多杀菌素衍生物作为精氨酸代琥珀酸合成酶激活剂及其应用Spinosyn derivatives as arginine succinate synthase activator and application thereof
技术领域Technical field
本发明涉及多杀菌素A(Spinosyn A)及其衍生物可调节激活精氨酸代琥珀酸合成酶(Argininosuccinate synthetase 1,ASS1)。该类化合物可作为氨酸代琥珀酸合成酶缺陷相关疾病的治疗,如抗肿瘤、瓜氨酸血症,属于医药领域。The present invention relates to spinosyn A (Spinosyn A) and its derivatives which can regulate and activate Argininosuccinate synthetase (Argininosuccinate synthesis 1, ASS1). Such compounds can be used as treatments for diseases related to succinate synthase deficiency, such as anti-tumor and citrullinemia, and belong to the field of medicine.
背景技术Background technique
精氨酸代琥珀酸合成酶(Argininosuccinate synthase,ASS1;EC 6.3.4.5)首先在肝脏中发现,后来在哺乳动物中被认为是普遍存在的酶。ASS1基因位于染色体9q34.11,基因长度为56kb,开放阅读框长度1239bp,带有16个外显子,编码412个氨基酸,分子量为46kDa。ASS1催化瓜氨酸和天冬氨酸在ATP功能的条件下生成精氨酸代琥珀酸,该化合物在精氨酸代琥珀酸裂解酶的作用下进一步分解为精氨酸和延胡索酸,其中,精氨酸进一步进入尿素循环或用于蛋白质合成等代谢过程。其中尿素循环可以将有毒的氨转化为无毒的尿素排出体外,是体内解氨毒的主要途径。如果ASS1表达下调或突变,其酶催化活性下降或者缺乏,将使尿素循环受阻,出现瓜氨酸水平上升。精氨酸代琥珀酸合成酶(是尿素循环关键酶(见图2)。同时,天冬氨酸是ASS1的关键底物之一,ASS1表达量的高低及其活性将决定用于尿循环中的天冬氨酸利用度。ASS1低表达将限制天冬氨酸的利用。Argininosuccinate synthase (Argininosuccinate synthase, ASS1; EC 6.3.4.5) was first found in the liver, and was later considered to be a ubiquitous enzyme in mammals. The ASS1 gene is located on chromosome 9q34.11, the gene length is 56kb, the open reading frame length is 1239bp, with 16 exons, it encodes 412 amino acids, and the molecular weight is 46kDa. ASS1 catalyzes citrulline and aspartic acid to produce arginine succinate under the condition of ATP function. The compound is further decomposed into arginine and fumaric acid under the action of arginine succinate lyase. Among them, arginine Amino acid further enters the urea cycle or is used in metabolic processes such as protein synthesis. Among them, the urea cycle can convert toxic ammonia into non-toxic urea to be excreted from the body, which is the main way to detoxify ammonia in the body. If ASS1 expression is down-regulated or mutated, its enzyme catalytic activity decreases or lacks, which will block the urea cycle and increase the level of citrulline. Arginine succinate synthase (is a key enzyme of the urea cycle (see Figure 2). At the same time, aspartic acid is one of the key substrates of ASS1, and the level of ASS1 expression and its activity will determine its use in the urine cycle. The utilization of aspartic acid. Low expression of ASS1 will limit the utilization of aspartic acid.
瓜氨酸血症(Citrullinemia,CTLN)是一种常染色体隐性遗传的尿素循环障碍疾病,临床表现上主要为瓜氨酸增加和高氨血症,根据发病机制的不同分为Ⅰ型和Ⅱ型。Ⅰ型瓜氨酸血症(Citrullinemia type 1,CTLN 1),是由于ASS1基因缺陷导致的,发病率约为1/250,000,是第三大尿素循环障碍;Ⅱ型瓜氨酸血症(Citrullinemia type 2,CTLN 2)是由于Citrin基因突变所致。CTLN1在临床表现上主要为高氨血症的毒性现象,由发病时间及疾病的严重程度分为经典型和迟发型。经典型瓜氨酸血症于新生儿期发病,表现为高氨血症伴随着神经系统功能衰退,预后差,死亡率高;迟发型瓜氨酸血症则发病较晚,症状较轻,患者可能表现出反复出现的神经症状,如嗜睡、智力障碍等,有部分患者没有症状,只有在新生儿筛查中检测到的生化表型。Citrullinemia (Citrullinemia, CTLN) is an autosomal recessive inherited disorder of the urea cycle. The main clinical manifestations are increased citrullinemia and hyperammonemia. According to the different pathogenesis, it is divided into type Ⅰ and Ⅱ type. Citrullinemia type I (Citrullinemia type 1, CTLN 1) is caused by ASS1 gene defect, with an incidence rate of about 1/250,000, which is the third largest urea cycle disorder; type II citrullinemia (Citrullinemia type 1) 2. CTLN 2) It is caused by the mutation of Citrin gene. CTLN1 is mainly a toxic phenomenon of hyperammonemia in clinical manifestations. It is divided into classic type and delayed type according to the time of onset and the severity of the disease. Typical citrullinemia occurs in the neonatal period, which is characterized by hyperammonemia accompanied by neurological function decline, poor prognosis, and high mortality; delayed-onset citrullinemia has a later onset and mild symptoms. May exhibit recurring neurological symptoms, such as drowsiness, mental retardation, etc. Some patients have no symptoms and only the biochemical phenotype detected during newborn screening.
导致CTLN1的精氨酸琥珀酸合成酶基因缺陷的突变有很多,目前已被报道的突变有137种,主要是错义突变,另外也有少数病例出现无义突变、异常剪接及缺失突变。前八种最常出现的突变类型为p.Gly390Arg、p.Trp179Arg、p.Gly362Val、p.Arg363Trp、p.Gly324Ser、p.Arg157His、p.Arg304Trp以及p.Val263Met,分别对应出现在124、27、24、17、16、14、13、以及12个病例中。有研究通过构建体外表达载体的方式体外表达了部分突变型ASS1并检测其酶活性,在突变率最高的前八位突变中,突变p.Gly390Arg、p.Arg157His、p.Gly324Ser在体外实验中表现为完全失活,而突变p.Trp179Arg、p.Val263Met、p.Gly362Val在体外仍保留有部分酶活性。这个结果与其他报道携带这些突变的患者的临床表现基本一致。但目前为止还没有明确Ⅰ型瓜氨酸血症基因型与表型之间的相关性。有报道部分患者直到处于高分解代谢状态(手术期间和术后、产后或发烧)时才产生严重的高氨血症。There are many mutations that cause defects in the arginine succinate synthase gene of CTLN1. There are 137 mutations that have been reported, mainly missense mutations. In addition, a few cases have nonsense mutations, abnormal splicing and deletion mutations. The first eight most frequently occurring mutation types are p.Gly390Arg, p.Trp179Arg, p.Gly362Val, p.Arg363Trp, p.Gly324Ser, p.Arg157His, p.Arg304Trp, and p.Val263Met, corresponding to 124, 27, and p.Val263Met. 24, 17, 16, 14, 13, and 12 cases. Some studies have expressed partial mutant ASS1 in vitro by constructing an in vitro expression vector and tested its enzyme activity. Among the first eight mutations with the highest mutation rate, the mutations p.Gly390Arg, p.Arg157His, and p.Gly324Ser were shown in in vitro experiments. For complete inactivation, the mutant p.Trp179Arg, p.Val263Met, and p.Gly362Val still retain partial enzyme activity in vitro. This result is basically consistent with other reports of clinical manifestations of patients with these mutations. But so far, the correlation between the genotype and phenotype of type I citrullinemia has not been clarified. It has been reported that some patients do not develop severe hyperammonemia until they are in a high catabolic state (during and postoperative, postpartum or fever).
瓜氨酸血症是一种染色体异常的疾病,目前是没有根治的方法,治疗上主要是低蛋白饮食,降血氨治疗,如果症状比较严重,或者血氨过高,则要依靠血液或是腹腔透析治疗。因此发明治疗瓜氨酸血症 的药物有十分重要的临床价值。Citrullinemia is a disease of chromosomal abnormalities. There is currently no cure. The treatment is mainly low-protein diet and blood ammonia-lowering treatment. If the symptoms are more serious or the blood ammonia is too high, it depends on blood or Abdominal dialysis treatment. Therefore, the invention of drugs for the treatment of citrullinemia has very important clinical value.
肿瘤细胞增殖速度快,需要更多的能量和营养物质,包括核苷酸、蛋白质、脂质等。CAD[氨甲酰磷酸合成酶Ⅱ(Carbamoylphosphate synthetaseⅡ,CPSase)、天冬氨酸转氨甲酰酶(Aspartate transcarbamoylase,ATCase)和二氢乳清酸脱氢酶(Dihydroorotate hydrogenase,DHOase)]是嘧啶类核苷酸从头合成的关键限速酶。嘧啶类核苷酸从头生物合成如下所述:谷氨酰胺、二氧化碳在胞液中由ATP供能,氨基甲酰磷酸合成酶Ⅱ催化下,生成氨基甲酰磷酸。后者又在天冬氨酸转氨甲酰酶催化下,将氨基甲酰基转移到天冬氨酸的氨基上生成氨甲酰天冬氨酸。氨甲酰天冬氨酸脱水环化,生成二氢乳清酸,再脱氢即成乳清酸。乳清酸是嘧啶类核苷酸的必需前体。由此可知,天冬氨酸也是CAD的关键底物。肿瘤细胞异常增殖,就必须有更多的天冬氨酸参与合成核苷酸。Tumor cells proliferate fast and require more energy and nutrients, including nucleotides, proteins, lipids, etc. CAD [Carbamoylphosphate synthetase II (CPSase), Aspartate transcarbamoylase (ATCase) and Dihydroorotate hydrogenase (DHOase)] are pyrimidines The key rate-limiting enzyme for de novo nucleotide synthesis. The de novo biosynthesis of pyrimidine nucleotides is as follows: glutamine and carbon dioxide are powered by ATP in the cytosol, and carbamoyl phosphate synthase II is catalyzed to generate carbamoyl phosphate. The latter is catalyzed by aspartate transcarbamylase to transfer the carbamoyl group to the amino group of aspartic acid to generate carbamoyl aspartic acid. Carbamyl aspartic acid is dehydrated and cyclized to produce dihydroorotic acid, which is then dehydrogenated to form orotic acid. Orotic acid is an essential precursor of pyrimidine nucleotides. It can be seen that aspartic acid is also a key substrate of CAD. If tumor cells proliferate abnormally, more aspartic acid must be involved in the synthesis of nucleotides.
天冬氨酸含有两个羧基,极性大,食物等外源性天冬氨酸酸很难进入细胞中,细胞内的天冬氨酸的来源依赖于其内源性生物合成。天冬氨酸的分解代谢途径决定其在细胞内作用和功能。天冬氨酸是ASS1和CAD共同的底物,因此,ASS1和CAD二者竞争性利用天冬氨酸。Aspartic acid contains two carboxyl groups and is highly polar. It is difficult for exogenous aspartic acid such as food to enter cells. The source of intracellular aspartic acid depends on its endogenous biosynthesis. The catabolic pathway of aspartic acid determines its role and function in cells. Aspartic acid is the common substrate of ASS1 and CAD, therefore, both ASS1 and CAD use aspartic acid competitively.
