WO2021043169A1 - Antibody that binds specifically to b-cell maturation antigen and use thereof - Google Patents

Antibody that binds specifically to b-cell maturation antigen and use thereof Download PDF

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WO2021043169A1
WO2021043169A1 PCT/CN2020/113046 CN2020113046W WO2021043169A1 WO 2021043169 A1 WO2021043169 A1 WO 2021043169A1 CN 2020113046 W CN2020113046 W CN 2020113046W WO 2021043169 A1 WO2021043169 A1 WO 2021043169A1
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car
antibody
cell
cells
antigen
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Chinese (zh)
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刘江海
曾昕
刘彬
孔洋
曾顺泽
林静
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成都盛世君联生物技术有限公司
成都盛世锐科生物技术有限公司
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Priority to CN202080077674.5A priority Critical patent/CN114667294B/en
Publication of WO2021043169A1 publication Critical patent/WO2021043169A1/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/395Antibodies; Immunoglobulins; Immune serum, e.g. antilymphocytic serum
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705Receptors; Cell surface antigens; Cell surface determinants
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    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/30Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/62DNA sequences coding for fusion proteins
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    • C12N5/00Undifferentiated human, animal or plant cells, e.g. cell lines; Tissues; Cultivation or maintenance thereof; Culture media therefor
    • C12N5/10Cells modified by introduction of foreign genetic material
    • C12N5/12Fused cells, e.g. hybridomas
    • C12N5/16Animal cells

Definitions

  • the invention relates to the field of biomedicine, in particular to an antibody that specifically binds to a mature antigen of B cells, and its preparation and application.
  • T cells are a type of lymphocytes and play an important role in cell-mediated immunity. It differs from other lymphocytes (such as B cells and natural killer cells (NK cells)) in the presence of T cell receptors (TCR) on the cell surface.
  • T helper cells also known as CD4 + T or CD4 T cells, express CD4 glycoprotein on their surface. Helper T cells are activated when exposed to peptide antigens presented by MHC (major histocompatibility complex) class II molecules. Once activated, such cells proliferate rapidly and secrete cytokines that can regulate immune responses. Cytotoxic T cells, also known as CD8 + T cells or CD8 T cells, express CD8 glycoprotein on the cell surface.
  • CD8 + T cells are activated when exposed to peptide antigens presented by MHC class I molecules.
  • Memory T cells are a subset of T cells that exist for a long time and respond to related antigens, thus providing the immune system with memories of past infections and/or tumor cells.
  • CAR-T T cells modified by chimeric antigen receptor
  • the CAR gene is an artificially designed gene fragment. Its encoded protein mainly includes an extracellular recognition domain and an intracellular signal transduction domain: the former is a specific antibody fragment used to target and recognize specific molecules on the tumor surface; the latter is used to start Immune cell response after specific recognition plays a role in cellular immunity.
  • T cells can produce chimeric antigen receptors on their surface.
  • CAR is a protein that allows T cells to recognize specific proteins (antigens) on tumor cells. Genetically engineered CAR T cells can grow in the laboratory until their number reaches billions. The expanded CART cells can then be infused into the patient.
  • BCMA B Cell Maturation Antigen
  • BAFF B cell activating factor
  • APRIL proliferation-inducing ligand
  • CN109134665A also discloses a single domain antibody-based BCMA chimeric antigen receptor and its application.
  • the present invention provides an antibody against BCMA and CAR-T cells based on the antibody, as well as preparation and application thereof.
  • the CAR-T cells can specifically recognize and kill tumors, and have more efficient tumor killing activity, such as multiple myeloma (MM) and acute myeloid leukemia (AML).
  • MM multiple myeloma
  • AML acute myeloid leukemia
  • the present invention provides an anti-BCMA antibody or antigen-binding fragment thereof that can bind to human BCMA polypeptide, which can competitively bind to SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: one of the human BCMA epitopes bound by a single variable heavy chain (VHH) shown in one of 23-38.
  • VHH variable heavy chain
  • the anti-BCMA antibody or antigen-binding fragment thereof comprises a single weight as shown in one of SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: 23-38
  • the heavy chain complementarity determining regions of the variable chain region (VHH) H-CDR1, H-CDR2 and H-CDR3 or their humanized variant sequences for example, the H-CDR1, H-CDR2 and H-CDR3 are selected respectively One or more CDRs shown in any one of SEQ ID NO: 10-12 or their identity sequences; one or more CDRs shown in any one of SEQ ID NO: 16-18 or Its identity sequence; or one or more CDRs or its identity sequence shown in any one of SEQ ID NO: 20-22.
  • the antibody or antigen-binding fragment thereof of the present invention comprises the heavy chain variable region sequence shown in SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19 or its humanized sequence Or an amino acid sequence that has at least 80% sequence identity with one of SEQ ID NO: 2, SEQ ID NO: 15, or SEQ ID NO: 19, or SEQ ID NO: 23-38.
  • the identity sequence of SEQ ID NO: 10 refers to the heavy chain complementarity determining region 1 (H-CDR1) that has at least 80% sequence identity with SEQ ID NO: 10, the coding sequence of which may be exemplarily SEQ ID NO: 10 ID NO: 7);
  • SEQ ID NO: 11 refers to the heavy chain complementarity determining region 2 (H-CDR2) that has at least 80% sequence identity with SEQ ID NO: 11, and its coding sequence may be, for example, SEQ ID NO: 8 );with
  • SEQ ID NO: 12 refers to the heavy chain complementarity determining region 3 (H-CDR3) that has at least 80% sequence identity with SEQ ID NO: 12, and its coding sequence may be, for example, SEQ ID NO: 9 ).
  • the antibody or antigen-binding fragment of the present invention can be selected from the following group: camel Ig, Ig NAR, Fab fragment, Fab' fragment, F(ab)' 2 fragment, F(ab)' 3 fragment, Fv , ScFv, double-scFv, (scFv) 2 , mini-antibodies, diabodies, tri-chain antibodies, four-chain antibodies, disulfide-stabilized Fv proteins and single domain antibodies (sdAbs, Nanobodies), bispecific antibodies Or trispecific antibodies and so on.
  • the present invention also provides a fusion protein, which comprises the above-mentioned antibody or antigen-binding fragment.
  • the fusion protein described in the present invention may also include a tag sequence (such as Poly-His, Hemagglutinin, c-Myc, GST, Flag-tag, etc.) or an IgG1-Fc protein sequence, with additional epitopes (such as for human Other epitopes of BCMA) or additional antibody active fragments (such as antibodies or antibody active fragments directed against other epitopes of human BCMA or the same epitope, or ligands capable of binding to human BCMA), preferably, the fusion protein has SEQ ID NO: The sequence shown in 4.
  • the present invention also provides an antibody-drug conjugate comprising the antibody or antigen-binding fragment described in the present invention.
  • the drug is selected from the following: radiolabels, 32 P, 35 S, fluorescent dyes, electron compacting reagents, enzymes, biotin, streptomyces Avidin, digitoxin, hapten, immunogenic protein, nucleic acid molecule having a sequence complementary to the target, or any combination of the foregoing; or immunomodulatory compound, anticancer agent, antiviral agent, antibacterial agent, antibacterial Fungal agents and antiparasitic agents, or any combination of the foregoing.
  • the present invention also provides a chimeric antigen receptor (CAR), which comprises: (1) an extracellular antigen-binding domain comprising the antibody or antigen-binding fragment, fusion protein or antibody-drug conjugate described in the present invention ; And optionally include (2) a transmembrane domain; and, (3) an intracellular signaling domain.
  • CAR chimeric antigen receptor
  • the transmembrane domain is derived from ⁇ , ⁇ , or ⁇ chains selected from the group consisting of T cell receptors, CD3 ⁇ , CD4, CD5, CD8, CD8 ⁇ , CD9, CD16, CD22, One or more transmembrane domains in the group consisting of CD28, CD33, CD37, CD45, CD80, CD86, CD134, CD137, CD152, CD154, ICOS and PD1.
  • the intracellular signal transduction domain includes a costimulatory signal transduction domain and is selected from: CD2, CD3 ⁇ , CD3 ⁇ , CD3 ⁇ , CD3 ⁇ , CD4, CD5, CD7, CD22, CD27 One or more of, CD28, CD30, CD40, CD66d, CD79a, CD79b, CD83, CD134, CD137, ICOS, CD154, 4-1BB and OX40, LFA-1, LIGHT, NKG2C and B7-H3.
  • the CAR of the present invention may also exemplarily include a hinge domain located between the C-terminus of the extracellular antigen binding domain and the N-terminus of the transmembrane domain.
  • the hinge domain is derived from CD8 ⁇ .
  • the antibody or antigen fragment is conjugated with a drug as in the antibody-drug conjugate of the present invention, or is fused with an additional polypeptide or fusion protein as in the fusion protein of the present invention.
  • the protein for example, is fused with an antibody against another epitope of human BCMA, such as a single domain antibody, or fused with a ligand capable of binding to human BCMA.
  • the CAR of the present invention has the sequence shown in SEQ ID NO: 6 or an amino acid sequence having at least 80% sequence identity with SEQ ID NO: 6.
  • the present invention also provides a polynucleotide, which is a polynucleotide encoding the antibody or antigen-binding fragment of the present invention, the fusion protein of the present invention, or the CAR of the present invention,
  • polynucleotide encoding the antibody or antigen-binding fragment of the present invention is shown in SEQ ID NO: 1 or its degenerate sequence;
  • polynucleotide encoding the fusion protein of the present invention is shown in SEQ ID NO: 3 or its degenerate sequence; or
  • the polynucleotide encoding the CAR of the present invention is shown in SEQ ID NO: 5 or its degenerate sequence.
  • the present invention also provides an isolated CAR-T cell or CAR-NK cell, characterized in that the CAR-T cell or CAR-NK cell can express the antibody or antigen-binding fragment of the present invention; CAR-T cells or CAR-NK cells can express the fusion protein of the present invention; the CAR-T cells or CAR-NK cells can express the antibody-drug conjugate of the present invention; the CAR-T cells Or CAR-NK cells can express the CAR of the present invention; the CAR-T cells or CAR-NK cells contain the polynucleotide of the present invention.
  • the CART cells of the present invention are CD4+ T cells or a cell mixture containing CD4+ T cells and CD8+ T cells.
  • the present invention also provides a vector comprising the polynucleotide according to the present invention.
  • the vector is an expression vector, such as a viral vector, preferably a retroviral vector, such as a lentiviral vector, preferably selected from the group consisting of human immunodeficiency virus 1 (HIV-1), human immunodeficiency virus 2 (HIV- 2) Wisner-Medi virus (VMV) virus, goat arthritis-encephalitis virus (CAEV), equine infectious anemia virus (EIAV), feline immunodeficiency virus (FIV), bovine immunodeficiency virus (BIV) And Simian Immunodeficiency Virus (SIV).
  • a retroviral vector such as a lentiviral vector, preferably selected from the group consisting of human immunodeficiency virus 1 (HIV-1), human immunodeficiency virus 2 (HIV- 2) Wisner-Medi virus (VMV) virus, goat arthritis-encephalitis virus (CAEV), equine infectious anemia virus (EIAV), feline immunodeficiency virus (FIV), bovine immunodeficiency
  • the present invention also provides an immune effector cell, which comprises the CAR according to the present invention, or comprises the polynucleotide according to the present invention, or comprises the vector according to the present invention.
  • the immune effector cells of the present invention are T lymphocytes or natural killer cells.
  • the present invention also provides a pharmaceutical composition
  • a pharmaceutical composition comprising the CAR-T cell or CAR-NK cell according to the present invention, or the immune effector cell according to the present invention, and optionally, a pharmaceutically acceptable Carrier or auxiliary material.
  • the present invention also provides a method for preparing the CAR-T cell or CAR-NK cell of the present invention, or preparing the immune effector cell of the present invention, which comprises introducing the carrier of the present invention into T lymphocytes Or natural killer cells.
  • the preparation method of CAR-T cells of the present invention includes the following steps:
  • step (1) Use the lentiviral packaging plasmid and the lentiviral expression vector plasmid obtained in step (1) to infect 293T cells, package and prepare the lentivirus;
  • step (3) Infect T cells with the lentivirus obtained in step (2) to obtain CAR-T cells.
  • the present invention also provides the use of materials of the following items in the preparation of medicines for the treatment and/or prevention of cancer:
  • the cancer is a tumor that highly expresses B-cell mature antigens and related diseases, such as multiple myeloma and acute myeloid leukemia, preferably recurrent multiple myeloma.
  • the present invention also provides a method for treating and/or preventing cancer, which comprises combining an effective amount of (a) the antibody or antigen-binding fragment thereof of the present invention, (b) the fusion protein of the present invention, and (c) the present invention.
  • the antibody-drug conjugate of the present invention (d) the CAR of the present invention; (e) the CAR-T cell or CAR-NK cell of the present invention; or (f) the immune effect of the present invention
  • the cells are administered to the subject.
  • the present invention also considers their variants, such as their identity sequences or humanized sequences.
  • sequence of identity refers to about 70% or more, 71% or more, 72% or more, 73% or more, 74% or more, 75% or more with the original sequence or the reference sequence.
  • the present invention also considers its degenerate sequence or complementary sequence.
  • the homology between the degenerate sequence and the original sequence or the reference sequence is about 60% or more, about 70% or more, 71% or more, 72% or more, 73% or more, 74% or more , 75% or more, 76% or more, 77% or more, 78% or more, 79% or more, 80% or more, 81% or more, 82% or more, 83% or more, 84% or more , 85% or above, 86% or above, 87% or above, 88% or above, 89% or above, 90% or above, 91% or above, 92% or above, 93% or above, 94% or above , 95% or above, 96% or above, 97% or above, 98% or above, 99% or above, 99.1 or above, 99.2 or above, 99.3% or above, 99.4% or above, 99.5% or above, 99.6% % Or more, 99.7% or more, 99.
  • the CAR provided by the present invention can specifically bind to the tumor-specific antigen B cell mature antigen, and activate the T cell through the transmembrane domain and the costimulatory signal conduction region.
  • the CAR-T cell can express a fusion protein with a B cell mature antigen as a target antigen, and therefore can specifically kill tumor cells for the treatment of tumor diseases, for example, for the treatment of tumors with high expression of B cell mature antigen.
  • Multiple myeloma also known as plasmacytoma, is a B-cell lymphoma that is currently incurable. It is derived from a malignantly transformed plasma cell clone. The disease usually recurs and drug resistance develops after a multi-line treatment regimen.
  • the CART or NK cells against BMCA of the present invention can target B cell maturation antigen (BMCA), and then can be used to treat BMCA-related cancers, such as multiple myeloma or acute myeloid leukemia, because BCMA is in multiple bone marrow It is highly expressed in tumor cells and acute myeloid leukemia, but not in normal B cells or precursor B cells.
  • B-NHL non-Hodgkin’s lymphoma
  • B-NHL non-Hodgkin’s lymphoma
  • BCMA can be used as a suitable target. Therefore, the high-affinity anti-BCMA CAR-T or NK cells of the present invention should also be used therapeutically for B-NHL.
  • the anti-BCMA CAR of the present invention confers extremely high affinity to T cells or NK cells, it can also be used to identify B-cell lymphomas with low BCMA expression.
  • the anti-BCMA CAR-T or -NK of the present invention is not reactive to normal T cells, B cells, NK cells, endothelial cells, all bone marrow cell lineages and their precursor cells. Therefore, the anti-BCMA CAR-T or -NK of the present invention has no undesirable reactivity to bone marrow cell precursors.
  • the anti-BCMA CAR-T of the present invention can be used to treat a variety of lymphomas, multiple myeloma tumor cells and acute myeloid leukemia and B-NHL, such as follicular lymphoma, diffuse large B-cell lymphoma , Mantle cell lymphoma and chronic lymphocytic leukemia.
  • the anti-BCMA CAR-T cells of the present invention specifically recognize the BCMA antigen on RPMI 8226 (human multiple myeloma cell line), and activate the T cell immune response through the activation domain of the CAR molecule. Induces the lysis of the target cell RPMI 8226; the target cell releases LDH (lactate dehydrogenase) after lysis. By detecting the LDH level in the reaction system, compared with the control group, the actual cytotoxicity of CAR-T cells can be measured.
  • RPMI 8226 human multiple myeloma cell line
  • the CAR contains an extracellular extracellular domain derived from an antibody and an intracellular domain containing a signaling module derived from a T cell signaling protein.
  • the extracellular domain may comprise a heavy chain variable region derived from an immunoglobulin, or a variable region comprising a heavy chain and a light chain, for example, is constructed as a single chain variable fragment (scFv), preferably only Single domain antibody (sdAb) with heavy chain variable region.
  • the sdAb is connected to the hinge region, which provides flexibility and transmits signals to the intracellular signaling domain through the transmembrane domain.
  • the transmembrane domain is preferably derived from CD8 ⁇ .
  • the intracellular signaling domain is composed of the zeta chain of the TCR complex.
  • the second generation CAR is designed to contain a single costimulatory domain derived from CD28 or 4-1BB.
  • the third generation CAR includes two costimulatory domains, such as 4-1BB-CD3 ⁇ .
  • the invention preferably relates to a second or third generation CAR.
  • CAR chimeric antigen receptors
  • BCMA an antigen specifically with the intracellular domain of activated T cell receptor or NK cell receptor.
  • chimeric refers to being composed of different proteins or DNA from different sources.
  • the CAR of the present invention includes an extracellular domain (also referred to as a binding domain or an antigen binding domain) that binds to BCMA, a transmembrane domain, and an intracellular domain or an intracellular signaling domain.
  • the binding of the anti-BCMA antigen binding domain of the CAR to the BCMA on the surface of the target cell results in the aggregation of the CAR and delivers an activation stimulus to the CAR-containing cells.
  • CAR can specifically redirect immune effector cells, thereby triggering proliferation, cytokine production, phagocytosis, or cell killing of target antigen-expressing cells.
  • the CAR includes the following domains: a humanized extracellular binding domain that specifically binds to BCMA; a transmembrane domain; and one or more intracellular signaling domains.
  • the CAR sequentially comprises the extracellular binding domain of a humanized BCMA antigen-binding fragment; one or more spacer regions; a transmembrane domain; and one or more intracellular signaling domains.
  • Extracellular binding domain can be used interchangeably and provide CAR with the ability to specifically bind to the target antigen of interest BCMA.
  • the binding domain can be derived from natural, synthetic, semi-synthetic or recombinant sources.
  • the sdAb of recombinant origin is preferred.
  • Specific binding should be as understood by those skilled in the art, and those skilled in the art are clearly aware of various experimental methods or means that can be used to test binding and binding specificity. Methods of determining equilibrium association or equilibrium dissociation constants are known in the art. In many protein-protein interactions, some cross-reactions or background binding may occur, but this does not damage the "specificity" of the binding between CAR and epitope. "Specific binding” describes the binding of an anti-BCMA antibody or its antigen-binding fragment (also including their CAR) to BCMA, and its binding affinity is higher than background binding.
  • Antigen (Ag) refers to a compound, composition, or substance that can stimulate antibody production or T cell response in an animal.
  • the target antigen is an epitope of a BCMA polypeptide.
  • Epitope refers to the region of an antigen that binds to a binding agent. Epitopes can be formed by consecutive amino acids, or non-contiguous amino acids that result in the tertiary structure of the protein.
  • a "single chain Fv” or “scFv” antibody fragment comprises the VH domain and the VL domain of an antibody, where these domains exist as a single polypeptide chain and in either direction (for example, VL-VH or VH-VL).
  • the scFv polypeptide also contains a polypeptide linker between the VH domain and the VL domain, which allows the scFv to form the desired structure for antigen binding.
  • the CAR of the present invention comprises an antigen-specific binding domain, which is a scFv and can be a murine, human or humanized scFv.
  • the single-chain antibody can be cloned from the V region gene of the hybridoma specific for the desired target.
  • the antigen-specific binding domain is a humanized scFv that binds to a human BCMA polypeptide.
