. HC-CDR1 : SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; and b. HC-CDR1 : SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6.
23. The multispecific antibody of claim 18, wherein said variable domain of said IgG light chain of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, wherein the LC-CDR1, the LC-CDR2, and the LC-CDR3 of the heavy chain comprise a set of sequences selected from the group consisting of the following set of sequences: a. LC-CDR1 : SEQ ID NO: 41; LC-CDR2: SEQ ID NO: 42; LC-CDR3 : SEQ ID NO: 43; and b. LC-CDR1 : SEQ ID NO: 44; LC-CDR2: SEQ ID NO: 45; LC-CDR3 : SEQ ID NO: 46.
24. The multispecific antibody of claim 18, said variable domain of said IgG light chain (LC) of said EpCAM binding domain comprises complementarity determining regions (CDRs): LC-CDR1, LC-CDR2, and LC-CDR3, and said variable domain of an IgG heavy chain (HC) of said EpCAM binding domain comprises complementarity determining regions HC-CDR1, HC-CDR2, and HC- CDR3, wherein said LC: LC-CDR1, LC-CDR2, and LC-CD3 sequences and said HC: HC-CDR1, HC-CDR2, and HC-CDR3 sequences comprise sequences with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to sequences as set forth in any one of the following sets of sequences: a. HC-CDR1 : SEQ ID NO: 1; HC-CDR2: SEQ ID NO: 2; HC-CDR3 : SEQ ID NO: 3; LC- CDR1: SEQ ID NO: 43; LC-CDR2: SEQ ID NO: 44; LC-CDR3 : SEQ ID NO: 45; and b. HC-CDR1 : SEQ ID NO: 4; HC-CDR2: SEQ ID NO: 5; HC-CDR3 : SEQ ID NO: 6; LC- CDR1: SEQ ID NO: 46; LC-CDR2: SEQ ID NO: 47; LC-CDR3 : SEQ ID NO: 48.
25. The multispecific antibody of claim 18, wherein said variable domain of said IgG heavy chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 76-91, 260-161.
26. The multispecific antibody of claim 18, wherein said variable domain of said IgG light chain of said EpCAM binding domain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to any one of SEQ ID NO: 92-105, 262-268.
27. The multispecific antibody of claim 18, wherein EpCAM binding domain comprises a. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 76; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 92; or b. a variable domain of an IgG heavy chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 77; and a variable domain of an IgG light chain comprises an amino acid sequence with at least 90%, 95%, 96%, 97%, 98%, 99%, or 100% identity to SEQ ID NO: 93.
28. The multispecific antibody of claim 1, further comprising an IgG hinge region, or a portion thereof.
29. The multispecific antibody of claim 28, wherein said IgG hinge region is C terminal to said CD38 binding domain or said EpCAM binding domain and N terminal to an Fc region.
30. The multispecific antibody of claim 1, further comprising an Fc region.
31. The multispecific antibody of claim 30, wherein said Fc region comprises an IgG CH2 domain and an IgG CH3 domain.
32. The multispecific antibody of claim 30, wherein said Fc region comprises a heterodimeric Fc region.
33. The multispecific antibody of claim 30, wherein said Fc region comprises at least one amino acid modification that increases the half-life of the multispecific antibody.
34. The multispecific antibody of claim 30, wherein said Fc region comprises at least one amino acid modification that modulates its interaction with an Fc receptor.
35. The multispecific antibody of claim 30, wherein said Fc region comprises at least one amino acid modification that increases binding of said Fc region to an Fc receptor.
36. The multispecific antibody of claim 30, wherein said Fc region comprises at least one amino acid modification that decreases glycosylation of the Fc region.
37. The multispecific antibody of claim 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region is an amino acid substitution, deletion, or addition, or a combination thereof.
38. The multispecific antibody of claim 37, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution.
39. The multispecific antibody of claim 36, wherein said at least one amino acid modification that decreases glycosylation of the Fc region comprises an amino acid substitution at a position corresponding to position N297 of human IgGl, wherein the numbering is according to the EU index of Kabat.
40. The multispecific antibody of claim 30, wherein said Fc region is afucosylated.
41. The multispecific antibody of claim 30, wherein said Fc region comprises at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC).
42. The multispecific antibody of claim 41, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC)is an amino acid substitution, deletion, or addition, or a combination thereof.
43. The multispecific antibody of claim 42, wherein said at least one amino acid modification that increases antibody-dependent cellular cytotoxicity (ADCC) comprises an amino acid substitution.
44. The multispecific antibody of claim 43, wherein said Fc region comprises at least one mutation that increases antibody-dependent cellular cytotoxicity (ADCC), wherein said at least one mutation that increases ADCC comprises an amino acid substitution at positions corresponding to positions S239, 1332, and A330 of human IgGl, wherein the amino acid numbering is according to the EU index according to Kabat et al.
45. The multispecific antibody of claim 44, wherein said amino acid substitutions are S239D, I332E, and A330L, wherein the amino acid numbering is according to the EU index according to Kabat et al.
46. The multispecific antibody of claim 32, comprising said heterodimeric Fc region, wherein said heterodimeric Fc region comprises a knob chain and a hole chain, forming a knob-in-hole (KIH) structure.