如果肿瘤细胞ASS1的下调或者缺陷,这导致其底物天冬氨酸的更多地用于嘧啶类核苷酸合成,促进细胞增殖。ASS1与肿瘤生长紧密相关,在一些肿瘤中,ASS1表达下调或存在缺陷,包括乳腺癌、黑素瘤、肝细胞癌、前列腺癌、膀胱癌、间皮瘤,卵巢癌、肾癌、胰腺恶性肿瘤、鼻咽癌、骨肉瘤和粘液纤维肉瘤等。ASS1缺陷与癌症预后不良之间存在明显相关性,被认为是抑癌蛋白,提示ASS1在多种肿瘤中表现为抑癌功能,特别在ASS1缺陷的肿瘤中,激活ASS1可以抑制经天冬氨酸途径合成肿瘤细胞增殖必需的嘧啶核苷酸。因此,我们认为ASS1蛋白可以成为潜在的抗肿瘤药物直接作用靶点。迄今为止,没有任何文献公开报道可以调节ASS1活性的化学小分子。If the tumor cell ASS1 is down-regulated or defective, it will lead to more use of its substrate aspartic acid for the synthesis of pyrimidine nucleotides and promote cell proliferation. ASS1 is closely related to tumor growth. In some tumors, ASS1 expression is down-regulated or defective, including breast cancer, melanoma, hepatocellular carcinoma, prostate cancer, bladder cancer, mesothelioma, ovarian cancer, kidney cancer, and pancreatic malignancies , Nasopharyngeal carcinoma, osteosarcoma and myxofibrosarcoma. There is an obvious correlation between ASS1 deficiency and poor prognosis of cancer. It is considered to be a tumor suppressor protein, which suggests that ASS1 has a tumor suppressor function in a variety of tumors. Especially in ASS1-deficient tumors, activating ASS1 can inhibit aspartic acid Pathway to synthesize pyrimidine nucleotides necessary for tumor cell proliferation. Therefore, we believe that ASS1 protein can become a potential direct target of anti-tumor drugs. So far, there is no public report in the literature about small chemical molecules that can modulate the activity of ASS1.
多杀菌素Spinosyn是土壤刺糖多胞菌(Saccharoplyspora spinosa)经过有氧发酵所产生的胞内次级代谢产物,是大环内酯类抗生素,具有杀虫活性。多杀菌素商品名为Spinosad(SP),其主要活性成分A(Spinosyn A,SPA,85-90%)和D(Spinosyn D,10-15%),Spinosyn包含一个独特的四环结构,连接着两个不同的六元糖。SP作为广谱的生物农药,主要防治鳞翅目、缨翅目害虫。哺乳动物的慢性毒性实验表明,SP无致癌、致畸、致突变性或神经毒性,急性毒性试验表明,对哺乳动物的毒性低(老鼠口服(mg/kg)LD50=3783-5000;老鼠皮肤(mg/kg)LD50>2000)。Spinosyn is an intracellular secondary metabolite produced by Saccharoplyspora spinosa through aerobic fermentation. It is a macrolide antibiotic with insecticidal activity. Spinosyn is traded under the name Spinosad (SP), and its main active ingredients are A (Spinosyn A, SPA, 85-90%) and D (Spinosyn D, 10-15%). Spinosyn contains a unique four-ring structure that connects Two different six-membered sugars. As a broad-spectrum biological pesticide, SP mainly controls Lepidoptera and Thysanoptera pests. The chronic toxicity test in mammals shows that SP has no carcinogenic, teratogenic, mutagenic or neurotoxicity, and the acute toxicity test shows that it has low toxicity to mammals (mice oral (mg/kg) LD50=3783-5000; mouse skin ( mg/kg)LD50>2000).
本发明公开了多杀菌素衍生物作为ASS1激活剂,可以激活ASS1和突变ASS1
G362V酶活性,用于治疗ASS1缺陷相关的疾病的药物中,特别是瓜氨酸血症、抗肿瘤。
The present invention discloses spinosyn derivatives as ASS1 activators, which can activate ASS1 and mutant ASS1 G362V enzyme activities, and are used in drugs for treating diseases related to ASS1 deficiency, especially citrullinemia and anti-tumor.
发明内容Summary of the invention
本发明解决的技术问题是,提供一类化合物新用途,该化合物属于多杀菌素衍生物,可作为精氨酸代琥珀酸合成酶(ASS1)激活剂。The technical problem solved by the present invention is to provide a new use of a class of compounds, which belong to spinosyn derivatives and can be used as arginine succinate synthase (ASS1) activators.
本发明的技术方案是,提供一种多杀菌素衍生物及其在医学上可接受的盐作为精氨酸代琥珀酸合成酶(ASS1)激活剂的应用,所述多杀菌素衍生物具有结构通式(I):The technical solution of the present invention is to provide a spinosyn derivative and a medically acceptable salt thereof as an activator of arginine succinate synthase (ASS1). The spinosyn derivative has a structure General formula (I):
其中,R1选自下列II-Ⅷ基团:Wherein, R1 is selected from the following II-Ⅷ groups:
R8、R9均独立地选自氢、1-20个碳原子的烷基(优选2-16个碳原子的烷基,更优选2-10个碳原子的烷基)、1-20个碳的卤代烷基(优选2-16个碳的卤代烷基,更优选2-10个碳的卤代烷基)、1-6个碳烷基胺基取代的1-10个碳原子烷基(优选2-6个碳原子的烷基)、酰氧基取代的1-10个碳原子的羟烷基(优选2-6个碳原子的羟烷基)、芳甲基、磷酰基、1-10个碳原子的烷酰基(优选2-6个碳原子的烷酰基)、芳酰基、、
其中,J选自卤原子、R19R20N-、四氢吡咯基、哌啶基、吗啉基、哌嗪基、
其中R16选自氢、1-10个碳的烷基(优选1-6个碳原子的烷基);
R8 and R9 are all independently selected from hydrogen, 1-20 carbon atoms (preferably 2-16 carbon atoms, more preferably 2-10 carbon atoms), 1-20 carbon atoms Haloalkyl (preferably 2-16 carbon haloalkyl, more preferably 2-10 carbon haloalkyl), 1-10 carbon atom alkyl substituted by 1-6 carbon alkylamino group (preferably 2-6 Alkyl with carbon atoms), hydroxyalkyl with 1-10 carbon atoms substituted by acyloxy (preferably hydroxyalkyl with 2-6 carbon atoms), arylmethyl, phosphoryl, 1-10 carbon atoms Alkanoyl (preferably alkanoyl with 2-6 carbon atoms), aroyl, Wherein, J is selected from halogen atoms, R19R20N-, tetrahydropyrrolyl, piperidinyl, morpholinyl, piperazinyl, Wherein R16 is selected from hydrogen, an alkyl group of 1-10 carbon atoms (preferably an alkyl group of 1-6 carbon atoms);
R10、R11、R12均独立地选自氢、1-20个碳的烷基(优选2-16个碳原子的烷基)、1-20个碳的烷烯基(优选2-16个碳原子的烷烯基,更优选2-10个碳原子的烷烯基)、芳甲基;R10, R11, and R12 are all independently selected from hydrogen, 1-20 carbon alkyl group (preferably 2-16 carbon atom alkyl group), 1-20 carbon alkenyl group (preferably 2-16 carbon atom Alkenyl, more preferably alkenyl with 2-10 carbon atoms), arylmethyl;
R13选自氢、R14R15N-、含氮杂环、含氧杂环、含硫杂环、含磷杂环;R13 is selected from hydrogen, R14R15N-, nitrogen-containing heterocycle, oxygen-containing heterocycle, sulfur-containing heterocycle, and phosphorus-containing heterocycle;
R14、R15、R19、R20均独立地选自氢、1-6个碳原子的烷基、胺基取代的1-10个碳原子的烷基;R14, R15, R19, and R20 are all independently selected from hydrogen, an alkyl group of 1 to 6 carbon atoms, and an alkyl group of 1 to 10 carbon atoms substituted by an amino group;
R2选自乙基、丙基、丁基、3-4个碳的烯基;R2 is selected from ethyl, propyl, butyl, 3-4 carbon alkenyl;
R3选自氢、甲基;R3 is selected from hydrogen and methyl;
R4选自氢、羟胺基、-S-R17;其中,R17选自氢、1-6个碳的取代烷基、1-6个碳的烯基、芳甲基、芳基、-(CH
2)qCH
2YR18;在-(CH
2)qCH
2YR18中,R18选自H、1-6个碳烷基、芳酰基,取代芳酰基、芳 基胺基甲酰基、芳香杂环酰基、1-5碳烷基酰基、芳基烷酰基、N,N-取代氨基甲酰基、烷氧基甲酰基,Y为氧或氮原子,-q=1,2或3;
R4 is selected from hydrogen, hydroxylamino, -S-R17; wherein, R17 is selected from hydrogen, substituted alkyl with 1-6 carbons, alkenyl with 1-6 carbons, arylmethyl, aryl, -(CH 2 )qCH 2 YR18; In -(CH 2 )qCH 2 YR18, R18 is selected from H, 1-6 carbon alkyl, aroyl, substituted aroyl, arylcarbamoyl, aromatic heterocyclic acyl, 1- 5-carbon alkyl acyl, arylalkanoyl, N,N-substituted carbamoyl, alkoxyformyl, Y is an oxygen or nitrogen atom, -q=1, 2, or 3;
R5、R6、R7均独立地选自氢、1-3个碳的烷基、乙酰基、丙酰基;R5, R6, and R7 are all independently selected from hydrogen, 1-3 carbon alkyl, acetyl, propionyl;
R21选自
A-B选自CH
2-CH
2、CH=CH;
R21 is selected from AB is selected from CH 2 -CH 2 , CH=CH;
M-Q选自CH-CH、C=CH;M-Q is selected from CH-CH, C=CH;
W选自CH
2、O、NH、S;
W is selected from CH 2 , O, NH, S;
X为阴离子;X is an anion;
X为阴离子,氯、溴、碘、硫酸根、硫酸氢根、磷酸根、甲磺酸根、苯磺酸根、对甲苯磺酸根、氢氧根;X is an anion, chlorine, bromine, iodine, sulfate, hydrogen sulfate, phosphate, methanesulfonate, benzenesulfonate, p-toluenesulfonate, hydroxide;
n为0-4的整数,m为0-20的整数。n is an integer of 0-4, and m is an integer of 0-20.
进一步地,所述R2为乙基。Further, the R2 is ethyl.
进一步地,所述R4为氢。Further, the R4 is hydrogen.
进一步地,所述R5、R6、R7均独立地选自甲基或乙基。Further, the R5, R6, and R7 are all independently selected from methyl or ethyl.
进一步地,所述W选自O、NH、NCH
3、S。
Further, the W is selected from O, NH, NCH 3 , and S.
进一步地,所述含氮杂环、含氧杂环、含硫杂环、含磷杂环分别是指杂环中的杂原子分别为氮、氧、硫、磷。Further, the nitrogen-containing heterocycle, oxygen-containing heterocycle, sulfur-containing heterocycle, and phosphorus-containing heterocycle respectively mean that the heteroatoms in the heterocycle are nitrogen, oxygen, sulfur, and phosphorus.
进一步地,所述含氮杂环中的杂原子为氮原子,数量为1-3个。Further, the heteroatoms in the nitrogen-containing heterocycle are nitrogen atoms, and the number is 1-3.
进一步地,所述含氮杂环为四氢吡咯基、哌啶基、吗啉基、哌嗪基、
其中R16选自1-10个碳的烷基。
Further, the nitrogen-containing heterocyclic ring is tetrahydropyrrolyl, piperidinyl, morpholinyl, piperazinyl, Wherein R16 is selected from alkyl groups of 1-10 carbons.