  • variable heavy chains suitable for constructing the anti-BCMA CAR of the present invention include but are not limited to the amino acid sequence shown in SEQ ID NO: 2.
  • variable light chain suitable for constructing the anti-BCMA CAR of the present invention include any variable light chain of an anti-BCMA antibody, including but not limited to the variable light chain in CN109641012A.
  • the CAR contains an extracellular antigen binding domain, which contains an antibody or antibody fragment that binds to a B cell maturation antigen (BCMA) polypeptide. Therefore, the antibodies or antibody fragments of the present invention include but are not limited to polyclonal, monoclonal, bispecific, human, humanized or chimeric antibodies, single chain fragments (scFv), single variable fragments (ssFv), single Domain antibodies (such as VHH fragments from Nanobodies), Fab fragments, F(ab′) 2 fragments, fragments generated from Fab expression libraries, anti-idiotypic antibodies and epitope binding fragments or any combination of the above, provided that they It has the similar binding characteristics of the CAR of the present invention, and preferably comprises the corresponding CDR, or VH and VL regions as described herein.
  • the immunoglobulin molecules of the present invention can be of any class (ie, IgG, IgE, IgM, IgD, and IgA) or subclasses of immunoglobulin molecules. Therefore, as used herein, the term antibody also includes antibodies and antibody fragments comprised by the CAR of the present invention, which are produced by modifying intact antibodies or re-synthesized using recombinant DNA methods.
  • antibody generally refers to a protein consisting of one or more polypeptides substantially encoded by immunoglobulin genes or immunoglobulin gene fragments. When the term “antibody” is used, it can also be considered to mean “antibody fragment”.
  • antibodies or antibody fragments can be chemically conjugated with other proteins or fusion proteins of other proteins, or expressed as fusion proteins with other proteins.
  • the antibody or antigen-binding fragment of the invention is contained on a multispecific antibody, such as a bispecific antibody.
  • Such multispecific antibodies can be produced by known methods, such as cross-linking two or more of the same type or different types of antibodies, antigen-binding fragments (e.g., scFv). Exemplary methods for preparing multispecific antibodies include those described in PCT Patent Publication No. WO2013/163427, which is incorporated herein by reference in its entirety.
  • the affinity of the binding domain polypeptide of the present invention and the antibody or antibody fragment or CAR protein can be easily determined using conventional techniques, for example, by competitive ELISA (enzyme-linked immunosorbent assay), or using a surface plasmon resonance device (such as Biacore).
  • a humanized antibody can be prepared using methods known in the art, the humanized antibody comprising one or more CDRs of the antibody or antibody fragment of the present invention or one or more CDRs derived from the antibody or antibody fragment. For example, four steps can generally be used to humanize a monoclonal antibody: (1) Determine the nucleotide and predicted amino acid sequences of the light chain and heavy chain variable domains of the starting antibody; (2) Design the humanized antibody , That is, decide which antibody framework region to use in the humanization process; (3) carry out humanization methods/techniques; and (4) transfection and expression of humanized antibodies. For example, see, U.S. Patent No. 6,180,370.
  • humanized antibody means that at least a part of the framework region and optionally a part of the CDR region or other regions involved in binding of the immunoglobulin are derived from or adjusted to human immunoglobulin sequences.
  • Humanized, chimeric or partially humanized forms of mouse monoclonal antibodies can be prepared, for example, by recombinant DNA technology. Linking the CDR regions of non-human antibodies with human constant regions by recombinant DNA technology can produce humanized mouse antibodies (Queen et al., 1989; WO 90/07861).
  • the monoclonal antibody used in the method of the present invention may be a human monoclonal antibody. Human antibodies can be obtained, for example, using the phage display method (WO 91/17271; WO 92/01047).
  • a humanized antibody also refers to the form of a non-human (e.g., murine, camel, llama, shark) antibody, which is a specific chimeric immunoglobulin, immunoglobulin containing minimal sequence derived from non-human immunoglobulin.
  • Globulin chains or fragments thereof e.g. Fv, Fab, Fab', F(ab') 2 or other antigen binding subsequences of antibodies, such as vHH.
  • a human or humanized antibody or antibody fragment refers to an antibody having an amino acid sequence corresponding to the amino acid sequence of a human-produced antibody, and can be prepared using any technique known in the art for preparing antibodies. Human antibodies or fragments thereof can be selected through competitive binding experiments or other methods to determine that they have the same epitope binding specificity as a specific mouse antibody.
  • variable region of an antibody refers to the variable region of an antibody light chain alone or the variable region of an antibody heavy chain or a combination of both.
  • the heavy chain variable region and the light chain variable region each consist of four framework regions (FR) connected by three complementarity determining regions (CDR), which are also referred to as hypervariable regions.
  • the CDRs in each chain are held in close proximity by FRs, and together with CDRs from other chains, contribute to the formation of the antigen binding site of the antibody.
  • CDR is mainly responsible for binding antigen epitopes.
  • There are many methods that can be used to determine the boundaries of CDR amino acid sequences such as Kabat et al., Sequences of Proteins of Immunological Interest, (5th edition, 1991, National Institutes of Health, Bethesda Md, "Kabat” numbering scheme); Al-Lazikani B , Lesk AM, Chothia C. Standard conformations for the canonical structures of immunoglobulins. J. Mol. Biol. 1997; 273: 927-48 (“Chothia” numbering plan); Lefranc et al.
  • IMGT unique numbering for immunoglobulin and T cell receptor varia ble domain sand Ig superfamily V-like domains “Dev.Comp.Immunol.,27:55-77,2003; "IMGT” numbering scheme); or North,B,LehmannA,Dunbrack RA new clustering of antibodyCDR loop conformations: J.Mol.Biol.(2011),406(2):228-256.
  • alternative methods include new solutions developed with the development of bioinformatics.
  • Kabat is the most commonly used method
  • CDR can refer to a CDR defined by one or more methods, or by a combination of these methods.
  • Table 1 below shows the positions of the heavy chain variable region CDRs in the respective VHHs according to the North, Kabat, Chothia, and IMGT numbering schemes.
  • the CDRs referred to herein may be CDRs or CDR combinations determined by the same method, or CDRs or CDR combinations determined by different methods.
  • the antibody of the present invention may contain HCDR1, HCDR2, and HCDR3 of one of Lead1-19 determined by any of North, Kabat, Chothia, and IMGT.
  • the antibody of the present invention contains HCDR1, HCDR2 of Lead1 determined by North and HCDR3 of one of Lead2-19 determined by Kabat.
  • Those skilled in the art can freely choose the CDRs identified by different methods, and can freely combine these CDRs.
  • the present invention provides an antibody or fragment thereof contained in a CAR, wherein the antibody or fragment thereof comprises at least one CDR, at least two, or at least three CDRs that are substantially the same as the antibody of the present invention.
  • the at least one, two, or three CDRs have at least about 70%, 75%, 85%, 86%, 87%, and at least one, two, or three CDRs of the antibody of the present invention. 88%, 89%, 90%, 95%, 96%, 97%, 98%, or 99% identity. It should be understood that for the purposes of the present invention, the binding specificity and/or overall activity is generally retained, although the degree of activity may vary (which may be larger or smaller) compared to the antibody.
  • each CDR may be unaltered or contain no more than one, two or three amino acid substitutions, insertions or deletions.
  • one, two or three amino acids of the CDR sequence SEQ ID NO: 10, 11 or 12 contained in the antibody of the present invention can be replaced, inserted or deleted by the same amino acid, and still retain the ability to bind to human BCMA .
  • one, two or three amino acids of the CDR sequence SEQ ID NO: 16, 17, or 18 contained in the antibody of the present invention can be replaced, inserted or deleted by the same type of amino acid, and still retain the ability to bind to human BCMA.
  • one, two or three amino acids of the CDR sequence SEQ ID NO: 20, 21 or 22 contained in the antibody of the present invention can be replaced, inserted or deleted by the same amino acid, and still retain the ability to bind to human BCMA .
  • the antibody of the present invention includes Lead1, Lead2, Lead3, Lead4, Lead5, Lead6, Lead7, Lead8, Lead9, Lead10, Lead11, Lead12, Lead13, Lead14, Lead15, Lead16, Lead17, Lead18, Or Lead19's HCDR1, HCDR2, and HCDR3 identified by the same method, or a combination of HCDR1, HCDR2, and HCDR3 identified by different methods.
  • alanine scanning mutagenesis This method that can be used to identify residues or regions of antibodies that can be targeted for mutation is called "alanine scanning mutagenesis.”
  • residues or a set of target residues e.g., charged residues such as arg, asp, his, lys, and glu
  • neutral or negatively charged amino acids e.g., alanine or polyalanine
  • Acid to determine whether the interaction between the antibody and the antigen is affected. It may be considered to introduce additional substitutions at amino acid positions that show functional sensitivity to the initial substitution.
  • the crystal structure of the antigen-antibody complex is used to identify contact points between the antibody and the antigen. Such contact residues and neighboring residues can be targeted as replacement candidates.
  • Variants can be screened to determine whether they contain the desired properties.
  • the Lead 3 antibody still remains active. In other words, after replacing 5 amino acid residues, the mutant antibody still retains activity.
  • the CAR of the present invention may include linker residues between each domain added for proper spacing and conformation of the molecule, such as a linker containing an amino acid sequence, which connects the VH domain and the VL domain and provides The compatible spacer function of the interaction of the two sub-binding domains allows the resulting polypeptide to maintain specific binding affinity for the target molecule.
  • the CAR of the present invention may contain one, two, three, four, or five or more linkers.
  • the length of the linker is about 1 to about 25 amino acids, about 5 to about 20 amino acids, or about 10 to about 20 amino acids, or any suitable length of amino acids.
  • linkers include glycine polymers; glycine-serine polymers; glycine-alanine polymers; alanine-serine polymers; other flexible linkers known in the art, such as Whitlow linkers.
  • Glycine and glycine-serine polymers are relatively unstructured, and therefore can be used as links between domains or some of the domains (such as the CAR described herein) of the fusion protein.
  • the CAR binding domain is followed by one or more "spacers” or “spacer polypeptides", which are equivalent to linkers, which move the antigen-binding domain away from the surface of the effector cell so that the cell-to-cell interaction Appropriate contact, antigen binding and activation are possible.
  • the spacer region is part of an immunoglobulin, including but not limited to one or more heavy chain constant regions, such as CH2 and CH3.
  • the spacer region may include the amino acid sequence of a naturally occurring immunoglobulin hinge region or an altered immunoglobulin hinge region.
  • the spacer region includes the CH2 and CH3 domains of IgG1 or IgG4.
  • the binding domain of the CAR may be followed by one or more "hinge domains", which move the antigen binding domain away from the surface of the effector cell to enable proper cell-to-cell contact, antigen binding, and activation.
  • the CAR may contain one or more hinge domains between the binding domain and the transmembrane domain (TM).
  • the hinge domain can be of natural, synthetic, semi-synthetic or recombinant origin.
  • the hinge domain may include the amino acid sequence of a naturally occurring immunoglobulin hinge region or an altered immunoglobulin hinge region.
  • hinge domains suitable for use in the CARs described herein include hinge regions derived from the extracellular region of type 1 membrane proteins (e.g., CD8 ⁇ , CD4, CD28, PD1, CD152, and CD7), which can be wild-type hinges from these molecules Zone, or can be changed.
  • the hinge domain comprises a PD1, CD152, or CD8 ⁇ hinge region.
  • the "transmembrane domain” is a part of the CAR, which fuses the extracellular binding part and the intracellular signal transduction domain and anchors the CAR on the plasma membrane of immune effector cells.
  • the TM domain can be derived from natural, synthetic, semi-synthetic or recombinant sources.
  • the TM domain can be derived from the ⁇ , ⁇ or ⁇ chain of the T cell receptor, CD3 ⁇ , CD3 ⁇ , CD4, CD5, CD8 ⁇ , CD9, CD16, CD22, CD27, CD28, CD33, CD37, CD45, CD64, CD80, CD86, CD134 , CD137, CD152, CD154 and PD1.
  • the CAR of the present invention comprises a TM domain derived from CD8 ⁇ or CD28.
  • the CAR of the present invention includes an intracellular signaling domain.
  • Intracellular signaling domain refers to the information involved in the effective anti-BCMACAR and human BCMA polypeptide binding to the inside of immune effector cells to trigger effector cell functions (such as activation, cytokine production, proliferation and cytotoxic activity, the Cytotoxic activity includes the release of cytotoxic factors to the target cells bound by the CAR or other cellular responses triggered by antigen binding to the extracellular CAR domain.
  • effector function refers to the specialized function of immune effector cells.
  • the effector function of T cells may be cytolytic activity or assistance or activity including cytokine secretion.
  • intracellular signal transduction domain refers to the part of a protein that transduces effector function signals and directs cells to perform specialized functions.
  • the CAR of the present invention contains one or more costimulatory signal transduction domains to enhance the efficacy, expansion and/or memory formation of T cells expressing CAR receptors.
  • costimulatory signaling domain refers to the intracellular signaling domain of CAR molecules, which provides a second signal required for the effective activation and function of T lymphocytes after binding to an antigen.
  • the CAR of the present invention includes the antibody of the present invention.
  • the CAR of the present invention can also be used with other antibodies of the present invention, such as Lead2, Lead3, Lead4, Lead5, Lead6, Lead7, Lead8, Lead9, Lead10, The CAR obtained by replacing Lead1 in SEQ ID NO: 6 with Lead11, Lead12, Lead13, Lead14, Lead15, Lead16, Lead17, Lead18, or Lead19.
  • Proteins can be used interchangeably, unless otherwise stated, and according to conventional meaning, that is, used as an amino acid sequence. Proteins are not limited to a specific length. For example, they can include full-length protein sequences or fragments of full-length proteins, and can include post-translational modifications of polypeptides (such as glycosylation, acetylation, phosphorylation, etc.) and include naturally-occurring and non- Naturally occurring other modifications known in the art.
  • post-translational modifications of polypeptides such as glycosylation, acetylation, phosphorylation, etc.
  • the CAR polypeptide or protein of the present invention includes a signal (or leader region) sequence at the N-terminus of the protein that can direct protein transfer during or after translation.
  • a signal (or leader region) sequence at the N-terminus of the protein that can direct protein transfer during or after translation.
  • a variety of well-known recombinant and/or synthetic techniques can be used to prepare polypeptides.
  • the polypeptide of the present invention specifically includes the CAR of the present disclosure, or has a sequence that deletes, adds, and/or replaces one or more (for example, 1-20, 1-10, or 1-5) amino acids of the CAR disclosed herein .
  • polynucleotide refers to mRNA, RNA, genomic RNA (gRNA), positive-strand RNA (RNA(+)), negative-strand RNA (RNA(-)), genomic DNA (gDNA), complementary DNA (cDNA) or recombinant DNA.
  • Polynucleotides include single-stranded and double-stranded polynucleotides.
  • the polynucleotide of the present invention includes at least about 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79% of any reference sequence described herein.
  • sequence identity polynucleotides or variants usually wherein the variant retains at least one biological activity of the reference sequence.
  • a polynucleotide sequence encoding the binding domain of BCMA -CD8 ⁇ hinge-CD8 TM -4-1BB-CD3 ⁇ fusion proteins of the present invention is any DNA sequence capable of encoding any of the fusion protein, preferably, the sequence SEQ ID NO: 5 or its complementary sequence.
  • -4-1BB-CD3 ⁇ a polynucleotide sequence of the fusion protein may be under stringent conditions to SEQ ID NO encoded by the present invention, the BCMA binding domain -CD8 ⁇ hinge-CD8 TM: 5 polynucleotide sequence of Hybridize and encode the polynucleotide or its complementary sequence of the fusion protein;
  • stringent conditions may be any of low stringency conditions, medium stringency conditions, and high stringency conditions, and preferably high stringency conditions.
  • low stringency conditions may be 30°C, 5 ⁇ SSC, 5 ⁇ Denhardt solution, 0.5% SDS, 52% formamide
  • medium stringency conditions may be 40°C, 5 ⁇ SSC, 5 ⁇ The conditions of Denhardt solution, 0.5% SDS, 52% formamide
  • high stringency conditions can be 50°C, 5 ⁇ SSC, 5 ⁇ Denhardt solution, 0.5% SDS, 52% formamide.
  • those skilled in the art should understand that the higher the temperature, the more highly homologous polynucleotides can be obtained.
  • those skilled in the art can select a comprehensive result formed by multiple factors such as temperature, probe concentration, probe length, ionic strength, time, and salt concentration that affect the stringency of hybridization to achieve the corresponding stringency.
  • hybridizable polynucleotide can also be exemplified by the same search software as FASTA, BLAST, etc., when calculated with default parameters set by the system, it has a value of about 70% with that of the polynucleotide encoding SEQ ID NO: 5.
  • the identity of the nucleotide sequence can be determined using the algorithm rule BLAST of Karlin and Altschul (Proc.Natl.Acad.Sci.USA87:2264-2268,1990; Proc.Natl.Acad.Sci.USA90:5873,1993) .
  • Programs BLASTN and BLASTX based on BLAST algorithm rules have been developed (AltschulSF, etal: J Mol Biol 215:403, 1990).
  • nucleotide sequence encoding the polypeptide can be inserted into a suitable vector.
  • suitable vectors are plasmids, autonomously replicating sequences and transposable elements.
  • Additional exemplary vectors include, but are not limited to, plasmids, phagemids, cosmids, artificial chromosomes (e.g. yeast artificial chromosomes (YAC), bacterial artificial chromosomes (BAC) or P1-derived artificial chromosomes (PAC)), bacteriophages (e.g.
  • animal virus vectors include, but are not limited to, retroviruses (including lentiviruses), adenoviruses, adeno-associated viruses, herpes viruses (e.g., herpes simplex virus), poxviruses, baculoviruses, papillomaviruses, and papillomaviruses ( For example SV40).
  • retroviruses including lentiviruses
  • adenoviruses e.g., adeno-associated viruses
  • herpes viruses e.g., herpes simplex virus
  • poxviruses e.g., baculoviruses
  • papillomaviruses papillomaviruses
  • papillomaviruses papillomaviruses
  • expression vectors are the pClneo vector (Promega) for expression in mammalian cells; Lenti4/V5-DESTTM, pLenti6/V5-DESTTM, and Lenti4/V5-DESTTM for lentivirus-mediated gene transfer and expression in mammalian cells pLenti6.2/V5-GW/lacZ (Invitrogen).
  • the coding sequence of the chimeric protein disclosed herein can be linked to such an expression vector for expressing the chimeric protein in mammalian cells.
  • control element or "regulatory sequence” present in the expression vector is the untranslated region of the vector (such as the origin of replication, promoter, enhancer, translation initiation signal (SD sequence or Kozak sequence) intron, polyadenosine Acidified sequences, 5'and 3'untranslated regions), which interact with host cell proteins for transcription and translation.
  • the strength and specificity of such elements or sequences can vary. Depending on the vector system and host used, any number of suitable transcription and translation elements or sequences can be used, including ubiquitous expression promoters and inducible promoters.
  • Antibody-drug conjugate (ADC) technology is a target-directed technology that allows selective killing or inhibition of the growth or division of cancer cells.
  • ADC works by using antibodies to target cancer cells and then release toxic substances (i.e. drugs) in the cells, thereby triggering cell death.
  • ADC technology allows drugs to be accurately delivered to target cancer cells and released under specific conditions, while minimizing collateral damage to healthy cells, ADC technology increases the efficacy of therapeutic or targeted antibodies and reduces the risk of adverse reactions risk.
  • the basic structure of the antibody-drug conjugate can be "antibody-linker-pharmaceutical active molecule" or "antibody-pharmaceutical active molecule” (no linker).
  • the linker allows the drug to exhibit an effect on the target cancer cell, for example after separation from the antibody (e.g., by enzyme-mediated hydrolysis) and after the drug reaches the target cell.
  • the linker also plays a functional role by connecting the antibody and the drug.