47. The multispecific antibody of claim 46, wherein said knob chain comprises an amino acid substitution at a position corresponding to T366 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
48. The multispecific antibody of claim 47, wherein said T366 substitution comprises a T336W mutation, wherein amino acid position numbering is according to the EU index according to Kabat et al.
49. The multispecific antibody of claim 46, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, or Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
50. The multispecific antibody of claim 49, wherein said hole chain comprises an amino acid substitution at a position corresponding to T366, L368, and Y407 of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
51. The multispecific antibody of claim 49, wherein said T366, L368, or Y407 amino acid substitutions comprise a T366S, L368A, or Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
52. The multispecific antibody of claim 50, wherein said T366, L368, and Y407 amino acid substitutions comprises a T366S, L368A, and Y407V of IgGl, wherein amino acid position numbering is according to the EU index according to Kabat et al.
53. The multispecific antibody of claim 1, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cell relative to a monospecific control antibody that comprises said CD38 binding domain but lacks an EpCAM binding domain, as determined by surface plasmon resonance.
54. The multispecific antibody of claim 1, wherein said multispecific antibody binds to a target cell that expresses CD38 and EpCAM on the cell surface with a higher affinity relative to that of a monospecific control antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain, as determined by surface plasmon resonance.
55. The multispecific antibody of claim 1, wherein said multispecific antibody induces enhanced antibody-dependent cellular cytotoxicity (ADCC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to ADCC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
56. The multispecific antibody of claim 55, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more ADCC mediated lysis than said control monospecific antibody.
57. The multispecific antibody of claim 1, wherein said multispecific antibody induces enhanced complement-dependent cytotoxicity (CDC) mediated lysis of a population of target cells that express CD38 and EpCAM on the cell surface relative to CDC mediated lysis on a comparable population of target cells by a control monospecific antibody that comprises only one of said CD38 binding domain or said EpCAM binding domain.
58. The multispecific antibody of claim 57, wherein said multispecific antibody induces at least 5%, 10%, 15%, 20%, 25%, 30%, 25%, 40%, 45%, or 50% more CDC mediated lysis than said control monospecific antibody.
59. The multispecific antibody of claim 53, wherein said target cell or population of target cells express a lower level of CD38 relative to EpCAM on the surface of said target cell.
60. The multispecific antibody of claim 53, wherein the ratio of EpCAM to CD38 on the cell surface of said target cell or population of target cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
61. The multispecific antibody of claim 53, wherein the ratio of EpCAM to CD38 on the surface of said target cell or population of target cells is greater than or equal to the ratio of EpCAM to CD38 on the surface of a DU145 cell or a CFPAC-1 cell.
62. The multispecific antibody of claim 53, wherein said target cell or population of target cells comprises a cancer cell.
63. The multispecific antibody of claim 62, wherein said cancer is an epithelial cell.
64. The multispecific antibody of claim 1, wherein said multispecific antibody has a higher affinity for CD38 expressed on the surface of a target cancer cell than for CD38 expressed on the surface of a comparable non-cancer cell, as determined by surface plasmon resonance.
65. The multispecific antibody of claim 63, wherein EpCAM is expressed on the surface of said target cancer cell.
66. The multispecific antibody of claim 63, wherein EpCAM is not expressed on the surface of said comparable non-cancer cell.
67. The multispecific antibody of claim 63, wherein said cancer cell is an epithelial cell.
68. A nucleic acid molecule encoding the multispecific antibody of claim 1.
69. A vector comprising the nucleic acid molecule of claim 68.
70. A pharmaceutical composition comprising the multispecific antibody of claim 1.
71. The pharmaceutical composition of claim 70, further comprising a pharmaceutically acceptable carrier, an excipient, or any combinations thereof.
72. A method of treating a subject having cancer, said method comprising: administering to said subject the multispecific antibody of claim 1.
73. The method of claim 72, wherein said cancer comprises cancer cells that express CD38 and EpCAM.
74. The method of claim 73, wherein the ratio of EpCAM to CD38 on the surface of said cancer cells is at least about 1, 1.5, 2.0, 2.5, 5, 10, 15, 20, 50, 100, or 200.
75. The method of claim 73, wherein said cancer cells that express CD38 and EpCAM are lysed.
76. The method of claim 72, wherein said multispecific antibody induces antibody-dependent cellular cytotoxicity (ADCC) mediated killing of said cancer cells that express CD38 and EpCAM.
77. The method of claim 72, wherein said multispecific antibody induces complement- dependent cytotoxicity (CDC) mediated killing of said cancer cells that express CD38 and EpCAM.
78. The method of claim 72, wherein the cancer is a solid tumor.
79. The method of claim 78, wherein said cancer is a carcinoma.
80. The method of claim 79, wherein said carcinoma is an adenocarcinoma.
81. The method of claim 72, wherein said cancer is prostate cancer or pancreatic cancer.
82. The method of claim 72, comprising administering to said subject an anti-cancer agent.
83. The method of claim 82, wherein said anti-cancer agent is a chemotherapeutic agent or a biologic agent.
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