进一步地,所述多杀菌衍生物具有结构:Further, the spinosad derivative has the structure:
本发明涉及通式(I)所述化合物,其特征在于专利CN201610355188.0,ZL201010123056.8,CN201610356840.0及US6001981所涉及的多杀菌素及其衍生物。The present invention relates to the compound of general formula (I), which is characterized by spinosyns and derivatives thereof involved in patents CN201610355188.0, ZL201010123056.8, CN201610356840.0 and US6001981.
另外,本发明还提供了包含结构通式(I)所示的小分子组合物作为精氨酸代琥珀酸合成酶的应用,所述小分子组合物除了包含结构通式(I)所示的化合物,还可以包含一种或多种药物上可接受的载体或赋形剂In addition, the present invention also provides the application of the small molecule composition comprising the general formula (I) as an arginine succinate synthetase. The compound may also contain one or more pharmaceutically acceptable carriers or excipients
本发明所述的该药物组合物中包含结构通式(I)所示的多杀菌素及其衍生物,还可以包含一种或多种药物上可接受的载体或赋形剂。The pharmaceutical composition of the present invention contains spinosyn and its derivatives represented by the general structural formula (I), and may also contain one or more pharmaceutically acceptable carriers or excipients.
所述载体或赋形剂可以包含甘油、乙醇、缓冲盐水、生理盐水及其组合。所述药物组合物还可以包含渗透促进剂、抗氧化剂等。The carrier or excipient may include glycerol, ethanol, buffered saline, physiological saline, and combinations thereof. The pharmaceutical composition may also include penetration enhancers, antioxidants, and the like.
另一方面,本发明提供如通式(I)所示多杀菌素及衍生物LM-2I在预防和治疗与ASS1低表达或突变型ASS1G362V相关疾病的应用。其中所ASS1低表达或突变型ASS1G362V相关疾病包括但不限于I型瓜氨酸血症和相关癌症。On the other hand, the present invention provides the use of spinosyn and its derivative LM-2I as represented by the general formula (I) in the prevention and treatment of diseases associated with low ASS1 expression or mutant ASS1G362V. Among them, ASS1 low expression or mutant ASS1G362V related diseases include but are not limited to type I citrullinemia and related cancers.
本发明通过利用生物素探针法鉴定小分子靶点,发现了结构通式(I)化合物作用靶点为ASS1。发明人合成和发现多杀菌素A-生物素探针,如Xn-03-17A(简写为17A),发现其具有良好的抗肿瘤增殖活性,可以替代药物进行靶点实验。我们用Xn-03-17A进行靶点鉴定,结果显示多杀菌素衍生物的作用靶点为蛋白ASS1。并使用ASS1单克隆抗体进行Western blot分析并结合质谱鉴定确证为ASS1。The present invention uses the biotin probe method to identify small molecule targets, and finds that the target of the compound of the general structural formula (I) is ASS1. The inventors synthesized and discovered spinosyn A-biotin probes, such as Xn-03-17A (abbreviated as 17A), and found that it has good anti-tumor proliferation activity and can replace drugs for target experiments. We used Xn-03-17A for target identification, and the results showed that the target of spinosyn derivatives was the protein ASS1. The ASS1 monoclonal antibody was used for Western blot analysis and combined with mass spectrometry to confirm that it was ASS1.
本发明根据精氨酸代琥珀酸合成酶(ASS1)的活性测定原理和方法测定多杀菌素衍生物对ASS1的激活活性。ASS1活性检测原理是:ASS1催化瓜氨酸与天冬氨酸反应,生成精氨酸代琥珀酸,该反应会消耗ATP生成焦磷酸(PPi),生成的PPi在焦磷酸酶的催化作用下生产磷酸,磷酸与钼酸铵反应生成磷钼杂多酸,在维生素C的还原下生成蓝色的磷钼蓝,在OD660有特征吸收峰。结果显示,多杀菌素衍生物能够不同程度增加ASS1酶活性,与ASS1阳性对照相比,酶活性增幅为5.85-203.86%。The present invention determines the ASS1 activation activity of spinosyn derivatives according to the principle and method of arginine succinate synthetase (ASS1) activity measurement. The principle of ASS1 activity detection is: ASS1 catalyzes the reaction of citrulline and aspartic acid to produce arginine succinic acid. This reaction consumes ATP to generate pyrophosphate (PPi), and the generated PPi is produced under the catalysis of pyrophosphatase. Phosphoric acid, phosphoric acid reacts with ammonium molybdate to generate phosphomolybdenum heteropoly acid, which is reduced by vitamin C to generate blue phosphomolybdenum blue, which has a characteristic absorption peak at OD660. The results showed that spinosyn derivatives can increase the enzyme activity of ASS1 to varying degrees. Compared with the positive control of ASS1, the enzyme activity increased by 5.85-203.86%.
本发明采用MTT实验筛选了多杀菌素衍生物对多种人源性肿瘤细胞活性。ASS1低表达与乳腺癌患者的总生存率低、无病生存率低相关,ASS1是乳腺癌总生存率、无病生存率的独立预后因素,可作为乳腺癌的新型候选分子分型标记物。In the present invention, the MTT experiment is used to screen the activity of spinosyn derivatives on a variety of human tumor cells. The low expression of ASS1 is related to the low overall survival rate and low disease-free survival rate of breast cancer patients. ASS1 is an independent prognostic factor of breast cancer overall survival rate and disease-free survival rate, and can be used as a new candidate molecular marker for breast cancer.
本发明通过ASS1体外酶活实验发现多杀菌素及其衍生物LM-2I能够不同程度增加ASS1
G362V酶活性。
The present invention found that spinosyn and its derivative LM-2I can increase the ASS1 G362V enzyme activity to varying degrees through the ASS1 in vitro enzyme activity experiment.
本发明的有益效果:多杀菌素及其衍生物系首次发现的靶向抑癌蛋白精氨酸代琥珀酸合成酶1(ASS1)和I型瓜氨酸血症的突变型精氨酸代琥珀酸合成酶ASS1
G362V的一类激活剂,由于ASS1在肿瘤中普遍表达下调或存在缺陷,因而多杀菌素及其衍生物的广泛抗肿瘤疗效显著。同时对于因ASS1基因突变ASS1
G362V所导致的难以治愈的先天性遗传病—I型瓜氨酸血症,多杀菌素及其衍生物亦可以作为孤儿药通过逆转并恢复ASS1
G362V功能活性发挥明显疗效。多杀菌素及其衍生物主要作为治疗ASS1缺陷相关的疾病的药物,特别是用于I型瓜氨酸血症和抗肿瘤治疗。
The beneficial effects of the present invention: Spinosyn and its derivatives are the first discovered mutant arginine succinate targeting the tumor suppressor protein arginine succinate synthase 1 (ASS1) and type I citrullinemia A type of activator of acid synthase ASS1 G362V . Because ASS1 is generally down-regulated or defective in tumors, spinosyn and its derivatives have significant anti-tumor effects. While for congenital genetic diseases due -I citrullinemia type ASS1 ASS1 G362V mutation resulting difficult to cure, spinosyn and derivatives thereof can also be used as orphan drugs by reversing and restoring functional activity ASS1 G362V play a significant effect . Spinosyn and its derivatives are mainly used as drugs for the treatment of diseases related to ASS1 deficiency, especially for type I citrullinemia and anti-tumor therapy.
附图说明Description of the drawings
图1表示多杀菌素衍生物的结构通式;Figure 1 shows the general structural formula of spinosyn derivatives;
图2表示精氨酸代琥珀酸合酶1(ASS1)催化反应过程;Figure 2 shows the catalytic reaction process of arginine succinate synthase 1 (ASS1);
图3表示天冬氨酸代谢途径;Figure 3 shows the pathway of aspartic acid metabolism;
图4表示化合物作用靶点的鉴定;图中,1A)细胞裂解液中Pull-down产物银染结果;1B)ASS1抗体Western blot检测图;Figure 4 shows the identification of the target of the compound; in the figure, 1A) Silver staining result of Pull-down product in cell lysate; 1B) Western blot detection of ASS1 antibody;
图5表示质谱鉴定探针Biotin-SPA结合的蛋白为ASS1;Figure 5 shows the mass spectrometry identification probe Biotin-SPA bound protein as ASS1;
图6表示不同化合物对ASS1的催化相对活性;Figure 6 shows the relative catalytic activity of different compounds on ASS1;
图7表示ASS1
WT和ASS1
G362V蛋白纯化后考马斯亮蓝染色图;
Figure 7 shows Coomassie brilliant blue staining after purification of ASS1 WT and ASS1 G362V proteins;
图8表示多杀菌素A(SPA)和LM-2I对突变型ASS1的活性影响;Figure 8 shows the effects of spinosyn A (SPA) and LM-2I on the activity of mutant ASS1;
图9表示ASS1在乳腺癌多细胞系的表达存在差异。(a)Western blot检测ASS1在多种乳腺癌细胞系中 的表达情况,软件Image J对条带进行灰度扫描,以表达量最低的MDA-MB-231为参照,定义为1,进行相对定量,得到ASS1的相对表达谱(b);Figure 9 shows that there are differences in the expression of ASS1 in multiple breast cancer cell lines. (a) Western blot detects the expression of ASS1 in a variety of breast cancer cell lines, and the software Image J performs a grayscale scan of the band, and uses the lowest expression MDA-MB-231 as a reference, defined as 1, for relative quantification , Get the relative expression profile of ASS1 (b);
图10表示乳腺癌多细胞系增殖率与ASS1表达量呈显著负相关。MTT法检测多细胞系48h的增殖率(a),(b)细胞增殖率与ASS1表达量的相关性分析;Figure 10 shows that the proliferation rate of breast cancer multi-cell lines is significantly negatively correlated with the expression of ASS1. MTT method was used to detect the 48h proliferation rate of multi-cell lines (a), (b) the correlation analysis between cell proliferation rate and ASS1 expression;
图11表示ASS1敲低或过表达后对药物敏感性检测。SPA或LM-2I分别处理MDA-MB-231ASS1过表达细胞系(a)或MCF-7 ASS1敲低细胞系(b)48h,MTT检测细胞存活率。每组实验重复三次(mean±s.d.;n=3),***表示p<0.001。Figure 11 shows the detection of drug sensitivity after knockdown or overexpression of ASS1. MDA-MB-231ASS1 overexpression cell line (a) or MCF-7 ASS1 knockdown cell line (b) were treated with SPA or LM-2I for 48h, and cell survival rate was detected by MTT. Each experiment was repeated three times (mean±s.d.; n=3), *** means p<0.001.
图12表示SPA和LM-2I抑制瘤体体积的增长。SPA(10mg/kg/d)和LM-2I(5m/kg/d)分别给药18天,隔天给药,并记录瘤体最长径和最短径,通过公式计算得到瘤体体积,其中Vehicle为溶剂对照,实验结果采用mean±s.d.统计,n=7,*表示p<0.05,**表示p<0.01。Figure 12 shows that SPA and LM-2I inhibit tumor volume growth. SPA (10mg/kg/d) and LM-2I (5m/kg/d) were administered for 18 days, every other day, and the longest diameter and shortest diameter of the tumor were recorded, and the tumor volume was calculated by the formula, where Vehicle is a solvent control. The experimental results are calculated by mean±sd, n=7, * means p<0.05, ** means p<0.01.
图13 ASS1敲除后能显著降低SPA和LM-2I的抗肿瘤活性。采用CRISPR/Cas9敲除MDA-MB-231细胞中的ASS1(a),SPA(b)和LM-2I(c)处理细胞48h,结晶紫染色检测生存率,每组实验重复三次。Figure 13 Knockout of ASS1 can significantly reduce the anti-tumor activity of SPA and LM-2I. CRISPR/Cas9 was used to knock out ASS1(a), SPA(b) and LM-2I(c) in MDA-MB-231 cells for 48h, and the survival rate was detected by crystal violet staining. Each experiment was repeated three times.