  • the efficacy and toxicity of the antibody-drug conjugate thus depend in part on the stability of the linker, and therefore, the linker plays an important role in drug safety.
  • the linkers of the antibody-drug conjugates can be roughly classified as non-cleavable or cleavable. Many non-cleavable linkers are attached to antibodies using thioethers, which contain the cysteine of the antibody. Pendant drugs usually cannot be separated from the antibody in vivo, and reduced efficacy may also occur. In the case of the widely used thiol-maleimide method, the antibody-drug conjugate is unstable, which may cause the drug to separate from the conjugate before or after it reaches the target cell.
  • the cleavable linker can be, for example, hydrolyzed by a lysosomal enzyme.
  • the cleavable linker may comprise a disulfide bond, for example including the cysteine of an antibody.
  • the disulfide linker that is allowed to dissociate via the thiol exchange reaction relies to some extent on the uptake of the antibody-drug conjugate into the target cell and exposure of the disulfide to the cytosol as a reducing environment.
  • various types of thiols such as albumin and glutathione
  • the drug may be separated from the antibody before reaching its target.
  • linkers that are stable under physiological extracellular conditions.
  • linker with high plasma stability to improve therapeutic applicability, because the drug should only be released into the cell targeted by the protein to which the drug is attached, and not outside the cell.
  • the CAR of the present invention or the antibody of the present invention can still be conjugated with pharmacologically active molecules on the side of the antigen binding domain, such as erlotinib, lymphokines, botulinum toxin, affinity ligands, radiolabels, immunomodulatory compounds, anticancer Agents, ribozymes, etc.
  • pharmacologically active molecules such as erlotinib, lymphokines, botulinum toxin, affinity ligands, radiolabels, immunomodulatory compounds, anticancer Agents, ribozymes, etc.
  • a retroviral vector e.g., a lentiviral vector
  • a CAR is used to transduce cells (e.g., immune effector cells, such as T cells).
  • a carrier encoding CAR is used to transduce immune effector cells, the carrier comprising a humanized anti-BCMA antibody or antigen-binding fragment that binds to a BCMA polypeptide, and the humanized anti-BCMA antibody or antigen-binding fragment has a transmembrane domain and a cell. The internal signaling domain allows these transduced cells to trigger CAR-mediated cytotoxicity.
  • Retroviruses are a common tool for gene delivery.
  • retroviruses are used to deliver polynucleotides encoding chimeric antigen receptors (CAR) to cells.
  • CAR chimeric antigen receptors
  • the term "retrovirus” refers to an RNA virus that reverse transcribes its genomic RNA into a linear double-stranded DNA copy, and then covalently integrates its genomic DNA into the host genome. Once the virus is integrated into the host genome, it is called a "protovirus.”
  • the provirus serves as a template for RNA polymerase II and directs the expression of RNA molecules that encode structural proteins and enzymes required to produce new viral particles.
  • retroviruses suitable for specific embodiments include, but are not limited to: Moloney Murine Leukemia Virus (M-MuLV), Moloney Murine Sarcoma Virus (MoMSV), Harvey Murine Sarcoma Virus (HaMuSV), Murine Mammary Gland Tumor virus (MuMTV), gibbon leukemia virus (GaLV), feline leukemia virus (FLV), murine stem cell virus (MSCV) and Rouss sarcoma virus (RSV)) and lentivirus.
  • M-MuLV Moloney Murine Leukemia Virus
  • MoMSV Moloney Murine Sarcoma Virus
  • HaMuSV Harvey Murine Sarcoma Virus
  • MuMTV Murine Mammary Gland Tumor virus
  • GaLV gibbon leukemia virus
  • FLV feline leukemia virus
  • MSCV murine stem cell virus
  • RSV Rouss sarcoma virus
  • lentivirus refers to a group (or genus) containing many retroviruses.
  • exemplary lentiviruses include but are not limited to: HIV (human immunodeficiency virus; including HIV type 1 and HIV type 2); visna-maedivirus (visna-maedivirus, VMV) virus; goat arthritis-encephalitis virus ( CAEV); Equine Infectious Anemia Virus (EIAV); Feline Immunodeficiency Virus (FIV); Bovine Immunodeficiency Virus (BIV); and Simian Immunodeficiency Virus (SIV).
  • HIV human immunodeficiency virus
  • VMV visna-maedivirus
  • CAEV goat arthritis-encephalitis virus
  • EIAV Equine Infectious Anemia Virus
  • FV Feline Immunodeficiency Virus
  • BIV Bovine Immunodeficiency Virus
  • Simian Immunodeficiency Virus SIV.
  • vector is used herein to refer to a nucleic acid molecule capable of transferring or transporting another nucleic acid molecule.
  • the transferred nucleic acid is usually linked to the carrier nucleic acid molecule, for example inserted into the carrier nucleic acid molecule.
  • the vector may include sequences that direct autonomous replication in the cell, or may include sequences sufficient to allow integration into the host cell's DNA.
  • Useful vectors include, for example, plasmids (such as DNA plasmids or RNA plasmids), transposons, cosmids, bacterial artificial chromosomes, and viral vectors.
  • Useful viral vectors include, for example, replication-defective retroviruses and lentiviruses.
  • viral vector is widely used to refer to nucleic acid molecules (such as transfer plasmids) or viral particles that mediate nucleic acid transfer.
  • Nucleic acid molecules include virus-derived ones that generally promote the transfer or integration of nucleic acid molecules into the cell genome.
  • Nucleic acid elements in. Virus particles usually include various viral components, and sometimes host cell components other than nucleic acids.
  • viral vector may refer to a virus or viral particle capable of transferring nucleic acid into a cell, or the transferred nucleic acid itself.
  • Viral vectors and transfer plasmids contain structural and/or functional genetic elements mainly derived from viruses.
  • the term "retroviral vector” refers to a viral vector or plasmid containing structural and functional genetic elements or parts thereof mainly derived from retroviruses.
  • the term "lentivirus” refers to the genus of the Retroviridae family, which can effectively infect acyclic and post-mitotic cells; they can transmit a significant amount of genetic information into the host cell's DNA, so that they are the best gene delivery vector. One of the effective methods.
  • the present invention relates to a method of transfecting cells with an expression vector encoding CAR.
  • the vector contains additional sequences, such as sequences that promote CAR expression, such as promoters, enhancers, poly-A signals, and/or one or more introns.
  • the CAR coding sequence is flanked by a transposon sequence so that a transposase is present to allow the coding sequence to be integrated into the genome of the transfected cell.
  • the genetically transformed cell is further transfected with a transposase that promotes the integration of the CAR coding sequence into the genome of the transfected cell.
  • the transposase is provided as a DNA expression vector.
  • the transposase is provided as expressible RNA or protein, so that the transposase does not undergo long-term expression in the transgenic cells.
  • the transposase is provided as mRNA (e.g., mRNA comprising a cap and a poly-A tail). Any transposase system can be used according to embodiments of the present invention.
  • the transposase is a salmon-type Tel-like transposase (SB).
  • the transposase is an engineered enzyme with increased enzyme activity.
  • Some specific examples of transposase include, but are not limited to, SB 10, SB 11, or SB 100X transposase (see, for example, Mates et al., 2009, Nat Genet. 41(6): 753-61 or US9228180, which is incorporated by reference Incorporated into this article).
  • the method may include electroporating cells with mRNA encoding SB 10, SB 11, or SB 100X transposase.
  • the claimed nucleic acid, protein, antibody, antibody fragment and/or CAR sequence variants are also included within the scope of the present invention, which maintain similar binding properties of the present invention. These variants display alternative sequences, but retain substantially the same binding properties such as target specificity, because the specific sequences provided are known to be functional analogs or functional analogs. Sequence identity relates to the percentage of identical nucleotides or amino acids when the sequence is aligned.
  • sequence identity refers to the degree of nucleotide-nucleotide or amino acid-amino acid based sequence identity in the comparison window. Therefore, the “percentage of sequence identity” can be calculated by the following: compare the two best aligned sequences on the comparison window, and determine the presence of the same nucleic acid base (such as A, T, C, G, I) on the two sequences Or the position of the same amino acid residue (e.g., Ala, Pro, Ser, Thr, Gly, Val, Leu, He, Phe, Tyr, Trp, Lys, Arg, His, Asp, Glu, Asn, Gln, Cys and Met) To generate the number of matching positions, divide the number of matching positions by the total number of positions in the comparison window (ie, the window size), and multiply the result by 100 to get the percentage of sequence identity.
  • the same nucleic acid base such as A, T, C, G, I
  • amino acid residue e.g., Ala, Pro, Ser, Thr
  • nucleotides or polypeptides it includes at least about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98 %, 99% or 100% sequence identity of nucleotides or polypeptides, usually wherein the polypeptide variant retains at least one biological activity of the reference polypeptide.
  • nucleotide sequences encoding polypeptides or proteins as described herein. Some of these polynucleotides have minimal homology or sequence identity with the nucleotide sequence of any natural gene. Nevertheless, the present invention specifically considers polynucleotides that vary due to differences in codon usage. Deletions, substitutions and other changes in the sequence that fall into the sequence identity are also included in the present invention.
  • a substitution as defined herein is a modification of the amino acid sequence of a protein, whereby one or more amino acids are replaced by the same number of (different) amino acids, resulting in a protein containing an amino acid sequence different from that of the primary protein. Substitutions can be made, which preferably do not significantly change the function of the protein. Like addition, replacement can be natural or artificial. It is well known in the art that amino acid substitutions can be made without significantly changing the function of the protein. This is especially true when the modification involves a "conservative" amino acid substitution that replaces one amino acid with another amino acid of similar properties.
  • Such “conservative" amino acids can be natural or synthetic amino acids, which can be replaced due to size, charge, polarity, and conformation, but do not significantly affect the structure and function of the protein. Generally, many amino acids can be replaced by conservative amino acids without adversely affecting the function of the protein.
  • non-polar amino acids Gly, Ala, Val, Ile and Leu
  • non-polar aromatic amino acids Phe, Trp and Tyr
  • neutral polar amino acids Ser, Thr, Cys, Gln, Asn and Met
  • positively charged The amino acids Lys, Arg and His
  • the negatively charged amino acids Asp and Glu represent the conservative amino acid group.
  • Ala, Gly, Ser, and sometimes Cys can be substituted for each other, even if they belong to different groups.
  • Substitution variants remove at least one amino acid residue in the antibody molecule and insert a different residue in its position.
  • the most interesting locations include the hypervariable region, but the FR changes are also considered. If such a substitution results in a change in biological activity, then a larger number of changes can be introduced and the product screened.
  • the present invention considers cells genetically modified to express the CAR of the present invention for the treatment of B cell related disorders.
  • the term “genetically engineered” or “genetically modified” refers to the addition of additional genetic material in the form of DNA or RNA to the total genetic material in a cell.
  • the terms “genetically modified cell”, “modified cell” and “redirected cell” are used interchangeably.
  • the term “gene therapy” refers to the introduction of additional genetic material in the form of DNA or RNA into the total genetic material in a cell, which restores, corrects or modifies gene expression, or is used to express therapeutic polypeptides (such as CAR Or ADC).
  • the CAR of the present invention is introduced into immune effector cells and expressed in immune effector cells in order to redirect their specificity for the target antigen of interest, such as the BCMA polypeptide.
  • Immunocell or “immune effector cell” is any cell of the immune system that has one or more effector functions (for example, cytotoxic cell killing activity, cytokine secretion, ADCC and/or CDC induction).
  • effector functions for example, cytotoxic cell killing activity, cytokine secretion, ADCC and/or CDC induction.
  • the immune effector cells of the present invention may be autologous or non-autologous ("non-self", such as allogeneic, syngeneic or allogeneic).
  • autologous refers to cells from the same subject, which is a preferred embodiment of the present invention.
  • allogeneic refers to cells of the same species as the subject or patient but genetically different.
  • seyngeneic refers to cells that are genetically identical but come from different subjects.
  • allogeneic refers to cells from different species. In a preferred embodiment, the cells of the invention are autologous or allogeneic.
  • Exemplary immune effector cells used with the CAR of the present invention include T lymphocytes.
  • T cell or "T lymphocyte” is recognized in the art and is intended to include thymocytes, immature T lymphocytes, mature T lymphocytes, resting T lymphocytes, cytokine-induced killer cells (CIK cells) Or activated T lymphocytes.
  • Cytokine-induced killer (CIK) cells are usually CD3- and CD56-positive non-major histocompatibility complex (MHC), which are restricted natural killer (NK)-like T lymphocytes.
  • the T cell may be a T helper cell (Th), such as T helper cell 1 (Th1) or T helper cell 2 (Th2).
  • the T cell may be a helper T cell or a cytotoxic T cell or any other T cell subpopulation.
  • Other exemplary T cell populations suitable for particular embodiments include naive T cells and memory T cells.
  • T cells modified with the CAR of the present invention described herein can recognize and kill tumor cells.
  • CIK cells may have enhanced cytotoxic activity, so they represent a preferred embodiment of the immune cells of the present invention.
  • immune effector cells can also be used as immune effector cells with the CAR described herein.
  • immune effector cells also include NK cells, NKT cells, neutrophils and macrophages.
  • Immune effector cells also include effector cell progenitor cells, where such progenitor cells can be induced to differentiate into immune effector cells in vivo or in vitro.
  • the present invention provides a method for preparing immune effector cells expressing the CAR of the present invention.
  • the method includes transfection or transduction of immune effector cells isolated from the individual so that the immune effector cells express one or more CARs as described herein.
  • immune effector cells are isolated from the individual and genetically modified without further manipulation in vitro. These cells can then be re-administered directly to the individual.
  • the immune effector cells are first activated and stimulated to proliferate in vitro, and then genetically modified to express CAR.
  • immune effector cells can be cultured before and/or after genetic modification (ie, transduction or transfection to express the CAR of the invention).
  • a source of cells is obtained from the subject.
  • the CAR-modified immune effector cells comprise T cells.
  • T cells can be obtained from many sources, including but not limited to peripheral blood mononuclear cells, bone marrow, lymph node tissue, cord blood, thymus tissue, tissue from the site of infection, ascites, pleural effusion, spleen tissue, and tumors.
  • T cells can be obtained from blood units collected from a subject using any technique or combination of techniques known to those skilled in the art, for example, by sedimentation and antibody-conjugated bead-based methods.
  • cells from the circulating blood of an individual are obtained by a blood aspiration technique.
  • Blood components usually contain lymphocytes, including T cells, monocytes, granulocytes, B cells, other nucleated white blood cells, red blood cells, and platelets.
  • the cells collected by blood aspiration collection can be washed to remove the plasma fraction and placed in a suitable buffer or medium for subsequent processing. The cells can be washed with PBS or another suitable solution that does not contain calcium, magnesium and most divalent cations.
  • the washing step can be performed by methods known to those skilled in the art, for example, by using a semi-automatic flow-through centrifuge (such as Cobe2991 cell processor, Baxter CytoMate, etc.).
  • a semi-automatic flow-through centrifuge such as Cobe2991 cell processor, Baxter CytoMate, etc.
  • the cells can be resuspended in various biocompatible buffers or other saline solutions with or without buffers.
  • undesired components of the blood sample can be removed from the cells directly resuspended in the culture medium.
  • T cells are separated from peripheral blood mononuclear cells (PBMC) by lysing red blood cells and depleting monocytes (eg, by PERCOLLTM gradient centrifugation). Specific T cell subpopulations can be further separated by positive or negative selection techniques.
  • One method that can be used is cell sorting and/or selection by negative magnetic immunoadhesion or flow cytometry using a mixture of monoclonal antibodies directed against the cell surface present on the negatively selected cells. landmark.
  • the method of the present invention can be used to directly genetically modify PBMC to express CAR.
  • T lymphocytes are further separated, and in some embodiments, cytotoxic and helper T lymphocytes can be sorted as initial, cytotoxic and helper T lymphocytes before or after genetic modification and/or amplification.
  • CD8+ cells can be obtained by using standard methods.
  • CD8+ cells are further sorted into naive, central memory, and effector cells by identifying cell surface antigens associated with each of these types of CD8+ cells.
  • Immune effector cells can be genetically modified after isolation using known methods, or immune effector cells can be activated and expanded in vitro (or differentiated in the case of progenitor cells) before genetic modification.
  • immune effector cells such as T cells
  • are genetically modified with the chimeric antigen receptor of the present invention for example, transduced with a viral vector containing a nucleic acid encoding a CAR, and then activated and amplified in vitro .
  • the methods described in U.S. Patent Nos. 5,858,358; 6,905,681; 7,067,318; 7,232,566; 5,883,223; T cells are activated and expanded before or after expression of CAR.
  • a mixture of one, two, three, four, five or more different expression vectors can be used to genetically modify the donor population of immune effector cells, wherein each vector Encoding different chimeric antigen receptor proteins of the present invention (e.g., CAR variant sequence).
  • the resulting modified immune effector cells form a mixed population of modified cells, some of which express more than one different CAR protein.
  • the present invention provides a method for storing immune effector cells expressing genetically modified mouse, human, or humanized CAR protein targeting BCMA protein, which includes cryopreserving the immune effector cells so that the cells are in Stay alive when thawed.
  • a part of the immune effector cells expressing CAR protein can be cryopreserved by methods known in the art to provide a permanent source of such cells for future treatment of patients with B-cell-related disorders. When needed, cryopreserved transformed immune effector cells can be thawed, grown and expanded to obtain more such cells.
  • compositions may comprise one or more polypeptides, polynucleotides, vectors comprising the polynucleotides, genetically modified immune effector cells, etc. as considered herein.
  • Compositions include, but are not limited to, pharmaceutical compositions.
  • “Pharmaceutical composition” refers to a composition formulated in a pharmaceutically acceptable or physiologically acceptable solution, which is administered to cells or animals alone or in combination with one or more other treatment modalities. It should also be understood that, if desired, the composition of the present invention can also be administered in combination with other agents, such as cytokines, growth factors, hormones, small molecules, chemotherapeutic agents, prodrugs, drugs, antibodies or other various pharmaceutically active agents. There are virtually no restrictions on the other components that may also be included in the composition, provided that the additional components do not adversely affect the ability of the composition to deliver the intended therapy.
  • pharmaceutically acceptable is used herein to refer to being suitable for use in contact with human and animal tissues within the scope of reasonable medical judgment without excessive toxicity, irritation, allergic reactions or other problems or complications and with reasonable Those compounds, materials, compositions and/or dosage forms that have a commensurate benefit/risk ratio.
  • pharmaceutically acceptable carriers include but are not limited to any adjuvants and carriers that have been approved by the US Food and Drug Administration or China Food and Drug Administration for use in humans or livestock , Excipients, glidants, sweeteners, diluents, preservatives, dyes/colorants, flavor enhancers, surfactants, wetting agents, dispersants, suspending agents, stabilizers, isotonic agents, solvents , Surfactant or emulsifier.
  • Exemplary pharmaceutically acceptable carriers include, but are not limited to, sugars, such as lactose, glucose, and sucrose; starches, such as corn starch and potato starch; cellulose and derivatives thereof, such as sodium carboxymethyl cellulose, ethyl cellulose And cellulose acetate; tragacanth; malt; gelatin; talc; cocoa butter, wax, animal and vegetable fats, paraffin, silicone, bentonite, silicic acid, zinc oxide; oils, such as peanut oil, cottonseed oil, safflower oil, sesame oil, Olive oil, corn oil, and soybean oil; glycols, such as propylene glycol; polyols, such as glycerol, sorbitol, mannitol, and polyethylene glycol; esters, such as ethyl oleate and ethyl laurate; agar; buffers, For example, magnesium hydroxide and aluminum hydroxide; alginic acid; pyrogen-free water; is
  • the composition of the present invention contains a certain amount of the immune effector cells expressing the CAR of the present invention.
  • the term “amount” refers to an "effective amount” of genetically modified therapeutic cells (eg, T cells) that achieve beneficial or desired preventive or therapeutic results (including clinical results).