图14 SPA和LM-2I抑制瘤体体积的增长。SPA(10mg/kg/d)和LM-2I(5m/kg/d)分别给药28天,隔天给药,并记录瘤体最长径和最短径,通过公式计算得到瘤体体积,其中Vehicle为溶剂对照,每个样品组小鼠数量为8只,采用单因素方差分析进行统计,*表示P<0.05,***表示P<0.001。Figure 14 SPA and LM-2I inhibit the growth of tumor volume. SPA (10mg/kg/d) and LM-2I (5m/kg/d) were administered for 28 days, every other day, and the longest diameter and shortest diameter of the tumor were recorded, and the tumor volume was calculated by the formula, where Vehicle is a solvent control. The number of mice in each sample group is 8 and the statistics are performed by one-way analysis of variance. * means P<0.05, *** means P<0.001.
具体实施方式Detailed ways
下面结合实施例对本发明作进一步说明。In the following, the present invention will be further described in conjunction with embodiments.
实施例1Example 1
靶点鉴定和确证实验Target identification and confirmation experiment
具体试验步骤如下:The specific test steps are as follows:
1)合成基于生物素的多杀菌素探针多杀菌素-生物素共合物Xn-03-17A。1) Synthesis of a biotin-based spinosyn probe spinosyn-biotin complex Xn-03-17A.
(1)N-(3-溴己烷基)多杀菌素的合成:向100mL单口圆底烧瓶中加入多杀菌素B 1g(1.39mmoL)、乙腈20ml和385mg(1.39mmol)碳酸钾,最后加入1,6-二溴己烷2.14mL(13.9mmoL),于45℃下搅拌48h。抽滤除去产生的固体,除去溶剂,用50mL水和EA(3×60mL)萃取,合并有机相,无水硫酸钠干燥。除去溶剂后经硅胶柱层V(乙酸乙酯):V(石油醚)=4:1得白色固体840mg,产率73%。m.p.95~98℃;HRMS calcd.forC
46H
74BrNO
10880.4574,found 880.4602。
(1) Synthesis of N-(3-bromohexyl) spinosyn: Add 1g (1.39mmoL) of spinosyn B, 20ml of acetonitrile and 385mg (1.39mmol) of potassium carbonate to a 100mL single-necked round bottom flask, and finally add 2.14mL (13.9mmoL) of 1,6-dibromohexane, stirred at 45°C for 48h. The resulting solid was removed by suction filtration, the solvent was removed, and the mixture was extracted with 50 mL of water and EA (3×60 mL). The organic phases were combined and dried with anhydrous sodium sulfate. After the solvent was removed, the silica gel column layer V (ethyl acetate): V (petroleum ether) = 4:1 to obtain 840 mg of white solid, the yield was 73%. mp95~98℃; HRMS calcd.forC 46 H 74 BrNO 10 880.4574, found 880.4602.
(2)多杀菌素-己烷基-生物素(Xn-03-17A)的合成:向50mL单口圆底烧瓶中加入DMF1.5mL、化合物5100mg(0.11mmoL),和生物素31mg(0.13mmoL),最后加入K
2CO
3 16mg(0.11mmoL),室温搅拌12h。向反应液中加入15ml水,有大量白色沉淀析出,用EA(3×25mL)萃取,合并有机相,无水硫酸钠干燥。除去溶剂后经硅胶柱层析V(乙酸乙酯):V(甲醇)=20:1纯化,再用V(正己烷):V(异丙醇)=6:1重结晶得白色粉末68mg,产率57%,m.p.124~129℃;
1HNMR(500MHz,CDCl
3)δ:6.78(s,1H),5.90(d,J=9.7Hz,1H),5.82(m,1H),5.22(s,1H),4.97(s,1H),4.87(d,J=1.3Hz,1H),4.73-4.64(m,1H),4.57-4.50(m,1H),4.44(d,J=6.6Hz,1H),4.38-4.28(m,2H),4.08(t,J=6.7Hz,2H),3.68-3.61(m,1H),3.59-3.56(m,4H),3.54-3.46(m,10H),3.33-3.27(m,1H),3.20-3.11(m,3H),3.06-2.99(m,1H),2.96-2.92(m,1H),2.91-2.86 (m,1H),2.77(d,J=12.8Hz,1H),2.43-2.33(m,5H),2.30-2.25(m,2H),2.19(s,3H),1.99-1.92(m,2H),1.74-1.61(m,10H),1.59-1.53(m,4H),1.52-1.45(m,6H),1.39-1.32(m,6H),1.30(d,J=6.2Hz,4H),1.26-1.25(m,3H),1.20(d,J=6.8Hz,4H),0.95-0.88(m,1H),0.84(t,J=7.5Hz,3H);HRMS calcd.forC
56H
89N
3O
13S 1044.6194,found 1044.6234。
(2) Synthesis of Spinosyn-Hexyl-Biotin (Xn-03-17A): Add DMF1.5mL, compound 5100mg (0.11mmoL), and biotin 31mg (0.13mmoL) to a 50mL single-neck round bottom flask Finally, 16 mg of K 2 CO 3 (0.11 mmoL) was added, and the mixture was stirred at room temperature for 12 hours. 15 ml of water was added to the reaction solution, a large amount of white precipitate was precipitated, and it was extracted with EA (3×25 mL), and the organic phases were combined and dried with anhydrous sodium sulfate. After removing the solvent, it was purified by silica gel column chromatography V (ethyl acetate): V (methanol) = 20:1, and then recrystallized with V (n-hexane): V (isopropanol) = 6:1 to obtain 68 mg of white powder. Yield 57%, mp124~129°C; 1 HNMR (500MHz, CDCl 3 ) δ: 6.78 (s, 1H), 5.90 (d, J = 9.7 Hz, 1H), 5.82 (m, 1H), 5.22 (s, 1H), 4.97(s,1H), 4.87(d,J=1.3Hz,1H),4.73-4.64(m,1H),4.57-4.50(m,1H),4.44(d,J=6.6Hz,1H ), 4.38-4.28 (m, 2H), 4.08 (t, J = 6.7Hz, 2H), 3.68-3.61 (m, 1H), 3.59-3.56 (m, 4H), 3.54-3.46 (m, 10H), 3.33-3.27 (m, 1H), 3.20-3.11 (m, 3H), 3.06-2.99 (m, 1H), 2.96-2.92 (m, 1H), 2.91-2.86 (m, 1H), 2.77 (d, J =12.8Hz, 1H), 2.43-2.33 (m, 5H), 2.30-2.25 (m, 2H), 2.19 (s, 3H), 1.99-1.92 (m, 2H), 1.74-1.61 (m, 10H), 1.59-1.53 (m, 4H), 1.52-1.45 (m, 6H), 1.39-1.32 (m, 6H), 1.30 (d, J = 6.2 Hz, 4H), 1.26-1.25 (m, 3H), 1.20 ( d, J = 6.8 Hz, 4H), 0.95-0.88 (m, 1H), 0.84 (t, J = 7.5 Hz, 3H); HRMS calcd. for C 56 H 89 N 3 O 13 S 1044.6194, found 1044.6234.
2)探针Xn-03-17A探寻互作蛋白(pull-down实验)。2) Probe Xn-03-17A to search for interacting proteins (pull-down experiment).
用Xn-03-17A与MCF-7细胞裂解液孵育4℃过夜,然后加入链霉亲和素磁珠室温孵育4h,设置不加、10倍和20倍药物竞争组,磁场吸附磁珠,使用IP裂解液反复清洗磁珠4次后,加入SDS-loading buffer煮沸10min,SDS-PAGE后硝酸银染色,实验独立重复三次结果一致(n=3)。如图4结果显示Xn-03-17A泳道有特异性结合带,而10倍和20倍药物组可以竞争,没有条带。特异性条带进行MS鉴定,结果显示多杀菌素及其衍生物的作用靶点为蛋白ASS1。其中图4A是使用Xn-03-17A探针从MCF-7细胞裂解液中Pull-down产物银染结果图。图4B为使用ASS1抗体Western blot检测图。本发明确证ASS1是多杀菌素衍生物的作用靶点。Incubate with Xn-03-17A and MCF-7 cell lysate at 4°C overnight, then add streptavidin magnetic beads and incubate at room temperature for 4 hours. Set the non-addition, 10 times and 20 times drug competition groups, magnetic field adsorption magnetic beads, use After washing the magnetic beads with IP lysis solution 4 times, adding SDS-loading buffer and boiled for 10 minutes, after SDS-PAGE, silver nitrate staining, the experiment was repeated three times independently and the results were consistent (n=3). The results in Figure 4 show that the Xn-03-17A lane has a specific binding band, while the 10-fold and 20-fold drug groups can compete without bands. MS identification of specific bands showed that the target of spinosyn and its derivatives was the protein ASS1. Figure 4A is the result of silver staining of Pull-down product from MCF-7 cell lysate using Xn-03-17A probe. Figure 4B is a Western blot detection image using ASS1 antibody. This issue clearly proves that ASS1 is the target of spinosyn derivatives.
3)随后,我们将特异性条带切割下来,胶内消化后进行MS/MS质谱分析,通过比对蛋白数据库发现,可信度最高的是ASS1,我们共检测到特异性肽段和特异性图谱,涵盖了117个氨基酸,ASS1共包含412个氨基酸,检测到的肽段占28.4%,而且分子量大小为47kDa(图3),与银染结果匹配。为了确认质谱的结果,我们使用了ASS1特异性单克隆抗体对Pull-down产物进行Western blot检测,将图3所得到的特异性条带切胶、酶解后进行质谱分析,通过比对数据库,发现ASS1鉴定出来的肽段最多,评分最高,图中红色标记出来的表示鉴定到的肽段(图5),结果表明拖下来的蛋白确实是ASS1。3) Subsequently, we cut the specific bands, digested in the gel, and analyzed by MS/MS mass spectrometry. By comparing the protein database, we found that the most reliable is ASS1. We detected specific peptides and specificity. The map covers 117 amino acids. ASS1 contains 412 amino acids. The detected peptides account for 28.4%, and the molecular weight is 47kDa (Figure 3), which matches the silver staining result. In order to confirm the results of mass spectrometry, we used ASS1 specific monoclonal antibody to detect the pull-down products by Western blot. After cutting the gel and enzymatic digestion of the specific bands obtained in Figure 3, we performed mass spectrometry analysis, and compared the database. It was found that ASS1 identified the most peptides and had the highest score. The red marker in the figure represents the identified peptides (Figure 5). The results indicate that the dragged protein is indeed ASS1.
实施例2Example 2
药物对蛋白ASS1酶活性影响The effect of drugs on the enzyme activity of protein ASS1
ASS1活性检测原理是:ASS1催化瓜氨酸与天冬氨酸反应,生成精氨酸代琥珀酸,该反应会消耗ATP生成焦磷酸(PPi),生成的PPi在焦磷酸酶的催化作用下生产磷酸,磷酸与钼酸铵反应生成磷钼杂多酸,在维生素C的还原下生成蓝色的磷钼蓝,在OD660有特征吸收峰。The principle of ASS1 activity detection is: ASS1 catalyzes the reaction of citrulline and aspartic acid to produce arginine succinic acid. This reaction consumes ATP to generate pyrophosphate (PPi), and the generated PPi is produced under the catalysis of pyrophosphatase. Phosphoric acid, phosphoric acid reacts with ammonium molybdate to generate phosphomolybdenum heteropoly acid, which is reduced by vitamin C to generate blue phosphomolybdenum blue, which has a characteristic absorption peak at OD660.
酶活性计算公式:Enzyme activity calculation formula:
酶活性为:[(药物+ASS1)OD
660-NCOD
660]/(ASS1OD
660-NCOD
660)×100%。
The enzyme activity is: [(drug+ASS1)OD 660 -NCOD 660 ]/(ASS1OD 660 -NCOD 660 )×100%.
(药物+ASS1)OD
660:加药物和ASS1时溶液吸光度(波长660nm);ASS1OD
660:加ASS1时溶液吸光度溶液吸光度(波长660nm);NCOD
660:空白参照溶液吸光度(波长660nm)。
(Drug + ASS1) OD 660 : the absorbance of the solution when the drug and ASS1 are added (wavelength 660nm); ASS1OD 660 : the absorbance of the solution when ASS1 is added, the absorbance of the solution (wavelength 660nm); NCOD 660 : the absorbance of the blank reference solution (wavelength 660nm).
1)ASS1的原核表达1) Prokaryotic expression of ASS1
(1)原核表达载体的构建(1) Construction of prokaryotic expression vector
提取人乳腺癌细胞系MCF-7细胞系总RNA,RT-PCR扩增ASS1基因,使用引物为(5′-3′):The total RNA of human breast cancer cell line MCF-7 cell line was extracted, and the ASS1 gene was amplified by RT-PCR, using primers (5′-3′):
ASS1-F:ACCCTCGAGGGATCCGAATTCATGTCCAGCAAAGGCTCC(SEQ ID NO10);ASS1-F: ACCCTCGAGGGATCCGAATTCATGTCCAGCAAAGGCTCC (SEQ ID NO10);
ASS1-R:AGACTGCAGGTCGACAAGCTTTTATTTGGCAGTGACCTTASS1-R: AGACTGCAGGTCGACAAGCTTTTATTTGGCAGTGACCTT
(SEQ ID NO 11)。(SEQ ID NO 11).
提取pET-28a质粒,酶切、胶回收后,按同源重组的方法将ASS1基因整合到pET-28a质粒中。The pET-28a plasmid was extracted, digested with restriction enzymes, and recovered by the gel. According to the method of homologous recombination, the ASS1 gene was integrated into the pET-28a plasmid.
转化:将构建好的pET-28a质粒转化到大肠杆菌DH5a中,筛选出阳性克隆送测序,对于测序正确的克隆扩大培养后提取质粒,转化到BL21(DE3)菌株中,PCR鉴定阳性克隆,确定条带大小为1.0-1.5kb之间,送测序。选取测序正确的菌株-80℃保菌,备用。Transformation: Transform the constructed pET-28a plasmid into Escherichia coli DH5a, select positive clones and send them for sequencing. After the clones with correct sequencing are expanded and cultured, the plasmids are extracted and transformed into the BL21(DE3) strain. The positive clones are identified by PCR and confirmed The band size is between 1.0-1.5kb and is sent for sequencing. Select the correctly sequenced strains to preserve the bacteria at -80°C and use them for later use.
(2)原核表达:取出-80℃保存的构建好的ASS1BL21(DE3)菌株恢复培养至OD660到0.4-0.6之间,加入终浓度为1mM IPTG进行诱导4h,离心收集菌液,-80℃保存备用。(2) Prokaryotic expression: Take out the constructed ASS1BL21(DE3) strain stored at -80℃ and restore it to OD660 to 0.4-0.6, add IPTG to a final concentration of 1mM and induce 4h, collect the bacterial solution by centrifugation, and store at -80℃ spare.
蛋白的提取:将-80℃保存的菌液冰上解冻,按每克2-5mL加入lysis buffer冲液重悬细菌,加溶菌酶至终浓度为1mg/mL,冰上放置30min,超声破壁,离心,取上清,冰上待用。Protein extraction: Thaw the bacteria liquid stored at -80℃ on ice, add 2-5mL per gram of lysis buffer to resuspend the bacteria, add lysozyme to a final concentration of 1mg/mL, place on ice for 30 minutes, and ultrasonically break the wall , Centrifuge, take the supernatant, set aside on ice.
(3)蛋白的纯化:按每4mL裂解液加入1mL 50%Ni-NTA填料的比例加入填料,4℃旋转孵育60min,将混合物装柱,wash buffer洗两次,每次1mL,elution buffer洗4次,每次1mL,将四次洗脱的液体收集。(3) Protein purification: add 1mL 50% Ni-NTA filler per 4mL lysate, add fillers, rotate at 4℃ and incubate for 60min, load the mixture into the column, wash the buffer twice, 1mL each time, and wash the buffer for 4 times. Collect the eluted liquid four times, 1 mL each time.
(4)蛋白的除盐和保存:将洗脱液放入超滤管中,离心除盐,根据蛋白的性质,调整储存缓冲液,根据所需的浓度,调整缓冲液体积。(4) Desalting and storage of protein: Put the eluate into an ultrafiltration tube, centrifuge to remove the salt, adjust the storage buffer according to the nature of the protein, and adjust the buffer volume according to the required concentration.
(5)分装与保存:将测定好蛋白浓度的蛋白分装,每只10-20μL分装,液氮速冻后-80℃保存。(5) Divide and store: Divide the protein with the measured protein concentration into 10-20μL each, and store it at -80℃ after quick freezing in liquid nitrogen.
2)0.5μM ASS1与20μM药物4℃孵育过夜,加入缓冲液37℃孵育1min,之后加入等体积的Molybdate buffer显色3min,37℃,OD660检测吸光度。不予药物孵育的ASS1组作为阳性对照,没有ASS1的试剂组为NC。缓冲液组分为:20mM Tris
.HCl(pH 7.8)、2mM ATP、10mM瓜氨酸、10mM天冬氨酸、6mM MgCl2、20mM KCl、0.2U焦磷酸酶。Molybdate buffer组分为:10mM维生素C、2.5mM的钼酸铵、2%(V/V)硫酸(酶激活结果图6和表1)。
2) 0.5μM ASS1 and 20μM drug were incubated overnight at 4°C, and the buffer was added at 37°C and incubated for 1min. Then an equal volume of Molybdate buffer was added for 3min color development, 37°C, and the absorbance was detected by OD660. The ASS1 group without drug incubation was used as a positive control, and the reagent group without ASS1 was NC. The buffer components are: 20mM Tris . HCl (pH 7.8), 2mM ATP, 10mM citrulline, 10mM aspartic acid, 6mM MgCl2, 20mM KCl, 0.2U pyrophosphatase. Molybdate buffer components are: 10mM vitamin C, 2.5mM ammonium molybdate, 2% (V/V) sulfuric acid (enzyme activation results are shown in Figure 6 and Table 1).
表1多杀菌素衍生物激活精氨酸代琥珀酸合成酶的相对活性Table 1 The relative activity of spinosyn derivatives in activating arginine succinate synthase
结果显示,多杀菌素衍生物能够不同程度增加ASS1酶活性,与ASS1阳性对照相比,酶活性增幅为5.8-203.9%。SPA和LM-2I的半数激活浓度AC
50分别为18.6和2.0μΜ。
The results show that spinosyn derivatives can increase the enzyme activity of ASS1 to varying degrees. Compared with the positive control of ASS1, the enzyme activity increases by 5.8-203.9%. The half activation concentration AC 50 of SPA and LM-2I were 18.6 and 2.0 μM, respectively.
实施例3Example 3
药物对蛋白ASS1和ASS1
G362V酶活性影响
The effect of drugs on the enzyme activity of protein ASS1 and ASS1 G362V
为了检测SPA及衍生物LM-2I对蛋白ASS1和ASS1
G362V酶活性影响,我们通过同源重组技术构建了ASS1 pET28a质粒,并在此基础上,采用基因定点突变技术,构建了ASS1
G362V pET28a质粒,构建好的质粒转入BL21(DE3)中进行原核表达并纯化蛋白ASS1和ASS1
G362V。
In order to detect the effect of SPA and its derivative LM-2I on the enzyme activity of protein ASS1 and ASS1 G362V , we constructed the ASS1 pET28a plasmid through homologous recombination technology, and on this basis, used gene-directed mutagenesis technology to construct the ASS1 G362V pET28a plasmid. The constructed plasmid was transformed into BL21 (DE3) for prokaryotic expression and purified protein ASS1 and ASS1 G362V .
具体步骤为:The specific steps are:
3.1 ASS1和ASS1
G362V氨基酸序列
3.1 ASS1 and ASS1 G362V amino acid sequence
ASS1氨基酸序列为:The amino acid sequence of ASS1 is:
ASS1
G362V氨基酸序列:
ASS1 G362V amino acid sequence:
ASS1在362位点为G,ASS1G
362V在362位点为括号内的V。
ASS1 is G at position 362, and ASS1G 362V is V in brackets at position 362.
3.2 ASS1-pET-28a质粒构建3.2 Construction of ASS1-pET-28a Plasmid
(1)提取人乳腺癌细胞系HCC1806细胞系总RNA,RT-PCR扩增ASS1基因,使用引物为(5′-3′):(1) Extract the total RNA of human breast cancer cell line HCC1806 cell line, and amplify the ASS1 gene by RT-PCR, using primers (5′-3′):
ASS1-F:ACCCTCGAGGGATCCGAATTCATGTCCAGCAAAGGCTCC(SEQ ID NO 3);ASS1-F: ACCCTCGAGGGATCCGAATTCATGTCCAGCAAAGGCTCC (SEQ ID NO 3);
ASS1-R:AGACTGCAGGTCGACAAGCTTTTATTTGGCAGTGACCTT(SEQ ID NO 4)。ASS1-R: AGACTGCAGGTCGACAAGCTTTTATTTGGCAGTGACCTT (SEQ ID NO 4).
(2)提取pET-28a质粒,酶切胶回收后按同源重组的方法将ASS1基因整合到pET-28a质粒中。(2) The pET-28a plasmid was extracted, and the ASS1 gene was integrated into the pET-28a plasmid according to the method of homologous recombination after the digested gel was recovered.
(3)转化:将构建好的pET-28a质粒转化到大肠杆菌DH
5a中,筛选出阳性克隆送测序,对于测序正确的克隆扩大培养后提取质粒,转化到BL21(DE
3)菌株中,PCR鉴定阳性克隆,确定条带大小为1.0-1.5kb之间,送测序。
(3) Transformation: Transform the constructed pET-28a plasmid into Escherichia coli DH 5 a, and select positive clones for sequencing. After the clones with correct sequencing are expanded and cultured, the plasmids are extracted and transformed into BL21(DE 3 ) strain. The positive clones were identified by PCR, and the band size was determined to be between 1.0-1.5 kb and sent for sequencing.
其中ASS1的核苷酸序列NCBI数据库中的ASS1variant 1(ACCESSION:NM_000050)的CDS序列完全一致,当翻译为氨基酸时,其序列与Uniprot数据库中的ASS1序列完全一致,因此,我们构建的ASS1原核表达载体可以用于后续的研究。选取测序正确的菌株-80℃保菌,备用。Among them, the nucleotide sequence of ASS1 is exactly the same as the CDS sequence of ASS1variant 1 (ACCESSION: NM_000050) in the NCBI database. When translated into amino acids, its sequence is exactly the same as the ASS1 sequence in the Uniprot database. Therefore, the prokaryotic expression of ASS1 we constructed The carrier can be used for subsequent research. Select the correctly sequenced strains to preserve the bacteria at -80°C and use them for later use.