  • prophylactically effective amount refers to the amount of genetically modified therapeutic cells effective to achieve the desired preventive result. Usually, but not necessary, because the preventive dose is used in the subject before or in the early stage of the disease, the preventive effective amount is less than the therapeutically effective amount.
  • prevention does not necessarily mean the complete prohibition or prevention of specific medical conditions. The term prevention also refers to reducing the risk of a certain medical condition or worsening symptoms.
  • the "therapeutically effective amount" of genetically modified therapeutic cells can vary depending on various factors such as disease state, age, sex, and individual body weight, as well as the ability of stem and progenitor cells to elicit a desired response in the individual.
  • a therapeutically effective amount is also an amount in which the therapeutically beneficial effect exceeds any toxic or detrimental effects of the virus or transduced therapeutic cells.
  • the term "therapeutically effective amount” includes an amount effective to "treat" a subject (eg, a patient). When the therapeutic amount is indicated, the doctor can determine the precise amount of the composition of the present invention to be administered in consideration of individual differences in age, weight, tumor size, degree of infection or metastasis, and patient (subject) condition.
  • a pharmaceutical composition comprising the T cells described herein may be 10 2 to 10 10 cells / kg body weight, dose is preferably 105 to 106 cells / kg body weight (including all those within the scope of Integer value) to apply.
  • the number of cells will depend on the end use of the composition and the type of cells contained therein.
  • the cells are generally 1 L or less in volume, and can be 500 mL or less, or even 250 mL or 100 mL or less.
  • the desired cell density is typically greater than 10 6 cells / ml, usually greater than 10 7 cells / ml, usually 108 cells / ml or more.
  • the clinically relevant number of immune cells can be allocated to multiple infusions, and the multiple infusions accumulate equal to or exceed 10 5 , 10 6 , 10 7 , 10 8 , 10 9 , 10 10 , 10 11 or 10 12 cells.
  • a lower number of cells can be administered.
  • the CAR-expressing cell composition can be administered multiple times at doses within these ranges.
  • the cells can be allogeneic, syngeneic, allogeneic, or autologous.
  • a composition comprising cells activated and expanded as described herein can be used to treat and prevent diseases that occur in immunocompromised individuals.
  • the composition comprising the CAR-modified T cell of the present invention is used to treat B cell malignancies.
  • the CAR-modified T cells of the present invention can be administered alone or as a pharmaceutical composition in combination with carriers, diluents, excipients, and/or other components (such as IL-2) or other cytokines or cell populations.
  • the pharmaceutical composition of the present invention contains a certain amount of genetically modified T cells, and one or more pharmaceutically or physiologically acceptable carriers, diluents or excipients.
  • the pharmaceutical composition of the present invention comprising a population of immune effector cells (such as T cells) expressing CAR may include: buffer, such as neutral buffered saline, phosphate buffered saline, etc.; carbohydrates, such as glucose, mannose, sucrose or dextran Sugar, mannitol; protein; polypeptides or amino acids (for example, glycine); antioxidants; chelating agents (for example, EDTA) or glutathione; adjuvants, such as aluminum hydroxide; and preservatives.
  • the composition of the invention is preferably formulated for parenteral administration, such as intravascular (intravenous or intraarterial), intraperitoneal or intramuscular administration.
  • the liquid pharmaceutical composition may include one or more of the following: sterile diluent (for example, water for injection), saline solution (preferably normal saline, Ringer's solution, isotonic Sodium chloride), fixed oils (such as synthetic monoglycerides or diglycerides that can be used as solvents or suspension media), polyethylene glycol, glycerin, propylene glycol or other solvents; antibacterial agents, such as benzyl alcohol or p-hydroxybenzoic acid Methyl ester; antioxidants, such as ascorbic acid or sodium bisulfite; chelating agents, such as ethylenediaminetetraacetic acid; and buffers, such as acetate, citrate, or phosphate, and agents that regulate osmotic pressure, such as chlorination Sodium or glucose.
  • the parenteral preparation can be enclosed in ampoules, disposable syringes or multiple dose vials made of glass or plastic.
  • the injectable pharmaceutical for example, water for injection
  • the composition of the present invention contains an effective amount of immune effector cells expressing CAR alone, or in combination with one or more therapeutic agents. Therefore, the CAR-expressing immune effector cell composition can be administered alone or in combination with other known cancer treatments such as radiotherapy, chemotherapy, transplantation, immunotherapy, hormone therapy, photodynamic therapy Wait. The composition can also be administered in combination with antibiotics.
  • therapeutic agents are accepted in the art as standard treatments for specific disease states (e.g., specific cancers) as described herein.
  • Exemplary therapeutic agents contemplated include cytokines, growth factors, steroids, NSAIDs, DMARDs, anti-inflammatory agents, chemotherapeutic agents, radiotherapeutics, therapeutic antibodies or other active and auxiliary agents.
  • the genetically modified immune effector cells of the present invention provide an improved method of adoptive immunotherapy for the treatment of B cell-related disorders, including but not limited to immunomodulatory disorders and hematological malignancies.
  • composition comprising immune effector cells containing the CAR of the present invention is used to treat disorders related to abnormal B cell activity, also referred to as "medical disorders related to the presence of pathogenic B cells”.
  • compositions comprising CAR-modified T cells of the present invention are used to treat hematological malignancies, including but not limited to B-cell malignancies, such as multiple myeloma (MM), acute myeloid leukemia And non-Hodgkin's lymphoma (NHL).
  • MM multiple myeloma
  • NHS non-Hodgkin's lymphoma
  • the CAR and CAR-T according to the present invention as described herein are provided for the treatment of B cell-mediated or plasma cell-mediated diseases or antibody-mediated diseases selected from the group consisting of Diseases or conditions of: multiple myeloma (MM), chronic lymphocytic leukemia (CLL), nonsecretory multiple myeloma, smoldering multiple myeloma, monoclonal gammopathy of unknown significance (MGUS), isolated Plasmacytoma (bone, extramedullary), lymphoplasmacytic lymphoma (LPL), plasma cell leukemia, primary amyloidosis (AL), heavy chain disease, systemic lupus erythematosus (SLE), POEMS syndrome /Sclerosing myeloma, type I and type II cryoglobulinemia, light chain deposition disease, idiopathic thrombocytopenic purpura (ITP), acute glomerulonephritis, pemphigus and pe
  • MM multiple mye
  • Multiple myeloma is a B-cell malignant tumor of mature plasma cell morphology, which is characterized by tumor transformation of a single clone of these types of cells. These plasma cells proliferate in the BM and may invade adjacent bones, sometimes invading the blood. Variant forms of multiple myeloma include dominant multiple myeloma (overt multiple myeloma), smoldering multiple myeloma, plasma cell leukemia, nonsecretory myeloma, IgD myeloma, osteosclerotic myeloma, solitary plasma Cell tumor and extramedullary plasmacytoma.
  • Non-Hodgkin's lymphoma includes a large group of lymphocytic carcinomas (white blood cells). Non-Hodgkin's lymphoma can occur at any age and is usually marked by larger lymph nodes, fever, and weight loss than normal. Non-Hodgkin's lymphoma can also exist in extranodal sites, such as the central nervous system, mucosal tissues, including lungs, intestines, colons, and internal organs. There are many different types of non-Hodgkin's lymphoma. For example, non-Hodgkin's lymphoma can be divided into aggressive (rapid growth) and indolent (chronic growth) types.
  • non-Hodgkin's lymphoma can be derived from B cells and T cells, as used herein, the terms "non-Hodgkin's lymphoma" and "B-cell non-Hodgkin's lymphoma” are used interchangeably.
  • B-cell non-Hodgkin’s lymphoma includes Burkitt’s lymphoma, chronic lymphocytic leukemia/small lymphocytic lymphoma (CLL/SLL), diffuse large B-cell lymphoma, follicular lymphoma, immunogen Cellular large cell lymphoma, precursor B lymphoblastic lymphoma, and mantle cell lymphoma. Lymphoma that occurs after bone marrow or stem cell transplantation is usually B-cell non-Hodgkin's lymphoma.
  • subjects include those exhibiting symptoms of diseases, disorders, or conditions of the hematopoietic system (such as B cell malignancies) that can be treated with gene therapy vectors, cell-based therapeutics and methods disclosed elsewhere herein Any animal.
  • Typical subjects include laboratory animals (e.g., mice, rats, rabbits, or guinea pigs), farm animals, and domestic animals or pets (e.g., cats or dogs).
  • Typical non-human primates preferably including human patients.
  • Typical subjects include human patients who have B-cell malignancies, have been diagnosed with B-cell malignancies, or are at risk of having B-cell malignancies.
  • treatment includes any beneficial or desired effect on the symptoms or pathology of the disease or pathological condition, and may include even minimal reduction of one or more measurable markers of the disease or condition being treated .
  • the treatment may optionally involve the reduction or improvement of the symptoms of the disease or disorder, or the delay in the progression of the disease or disorder.
  • Treatment does not necessarily mean the complete eradication or cure of a disease or condition or its related symptoms.
  • prevention means a method of preventing, inhibiting, or reducing the likelihood of occurrence or recurrence of a disease or condition. It also refers to delaying the onset or recurrence of a disease or condition, or delaying the onset or recurrence of symptoms of a disease or condition. As used herein, “prevent” and similar words also include reducing the intensity, impact, symptoms, and/or burden of the disease or condition before the onset or recurrence of the disease or condition.
  • a method of treating a B cell-related disorder in a subject in need thereof includes administering an effective amount, for example, a therapeutically effective amount, of a composition comprising the genetically modified immune effector cells of the present invention.
  • an effective amount for example, a therapeutically effective amount, of a composition comprising the genetically modified immune effector cells of the present invention.
  • the number and frequency of administration will be determined by factors such as the patient's condition and the type and severity of the patient's disease, although the appropriate dosage can be determined through clinical trials.
  • composition of the present invention can be carried out in any convenient way, including by aerosol inhalation, injection, ingestion, blood transfusion, implantation or transplantation.
  • the composition is administered parenterally.
  • parenteral administration refers to administration methods other than enteral and topical administration, usually by injection, including but not limited to intravascular, intravenous, intramuscular, intraarterial, intrathecal, intrasaccular, or orbital , Intratumoral, intracardiac, intradermal, intraperitoneal, transtracheal, subcutaneous, subcutaneous, intraarticular, subcapsular, subarachnoid, intraspine and intrasternal injections and infusions.
  • the composition of the present invention is administered to the subject by direct injection into the tumor, lymph node, or infection site.
  • BCMA CAR-T means CAR-T cells that can express BCMA specific binding domain
  • CD8 TM means transmembrane domain.
  • T cells including CAR-NK
  • the present invention provides a more detailed description of T cells (including CAR-T cells), but in general, these descriptions of T cells are also applicable to NK cells.
  • T cell or its synonyms in the description of T cells is replaced with "NK cell” or its synonyms. This is very necessary from the perspective of narrative conciseness. If it is judged that the replacement is inappropriate in some cases according to the prior art, the replacement is not performed.
  • Figure 1 The test results of the affinity between the Lead 1 VHH-FC fusion protein (anti-BCMA antibody, VHH-IgG1Fc) and the human BCMA antigen recombinant protein using the ELISA method.
  • Figure 2 shows the results of the detection of the affinity between the Lead 1 VHH-FC fusion protein and the BCMA overexpression cell line RPMI8226 using flow cytometry.
  • Fig. 3 is a schematic structural diagram of CAR in the BCMA-CART structure provided by an embodiment of the present invention, in which the CD8a hinge-transmembrane (TM) domain and the 4-1BB co-stimulatory domain are fused with the CD3 ⁇ signaling region.
  • TM hinge-transmembrane
  • Figure 5 shows that the CAR-T of the present invention has a significant inhibitory effect on multiple myeloma cell lines.
  • Figure 6 shows that the CAR-T of the present invention has a specific inhibitory effect on multiple myeloma.
  • Figure 7 shows the in vitro killing effect of BCMA-PE24 recombinant immunotoxins (RITs) on multiple myeloma cell lines.
  • Example 1 Alpaca (Alpaca) immunization and antiserum titer detection
  • First immunization Use 0.5 mg of antigen and Freund's complete adjuvant to mix 1:1, emulsify and inject, with a volume of 1 ml per alpaca;
  • Second immunization 3 weeks after the first immunization, use 0.25 mg of antigen Mix with Freund's incomplete adjuvant 1:1, emulsify and inject, with an injection volume of 1ml per alpaca;
  • Third immunization 3 weeks after the second immunization, use 0.25mg antigen and Freund's incomplete adjuvant Mix 1:1, emulsify and inject, with injection volume of 1ml per alpaca;
  • Fourth immunization 3 weeks after three immunizations, mix 1:1 with 0.25mg antigen and Freund’s incomplete adjuvant, after emulsification Injection, the injection volume is 1ml per alpaca.
  • Serum processing and antiserum titer detection one week after the fourth immunization, 50ml of peripheral blood was collected, and serum and lymphocytes were separated. The antigen was coated in an ELISA 96-well plate, and the antibody titer in the serum was measured by the ELISA method. The titer of antiserum is shown in the table below.
  • Example 2 Construction and screening of phage display immune antibody library.
  • the phage display immune antibody library was further constructed, and a positive monoclonal antibody against human BCMA Nanobody was obtained through biological screening.
  • PBMC lymphocyte PBMC
  • RNA extraction kit to extract total RNA
  • RNA reverse by RT-PCR Transcription kit to obtain cDNA
  • IgG2 and IgG3 heavy chain variable region sequences step by step (Nanobody heavy chain variable region VHH) by nested PCR or obtain IgG1, IgG2 and IgG3 heavy chain variable region sequences (routine The heavy chain variable region VH of antibody IgG1 and the heavy chain variable region VHH of Nanobody IgG2, IgG3).
  • step 4 Add the mixture obtained in step 3 to a centrifuge tube containing 1 mL of NEB5 ⁇ F' bacteria, incubate at 37°C on a shaker for 1 hour; take 20 ⁇ L of the culture solution in the centrifuge tube and dilute it at an appropriate multiple and place it on an LB/Carb 50 culture plate Coat the plate and place it in a 37°C biochemical incubator overnight.
  • helper phage M13K07 final concentration of 10 10 /mL
  • the shaker is 37°C , Incubate for 1 hour; transfer the above-mentioned culture medium to 35mL 2YT/Carb 50 /Kan 25 culture medium, place in a shaker, and incubate at 37°C overnight, and collect phage to form an antibody library for each round.
  • the monoclonal corresponding to the antigen well OD value> 0.5 (including overflow wells) and the negative control well OD value ⁇ 0.2 are identified as positive clones with higher affinity, and the monoclonal DNA sequencing is performed; the corresponding sequences are shown in the table below.
  • the monoclonal corresponding to the antigen well OD value> 0.5 (including overflow wells) and the negative control well OD value ⁇ 0.2 are identified as positive clones with higher affinity, and the monoclonal DNA sequencing is performed; the corresponding sequences are shown in the table below (CDR regions)
  • CDR regions The definition of using the North method, Lead1-Lead3 are marked with italics and/or underline; the CDRs of Lead4-Lead19 are shown in Table 1).
  • Example 5 Eukaryotic expression of BCMA (VHH-Fc fusion protein) and affinity identification.
  • Eukaryotic expression was performed on the selected Lead 1 sequence, and its affinity with antigen recombinant protein and antigen overexpression cell line was studied.
  • VHH fragment of Lead 1 by PCR, insert the fragment into a partial fragment of human IgG1 (hinge+CH2+CH3, and the amino acid sequence of the fusion protein after fusion with VHH, such as SEQ ID) using homologous recombination or restriction enzyme ligation.
  • the nucleotide sequence is as described in SEQ ID NO: 3) in the eukaryotic expression vector pFcIG; electrotransformed into E.
  • BCMA is an important target for the treatment of multiple myeloma (MM).
  • CAR-T cells were constructed using BCMA Lead 1 VHH sequence to study the killing effect of BCMA Lead 1 VHH CAR-T on multiple myeloma (MM) cells .
  • lentiviral vectors 1) Gene synthesis BCMA lead 1VHH-CD8TM-4-1BB-CD3 ⁇ fusion gene sequence (its amino acid sequence is shown in SEQ ID NO: 6, and the DNA sequence is shown in SEQ ID NO: 5. The schematic diagram of its structure is shown in Figure 3); 2) Use homologous recombination or restriction enzyme digestion to insert the fragment into the PWPXLD-kana vector; transform the recombinant vector into E.
  • coli strain Stbl3, screen by kanamycin, and sequence the monoclonal Obtain the correct recombinant plasmid; then expand the culture of the host bacteria containing the recombinant plasmid, and use the endotoxin-removing kit to obtain a sterile endotoxin-free plasmid, that is, the PWPXLD plasmid vector containing the CAR gene fragment; 3) At the same time, the lentivirus packaging auxiliary plasmid psPax2 And PMD2.0G were transformed into DH5 ⁇ , ampicillin screened, and plasmids were extracted.
  • the CAR expressing lentivirus prepared (Lenti-CAR): 1) 3x10 6 293T cells were seeded in petri dishes; 2) after 24 hours, the viral plasmid (CAR-PWPXLD: 9 ⁇ g, psPax2 : 9 ⁇ g, and PMD2.
  • LDH experiment detects the killing effect of CAR-T on RPMI 8226 cells in vitro: 1) Configure RPMI 8226 cells with high BCMA expression or K562 and Raji cells with low BCMA expression to 2 ⁇ 10 5 /mL, Day5 CAR-T The cell configuration is 4 ⁇ 10 5 /mL; set the following groups: blank group (200 ⁇ L medium), spontaneous group A (100 ⁇ L CAR T cells + 100 ⁇ L medium), spontaneous group B (100 ⁇ L target cells + 100 ⁇ L medium), Experimental group (100 ⁇ L CAR T cells+100 ⁇ L target cells); another set 200 ⁇ L medium as the volume correction group, target cells 100 ⁇ L+100 ⁇ L medium as the maximum release group; placed in a 96-well U-shaped plate and cultured at 37°C Incubate with 5% CO 2 for 24 hours; 2) On the second day, add 20 microliters of LDH maximum release reagent to each well in the maximum release group and volume correction group, place in a 37°C incubator, and incubat
  • the CAR-T of the present invention can treat medulla Leukemia has a significant curative effect or inhibitory effect, and has no significant curative effect or inhibitory effect on tumor cells with low BCMA expression (K562 and Raji).
  • mice Animal experiments to detect the killing effect of CAR-T on RPMI 8226 cells in vivo: Purchase 4-6 weeks old B-NDG severe immunodeficiency mice, adapt to the breeding environment for one week and inoculate 2 ⁇ 10 6 subcutaneously on the forelimb flanks. RPMI 8226 multiple myeloma tumor cells. Observe and measure the tumor size. After 3-4 weeks, when the tumor grows to 80-100 mm 3 , the mice are randomly divided into 6 groups, and CAR-T cells cultured in vitro for 7-8 days are injected into the tail vein for two consecutive days. The dose of each dose was 2 ⁇ 10 6 /head.
  • Example 7 In vitro killing effect of BCMA-PE24 recombinant immunotoxins (RITs) on RPMI 8226 cells
  • Recombinant immunotoxins are targeted biopharmaceuticals formed by linking highly specific monoclonal antibodies with biotoxin molecules with powerful killing effects.
  • Pseudomonas extoxin PE
  • PE24 is one of the commonly used biological toxins, among which PE24 only retains the third domain (Domain III) of PE toxin, so it greatly retains the toxicity of PE while reducing the drug Immunogenicity.
  • Previous studies have shown that scFv-PE24RITs prepared using BCMA single-domain antibodies linked to PE24 have strong killing ability on multiple myeloma cells (see: https://academic.oup.com/abt/article/1/1/ 19/5076366 ).
  • the Lead 1 VHH sequence obtained by screening was fused and expressed with PE24 to study the in vitro killing effect of the recombinant immunotoxin on RPMI8226 cells.

Abstract

Provided is an antibody that specifically binds to the B-cell maturation antigen (BCMA) and a use thereof. The present invention relates to an antibody or an active fragment thereof which can specifically bind to the BCMA, and a fusion protein which comprises the antibody or the active fragment thereof. The fusion protein may comprise the antibody or the active fragment thereof, a transmembrane domain and a costimulatory signal transduction region, the antibody or the active fragment thereof can specifically bind to a tumor-specific antigen BCMA, and T cells are activated by means of the transmembrane domain and the costimulatory signal transduction region. Also provided is a CAR-T cell capable of expressing the described fusion protein, the CAR-T cell uses the BCMA as a target antigen and is used to specifically kill tumor cells, such as multiple myeloma or acute myeloid leukemia. CAR-T cells can be used as a therapeutic drug for oncological diseases, thus providing a new method for tumor prevention and treatment.

Description

特异性结合B细胞成熟抗原的抗体及其用途Antibody that specifically binds B cell mature antigen and its use 技术领域Technical field
本发明涉及生物医药领域,具体涉及特异性结合B细胞成熟抗原的抗体及其制备和应用。The invention relates to the field of biomedicine, in particular to an antibody that specifically binds to a mature antigen of B cells, and its preparation and application.
背景技术Background technique
T细胞是淋巴细胞的一种,在细胞介导的免疫性中起重要作用。其与其他淋巴细胞(诸如B细胞及自然杀手细胞(NK细胞))的区别在于细胞表面上存在T细胞受体(TCR)。T辅助细胞,亦称为CD4 +T或CD4T细胞,在其表面上表达CD4糖蛋白。辅助T细胞在暴露于由MHC(主要组织相容复合体)II类分子呈递之肽抗原时活化。一旦活化,此类细胞快速增殖且分泌可调节免疫反应的细胞因子。细胞毒性T细胞,亦称为CD8 +T细胞或CD8T细胞,在细胞表面上表达CD8糖蛋白。CD8 +T细胞在暴露于由MHC I类分子呈递的肽抗原时活化。记忆T细胞是一T细胞亚群,长期存在且响应于相关抗原,因此向免疫系统提供针对过去感染和/或肿瘤细胞的记忆。 T cells are a type of lymphocytes and play an important role in cell-mediated immunity. It differs from other lymphocytes (such as B cells and natural killer cells (NK cells)) in the presence of T cell receptors (TCR) on the cell surface. T helper cells, also known as CD4 + T or CD4 T cells, express CD4 glycoprotein on their surface. Helper T cells are activated when exposed to peptide antigens presented by MHC (major histocompatibility complex) class II molecules. Once activated, such cells proliferate rapidly and secrete cytokines that can regulate immune responses. Cytotoxic T cells, also known as CD8 + T cells or CD8 T cells, express CD8 glycoprotein on the cell surface. CD8 + T cells are activated when exposed to peptide antigens presented by MHC class I molecules. Memory T cells are a subset of T cells that exist for a long time and respond to related antigens, thus providing the immune system with memories of past infections and/or tumor cells.
嵌合抗原受体(chimeric antigen receptor,缩写CAR)修饰的T细胞即为CAR-T,是在体外培养条件下使用遗传工程手段修饰T细胞,使其表达外源性抗肿瘤的基因。CAR基因为人工设计的基因片段,其编码蛋白主要包括细胞外识别域和细胞内信号转导结构域:前者为特异性抗体片段,用于靶向识别肿瘤表面特异性分子;后者用于启动特异性识别后的免疫细胞应答,发挥细胞免疫作用。经基因改造后,T细胞可在其表面产生嵌合抗原受体。CAR为允许T细胞识别肿瘤细胞上的特定蛋白(抗原)的蛋白。经基因工程改造的CAR T细胞能实验室中生长直至其数目达到数十亿。然后可将扩增的CART细胞输注至患者中。T cells modified by chimeric antigen receptor (CAR) are called CAR-T, which are modified by genetic engineering methods under in vitro culture conditions to express exogenous anti-tumor genes. The CAR gene is an artificially designed gene fragment. Its encoded protein mainly includes an extracellular recognition domain and an intracellular signal transduction domain: the former is a specific antibody fragment used to target and recognize specific molecules on the tumor surface; the latter is used to start Immune cell response after specific recognition plays a role in cellular immunity. After genetic modification, T cells can produce chimeric antigen receptors on their surface. CAR is a protein that allows T cells to recognize specific proteins (antigens) on tumor cells. Genetically engineered CAR T cells can grow in the laboratory until their number reaches billions. The expanded CART cells can then be infused into the patient.
B细胞成熟抗原(B Cell Maturation Antigen,BCMA)是由人TNFRSF17基因编码的细胞表面受体,可结合B细胞激活因子(B cell activating  factor,BAFF)和增殖诱导配体(APRIL),在B淋巴细胞分化和自体免疫反应中起到重要作用。因此在部分B淋巴细胞相关的血液瘤中有高度表达,是成药潜力强的优秀靶点,适应症包括但不限于多发性骨髓瘤(multiple myeloma,MM)和急性髓细胞性白血病(Acute myeloid leukemia,AML)等。B Cell Maturation Antigen (BCMA) is a cell surface receptor encoded by the human TNFRSF17 gene, which can bind to B cell activating factor (BAFF) and proliferation-inducing ligand (APRIL). It plays an important role in cell differentiation and autoimmune response. Therefore, it is highly expressed in some blood tumors related to B lymphocytes and is an excellent target with strong potential for drug development. Indications include, but are not limited to, multiple myeloma (MM) and acute myeloid leukemia (Acute myeloid leukemia). , AML) and so on.
目前已经描述了许多抗BCMA CAR构建体。2013年,Carpenter等人公开了一种抗BCMA CAR转导的T细胞方法,这是一项使用体外试验和动物试验(小鼠试验)相结合的临床前研究(Carpenter等人,2013;Clin Cancer Res;19(8);2048-2060)。2015年6月,Bluebird和Celgene启动针对BCMA CAR-T细胞疗法的研究合作。2016年初,宾夕法尼亚大学癌症中心(Abramson Cancer Center)开始使用抗BCMA的CAR T治疗多发性骨髓瘤患者的招募。针对BCMA的CAR或相应的CAR T,例如已经在WO2018/028647、WO2017/211900、WO2016/014789、WO2016/094304、WO2016/014565和WO2013/154760等有所描述。CN109134665A还公开了一种基于单域抗体的BCMA嵌合抗原受体及应用。Many anti-BCMA CAR constructs have been described. In 2013, Carpenter et al. disclosed an anti-BCMA CAR-transduced T cell method, which is a pre-clinical study that uses a combination of in vitro tests and animal tests (mouse tests) (Carpenter et al., 2013; Clin Cancer) Res; 19(8); 2048-2060). In June 2015, Bluebird and Celgene launched a research collaboration for BCMA CAR-T cell therapy. At the beginning of 2016, the Abramson Cancer Center of the University of Pennsylvania (Abramson Cancer Center) began the recruitment of anti-BCMA CAR T to treat patients with multiple myeloma. The CAR or corresponding CAR T for BCMA has been described in WO2018/028647, WO2017/211900, WO2016/014789, WO2016/094304, WO2016/014565 and WO2013/154760, for example. CN109134665A also discloses a single domain antibody-based BCMA chimeric antigen receptor and its application.
尽管许多潜在的替代疗法正在开发中,但仍然需要提供有效的方法来解决与致病性B细胞的存在相关的病症,尤其是多发性骨髓瘤、急性髓细胞性白血病。这主要是因为相关的免疫治疗过程中容易出现脱靶并容易造成再度复发。Although many potential alternative therapies are under development, there is still a need to provide effective methods to solve the conditions associated with the presence of pathogenic B cells, especially multiple myeloma and acute myeloid leukemia. This is mainly because the relevant immunotherapy process is prone to miss the target and easily cause recurrence.
发明内容Summary of the invention
有鉴于此,本发明提供了一种针对BCMA抗体和基于该抗体CAR-T细胞及其制备和应用。该CAR-T细胞能够特异性识别和杀伤肿瘤,具有更高效的肿瘤杀伤活性,例如多发性骨髓瘤(multiple myeloma,MM)和急性髓细胞性白血病(Acute myeloid leukemia,AML)。In view of this, the present invention provides an antibody against BCMA and CAR-T cells based on the antibody, as well as preparation and application thereof. The CAR-T cells can specifically recognize and kill tumors, and have more efficient tumor killing activity, such as multiple myeloma (MM) and acute myeloid leukemia (AML).
具体而言,本发明提供了一种能结合人BCMA多肽的抗BCMA抗体或其抗原结合片段,其能竞争性结合SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一所示的单个重链可变区(VHH)所结合人BCMA表位。示例性地,所述抗BCMA抗体或其抗原结合片段包含如SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一所 示的单个重链可变区(VHH)的重链互补决定区H-CDR1、H-CDR2和H-CDR3或其人源化变体序列,例如,所述H-CDR1、H-CDR2和H-CDR3分别选自SEQ ID NO:10-12中任一项所示出的一种或多种CDR或其同一性序列;SEQ ID NO:16-18中任一项所示出的一种或多种CDR或其同一性序列;或SEQ ID NO:20-22中任一项所示出的一种或多种CDR或其同一性序列。Specifically, the present invention provides an anti-BCMA antibody or antigen-binding fragment thereof that can bind to human BCMA polypeptide, which can competitively bind to SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: one of the human BCMA epitopes bound by a single variable heavy chain (VHH) shown in one of 23-38. Exemplarily, the anti-BCMA antibody or antigen-binding fragment thereof comprises a single weight as shown in one of SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: 23-38 The heavy chain complementarity determining regions of the variable chain region (VHH) H-CDR1, H-CDR2 and H-CDR3 or their humanized variant sequences, for example, the H-CDR1, H-CDR2 and H-CDR3 are selected respectively One or more CDRs shown in any one of SEQ ID NO: 10-12 or their identity sequences; one or more CDRs shown in any one of SEQ ID NO: 16-18 or Its identity sequence; or one or more CDRs or its identity sequence shown in any one of SEQ ID NO: 20-22.
示例性地,本发明所述的抗体或其抗原结合片段,其包含SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19所示的重链可变区序列或其人源化序列或与SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一具有至少80%的序列同一性的氨基酸序列。Exemplarily, the antibody or antigen-binding fragment thereof of the present invention comprises the heavy chain variable region sequence shown in SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19 or its humanized sequence Or an amino acid sequence that has at least 80% sequence identity with one of SEQ ID NO: 2, SEQ ID NO: 15, or SEQ ID NO: 19, or SEQ ID NO: 23-38.
示例性地,SEQ ID NO:10的同一性序列是指与SEQ ID NO:10具有至少80%的序列同一性的重链互补决定区1(H-CDR1,其编码序列示例性地可为SEQ ID NO:7);Exemplarily, the identity sequence of SEQ ID NO: 10 refers to the heavy chain complementarity determining region 1 (H-CDR1) that has at least 80% sequence identity with SEQ ID NO: 10, the coding sequence of which may be exemplarily SEQ ID NO: 10 ID NO: 7);
SEQ ID NO:11的同一性序列是指与SEQ ID NO:11具有至少80%的序列同一性的重链互补决定区2(H-CDR2,其编码序列示例性地可为SEQ ID NO:8);和The identity sequence of SEQ ID NO: 11 refers to the heavy chain complementarity determining region 2 (H-CDR2) that has at least 80% sequence identity with SEQ ID NO: 11, and its coding sequence may be, for example, SEQ ID NO: 8 );with
SEQ ID NO:12的同一性序列是指与SEQ ID NO:12具有至少80%的序列同一性的重链互补决定区3(H-CDR3,其编码序列示例性地可为SEQ ID NO:9)。The identity sequence of SEQ ID NO: 12 refers to the heavy chain complementarity determining region 3 (H-CDR3) that has at least 80% sequence identity with SEQ ID NO: 12, and its coding sequence may be, for example, SEQ ID NO: 9 ).
进一步地,本发明所述的抗体或抗原结合片段可选自如下的组:骆驼Ig、Ig NAR、Fab片段、Fab’片段、F(ab)’ 2片段、F(ab)’ 3片段、Fv、scFv、双-scFv、(scFv) 2、微型抗体、双链抗体、三链抗体、四链抗体、二硫键稳定的Fv蛋白以及单结构域抗体(sdAb,纳米抗体)、双特异性抗体或三特异性抗体等。 Further, the antibody or antigen-binding fragment of the present invention can be selected from the following group: camel Ig, Ig NAR, Fab fragment, Fab' fragment, F(ab)' 2 fragment, F(ab)' 3 fragment, Fv , ScFv, double-scFv, (scFv) 2 , mini-antibodies, diabodies, tri-chain antibodies, four-chain antibodies, disulfide-stabilized Fv proteins and single domain antibodies (sdAbs, Nanobodies), bispecific antibodies Or trispecific antibodies and so on.
本发明还提供了一种融合蛋白,其包含上述的抗体或抗原结合片段。The present invention also provides a fusion protein, which comprises the above-mentioned antibody or antigen-binding fragment.
示例性地,本发明中所述的融合蛋白还可包含标签序列(例如Poly-His、Hemagglutinin、c-Myc、GST、Flag-tag等)或IgG1-Fc蛋白序列,附加表位(如针对人BCMA的其他表位)或附加的抗体活性片段(如针对人BCMA的其他表位或相同表位的抗体或抗体活性片段,或能结合人BCMA的配体),优选地,所述融合蛋白具有SEQ ID NO:4所示的序列。Exemplarily, the fusion protein described in the present invention may also include a tag sequence (such as Poly-His, Hemagglutinin, c-Myc, GST, Flag-tag, etc.) or an IgG1-Fc protein sequence, with additional epitopes (such as for human Other epitopes of BCMA) or additional antibody active fragments (such as antibodies or antibody active fragments directed against other epitopes of human BCMA or the same epitope, or ligands capable of binding to human BCMA), preferably, the fusion protein has SEQ ID NO: The sequence shown in 4.
本发明还提供了一种抗体-药物缀合物,其包含本发明中所述的抗体或抗原结合片段。The present invention also provides an antibody-drug conjugate comprising the antibody or antigen-binding fragment described in the present invention.
示例性地,在本发明所述的抗体-药物缀合物中,所述的药物选自如下:放射性标记物、 32P、 35S、荧光染料、电子致密试剂、酶、生物素、链霉亲和素、洋地黄毒苷、半抗原、免疫原性蛋白质、具有与靶标互补的序列的核酸分子,或任何前述的组合;或免疫调节化合物、抗癌剂、抗病毒剂、抗菌剂、抗真菌剂和抗寄生虫剂,或任何前述的组合。 Exemplarily, in the antibody-drug conjugate of the present invention, the drug is selected from the following: radiolabels, 32 P, 35 S, fluorescent dyes, electron compacting reagents, enzymes, biotin, streptomyces Avidin, digitoxin, hapten, immunogenic protein, nucleic acid molecule having a sequence complementary to the target, or any combination of the foregoing; or immunomodulatory compound, anticancer agent, antiviral agent, antibacterial agent, antibacterial Fungal agents and antiparasitic agents, or any combination of the foregoing.
本发明还提供了一种嵌合抗原受体(CAR),其包含:(1)包含本发明中所述的抗体或抗原结合片段、融合蛋白或抗体-药物缀合物的胞外抗原结合域;并任选地包含(2)跨膜域;和,(3)胞内信号传导域。The present invention also provides a chimeric antigen receptor (CAR), which comprises: (1) an extracellular antigen-binding domain comprising the antibody or antigen-binding fragment, fusion protein or antibody-drug conjugate described in the present invention ; And optionally include (2) a transmembrane domain; and, (3) an intracellular signaling domain.
示例性地,在本发明所述的CAR中,所述跨膜域来源于选自由T细胞受体的α、β或ζ链、CD3ε、CD4、CD5、CD8、CD8α、CD9、CD16、CD22、CD28、CD33、CD37、CD45、CD80、CD86、CD134、CD137、CD152、CD154、ICOS和PD1组成的组中的一种或多种的跨膜结构域。Exemplarily, in the CAR of the present invention, the transmembrane domain is derived from α, β, or ζ chains selected from the group consisting of T cell receptors, CD3ε, CD4, CD5, CD8, CD8α, CD9, CD16, CD22, One or more transmembrane domains in the group consisting of CD28, CD33, CD37, CD45, CD80, CD86, CD134, CD137, CD152, CD154, ICOS and PD1.
示例性地,在本发明所述的CAR中,所述胞内信号转导域包含共刺激信号传导域且选自:CD2、CD3ζ、CD3γ、CD3δ、CD3ε、CD4、CD5、CD7、CD22、CD27、CD28、CD30、CD40、CD66d、CD79a、CD79b、CD83、CD134、CD137、ICOS、CD154、4-1BB和OX40、LFA-1、LIGHT、NKG2C和B7-H3中的一种或多种。Exemplarily, in the CAR of the present invention, the intracellular signal transduction domain includes a costimulatory signal transduction domain and is selected from: CD2, CD3ζ, CD3γ, CD3δ, CD3ε, CD4, CD5, CD7, CD22, CD27 One or more of, CD28, CD30, CD40, CD66d, CD79a, CD79b, CD83, CD134, CD137, ICOS, CD154, 4-1BB and OX40, LFA-1, LIGHT, NKG2C and B7-H3.
另外,在本发明所述的CAR中,还可示例性地包含位于所述胞外抗原结合域的C-末端和所述跨膜域的N-末端之间的铰链域。优选地,所述铰链域来源于CD8α。In addition, the CAR of the present invention may also exemplarily include a hinge domain located between the C-terminus of the extracellular antigen binding domain and the N-terminus of the transmembrane domain. Preferably, the hinge domain is derived from CD8α.
进一步地,在本发明所述的CAR中,其中所述抗体或抗原片段如本发明的抗体-药物缀合物的那样缀合了药物,或者如本发明的融合蛋白那样融合了额外的多肽或蛋白,例如融合了针对人BCMA的另一表位的抗体,如单结构域抗体,或融合了能结合人BCMA的配体。Further, in the CAR of the present invention, the antibody or antigen fragment is conjugated with a drug as in the antibody-drug conjugate of the present invention, or is fused with an additional polypeptide or fusion protein as in the fusion protein of the present invention. The protein, for example, is fused with an antibody against another epitope of human BCMA, such as a single domain antibody, or fused with a ligand capable of binding to human BCMA.
示例性地,本发明的CAR具有SEQ ID NO:6所示的序列或与SEQ ID NO:6具有至少80%的序列同一性的氨基酸序列。Exemplarily, the CAR of the present invention has the sequence shown in SEQ ID NO: 6 or an amino acid sequence having at least 80% sequence identity with SEQ ID NO: 6.
本发明还提供了多核苷酸,其为编码本发明所述的抗体或其抗原结合片段、本发明所述的融合蛋白或本发明所述的CAR的多核苷酸,The present invention also provides a polynucleotide, which is a polynucleotide encoding the antibody or antigen-binding fragment of the present invention, the fusion protein of the present invention, or the CAR of the present invention,
示例性地,所述编码本发明所述的抗体或抗原结合片段的多核苷酸如SEQ ID NO:1所示或其简并序列;Exemplarily, the polynucleotide encoding the antibody or antigen-binding fragment of the present invention is shown in SEQ ID NO: 1 or its degenerate sequence;
所述编码本发明所述的融合蛋白的多核苷酸如SEQ ID NO:3所示或其简并序列;或The polynucleotide encoding the fusion protein of the present invention is shown in SEQ ID NO: 3 or its degenerate sequence; or
所述编码本发明所述的CAR的多核苷酸如SEQ ID NO:5所示或其简并序列。The polynucleotide encoding the CAR of the present invention is shown in SEQ ID NO: 5 or its degenerate sequence.