3.3 ASS1
G362V-pET-28a表达质粒的构建
3.3 Construction of ASS1 G362V -pET-28a expression plasmid
使用南京诺唯赞生物技术有限公司的Mut Express II Fast Mutagenesis Kit V2试剂盒,具体操作如下:Use the MutExpress II Fast Mutagenesis Kit V2 kit of Nanjing Novazan Biotechnology Co., Ltd., and the specific operations are as follows:
设计点突变引物,根据同源重组的原理设计突变引物:Design point mutation primers, and design mutation primers based on the principle of homologous recombination:
ASS1
G362V-F:TACATCCTCGTCCGGGAGTCCCCACTGTCTCTCTACAAT(SEQ ID NO 5)
ASS1 G362V -F: TACATCCTCGTCCGGGAGTCCCCACTGTCTCTCTACAAT (SEQ ID NO 5)
ASS1
G362V-R:GGACTCCCGGACGAGGATGTACACCTGGCCCTTGAGGAC(SEQ ID NO 6)
ASS1 G362V- R: GGACTCCCGGACGAGGATGTACACCTGGCCCTTGAGGAC (SEQ ID NO 6)
PCR扩增:使用突变引物对pet28a-ASS1质粒进行扩增;扩增产物的Dpnl消化,去除甲基化模板质粒;进行同源重组反应,转化,测序鉴定。PCR amplification: use mutant primers to amplify the pet28a-ASS1 plasmid; digest the amplified product with Dpnl to remove the methylated template plasmid; perform homologous recombination, transformation, and sequencing for identification.
3.4蛋白的表达与纯化3.4 Protein expression and purification
(1)原核表达:取出-80℃保存的构建好的ASS1BL21(DE
3)菌株恢复培养至OD
660到0.4-0.6之间,加入终浓度为1mM IPTG进行诱导4h,离心收集菌液,-80℃保存备用。
(1) Prokaryotic expression: Take out the constructed ASS1BL21(DE 3 ) strain stored at -80°C and restore it to OD 660 to 0.4-0.6, add IPTG to a final concentration of 1 mM for induction for 4 hours, and collect the bacterial solution by centrifugation, -80 Store at ℃ for later use.
(2)蛋白的提取:将-80℃保存的菌液冰上解冻,按每克2-5mL加入Lysis buffer冲液重悬细菌,加溶菌酶至终浓度为1mg/mL,冰上放置30min,超声破壁,离心,取上清,冰上待用。(2) Protein extraction: Thaw the bacteria liquid stored at -80°C on ice, add 2-5 mL of Lysis buffer per gram to resuspend the bacteria, add lysozyme to a final concentration of 1 mg/mL, and place on ice for 30 minutes. Ultrasonic break the wall, centrifuge, take the supernatant, and set aside on ice.
(3)蛋白的纯化:按每4mL裂解液加入1mL 50%Ni-NTA填料的比例加入填料,4℃旋转孵育60min,将混合物装柱,wash buffer洗两次,每次1mL,elution buffer洗4次,每次1mL,将四次洗脱的液体收集。(3) Protein purification: add 1mL 50% Ni-NTA filler per 4mL lysate, add fillers, rotate at 4℃ and incubate for 60min, load the mixture into the column, wash the buffer twice, 1mL each time, and wash the buffer for 4 times. Collect the eluted liquid four times, 1 mL each time.
(4)蛋白的除盐和保存:将洗脱液放入超滤管中,离心除盐,根据蛋白的性质,调整储存缓冲液,根据所需的浓度,调整缓冲液体积。(4) Desalting and storage of protein: Put the eluate into an ultrafiltration tube, centrifuge to remove the salt, adjust the storage buffer according to the nature of the protein, and adjust the buffer volume according to the required concentration.
(5)分装与保存:将测定好蛋白浓度的蛋白分装,每只10-20μL分装,液氮速冻后-80℃保存。(5) Divide and store: Divide the protein with the measured protein concentration into 10-20μL each, and store it at -80℃ after quick freezing in liquid nitrogen.
其中:Lysis buffer(1L)(使用前加蛋白酶抑制剂,使用前加5mM巯基乙醇):50mM Tris.HCl,500mM NaCl,10mM imidazole,Adjust pH to 8.0 using NaOH;Among them: Lysis buffer (1L) (add protease inhibitor before use, add 5mM mercaptoethanol before use): 50mM Tris.HCl, 500mM NaCl, 10mM imidazole, Adjust pH to 8.0 using NaOH;
Wash buffer(1L)(不加蛋白酶抑制剂,使用前加5mM巯基乙醇):50mM Tris.HCl,500mM NaCl,20mM imidazole,Adjust pH to 8.0 using NaOH;Wash buffer (1L) (without protease inhibitor, add 5mM mercaptoethanol before use): 50mM Tris.HCl, 500mM NaCl, 20mM imidazole, Adjust pH to 8.0 using NaOH;
Elution buffer(1L)(不加蛋白酶抑制剂,不加5mM巯基乙醇):50mM Tris.HCl,500mM NaCl,250mM imidazole,Adjust pH to 8.0 using NaOHElution buffer (1L) (no protease inhibitor, no 5mM mercaptoethanol): 50mM Tris.HCl, 500mM NaCl, 250mM imidazole, Adjust pH to 8.0 using NaOH
洗脱后脱盐换成(20mM的Tris.HCl+100-300mM NaCl),加入终浓度为1mM TCEP超滤浓缩至100μM(越高越好),10μL每只分装,液氮速冻后-80℃保存。After elution, desalinate and change to (20mM Tris.HCl+100-300mM NaCl), add the final concentration of 1mM TCEP ultrafiltration and concentrate to 100μM (the higher the better), 10μL each aliquoted, liquid nitrogen after quick freezing -80℃ save.
纯化后用考马斯亮蓝染色检测ASS1和ASS1
G362V表达纯化情况(图7)。结果显示ASS1和ASS1
G362V两种蛋白均在上清液中表达,溶于水,且纯化后的纯度在90%以上。
After purification, Coomassie brilliant blue was used to detect the expression and purification of ASS1 and ASS1 G362V (Figure 7). The results showed that both ASS1 and ASS1 G362V proteins were expressed in the supernatant, dissolved in water, and the purity after purification was above 90%.
3.5体外酶活实验3.5 In vitro enzyme activity experiment
ASS1和ASS1
G362V浓度为0.5μM,与多杀菌素及其衍生物浓度LM-2I为10μM,在4℃孵育过夜,加入缓冲液,37℃孵育1min,之后加入等体积的Molybdate buffer显色3min,37℃,OD
660检测吸光度。不予药物孵育的ASS1组作为阳性对照,没有ASS1的试剂组为NC。
The concentration of ASS1 and ASS1 G362V is 0.5μM, and the concentration of spinosyn and its derivative LM-2I is 10μM. Incubate overnight at 4°C, add buffer, incubate at 37°C for 1 min, and then add an equal volume of Molybdate buffer to develop color for 3 min. At 37°C, the absorbance was detected by OD 660. The ASS1 group without drug incubation was used as a positive control, and the reagent group without ASS1 was NC.
相对酶活性为:[ASS1
G362V OD
660-NCOD
660]/(ASS1OD
660-NCOD
660)×100%。
The relative enzyme activity is: [ASS1 G362V OD 660 -NCOD 660 ]/(ASS1OD 660 -NCOD 660 )×100%.
其中缓冲液组分为:20mM Tris.Hcl(pH 7.8)、2mM ATP、10mM瓜氨酸、10mM天冬氨酸、6mM MgCl2、20mM KCl、0.2U焦磷酸酶。Molybdate buffer组分为:10mM维生素C、2.5mM的钼酸铵、2%(V/V)硫酸。The buffer components are: 20mM Tris.Hcl (pH 7.8), 2mM ATP, 10mM citrulline, 10mM aspartic acid, 6mM MgCl2, 20mM KCl, 0.2U pyrophosphatase. Molybdate buffer components are: 10mM vitamin C, 2.5mM ammonium molybdate, 2% (V/V) sulfuric acid.
通过ASS1体外酶活实验发现SPA和LM-2I可以恢复突变型ASS1活性。ASS1和ASS1
G362V反应浓度为0.5μM,多杀菌素A(SPA)及其衍生物浓度LM-2I为10μM,反应时间为1min,单独的ASS1为阳性对照,结果显示,多杀菌素及其衍生物LM-2I能够不同程度增加ASS1
G362V酶活性,其中ASS1为阳性对照,其酶活性标准化为100±6.49%,ASS1
G362V酶活性为60.43±3.64%,10μM的SPA处理ASS1
G362V后酶活性为70.8±4.22%,与ASS1
G362V本身酶活性相比,活性增加10.37%,不显著;与ASS1酶活性相比,显著降低。10μM的LM-2I处理ASS1
G362V后酶活性94.12±1.83%,与ASS1
G362V本身酶活性相比,活性增加33.69%,显著增加;与ASS1酶活性相比,基本一致(图8)。
Through the in vitro enzyme activity experiment of ASS1, it was found that SPA and LM-2I can restore the activity of mutant ASS1. The reaction concentration of ASS1 and ASS1 G362V was 0.5μM, the concentration of Spinosyn A (SPA) and its derivatives LM-2I was 10μM, and the reaction time was 1 min. ASS1 alone was a positive control. The results showed that spinosyn and its derivatives LM-2I can increase the enzyme activity of ASS1 G362V to varying degrees, in which ASS1 is the positive control, and its enzyme activity is standardized to 100±6.49%, the enzyme activity of ASS1 G362V is 60.43±3.64%, and the enzyme activity of ASS1 G362V after 10μM SPA treatment is 70.8± 4.22%, compared with the enzyme activity of ASS1 G362V itself, the activity increased by 10.37%, not significant; compared with the enzyme activity of ASS1, significantly decreased. The enzyme activity of ASS1 G362V treated with 10μM LM-2I was 94.12±1.83%. Compared with the enzyme activity of ASS1 G362V itself, the activity increased by 33.69%, which was a significant increase; compared with the enzyme activity of ASS1, it was basically the same (Figure 8).
实施例4Example 4
化合物对不同ASS1表达水平肿瘤细胞的活性影响Effects of compounds on tumor cell activity with different expression levels of ASS1
1慢病毒过表达载体和shRNA干扰载体的构建1 Construction of lentiviral overexpression vector and shRNA interference vector
ASS1的过表达载体和shRNA干扰载体从吉玛基因购买,其shRNA有两条,序列分别为(5′-3′):The overexpression vector and shRNA interference vector of ASS1 were purchased from Gemma Gene. There are two shRNAs, the sequences are (5′-3′):
ASS1 shRNA1:ASS1 shRNA1:
ASS1 shRNA2:ASS1 shRNA2:
The negative control shRNA sequence:The negative control shRNA sequence:
ASS1过表达序列采用全合成的方式获得,其序列为人类ASS1variant 1(ACCESSION:NM_000050)的CDS序列。The ASS1 overexpression sequence is obtained by a fully synthetic method, and its sequence is the CDS sequence of human ASS1 variant 1 (ACCESSION: NM_000050).
2慢病毒的包装2 lentivirus packaging
1)复苏293T工具细胞培养至状态良好,胰酶消化,接种到10cm培养皿中,培养过夜,待细胞生长到90%融合时,进行慢病毒包装。1) Resuscitate the 293T tool cells and culture them until they are in good condition, trypsinize them, inoculate them in a 10cm petri dish, and culture them overnight. When the cells grow to 90% confluence, perform lentivirus packaging.
2)取两只1.5mL无菌离心管,一只加入600μL无血清的DMEM培基,按比例加入目的质粒和包装质粒(pGag/Pol、pRev、pVSV-G),混匀,另一只管加入600μL无血清的DMEM培基,再加入120μL RNAi-Mate,混匀,室温放置5min后两管混匀,室温放置20min。2) Take two 1.5mL sterile centrifuge tubes, add 600μL serum-free DMEM medium to one, add the target plasmid and packaging plasmid (pGag/Pol, pRev, pVSV-G) in proportion, mix well, and add to the other tube 600μL of serum-free DMEM medium, and then add 120μL RNAi-Mate, mix well, leave it at room temperature for 5 minutes, then mix the two tubes, and leave it at room temperature for 20 minutes.