本发明还提供了一种分离的CAR-T细胞或CAR-NK细胞,其特征在于,所述CAR-T细胞或CAR-NK细胞能够表达本发明所述的抗体或其抗原结合片段;所述CAR-T细胞或CAR-NK细胞能够表达本发明所述的融合蛋白;所述CAR-T细胞或CAR-NK细胞能够表达本发明所述的抗体-药物缀合物;所述CAR-T细胞或CAR-NK细胞能够表达本发明所述的CAR;所述CAR-T细胞或CAR-NK细胞包含本发明所述的多核苷酸。The present invention also provides an isolated CAR-T cell or CAR-NK cell, characterized in that the CAR-T cell or CAR-NK cell can express the antibody or antigen-binding fragment of the present invention; CAR-T cells or CAR-NK cells can express the fusion protein of the present invention; the CAR-T cells or CAR-NK cells can express the antibody-drug conjugate of the present invention; the CAR-T cells Or CAR-NK cells can express the CAR of the present invention; the CAR-T cells or CAR-NK cells contain the polynucleotide of the present invention.
示例性地,本发明的CART细胞为CD4+T细胞或包含CD4+T细胞和CD8+T细胞的细胞混合物。Exemplarily, the CART cells of the present invention are CD4+ T cells or a cell mixture containing CD4+ T cells and CD8+ T cells.
本发明还提供了一种载体,其包含根据本发明所述的多核苷酸。The present invention also provides a vector comprising the polynucleotide according to the present invention.
示例性地,所述载体是表达载体,例如病毒载体,优选为逆转录病毒载体,例如慢病毒载体,优选为选自人免疫缺陷病毒1(HIV-1)、人免疫缺陷病毒2(HIV-2)、维斯纳-梅迪病毒(VMV)病毒、山羊关节炎-脑炎病毒(CAEV)、马传染性贫血病毒(EIAV)、猫免疫缺陷病毒(FIV)、牛免疫缺陷病毒(BIV)和猿猴免疫缺陷病毒(SIV)。Exemplarily, the vector is an expression vector, such as a viral vector, preferably a retroviral vector, such as a lentiviral vector, preferably selected from the group consisting of human immunodeficiency virus 1 (HIV-1), human immunodeficiency virus 2 (HIV- 2) Wisner-Medi virus (VMV) virus, goat arthritis-encephalitis virus (CAEV), equine infectious anemia virus (EIAV), feline immunodeficiency virus (FIV), bovine immunodeficiency virus (BIV) And Simian Immunodeficiency Virus (SIV).
本发明还提供了一种免疫效应细胞,其包含本发明所述的CAR,或包含如本发明所述的多核苷酸或包含本发明所述的载体。The present invention also provides an immune effector cell, which comprises the CAR according to the present invention, or comprises the polynucleotide according to the present invention, or comprises the vector according to the present invention.
示例性地,本发明所述免疫效应细胞为T淋巴细胞或自然杀伤细胞。Exemplarily, the immune effector cells of the present invention are T lymphocytes or natural killer cells.
本发明还提供了一种药物组合物,其包含如本发明所述的CAR-T细胞或CAR-NK细胞,或包含本发明所述的免疫效应细胞,以及任选地,药学上可接受的载体或辅料。The present invention also provides a pharmaceutical composition comprising the CAR-T cell or CAR-NK cell according to the present invention, or the immune effector cell according to the present invention, and optionally, a pharmaceutically acceptable Carrier or auxiliary material.
本发明还提供了一种制备本发明所述的CAR-T细胞或CAR-NK细胞,或制备本发明所述的免疫效应细胞的方法,其包括将本发明所述的载体引入至T淋巴细胞或自然杀伤细胞。The present invention also provides a method for preparing the CAR-T cell or CAR-NK cell of the present invention, or preparing the immune effector cell of the present invention, which comprises introducing the carrier of the present invention into T lymphocytes Or natural killer cells.
示例性地,本发明的CAR-T细胞的制备方法包括如下步骤:Exemplarily, the preparation method of CAR-T cells of the present invention includes the following steps:
(1)合成和扩增(抗体或抗体片段)-CD8αhinge-CD8 TM-4-1BB-CD3ζ融合蛋白基因,将所述(抗体或抗体片段)-CD8αhinge-CD8 TM-4-1BB-CD3ζ 融合蛋白基因克隆到慢病毒表达载体上; (1) Synthesis and amplification (antibody or antibody fragment) -CD8αhinge-CD8 TM -4-1BB-CD3ζ fusion protein gene, and the (antibody or antibody fragment) -CD8αhinge-CD8 TM -4-1BB-CD3ζ fusion protein Gene cloning into lentiviral expression vector;
(2)利用慢病毒包装质粒和步骤(1)得到的慢病毒表达载体质粒感染293T细胞,包装和制备慢病毒;和(2) Use the lentiviral packaging plasmid and the lentiviral expression vector plasmid obtained in step (1) to infect 293T cells, package and prepare the lentivirus; and
(3)利用步骤(2)得到的慢病毒感染T细胞,得到CAR-T细胞。(3) Infect T cells with the lentivirus obtained in step (2) to obtain CAR-T cells.
本发明还提供了如下项目的材料在制备治疗和/或预防癌症的药物中的用途:The present invention also provides the use of materials of the following items in the preparation of medicines for the treatment and/or prevention of cancer:
(a)本发明所述的抗体或其抗原结合片段;(a) The antibody or antigen-binding fragment thereof of the present invention;
(b)本发明所述的融合蛋白;(b) The fusion protein of the present invention;
(c)本发明所述的抗体-药物缀合物;(c) The antibody-drug conjugate of the present invention;
(d)本发明所述的CAR;(d) CAR according to the present invention;
(e)本发明所述的CAR-T细胞或CAR-NK细胞;或(e) The CAR-T cell or CAR-NK cell of the present invention; or
(f)本发明所述的免疫效应细胞。(f) The immune effector cells of the present invention.
示例性地,所述癌症为高表达B细胞成熟抗原的肿瘤及相关疾病,例如多发性骨髓瘤和急性髓细胞性白血病,优选为复发性多发性骨髓瘤。Exemplarily, the cancer is a tumor that highly expresses B-cell mature antigens and related diseases, such as multiple myeloma and acute myeloid leukemia, preferably recurrent multiple myeloma.
本发明还提供了治疗和/或预防癌症的方法,其包括将有效量的(a)本发明所述的抗体或其抗原结合片段、(b)本发明所述的融合蛋白、(c)本发明所述的抗体-药物缀合物、(d)本发明所述的CAR;(e)本发明所述的CAR-T细胞或CAR-NK细胞;或(f)本发明所述的免疫效应细胞施用至受试者。The present invention also provides a method for treating and/or preventing cancer, which comprises combining an effective amount of (a) the antibody or antigen-binding fragment thereof of the present invention, (b) the fusion protein of the present invention, and (c) the present invention. The antibody-drug conjugate of the present invention, (d) the CAR of the present invention; (e) the CAR-T cell or CAR-NK cell of the present invention; or (f) the immune effect of the present invention The cells are administered to the subject.
对于本发明所述的抗体或其抗原结合片段、融合蛋白、CAR等,本发明也考虑了其变体,例如其同一性序列或人源化序列等。示例性地,所述同一性序列是指与原序列或参考序列的同一性约约70%或以上、71%或以上、72%或以上、73%或以上、74%或以上、75%或以上、76%或以上、77%或以上、78%或以上、79%或以上、80%或以上、81%或以上、82%或以上、83%或以上、84%或以上、85%或以上、86%或以上、87%或以上、88%或以上、89%或以上、90%或以上、91%或以上、92%或以上、93%或以上、94%或以上、95%或以上、96%或以上、97%或以上、98%或以上、99%或以上、99.1或以上、99.2或以上、99.3%或以上、99.4%或以上、99.5%或以上、99.6%或以上、99.7%或以上、99.8%或以上、或99.9%或以上。For the antibodies or antigen-binding fragments, fusion proteins, CARs, etc. of the present invention, the present invention also considers their variants, such as their identity sequences or humanized sequences. Exemplarily, the sequence of identity refers to about 70% or more, 71% or more, 72% or more, 73% or more, 74% or more, 75% or more with the original sequence or the reference sequence. Above, 76% or above, 77% or above, 78% or above, 79% or above, 80% or above, 81% or above, 82% or above, 83% or above, 84% or above, 85% or Above, 86% or above, 87% or above, 88% or above, 89% or above, 90% or above, 91% or above, 92% or above, 93% or above, 94% or above, 95% or Above, 96% or above, 97% or above, 98% or above, 99% or above, 99.1 or above, 99.2 or above, 99.3% or above, 99.4% or above, 99.5% or above, 99.6% or above, 99.7% or more, 99.8% or more, or 99.9% or more.
对于本发明的多核苷酸,本发明还考虑了其简并序列或互补序列。示例 性地,所述简并序列与原序列或参考序列的同源性约60%或以上、约70%或以上、71%或以上、72%或以上、73%或以上、74%或以上、75%或以上、76%或以上、77%或以上、78%或以上、79%或以上、80%或以上、81%或以上、82%或以上、83%或以上、84%或以上、85%或以上、86%或以上、87%或以上、88%或以上、89%或以上、90%或以上、91%或以上、92%或以上、93%或以上、94%或以上、95%或以上、96%或以上、97%或以上、98%或以上、99%或以上、99.1或以上、99.2或以上、99.3%或以上、99.4%或以上、99.5%或以上、99.6%或以上、99.7%或以上、99.8%或以上、或99.9%或以上。For the polynucleotide of the present invention, the present invention also considers its degenerate sequence or complementary sequence. Exemplarily, the homology between the degenerate sequence and the original sequence or the reference sequence is about 60% or more, about 70% or more, 71% or more, 72% or more, 73% or more, 74% or more , 75% or more, 76% or more, 77% or more, 78% or more, 79% or more, 80% or more, 81% or more, 82% or more, 83% or more, 84% or more , 85% or above, 86% or above, 87% or above, 88% or above, 89% or above, 90% or above, 91% or above, 92% or above, 93% or above, 94% or above , 95% or above, 96% or above, 97% or above, 98% or above, 99% or above, 99.1 or above, 99.2 or above, 99.3% or above, 99.4% or above, 99.5% or above, 99.6% % Or more, 99.7% or more, 99.8% or more, or 99.9% or more.
本发明提供的CAR能够特异性结合肿瘤特异性抗原B细胞成熟抗原,并通过跨膜结构域和共刺激信号传导区激活该T细胞。该CAR-T细胞能够表达以B细胞成熟抗原为靶抗原的融合蛋白,因此能够特异性地杀伤肿瘤细胞,用于治疗肿瘤类疾病,例如用于B细胞成熟抗原高表达的肿瘤的治疗。The CAR provided by the present invention can specifically bind to the tumor-specific antigen B cell mature antigen, and activate the T cell through the transmembrane domain and the costimulatory signal conduction region. The CAR-T cell can express a fusion protein with a B cell mature antigen as a target antigen, and therefore can specifically kill tumor cells for the treatment of tumor diseases, for example, for the treatment of tumors with high expression of B cell mature antigen.
具体实施方式detailed description
多发性骨髓瘤,也称为浆细胞瘤,是目前难以治愈的B细胞淋巴瘤,其来源自恶性转化的浆细胞克隆,且该疾病通常会复发,并且在多线治疗方案后发生耐药。Multiple myeloma, also known as plasmacytoma, is a B-cell lymphoma that is currently incurable. It is derived from a malignantly transformed plasma cell clone. The disease usually recurs and drug resistance develops after a multi-line treatment regimen.
本发明的针对BMCA的CART或NK细胞可以靶向B细胞成熟抗原(BMCA),进而可以用于治疗与BMCA相关的癌症,例如多发性骨髓瘤或急性髓细胞性白血病,因为BCMA在多发性骨髓瘤肿瘤细胞和急性髓细胞性白血病中高度表达,但不在正常B细胞或前体B细胞中高表达。另外,在直接针对B细胞的抗CD19抗体或抗CD19CAR-T或NK细胞疗法中,由于所针对的癌细胞表面抗原丢失,发生非霍奇金淋巴瘤(B-NHL)耐药性,因此需要新的替代性靶标。对于B-NHL,BCMA可以作为合适的靶标,因此,本发明的高亲和力的抗BCMA CAR-T或NK细胞应当也可以在治疗上用于B-NHL。The CART or NK cells against BMCA of the present invention can target B cell maturation antigen (BMCA), and then can be used to treat BMCA-related cancers, such as multiple myeloma or acute myeloid leukemia, because BCMA is in multiple bone marrow It is highly expressed in tumor cells and acute myeloid leukemia, but not in normal B cells or precursor B cells. In addition, in the anti-CD19 antibody or anti-CD19CAR-T or NK cell therapy directed against B cells, non-Hodgkin’s lymphoma (B-NHL) drug resistance occurs due to the loss of the targeted cancer cell surface antigen, so it is necessary New alternative targets. For B-NHL, BCMA can be used as a suitable target. Therefore, the high-affinity anti-BCMA CAR-T or NK cells of the present invention should also be used therapeutically for B-NHL.
由于本发明的抗BCMA CAR赋予T细胞或NK细胞极高的亲合力,因此其也可以用于识别低表达BCMA的B细胞淋巴瘤。另外,本发明的抗BCMA CAR-T或-NK对正常T细胞、B细胞、NK细胞、内皮细胞、所有骨髓细胞谱系及其前体细胞没有反应性。因此,本发明的抗BCMA CAR-T或-NK对骨髓细胞前体没有不希望的反应性。Since the anti-BCMA CAR of the present invention confers extremely high affinity to T cells or NK cells, it can also be used to identify B-cell lymphomas with low BCMA expression. In addition, the anti-BCMA CAR-T or -NK of the present invention is not reactive to normal T cells, B cells, NK cells, endothelial cells, all bone marrow cell lineages and their precursor cells. Therefore, the anti-BCMA CAR-T or -NK of the present invention has no undesirable reactivity to bone marrow cell precursors.
本发明的CAR的高亲合力使得CAR-T细胞能够a)识别具有高、中和低BCMA表面表达的肿瘤靶细胞,具有低的脱靶反应性,b)针对所述肿瘤靶细胞而被活化,和c)杀伤所述肿瘤靶细胞。因此,本发明的抗BCMA CAR-T可以用于治疗多种淋巴瘤,多发性骨髓瘤肿瘤细胞和急性髓细胞性白血病和B-NHL,例如滤泡性淋巴瘤、弥漫性大B细胞淋巴瘤、套细胞淋巴瘤和慢性淋巴细胞白血病等。The high affinity of the CAR of the present invention enables CAR-T cells to a) recognize tumor target cells with high, medium, and low BCMA surface expression, have low off-target reactivity, and b) be activated against the tumor target cells, And c) killing the tumor target cells. Therefore, the anti-BCMA CAR-T of the present invention can be used to treat a variety of lymphomas, multiple myeloma tumor cells and acute myeloid leukemia and B-NHL, such as follicular lymphoma, diffuse large B-cell lymphoma , Mantle cell lymphoma and chronic lymphocytic leukemia.
在体外共培养系统中,本发明的抗BCMA CAR-T细胞在特异识别RPMI 8226(人多发性骨髓瘤细胞系)上的BCMA抗原后,通过CAR分子的激活结构域激活T细胞的免疫应答,诱导靶细胞RPMI 8226裂解;靶细胞裂解后释放LDH(乳酸脱氢酶,lactate dehydrogenase),通过检测反应体系中的LDH水平,与对照组比较,可以测得CAR-T细胞的实际细胞毒性。In an in vitro co-culture system, the anti-BCMA CAR-T cells of the present invention specifically recognize the BCMA antigen on RPMI 8226 (human multiple myeloma cell line), and activate the T cell immune response through the activation domain of the CAR molecule. Induces the lysis of the target cell RPMI 8226; the target cell releases LDH (lactate dehydrogenase) after lysis. By detecting the LDH level in the reaction system, compared with the control group, the actual cytotoxicity of CAR-T cells can be measured.
通过动物实验证实,本发明的抗BCMA CAR-T细胞能够显著杀死多发性骨髓瘤细胞。Animal experiments have confirmed that the anti-BCMA CAR-T cells of the present invention can significantly kill multiple myeloma cells.
同时,通过实验也正是了含有本发明抗体的融合蛋白BCMA-PE24对RPMI 8226细胞的体外杀伤作用。At the same time, through experiments, it is precisely the in vitro killing effect of the fusion protein BCMA-PE24 containing the antibody of the present invention on RPMI 8226 cells.
嵌合抗原受体:Chimeric antigen receptor:
CAR包含衍生自抗体的细胞外胞外域和包含衍生自T细胞信号传导蛋白的信号传导模块的胞内域。在一种实施方式中,胞外域可以包含来自免疫球蛋白的重链可变区,或包含重链和轻链的可变区,例如被构建为单链可变片段(scFv),优选为仅有重链可变区的单域抗体(sdAb)。sdAb连接到铰链区,该铰链区提供灵活性并通过跨膜结构域将信号转导至胞内信号传导域。跨膜域优选源自CD8α。在第一代CAR中(术语“代”是针对胞内信号传导域结构域而言),胞内信号传导域由TCR复合物的ζ链组成。第二代CAR被设计成含有源自CD28或4-1BB的单一共刺激域。第三代CAR包括两个共刺激域,例如4-1BB-CD3ζ。本发明优选涉及第二代或第三代CAR。The CAR contains an extracellular extracellular domain derived from an antibody and an intracellular domain containing a signaling module derived from a T cell signaling protein. In one embodiment, the extracellular domain may comprise a heavy chain variable region derived from an immunoglobulin, or a variable region comprising a heavy chain and a light chain, for example, is constructed as a single chain variable fragment (scFv), preferably only Single domain antibody (sdAb) with heavy chain variable region. The sdAb is connected to the hinge region, which provides flexibility and transmits signals to the intracellular signaling domain through the transmembrane domain. The transmembrane domain is preferably derived from CD8α. In the first-generation CAR (the term "generation" refers to the intracellular signaling domain), the intracellular signaling domain is composed of the zeta chain of the TCR complex. The second generation CAR is designed to contain a single costimulatory domain derived from CD28 or 4-1BB. The third generation CAR includes two costimulatory domains, such as 4-1BB-CD3ζ. The invention preferably relates to a second or third generation CAR.
本发明提供了将免疫效应细胞的细胞毒性重定向至B细胞的基因工程受体。这些基因工程受体在本文中称为嵌合抗原受体(CAR)。CAR是基于靶向抗原(例如BCMA)的抗体特异性与活化T细胞受体或NK细胞 受体的胞内域组合,具有特异性抗BCMA细胞免疫活性的嵌合蛋白分子。在本文中,术语“嵌合”是指由不同来源的不同蛋白质或DNA组成。The present invention provides genetically engineered receptors that redirect the cytotoxicity of immune effector cells to B cells. These genetically engineered receptors are referred to herein as chimeric antigen receptors (CAR). CAR is a chimeric protein molecule with specific anti-BCMA cell immune activity based on the combination of an antibody targeting an antigen (e.g. BCMA) specifically with the intracellular domain of activated T cell receptor or NK cell receptor. As used herein, the term "chimeric" refers to being composed of different proteins or DNA from different sources.
本发明的CAR包括结合BCMA的胞外域(也称为结合域或抗原结合域)、跨膜域、和胞内域或胞内信号传导域。CAR的抗BCMA抗原结合域与靶细胞表面上的BCMA的结合导致CAR的聚集并向含有CAR的细胞递送活化刺激。CAR能够特异性地重定向免疫效应细胞,从而引发增殖、细胞因子产生、吞噬作用或靶抗原表达细胞的细胞杀死。The CAR of the present invention includes an extracellular domain (also referred to as a binding domain or an antigen binding domain) that binds to BCMA, a transmembrane domain, and an intracellular domain or an intracellular signaling domain. The binding of the anti-BCMA antigen binding domain of the CAR to the BCMA on the surface of the target cell results in the aggregation of the CAR and delivers an activation stimulus to the CAR-containing cells. CAR can specifically redirect immune effector cells, thereby triggering proliferation, cytokine production, phagocytosis, or cell killing of target antigen-expressing cells.
在本发明的一些实施方式中,CAR包含如下结构域:人源化的特异性结合BCMA的胞外结合域;跨膜域;一个或多个胞内信号传导域。在一些实施方式中,CAR顺序性地包含人源化的BCMA抗原结合片段的胞外结合域;一个或多个间隔区域;跨膜域;一个或多个胞内信号传导域。In some embodiments of the present invention, the CAR includes the following domains: a humanized extracellular binding domain that specifically binds to BCMA; a transmembrane domain; and one or more intracellular signaling domains. In some embodiments, the CAR sequentially comprises the extracellular binding domain of a humanized BCMA antigen-binding fragment; one or more spacer regions; a transmembrane domain; and one or more intracellular signaling domains.
“胞外抗原结合域”或“胞外结合域”可互换使用,并为CAR提供特异性结合感兴趣的靶抗原BCMA的能力。结合域可以衍生自天然、合成、半合成或重组来源。优选的是重组来源的sdAb。"Extracellular antigen binding domain" or "extracellular binding domain" can be used interchangeably and provide CAR with the ability to specifically bind to the target antigen of interest BCMA. The binding domain can be derived from natural, synthetic, semi-synthetic or recombinant sources. The sdAb of recombinant origin is preferred.
“特异性结合”应如本领域技术人员所理解的那样,本领域技术人员清楚地知道可用于测试结合和结合特异性的各种实验方法或手段。确定平衡缔合或平衡解离常数的方法是本领域已知的。在许多蛋白质间相互作用中,可能会出现一些交叉反应或背景结合,但这并不损害CAR和表位之间结合的“特异性”。“特异性结合”描述了抗-BCMA抗体或其抗原结合片段(也包含它们的CAR)与BCMA的结合,其结合亲和力高于背景结合。"Specific binding" should be as understood by those skilled in the art, and those skilled in the art are clearly aware of various experimental methods or means that can be used to test binding and binding specificity. Methods of determining equilibrium association or equilibrium dissociation constants are known in the art. In many protein-protein interactions, some cross-reactions or background binding may occur, but this does not damage the "specificity" of the binding between CAR and epitope. "Specific binding" describes the binding of an anti-BCMA antibody or its antigen-binding fragment (also including their CAR) to BCMA, and its binding affinity is higher than background binding.
“抗原(Ag)”是指可以在动物中刺激抗体产生或T细胞应答的化合物、组合物或物质。在本发明的一些实施方式中,靶抗原是BCMA多肽的表位。“表位”是指与结合剂结合的抗原区域。表位可以由连续氨基酸形成,或者导致蛋白质的三级结构的非连续氨基酸形成。"Antigen (Ag)" refers to a compound, composition, or substance that can stimulate antibody production or T cell response in an animal. In some embodiments of the invention, the target antigen is an epitope of a BCMA polypeptide. "Epitope" refers to the region of an antigen that binds to a binding agent. Epitopes can be formed by consecutive amino acids, or non-contiguous amino acids that result in the tertiary structure of the protein.
“单链Fv”或“scFv”抗体片段包含抗体的VH域和VL域,其中这些结构域以单一多肽链且以任一方向存在(例如,VL-VH或VH-VL)。通常,scFv多肽还包含VH域和VL域之间的多肽接头,该多肽接头使得scFv能够形成用于抗原结合的所需结构。在优选的实施方式中,本发明的CAR包含抗原特异性结合域,该抗原特异性结合域是scFv并且可以是鼠、人或人源化scFv。可以从对希望的靶标有特异性的杂交瘤 的V区基因克隆单链抗体。在特别的实施方式中,抗原特异性结合域是结合人BCMA多肽的人源化scFv。适用于构建本发明的抗BCMA的CAR的可变重链的示例性实例包括但不限于SEQ ID NO:2中所示的氨基酸序列。适用于构建本发明的抗BCMA CAR的可变轻链的示例性实例包括抗BCMA抗体的任何可变轻链,包括但不限于CN109641012A中的可变轻链。A "single chain Fv" or "scFv" antibody fragment comprises the VH domain and the VL domain of an antibody, where these domains exist as a single polypeptide chain and in either direction (for example, VL-VH or VH-VL). Generally, the scFv polypeptide also contains a polypeptide linker between the VH domain and the VL domain, which allows the scFv to form the desired structure for antigen binding. In a preferred embodiment, the CAR of the present invention comprises an antigen-specific binding domain, which is a scFv and can be a murine, human or humanized scFv. The single-chain antibody can be cloned from the V region gene of the hybridoma specific for the desired target. In a particular embodiment, the antigen-specific binding domain is a humanized scFv that binds to a human BCMA polypeptide. Illustrative examples of variable heavy chains suitable for constructing the anti-BCMA CAR of the present invention include but are not limited to the amino acid sequence shown in SEQ ID NO: 2. Illustrative examples of the variable light chain suitable for constructing the anti-BCMA CAR of the present invention include any variable light chain of an anti-BCMA antibody, including but not limited to the variable light chain in CN109641012A.
抗体和抗体片段:Antibodies and antibody fragments:
CAR包含胞外抗原结合域,其包含结合B细胞成熟抗原(BCMA)多肽的抗体或抗体片段。因此,本发明的抗体或抗体片段包括但不限于多克隆、单克隆、双特异性、人、人源化或嵌合的抗体、单链片段(scFv)、单可变片段(ssFv)、单结构域抗体(例如来自纳米抗体的VHH片段)、Fab片段、F(ab′) 2片段、由Fab表达文库产生的片段、抗独特型抗体和表位结合片段或任何上述的组合,条件是它们具有本发明所述CAR的相似结合特性,优选包含如本文所述的相应的CDR、或VH和VL区。微小抗体和多价抗体如双价抗体、三价抗体、四价抗体和五价抗体也可用于本发明的方法中。本发明的免疫球蛋白分子可以是免疫球蛋白分子的任何类别(即IgG、IgE、IgM、IgD和IgA)或亚类。因此,如本文所用,术语抗体还包括由本发明的CAR包含的抗体和抗体片段,其通过修饰完整抗体产生或使用重组DNA方法重新合成。 The CAR contains an extracellular antigen binding domain, which contains an antibody or antibody fragment that binds to a B cell maturation antigen (BCMA) polypeptide. Therefore, the antibodies or antibody fragments of the present invention include but are not limited to polyclonal, monoclonal, bispecific, human, humanized or chimeric antibodies, single chain fragments (scFv), single variable fragments (ssFv), single Domain antibodies (such as VHH fragments from Nanobodies), Fab fragments, F(ab′) 2 fragments, fragments generated from Fab expression libraries, anti-idiotypic antibodies and epitope binding fragments or any combination of the above, provided that they It has the similar binding characteristics of the CAR of the present invention, and preferably comprises the corresponding CDR, or VH and VL regions as described herein. Mini-antibodies and multivalent antibodies such as diabodies, trivalent antibodies, tetravalent antibodies, and pentavalent antibodies can also be used in the methods of the present invention. The immunoglobulin molecules of the present invention can be of any class (ie, IgG, IgE, IgM, IgD, and IgA) or subclasses of immunoglobulin molecules. Therefore, as used herein, the term antibody also includes antibodies and antibody fragments comprised by the CAR of the present invention, which are produced by modifying intact antibodies or re-synthesized using recombinant DNA methods.
如本文所用,“抗体”通常是指由基本上由免疫球蛋白基因或免疫球蛋白基因片段编码的一种或多种多肽组成的蛋白质。当使用术语“抗体”时,也可以认为是指“抗体片段”。任选地,抗体或抗体片段可以与其他蛋白或其他蛋白的融合蛋白化学缀合成或表达为带有其他蛋白的融合蛋白。在一些实施方案中,本发明的抗体或抗原结合片段包含于多特异性抗体上,例如双特异性抗体。这样的多特异性抗体可通过已知的方法产生,例如交联两种或更多种相同类型或不同类型的抗体、抗原结合片段(例如scFv)。制备多特异性抗体的示例性方法包括在PCT专利公开文本第WO2013/163427号中描述的那些,通过引用将其整体并入本文。As used herein, "antibody" generally refers to a protein consisting of one or more polypeptides substantially encoded by immunoglobulin genes or immunoglobulin gene fragments. When the term "antibody" is used, it can also be considered to mean "antibody fragment". Optionally, antibodies or antibody fragments can be chemically conjugated with other proteins or fusion proteins of other proteins, or expressed as fusion proteins with other proteins. In some embodiments, the antibody or antigen-binding fragment of the invention is contained on a multispecific antibody, such as a bispecific antibody. Such multispecific antibodies can be produced by known methods, such as cross-linking two or more of the same type or different types of antibodies, antigen-binding fragments (e.g., scFv). Exemplary methods for preparing multispecific antibodies include those described in PCT Patent Publication No. WO2013/163427, which is incorporated herein by reference in its entirety.
本发明的结合域多肽和抗体或抗体片段或CAR蛋白的亲和力可以使用常规技术容易地确定,例如通过竞争性ELISA(酶联免疫吸附测定)、或使用表面等离子共振装置(如Biacore)。The affinity of the binding domain polypeptide of the present invention and the antibody or antibody fragment or CAR protein can be easily determined using conventional techniques, for example, by competitive ELISA (enzyme-linked immunosorbent assay), or using a surface plasmon resonance device (such as Biacore).
可以使用本领域已知的方法制备人源化抗体,该人源化抗体包含本发明抗体或抗体片段的一个或多个CDR或包含衍生自所述抗体或抗体片段的一个或多个CDR。例如,一般可以使用四个步骤来使单克隆抗体人源化:(1)确定起始抗体轻链和重链可变域的核苷酸和预测的氨基酸序列;(2)设计人源化抗体,即决定在人源化过程中使用哪个抗体框架区;(3)开展人源化方法/技术;和(4)人源化抗体的转染和表达。例如,参见,美国专利第6,180,370号。A humanized antibody can be prepared using methods known in the art, the humanized antibody comprising one or more CDRs of the antibody or antibody fragment of the present invention or one or more CDRs derived from the antibody or antibody fragment. For example, four steps can generally be used to humanize a monoclonal antibody: (1) Determine the nucleotide and predicted amino acid sequences of the light chain and heavy chain variable domains of the starting antibody; (2) Design the humanized antibody , That is, decide which antibody framework region to use in the humanization process; (3) carry out humanization methods/techniques; and (4) transfection and expression of humanized antibodies. For example, see, U.S. Patent No. 6,180,370.
术语人源化抗体意指免疫球蛋白的至少一部分框架区和任选的CDR区的一部分或其他参与结合的区域来源于或调整为人免疫球蛋白序列。小鼠单克隆抗体的人源化、嵌合或部分人源化形式可以例如通过重组DNA技术制备。通过重组DNA技术将非人抗体的CDR区与人恒定区连接,可以产生人源化形式的小鼠抗体(Queen等人,1989;WO 90/07861)。可供选择地,用于本发明方法的单克隆抗体可以是人单克隆抗体。人抗体可以例如使用噬菌体展示法来获得(WO 91/17271;WO 92/01047)。The term humanized antibody means that at least a part of the framework region and optionally a part of the CDR region or other regions involved in binding of the immunoglobulin are derived from or adjusted to human immunoglobulin sequences. Humanized, chimeric or partially humanized forms of mouse monoclonal antibodies can be prepared, for example, by recombinant DNA technology. Linking the CDR regions of non-human antibodies with human constant regions by recombinant DNA technology can produce humanized mouse antibodies (Queen et al., 1989; WO 90/07861). Alternatively, the monoclonal antibody used in the method of the present invention may be a human monoclonal antibody. Human antibodies can be obtained, for example, using the phage display method (WO 91/17271; WO 92/01047).
如本文所用,人源化抗体还指非人(例如鼠、骆驼、美洲驼、鲨)抗体的形式,其是含有衍生自非人免疫球蛋白的最小序列的特异性嵌合免疫球蛋白、免疫球蛋白链或其片段(例如Fv、Fab、Fab′、F(ab′) 2或抗体的其他抗原结合亚序列,例如vHH。 As used herein, a humanized antibody also refers to the form of a non-human (e.g., murine, camel, llama, shark) antibody, which is a specific chimeric immunoglobulin, immunoglobulin containing minimal sequence derived from non-human immunoglobulin. Globulin chains or fragments thereof (e.g. Fv, Fab, Fab', F(ab') 2 or other antigen binding subsequences of antibodies, such as vHH.
如本文所用,人或人源化抗体或抗体片段是指具有与人产生的抗体的氨基酸序列相对应的氨基酸序列的抗体,且可使用本领域已知的制备抗体的任何技术制备。可以通过竞争性结合实验或其他方式选择人抗体或其片段,以确定其具有与特定小鼠抗体相同的表位结合特异性。As used herein, a human or humanized antibody or antibody fragment refers to an antibody having an amino acid sequence corresponding to the amino acid sequence of a human-produced antibody, and can be prepared using any technique known in the art for preparing antibodies. Human antibodies or fragments thereof can be selected through competitive binding experiments or other methods to determine that they have the same epitope binding specificity as a specific mouse antibody.
可变区和CDRVariable region and CDR
抗体的可变区是指单独的抗体轻链的可变区或抗体重链的可变区或其两者的组合。重链可变区和轻链可变区各自由通过三个互补决定区(CDR)连接的四个框架区(FR)组成,所述三个互补决定区也称为高变区。每条链中的CDR由FR紧密靠近地保持在一起,并且与来自其他链的CDR一起,有助于抗体的抗原结合位点的形成。The variable region of an antibody refers to the variable region of an antibody light chain alone or the variable region of an antibody heavy chain or a combination of both. The heavy chain variable region and the light chain variable region each consist of four framework regions (FR) connected by three complementarity determining regions (CDR), which are also referred to as hypervariable regions. The CDRs in each chain are held in close proximity by FRs, and together with CDRs from other chains, contribute to the formation of the antigen binding site of the antibody.
CDR主要负责结合抗原表位。有许多可用于确定CDR氨基酸序列边界的方法,例如Kabat等人,Sequences of Proteins of Immunological  Interest,(第5版,1991,国立卫生研究院,Bethesda Md,“Kabat”编号方案);Al-Lazikani B,Lesk AM,Chothia C.Standard conformations for the canonical structures of immunoglobulins.J.Mol.Biol.1997;273:927-48(“Chothia”编号方案);Lefranc等(“IMGT unique numbering for immunoglobulin and T cell receptor varia ble domain sand Ig superfamily V-like domains,”Dev.Comp.Immunol.,27:55-77,2003;“IMGT”编号方案);或North,B,Lehmann A,Dunbrack R.A new clustering of antibody CDR loop conformations:J.Mol.Biol.(2011),406(2):228-256。可供选择的方法除了上述方法外,还包括随着生物信息学的发展而开发的新的解决方案。尽管Kabat是最常用的方法,但是CDR可以指通过一种或多种方法,或通过这些方法的组合定义的CDR。CDR is mainly responsible for binding antigen epitopes. There are many methods that can be used to determine the boundaries of CDR amino acid sequences, such as Kabat et al., Sequences of Proteins of Immunological Interest, (5th edition, 1991, National Institutes of Health, Bethesda Md, "Kabat" numbering scheme); Al-Lazikani B , Lesk AM, Chothia C. Standard conformations for the canonical structures of immunoglobulins. J. Mol. Biol. 1997; 273: 927-48 (“Chothia” numbering plan); Lefranc et al. (“IMGT unique numbering for immunoglobulin and T cell receptor varia ble domain sand Ig superfamily V-like domains,"Dev.Comp.Immunol.,27:55-77,2003; "IMGT" numbering scheme); or North,B,LehmannA,Dunbrack RA new clustering of antibodyCDR loop conformations: J.Mol.Biol.(2011),406(2):228-256. In addition to the above methods, alternative methods include new solutions developed with the development of bioinformatics. Although Kabat is the most commonly used method, CDR can refer to a CDR defined by one or more methods, or by a combination of these methods.
示例性地,下表1中示出了根据North、Kabat、Chothia和IMGT编号方案确定的重链可变区CDR在各自VHH中的位置。本文中所涉及的CDR可以是通过同一方法所确定的CDR或CDR组合,或不同方法所确定的CDR或CDR组合。例如,本发明的抗体可以含有通过North、Kabat、Chothia和IMGT中任一方法所确定的Lead1-19中之一的HCDR1、HCDR2和HCDR3。或本发明的抗体含有通过North确定的Lead1的HCDR1、HCDR2和通过Kabat所确定Lead2-19中之一的HCDR3。本领域技术人员可以自由选择不同方法所鉴定的CDR,并可以自由组合这些CDR。Illustratively, Table 1 below shows the positions of the heavy chain variable region CDRs in the respective VHHs according to the North, Kabat, Chothia, and IMGT numbering schemes. The CDRs referred to herein may be CDRs or CDR combinations determined by the same method, or CDRs or CDR combinations determined by different methods. For example, the antibody of the present invention may contain HCDR1, HCDR2, and HCDR3 of one of Lead1-19 determined by any of North, Kabat, Chothia, and IMGT. Or the antibody of the present invention contains HCDR1, HCDR2 of Lead1 determined by North and HCDR3 of one of Lead2-19 determined by Kabat. Those skilled in the art can freely choose the CDRs identified by different methods, and can freely combine these CDRs.
表1Table 1
Figure PCTCN2020113046-appb-000001
Figure PCTCN2020113046-appb-000001
Figure PCTCN2020113046-appb-000002
Figure PCTCN2020113046-appb-000002
Figure PCTCN2020113046-appb-000003
Figure PCTCN2020113046-appb-000003
在一些实施方式中,本发明提供包含于CAR的抗体或其片段,其中所述抗体或其片段包含与本发明的抗体的至少一个CDR、至少两个、或至少三个CDR基本上相同的至少一个CDR、至少两个或至少三个CDR。在一些实施方式中,所述至少一个、两个或三个CDR与本发明的抗体的至少一个、两个或三个CDR具有至少约70%、75%、85%、86%、87%、88%、89%、90%、95%、96%、97%、98%或99%同一性。应当理解,出于本发明的目的,通常保留结合特异性和/或总体活性,尽管活性程度与所述抗体相比可以变化(可以更大或更小)。In some embodiments, the present invention provides an antibody or fragment thereof contained in a CAR, wherein the antibody or fragment thereof comprises at least one CDR, at least two, or at least three CDRs that are substantially the same as the antibody of the present invention. One CDR, at least two or at least three CDRs. In some embodiments, the at least one, two, or three CDRs have at least about 70%, 75%, 85%, 86%, 87%, and at least one, two, or three CDRs of the antibody of the present invention. 88%, 89%, 90%, 95%, 96%, 97%, 98%, or 99% identity. It should be understood that for the purposes of the present invention, the binding specificity and/or overall activity is generally retained, although the degree of activity may vary (which may be larger or smaller) compared to the antibody.