3)将培养皿中的完全培养基换成无血清的DMEM培养基,在将配置好的转染体系逐滴加入培养皿中,轻轻的前后左右晃动混匀,继续在培养箱中培养。3) Replace the complete medium in the petri dish with serum-free DMEM medium, add the configured transfection system dropwise to the petri dish, gently shake back and forth to mix, and continue culturing in the incubator.
4)继续培养6h后,去除无血清的DMEM培养基,换成完全培养基,继续培养72h。4) After culturing for 6 hours, remove the serum-free DMEM medium, change to complete medium, and continue culturing for 72 hours.
5)收取培养皿中上清液到50mL的离心管中,即为病毒原液,将病毒原液低温低速离心,4℃,4000rpm,15min,随后将离心管的上清液用0.45μm滤器过滤。5) Collect the supernatant in the culture dish into a 50 mL centrifuge tube, which is the virus stock solution, centrifuge the virus stock solution at low temperature and low speed at 4° C., 4000 rpm, 15 min, and then filter the supernatant in the centrifuge tube with a 0.45 μm filter.
6)将过滤后的病毒液进行超速离心,4℃,20000rpm,2h,去除上清液,加入适量的培养基溶解病毒,分装到到1.5mL离心管中,贴上标记,-80℃保存。6) Ultracentrifuge the filtered virus solution at 4°C, 20000rpm, 2h, remove the supernatant, add an appropriate amount of medium to dissolve the virus, distribute it to 1.5mL centrifuge tubes, label them, and store at -80°C .
3慢病毒滴度检测(GFP荧光计数法)3 Detection of lentivirus titer (GFP fluorescence counting method)
1)293T工具细胞培养至90%融合,胰酶消化,离心后重悬,计数。1) 293T tool cells were cultured to 90% confluence, trypsinized, resuspended after centrifugation, and counted.
2)以每孔3×104细胞/孔接种到96孔板中,混匀后继续培养24h。2) Inoculate a 96-well plate with 3×104 cells/well per well, and continue to culture for 24 hours after mixing.
3)将慢病毒原液10μL,用完全培养基按10倍稀释5个梯度,加入终浓度为5μg/mL的Polybrene增加感染效率。3) Dilute 10 μL of the lentivirus stock solution with complete medium 10 times in 5 gradients, and add Polybrene at a final concentration of 5 μg/mL to increase the infection efficiency.
4)去除96孔板中原有培基,加入含不同浓度梯度的病毒培养基,继续培养24h,设置好空白对照。4) Remove the original medium in the 96-well plate, add virus medium with different concentration gradients, continue culturing for 24 hours, and set a blank control.
5)去除含病毒培养基,换上完全培养基继续培养72h。5) Remove the virus-containing medium, replace it with complete medium and continue culturing for 72 hours.
6)荧光显微镜观察GFP荧光,统计荧光细胞,根据稀释倍数计算病毒滴度。6) Observe the GFP fluorescence with a fluorescence microscope, count the fluorescent cells, and calculate the virus titer according to the dilution factor.
4慢病毒感染及单克隆筛选4Lentiviral infection and monoclonal screening
1)复苏MDA-MB-231和MCF-7细胞,10cm培养皿培养至状态良好,待细胞长大90%融合时,消化、离心和计数,MDA-MB-231(1×10
6/皿)和MCF-7(1.5×10
6/皿)传代,待细胞密度到40-50%时,进行慢病毒感染实验。
1) Resuscitate MDA-MB-231 and MCF-7 cells, culture them in a 10cm petri dish until they are in good condition. When the cells grow to be 90% confluent, digest, centrifuge and count, MDA-MB-231 (1×10 6 /dish) Passage with MCF-7 (1.5×10 6 /dish), and when the cell density reaches 40-50%, perform the lentivirus infection experiment.
2)根据细胞数量,计算所需病毒量(两株细胞的MOI值均为50)和所需病毒的体积,加入终浓度为5μg/mL的Polybrene,用完全培养基补充体积到8mL,混匀。2) According to the number of cells, calculate the amount of virus required (the MOI value of the two cell strains are both 50) and the volume of virus required, add Polybrene with a final concentration of 5μg/mL, replenish the volume with complete medium to 8mL, and mix well .
3)去除细胞原有培养基,加入含病毒的培养基继续培养24h,24h后去除含病毒培养基,换完全培养基继续培养72h。3) Remove the original cell culture medium, add virus-containing medium and continue culturing for 24 hours, remove the virus-containing medium after 24 hours, and change to complete medium to continue culturing for 72 hours.
4)将感染后的细胞消化传代,加入终浓度为2μg/mL的嘌呤霉素(Puromycin)筛选阳性细胞,并 在后续的培养过程中,始终保持培基中含有2μg/mL的嘌呤霉素。4) Digest the infected cells for passage, add Puromycin at a final concentration of 2 g/mL to select positive cells, and keep the culture medium containing 2 g/mL puromycin in the subsequent culture process.
5)存活下来的细胞进行消化,计数,按每孔0.5个细胞的数量接种到96孔板中,进行单克隆筛选。长出来的单克隆胰酶消化后接种到6孔板中,待其长到80-90%左右后,一半用于传代,一半用于提取蛋白Western blot检测目的蛋白的表达情况。对于符合要求的单克隆进行放大培养,液氮保存,并进行MTT实验。5) The surviving cells are digested, counted, and 0.5 cells per well are seeded into a 96-well plate for monoclonal screening. The grown monoclonal trypsin is digested and then inoculated into a 6-well plate. When it grows to about 80-90%, half is used for passaging, and half is used for protein extraction and Western blot to detect the expression of the target protein. The single clones that meet the requirements are amplified and cultured, stored in liquid nitrogen, and MTT experiments are performed.
6)MTT法细胞实验:用ASS1敲低或过表达的细胞系检测多杀菌素A(SPA)或LM-2I的药物敏感性,相同浓度的SPA或LM-2I同时处理MCF-7 ASS1 sh和MCF-7 NC或MDA-MB-231 ASS1 OE和MDA-MB-231 NC细胞48h。6) MTT method cell experiment: use ASS1 knockdown or overexpression cell line to detect the drug sensitivity of spinosyn A (SPA) or LM-2I, and the same concentration of SPA or LM-2I can simultaneously treat MCF-7 ASS1 sh and MCF-7 NC or MDA-MB-231 ASS1 OE and MDA-MB-231 NC cells for 48h.
结果显示:如图9a所示,ASS1在不同细胞系中表达量存在较大差异,在MDA-MB-231中表达最低,在MCF-7中表达最高,为了便于统计,我们使用Image J对条带进行灰度扫描,以ASS1表达量最低MDA-MB-231为参照,定义为1,进行相对定量,得到ASS1相对表达谱(图9b),数值范围在1-11.16±0.57之间。The results show that: as shown in Figure 9a, the expression level of ASS1 varies greatly in different cell lines. The expression is the lowest in MDA-MB-231 and the highest in MCF-7. In order to facilitate statistics, we use Image J to The band was scanned with gray scale, with the lowest expression level of ASS1 MDA-MB-231 as the reference, defined as 1, and relative quantification was performed to obtain the relative expression profile of ASS1 (Figure 9b), with a numerical range between 1-11.16±0.57.
采用MTT的方法,以0h为参照,检测乳腺癌细胞系48h的相对增殖率,如图10所示,我们惊奇的发现:ASS1的相对表达量和细胞增殖率呈现显著的负相关(Spearman’sρ=-0.783,p=0.003)(图10)。以上结果提示我们,ASS1在乳腺癌中可能扮演肿瘤抑制因子的角色。Using the MTT method, with 0h as the reference, the relative proliferation rate of breast cancer cell lines at 48h was detected. As shown in Figure 10, we were surprised to find that the relative expression of ASS1 and the cell proliferation rate showed a significant negative correlation (Spearman'sρ =-0.783, p=0.003) (Figure 10). The above results suggest that ASS1 may play a role as a tumor suppressor in breast cancer.
结果显示,在MDA-MB-231细胞系中(图11),相同浓度的SPA或LM-2I处理,与NC相比,ASS1OE细胞存活率显著增加,药物敏感性减弱;与之相反,在MCF-7细胞系中(图11-2b),与NC相比,ASS1 sh细胞存活率显著减低,药物敏感性增强。显然,多杀菌素衍生物对低表达ASS1肿瘤具有更好的敏感性,可作为ASS1低表达型肿瘤的个体化治疗药物。ASS1低表达型肿瘤不限于乳腺癌,如黑色素瘤,肝细胞癌,前列腺癌,膀胱癌,间皮瘤,卵巢癌,肾癌,胰腺恶性肿瘤,鼻咽癌,骨肉瘤和粘液纤维肉瘤等。The results showed that in the MDA-MB-231 cell line (Figure 11), the same concentration of SPA or LM-2I treatment, compared with NC, the survival rate of ASS1OE cells was significantly increased, and the drug sensitivity decreased; on the contrary, in MCF In the -7 cell line (Figure 11-2b), compared with NC, the survival rate of ASS1 sh cells was significantly reduced, and drug sensitivity was enhanced. Obviously, spinosyn derivatives have better sensitivity to tumors with low ASS1 expression, and can be used as individualized therapeutic drugs for tumors with low ASS1 expression. Tumors with low ASS1 expression are not limited to breast cancer, such as melanoma, hepatocellular carcinoma, prostate cancer, bladder cancer, mesothelioma, ovarian cancer, kidney cancer, pancreatic malignancies, nasopharyngeal carcinoma, osteosarcoma and myxofibrosarcoma.
实施例5Example 5
体内肿瘤抑制效果In vivo tumor suppressor effect
选择了ASS1表达量低、恶性程度高,易转移,预后差且缺乏靶向药物治疗的三阴性乳腺癌MDA-MB-231细胞系为代表构建裸鼠移植瘤模型进行体内实验。The triple-negative breast cancer MDA-MB-231 cell line with low ASS1 expression, high malignancy, easy metastasis, poor prognosis, and lack of targeted drug therapy was selected as a representative to construct a nude mouse xenograft model for in vivo experiments.
购买出生4周的免疫缺陷裸鼠BALB/c(nu/nu),在SPF级动物房适应性饲养一周后,每只裸鼠注射MDA-MB-231细胞5×10
6到小鼠腋下,4-7天后待长成米粒大小的瘤体,瘤体大小约100mm
3,表示建模成功。溶剂组为阴性对照,SPA处理组浓度为10mg/kg/d,LM-2I处理组浓度为5mg/kg.d,隔天给药,给药10次,每天观察小鼠的生活状态,每次给药前称量体重,测量肿瘤长径a和短径b,肿瘤体积使用公式:V=1/2ab2mm
3。
Purchase four-week-old immunodeficient nude mice BALB/c(nu/nu), and after one week of adaptive breeding in an SPF animal room, each nude mouse was injected with 5×10 6 MDA-MB-231 cells into the armpit of the mouse. After 4-7 days, it will grow into a rice grain-sized tumor. The tumor is about 100mm 3 , which means that the modeling is successful. The solvent group is a negative control. The concentration of the SPA treatment group is 10 mg/kg/d, and the concentration of the LM-2I treatment group is 5 mg/kg.d. The administration is administered every other day, 10 times, and the living conditions of the mice are observed every day. Weigh the body weight before administration, measure the long diameter a and short diameter b of the tumor, and use the formula for tumor volume: V=1/2ab2mm 3 .
给药18天后,Vehicle组肿瘤体积841.52±420.81mm
3;SPA(10mg/kg/d)体积386.27±77.06mm
3,与Vehicle相比降低54.10%,有统计学差异;LM-2I(5mg/kg/d)组体积为306.41±79.08mm
3,与Vehicle相比降低63.60%,有统计学差异。从抑制效果来看,LM-2I(5mg/kg/d)优于SPA(10mg/kg/d),其中LM-2I药物浓度只有SPA的一半(图12)。
After 18 days of administration, the tumor volume of Vehicle group was 841.52±420.81mm 3 ; the volume of SPA (10mg/kg/d) was 386.27±77.06mm 3 , which was 54.10% lower than that of Vehicle, which was statistically different; LM-2I (5mg/kg /d) The volume of the group was 306.41±79.08mm 3 , which was reduced by 63.60% compared with Vehicle, which was statistically different. From the point of view of the inhibitory effect, LM-2I (5mg/kg/d) is better than SPA (10mg/kg/d), and the drug concentration of LM-2I is only half of that of SPA (Figure 12).
实验结果证实SPA和衍生物LM-2I能有效抑制ASS1低表达型肿瘤生长。多杀菌素及其衍生物可用于ASS1低表达等缺陷性肿瘤的个体化治疗。Experimental results confirm that SPA and its derivative LM-2I can effectively inhibit the growth of tumors with low ASS1 expression. Spinosyn and its derivatives can be used for individualized treatment of defective tumors such as low expression of ASS1.
实施例6Example 6
SPA及LM-2I通过靶向ASS1发挥抗肿瘤作用SPA and LM-2I exert anti-tumor effects by targeting ASS1
1.CRISPR/Cas9 ASS1基因敲除(Knock Out,KO)载体构建1. CRISPR/Cas9 ASS1 gene knockout (Knock Out, KO) vector construction
在ASS1起始密码ATG下游100bp左右设计2对sgRNA引物:Design two pairs of sgRNA primers about 100bp downstream of the ATG initiation code of ASS1:
ASS1-sgRNA1:ASS1-sgRNA1:
F:CACCGCAGCCACACGAGGATGCACG(SEQ ID NO 12);F: CACCGCAGCCACACGAGGATGCACG (SEQ ID NO 12);
R:AAACCGTGCATCCTCGTGTGGCTGC(SEQ ID NO 13);R: AAACCGTGCATCCTCGTGTGGCTGC (SEQ ID NO 13);
ASS1-sgRNA2:ASS1-sgRNA2:
F:CACCGCGAGGATGCACGAGGTGTCC(SEQ ID NO 14);F: CACCGCGAGGATGCACGAGGTGTCC (SEQ ID NO 14);
R:AAACGGACACCTCGTGCATCCTCGC(SEQ ID NO 15);R: AAACGGACACCTCGTGCATCCTCGC (SEQ ID NO 15);
将设计好的配对引物退火形成双链备用,基因敲除质粒lentiCRISPR v2经BsmBI-v2酶切后电泳,胶回收后与配对引物进行连接,构建好的质粒转Stabl3,测序正确后备用;The designed paired primers are annealed to form a double-strand for use. The gene knockout plasmid lentiCRISPR v2 is digested with BsmBI-v2, electrophoresis, and the gel is recovered and ligated with the paired primers. The constructed plasmid is transferred to Stab13, and the sequence is correct for use;
采用ASS1-sgRNA1引物敲除ASS1的实验组为ASS1-KO1 MDA-MB-231;采用ASS1-sgRNA2引物敲除ASS1的实验组为ASS1-KO2 MDA-MB-231;空白不敲除ASS1的实验组为ASS1-NC(Negative Control)MDA-MB-231细胞。采用两对不同的引物分别构建敲除敲除ASS1载体,充分验证试验的准确性。The experimental group using ASS1-sgRNA1 primer to knock out ASS1 is ASS1-KO1 MDA-MB-231; the experimental group using ASS1-sgRNA2 primer to knock out ASS1 is ASS1-KO2 MDA-MB-231; the blank experimental group without ASS1 knocking out It is ASS1-NC (Negative Control) MDA-MB-231 cells. Two pairs of different primers were used to construct knockout ASS1 vectors, which fully verified the accuracy of the test.
2.病毒包装,具体试验步骤参考实施例4;2. Virus packaging, refer to Example 4 for specific test steps;
3.滴度检测,具体试验步骤参考实施例4;3. Titer detection, refer to Example 4 for specific test steps;
4.MTT检测,具体试验步骤参考实施例4;4. MTT detection, refer to Example 4 for specific test steps;
结果显示,采用CRISPR/Cas9技术在MDA-MB-231细胞中敲除ASS1(图13a),SPA(图13b)和LM-2I(图13c)分别处理ASS1-KO1(Knock Out)MDA-MB-231、ASS1-KO2 MDA-MB-231和ASS1-NC(Negative Control)MDA-MB-231细胞,结果显示,ASS1敲除后,与ASS1-NC MDA-MB-231细胞相比,ASS1-KO1 MDA-MB-231和ASS1-KO2 MDA-MB-231细胞对SPA或LM-2I处理不响应或敏感性极低,表明SPA和LM-2I通过靶向ASS1发挥抗肿瘤作用。The results showed that using CRISPR/Cas9 technology to knock out ASS1 in MDA-MB-231 cells (Figure 13a), SPA (Figure 13b) and LM-2I (Figure 13c) were used to treat ASS1-KO1 (Knock Out) MDA-MB- 231, ASS1-KO2 MDA-MB-231 and ASS1-NC (Negative Control) MDA-MB-231 cells, the results show that after ASS1 knockout, compared with ASS1-NC MDA-MB-231 cells, ASS1-KO1 MDA -MB-231 and ASS1-KO2 MDA-MB-231 cells do not respond or have very low sensitivity to SPA or LM-2I treatment, indicating that SPA and LM-2I exert anti-tumor effects by targeting ASS1.
实施例7Example 7
SPA和LM-2I体内抑瘤效果检测Detection of anti-tumor effect of SPA and LM-2I in vivo
1.裸鼠成瘤实验1. Nude mice tumor formation experiment
整个裸鼠成瘤实验在中南大学实验动物部完成,BALB/c nude小鼠购自SJA Laboratory Animal Co.,Ltd(Hunan),均为4-6周龄雌鼠,体重18-22g。The entire nude mouse tumorigenesis experiment was completed in the Experimental Animal Department of Central South University. BALB/c nude mice were purchased from SJA Laboratory Animal Co., Ltd (Hunan), and they were all 4-6 week old female mice, weighing 18-22 g.
(1)购买回来的小鼠饲养于23~24℃SPF级别环境中,使用灭菌后的饲料和水喂养,喂养3-4天后,对状态良好的小鼠进行标记。(1) The purchased mice were raised in an SPF environment at 23-24°C, and fed with sterilized feed and water. After feeding for 3-4 days, the mice in good condition were marked.
(2)MDA-MB-231细胞培养至对数生长期,0.25%胰酶消化,800rpm离心,室温10min,收集细 胞后,用无血清的DMEM/F12(1:1)培养基清洗细胞3次,800rpm离心,室温10min收集细胞,再加入少量无血清的DMEM/F12(1:1)培养基重悬细胞,计数后调整细胞密度为5×10
7个/mL。
(2) MDA-MB-231 cells were cultured to logarithmic growth phase, 0.25% trypsinization, 800rpm centrifugation, room temperature for 10 minutes, after collecting the cells, wash the cells with serum-free DMEM/F12 (1:1) medium for 3 times After centrifugation at 800 rpm, the cells were collected for 10 minutes at room temperature, and then a small amount of serum-free DMEM/F12 (1:1) medium was added to resuspend the cells. After counting, the cell density was adjusted to 5×10 7 cells/mL.
(3)接种0.1mL(5×10
6个)细胞悬液于小鼠右肢腋下,为了防止注射的细胞悬液渗漏,进针口要与成瘤位点保持1cm左右距离,接种后约5-7天,瘤体体积达到约100mm
3。观察是否有稳定的结节形成,假如有,表示模型构建成功,可进行后续的实验。
(3) Inoculate 0.1 mL (5×10 6 cells) of cell suspension in the armpit of the right limb of the mouse. In order to prevent the injected cell suspension from leaking, the needle inlet should be kept at a distance of about 1 cm from the site of tumor formation. In about 5-7 days, the tumor volume reaches about 100mm 3 . Observe whether there is a stable nodule formation. If there is, it means that the model is successfully constructed, and subsequent experiments can be carried out.
(4)将小鼠体重和瘤体大小差异不大的小鼠随机分组,分为Vehicle组、SPA组和LM-2I组,每组8只。(4) The mice with little difference in body weight and tumor size were randomly divided into Vehicle group, SPA group and LM-2I group, each with 8 mice.
(5)根据前期预实验的结果,我们确定的给药剂量为SPA为10mg/kg/d,LM-2I为5mg/kg/d,皮下注射给药,考虑到SPA水溶性差,我们使用的溶剂为DMSO:吐温80(1:1),每次给药剂量为0.1mL,隔日给药,并测量小鼠的体重和瘤体长短径,观察小鼠生活状态并记录下是否出现异常。按一下公式计算瘤(5) According to the results of the preliminary experiment, we determined the dosage of SPA as 10mg/kg/d, LM-2I as 5mg/kg/d, subcutaneous injection, taking into account the poor water solubility of SPA, the solvent we used It is DMSO: Tween 80 (1:1), each administration dose is 0.1mL, administered every other day, and measure the weight of the mouse and the length of the tumor, observe the life of the mouse and record whether there is any abnormality. Click the formula to calculate the tumor
体体积:
(a为瘤体最长径,b为最短径)。
Body volume: (a is the longest diameter of the tumor, b is the shortest diameter).
(6)当Vehicle组小鼠肿瘤体积≥1000mm
3,结束给药,次日给小鼠注射戊巴比妥钠安乐死。
(6) When the tumor volume of the mice in the Vehicle group was ≥1000 mm 3 , the administration was ended, and the mice were euthanized by injection of sodium pentobarbital the next day.
结果显示,给药28天后,Vehicle组肿瘤体积1076.65±230.41mm
3;SPA(10mg/kg/d)体积259.48±88.82mm
3,与Vehicle相比降低75.90%,有统计学差异;LM-2I(5mg/kg/d)组体积为143.91±70.42mm
3,与Vehicle相比降低86.63%,有统计学差异。从抑制效果来看,LM-2I(5mg/kg/d)优于SPA(10mg/kg/d),且LM-2I药物浓度只有SPA的一半(图14)。
The results showed that after 28 days of administration, the tumor volume of Vehicle group was 1076.65±230.41mm 3 ; the volume of SPA (10mg/kg/d) was 259.48±88.82mm 3 , which was reduced by 75.90% compared with Vehicle, with statistical difference; LM-2I( The volume of 5mg/kg/d) group was 143.91±70.42mm 3 , which was reduced by 86.63% compared with Vehicle, which was statistically different. In terms of the inhibitory effect, LM-2I (5mg/kg/d) is better than SPA (10mg/kg/d), and the drug concentration of LM-2I is only half of that of SPA (Figure 14).
实验结果证实SPA和衍生物LM-2I能有效抑制ASS1低表达型肿瘤生长。多杀菌素及其衍生物可用于ASS1低表达等缺陷性肿瘤的个体化治疗。Experimental results confirm that SPA and its derivative LM-2I can effectively inhibit the growth of tumors with low ASS1 expression. Spinosyn and its derivatives can be used for individualized treatment of defective tumors such as low expression of ASS1.