在某些实施方案中,可在一个或多个CDR内存在替换、插入或缺失,只要这样的改变基本不降低该抗体结合抗原的能力即可。例如,可在CDR中进行基本不降低结合亲和力的保守改变(例如,如本文提供的保守替换)。在上文所提供的变体VH和VL序列的某些实施方案中,每个CDR可以 是未改变的,或者包含不多于一个、两个或三个氨基酸替换、插入或缺失。例如,本发明的抗体中所包含的CDR序列SEQ ID NO:10、11或12中的一个、二个或三个氨基酸可以被同类氨基酸所替换、插入或缺失,并仍然保留与人BCMA结合能力。或者本发明的抗体中所包含的CDR序列SEQ ID NO:16、17或18中的一个、二个或三个氨基酸可以被同类氨基酸所替换、插入或缺失,并仍然保留与人BCMA结合能力。或者,本发明的抗体中所包含的CDR序列SEQ ID NO:20、21或22中的一个、二个或三个氨基酸可以被同类氨基酸所替换、插入或缺失,并仍然保留与人BCMA结合能力。或者,本发明的抗体包含表1中所示出的Lead1、Lead2、Lead3、Lead4、Lead5、Lead6、Lead7、Lead8、Lead9、Lead10、Lead11、Lead12、Lead13、Lead14、Lead15、Lead16、Lead17、Lead18、或Lead19的用同一方法所鉴定的HCDR1、HCDR2和HCDR3,或用不同方法所鉴定的HCDR1、HCDR2和HCDR3的组合。In certain embodiments, there may be substitutions, insertions, or deletions in one or more CDRs, as long as such changes do not substantially reduce the ability of the antibody to bind to the antigen. For example, conservative changes that do not substantially reduce binding affinity can be made in the CDRs (e.g., conservative substitutions as provided herein). In certain embodiments of the variant VH and VL sequences provided above, each CDR may be unaltered or contain no more than one, two or three amino acid substitutions, insertions or deletions. For example, one, two or three amino acids of the CDR sequence SEQ ID NO: 10, 11 or 12 contained in the antibody of the present invention can be replaced, inserted or deleted by the same amino acid, and still retain the ability to bind to human BCMA . Alternatively, one, two or three amino acids of the CDR sequence SEQ ID NO: 16, 17, or 18 contained in the antibody of the present invention can be replaced, inserted or deleted by the same type of amino acid, and still retain the ability to bind to human BCMA. Alternatively, one, two or three amino acids of the CDR sequence SEQ ID NO: 20, 21 or 22 contained in the antibody of the present invention can be replaced, inserted or deleted by the same amino acid, and still retain the ability to bind to human BCMA . Alternatively, the antibody of the present invention includes Lead1, Lead2, Lead3, Lead4, Lead5, Lead6, Lead7, Lead8, Lead9, Lead10, Lead11, Lead12, Lead13, Lead14, Lead15, Lead16, Lead17, Lead18, Or Lead19's HCDR1, HCDR2, and HCDR3 identified by the same method, or a combination of HCDR1, HCDR2, and HCDR3 identified by different methods.
对于可突变的位点,可以参考如Cunningham和Wells(1989)Science,244:1081-1085所述。这一可用于鉴定可被靶向用于突变的抗体的残基或区的方法被称为“丙氨酸扫描诱变”。在该方法中,鉴定了残基或一组靶残基(例如,带电残基,如arg、asp、his、lys和glu),并用中性或带负电的氨基酸(例如丙氨酸或聚丙氨酸)进行替换,以确定抗体与抗原的相互作用是否受到影响。可考虑在显示对初始替换的功能敏感性的氨基酸位置处引入另一些替换。或者,或此外,使用抗原-抗体复合物的晶体结构来鉴定抗体与抗原之间的接触点。这样的接触残基和相邻残基可作为替换的候选物而被靶向。可筛选变体以确定它们是否包含期望的性质。For mutable sites, reference can be made to the description of Cunningham and Wells (1989) Science, 244:1081-1085. This method that can be used to identify residues or regions of antibodies that can be targeted for mutation is called "alanine scanning mutagenesis." In this method, residues or a set of target residues (e.g., charged residues such as arg, asp, his, lys, and glu) are identified, and neutral or negatively charged amino acids (e.g., alanine or polyalanine) are used. Acid) to determine whether the interaction between the antibody and the antigen is affected. It may be considered to introduce additional substitutions at amino acid positions that show functional sensitivity to the initial substitution. Alternatively, or in addition, the crystal structure of the antigen-antibody complex is used to identify contact points between the antibody and the antigen. Such contact residues and neighboring residues can be targeted as replacement candidates. Variants can be screened to determine whether they contain the desired properties.
例如,如在本公开文本中所显示的那样,将Lead 1(SEQ ID NO:2)中的CDR1(AAS GFT LDYYAIG)替换为AAS DST VELYAIG后,所述的Lead 3抗体仍然保持活性。也就是说,替换了5个氨基酸残基后,突变后的抗体仍保持活性。 For example, as shown in this disclosure, after replacing CDR1 (AAS GF T LDY YAIG) in Lead 1 (SEQ ID NO: 2) with AAS DS T VEL YAIG, the Lead 3 antibody still remains active. In other words, after replacing 5 amino acid residues, the mutant antibody still retains activity.
因此,应当明显理解,尽管本申请文件的权利要求书没有具体限定突变后的CDR的具体序列,本领域技术人员根据现有技术可以进行的突变(在保留抗体的活性的情况下,例如,在本发明所鉴定的CDR区域例如替换、缺失或添加1、2或3个氨基酸残基,尽管上述替换了5个氨基酸残基),以发现能保留抗体活性的突变的CDR,并且包含突变CDR的抗体属于本发明抗 体的明显变体,因而被涵盖在本发明的保护范围之内。Therefore, it should be clearly understood that although the claims of this application file do not specifically define the specific sequence of the mutated CDR, those skilled in the art can perform mutations according to the prior art (with the preservation of the activity of the antibody, for example, in The CDR regions identified in the present invention, such as substitution, deletion, or addition of 1, 2, or 3 amino acid residues, even though 5 amino acid residues are replaced above), to find mutant CDRs that retain antibody activity and include mutant CDRs. The antibody is an obvious variant of the antibody of the present invention, and therefore is covered by the scope of protection of the present invention.
嵌合抗原受体的进一步说明Further explanation of chimeric antigen receptor
在某些实施方式中,本发明的CAR可以包含为了分子的适当间隔和构象而添加的在各个域之间的接头残基,例如包含氨基酸序列的接头,其连接VH域和VL域并提供与两个亚结合域的相互作用相容的间隔区功能,使得所得多肽保持对靶分子的特异性结合亲和力。本发明的CAR可包含一个、两个、三个、四个或五个或更多个接头。在特别的实施方式中,接头的长度为约1至约25个氨基酸、约5至约20个氨基酸、或约10至约20个氨基酸、或任何适当长度的氨基酸。In some embodiments, the CAR of the present invention may include linker residues between each domain added for proper spacing and conformation of the molecule, such as a linker containing an amino acid sequence, which connects the VH domain and the VL domain and provides The compatible spacer function of the interaction of the two sub-binding domains allows the resulting polypeptide to maintain specific binding affinity for the target molecule. The CAR of the present invention may contain one, two, three, four, or five or more linkers. In particular embodiments, the length of the linker is about 1 to about 25 amino acids, about 5 to about 20 amino acids, or about 10 to about 20 amino acids, or any suitable length of amino acids.
接头的示例性实例包括甘氨酸聚合物;甘氨酸-丝氨酸聚合物;甘氨酸-丙氨酸聚合物;丙氨酸-丝氨酸聚合物;本领域已知的其他柔性接头,例如惠特洛接头。甘氨酸和甘氨酸-丝氨酸聚合物是相对非结构化的,因此可以作为融合蛋白的各域或其中一些域(例如本文所述的CAR)之间的连接。Illustrative examples of linkers include glycine polymers; glycine-serine polymers; glycine-alanine polymers; alanine-serine polymers; other flexible linkers known in the art, such as Whitlow linkers. Glycine and glycine-serine polymers are relatively unstructured, and therefore can be used as links between domains or some of the domains (such as the CAR described herein) of the fusion protein.
在特别的实施方式中,CAR的结合域之后是一个或多个“间隔区”或“间隔区多肽”,相当于连接子,其在将抗原结合域远离效应细胞表面,以使得细胞与细胞之间能够适当接触、抗原结合和活化。在某些实施方式中,间隔区域是免疫球蛋白的一部分,包括但不限于一个或多个重链恒定区,例如CH2和CH3。间隔区域可包括天然存在的免疫球蛋白铰链区或改变的免疫球蛋白铰链区的氨基酸序列。在一种实施方式中,间隔区域包括IgG1或IgG4的CH2和CH3结构域。In a particular embodiment, the CAR binding domain is followed by one or more "spacers" or "spacer polypeptides", which are equivalent to linkers, which move the antigen-binding domain away from the surface of the effector cell so that the cell-to-cell interaction Appropriate contact, antigen binding and activation are possible. In certain embodiments, the spacer region is part of an immunoglobulin, including but not limited to one or more heavy chain constant regions, such as CH2 and CH3. The spacer region may include the amino acid sequence of a naturally occurring immunoglobulin hinge region or an altered immunoglobulin hinge region. In one embodiment, the spacer region includes the CH2 and CH3 domains of IgG1 or IgG4.
在一些实施方式中,CAR的结合域之后可以是一个或多个“铰链域”,其在将抗原结合域远离效应细胞表面,以使得细胞与细胞之间能够适当接触、抗原结合和活化。CAR可以在结合域和跨膜域(TM)之间包含一个或多个铰链域。铰链域可以为天然、合成、半合成或重组来源。铰链域可包括天然存在的免疫球蛋白铰链区或改变的免疫球蛋白铰链区的氨基酸序列。适用于本文所述CAR的示例性铰链域包括衍生自1型膜蛋白(例如CD8α、CD4、CD28、PD1、CD152和CD7)的胞外区的铰链区,它们可以是来自这些分子的野生型铰链区,或可以是改变的。在另一种实施方式中,铰链域包含PD1、CD152或CD8α铰链区。In some embodiments, the binding domain of the CAR may be followed by one or more "hinge domains", which move the antigen binding domain away from the surface of the effector cell to enable proper cell-to-cell contact, antigen binding, and activation. The CAR may contain one or more hinge domains between the binding domain and the transmembrane domain (TM). The hinge domain can be of natural, synthetic, semi-synthetic or recombinant origin. The hinge domain may include the amino acid sequence of a naturally occurring immunoglobulin hinge region or an altered immunoglobulin hinge region. Exemplary hinge domains suitable for use in the CARs described herein include hinge regions derived from the extracellular region of type 1 membrane proteins (e.g., CD8α, CD4, CD28, PD1, CD152, and CD7), which can be wild-type hinges from these molecules Zone, or can be changed. In another embodiment, the hinge domain comprises a PD1, CD152, or CD8α hinge region.
“跨膜域”是CAR的一部分,其融合胞外结合部分和胞内信号传导域并将CAR锚定在免疫效应细胞的质膜上。TM域可以衍生自天然、合成、半合成或重组来源。TM域可以衍生自T细胞受体的α、β或ζ链、CD3ε、CD3ζ、CD4、CD5、CD8α、CD9、CD16、CD22、CD27、CD28、CD33、CD37、CD45、CD64、CD80、CD86、CD134、CD137、CD152、CD154和PD1。在一种实施方式中,本发明的CAR包含衍生自CD8α或CD28的TM结构域。The "transmembrane domain" is a part of the CAR, which fuses the extracellular binding part and the intracellular signal transduction domain and anchors the CAR on the plasma membrane of immune effector cells. The TM domain can be derived from natural, synthetic, semi-synthetic or recombinant sources. The TM domain can be derived from the α, β or ζ chain of the T cell receptor, CD3ε, CD3ζ, CD4, CD5, CD8α, CD9, CD16, CD22, CD27, CD28, CD33, CD37, CD45, CD64, CD80, CD86, CD134 , CD137, CD152, CD154 and PD1. In one embodiment, the CAR of the present invention comprises a TM domain derived from CD8α or CD28.
在特别的实施方式中,本发明的CAR包含胞内信号传导域。“胞内信号传导域”是指参与将有效的抗BCMACAR与人BCMA多肽结合的信息转导到免疫效应细胞内部以引发效应细胞功能(例如活化、产生细胞因子、增殖和细胞毒活性,所述细胞毒活性包括向CAR所结合的靶细胞释放细胞毒性因子)或由抗原结合胞外CAR域引发的其他细胞反应。术语“效应功能”是指免疫效应细胞的特化功能。例如,T细胞的效应功能可以是细胞溶解活性或包括细胞因子分泌在内的帮助或活性。术语“胞内信号传导域”是指蛋白质中转导效应功能信号并指导细胞执行特化功能的部分。In a particular embodiment, the CAR of the present invention includes an intracellular signaling domain. "Intracellular signaling domain" refers to the information involved in the effective anti-BCMACAR and human BCMA polypeptide binding to the inside of immune effector cells to trigger effector cell functions (such as activation, cytokine production, proliferation and cytotoxic activity, the Cytotoxic activity includes the release of cytotoxic factors to the target cells bound by the CAR or other cellular responses triggered by antigen binding to the extracellular CAR domain. The term "effector function" refers to the specialized function of immune effector cells. For example, the effector function of T cells may be cytolytic activity or assistance or activity including cytokine secretion. The term "intracellular signal transduction domain" refers to the part of a protein that transduces effector function signals and directs cells to perform specialized functions.
本发明的CAR包含一个或多个共刺激信号传导域,以增强表达CAR受体的T细胞的功效、扩增和/或记忆形成。如本文所用,术语“共刺激信号传导域”是指CAR分子的胞内信号传导域,提供在与抗原结合后T淋巴细胞的有效活化和功能所需的第二信号。The CAR of the present invention contains one or more costimulatory signal transduction domains to enhance the efficacy, expansion and/or memory formation of T cells expressing CAR receptors. As used herein, the term "costimulatory signaling domain" refers to the intracellular signaling domain of CAR molecules, which provides a second signal required for the effective activation and function of T lymphocytes after binding to an antigen.
示例性地,本发明的CAR包含本发明所述的抗体。进一步示例性地,本发明的CAR除了为SEQ ID NO:6所示那样外,还可以为用本发明的其他抗体,例如Lead2、Lead3、Lead4、Lead5、Lead6、Lead7、Lead8、Lead9、Lead10、Lead11、Lead12、Lead13、Lead14、Lead15、Lead16、Lead17、Lead18、或Lead19替换SEQ ID NO:6中的Lead1后获得的CAR。Exemplarily, the CAR of the present invention includes the antibody of the present invention. Further exemplarily, in addition to SEQ ID NO: 6, the CAR of the present invention can also be used with other antibodies of the present invention, such as Lead2, Lead3, Lead4, Lead5, Lead6, Lead7, Lead8, Lead9, Lead10, The CAR obtained by replacing Lead1 in SEQ ID NO: 6 with Lead11, Lead12, Lead13, Lead14, Lead15, Lead16, Lead17, Lead18, or Lead19.
蛋白protein
“蛋白”、“多肽片段”和“多肽”可互换使用,除非有相反的说明,并且根据常规含义,即作为氨基酸序列使用。蛋白不限于特定长度,例如,它们可以包含全长蛋白质序列或全长蛋白质的片段,并且可以包 括多肽的翻译后修饰(例如糖基化、乙酰化、磷酸化等)以及包括天然存在的和非天然存在的本领域已知的其他修饰。"Protein", "polypeptide fragment" and "polypeptide" can be used interchangeably, unless otherwise stated, and according to conventional meaning, that is, used as an amino acid sequence. Proteins are not limited to a specific length. For example, they can include full-length protein sequences or fragments of full-length proteins, and can include post-translational modifications of polypeptides (such as glycosylation, acetylation, phosphorylation, etc.) and include naturally-occurring and non- Naturally occurring other modifications known in the art.
在各种实施方式中,本发明的CAR多肽或蛋白包含在蛋白质N末端的能在翻译时或翻译后指导蛋白质转移的信号(或前导区)序列。可以使用各种熟知的重组和/或合成技术制备多肽。本发明的多肽具体包括本公开的CAR,或具有对本文公开的CAR的一个或多个(例如1-20个,1-10个或1-5个)氨基酸缺失、添加和/或替换的序列。In various embodiments, the CAR polypeptide or protein of the present invention includes a signal (or leader region) sequence at the N-terminus of the protein that can direct protein transfer during or after translation. A variety of well-known recombinant and/or synthetic techniques can be used to prepare polypeptides. The polypeptide of the present invention specifically includes the CAR of the present disclosure, or has a sequence that deletes, adds, and/or replaces one or more (for example, 1-20, 1-10, or 1-5) amino acids of the CAR disclosed herein .
核酸Nucleic Acid
如本文所用,术语“多核苷酸”是指mRNA、RNA、基因组RNA(gRNA)、正链RNA(RNA(+))、负链RNA(RNA(-))、基因组DNA(gDNA)、互补DNA(cDNA)或重组DNA。多核苷酸包括单链和双链多核苷酸。优选地,本发明的多核苷酸包括与本文所述的任何参考序列具有至少约70%,71%,72%,73%,74%,75%,76%,77%,78%,79%,80%,81%,82%,83%,84%,85%,86%,87%,88%,89%,90%,91%,92%,94%,95%,96%,97%,98%,99%,99.5%,99.9%或100%的序列同一性的多核苷酸或变体,通常其中变体保持参考序列的至少一种生物学活性。As used herein, the term "polynucleotide" refers to mRNA, RNA, genomic RNA (gRNA), positive-strand RNA (RNA(+)), negative-strand RNA (RNA(-)), genomic DNA (gDNA), complementary DNA (cDNA) or recombinant DNA. Polynucleotides include single-stranded and double-stranded polynucleotides. Preferably, the polynucleotide of the present invention includes at least about 70%, 71%, 72%, 73%, 74%, 75%, 76%, 77%, 78%, 79% of any reference sequence described herein. , 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 94%, 95%, 96%, 97 %, 98%, 99%, 99.5%, 99.9% or 100% sequence identity polynucleotides or variants, usually wherein the variant retains at least one biological activity of the reference sequence.
示例性地,本发明所述的编码BCMA结合域-CD8αhinge-CD8 TM-4-1BB-CD3ζ融合蛋白的多核苷酸的序列是任何能够编码该融合蛋白的任何DNA序列,优选地,该序列为SEQ ID NO:5或其互补序列。另一方面,本发明所述的编码BCMA结合域-CD8αhinge-CD8 TM-4-1BB-CD3ζ融合蛋白的多核苷酸的序列可为在严紧条件下与由SEQ ID NO:5的多核苷酸序列进行杂交、且编码该融合蛋白的多多核苷酸或其互补序列; Illustratively, a polynucleotide sequence encoding the binding domain of BCMA -CD8αhinge-CD8 TM -4-1BB-CD3ζ fusion proteins of the present invention is any DNA sequence capable of encoding any of the fusion protein, preferably, the sequence SEQ ID NO: 5 or its complementary sequence. On the other hand, -4-1BB-CD3ζ a polynucleotide sequence of the fusion protein may be under stringent conditions to SEQ ID NO encoded by the present invention, the BCMA binding domain -CD8αhinge-CD8 TM: 5 polynucleotide sequence of Hybridize and encode the polynucleotide or its complementary sequence of the fusion protein;
本文所述的“严紧条件”,可以为低严紧条件、中严紧条件、高严紧条件中的任一种,优选为高严紧条件。示例性地,“低严紧条件”可为30℃、5×SSC、5×Denhardt液、0.5%SDS、52%甲酰胺的条件;“中严紧条件”可为40℃、5×SSC、5×Denhardt液、0.5%SDS、52%甲酰胺的条件;“高严紧条件”可为50℃、5×SSC、5×Denhardt液、0.5%SDS、52%甲酰胺的条件。本领域技术人员应当理解温度越高越能得到高同源性的多多核苷酸。另外,本领域技术人员可以选择影响杂交的严紧度的温度、探针浓度、探针长度、离子强度、时间、盐浓度等多个因素形成的综合结果来实现相应的严紧度。The "stringent conditions" described herein may be any of low stringency conditions, medium stringency conditions, and high stringency conditions, and preferably high stringency conditions. Exemplarily, "low stringency conditions" may be 30°C, 5×SSC, 5×Denhardt solution, 0.5% SDS, 52% formamide; “medium stringency conditions” may be 40°C, 5×SSC, 5× The conditions of Denhardt solution, 0.5% SDS, 52% formamide; "high stringency conditions" can be 50°C, 5×SSC, 5×Denhardt solution, 0.5% SDS, 52% formamide. Those skilled in the art should understand that the higher the temperature, the more highly homologous polynucleotides can be obtained. In addition, those skilled in the art can select a comprehensive result formed by multiple factors such as temperature, probe concentration, probe length, ionic strength, time, and salt concentration that affect the stringency of hybridization to achieve the corresponding stringency.
除此之外可杂交的多核苷酸还示例性地可以为,通过FASTA、BLAST等 同一检索软件用系统设定的默认参数进行计算时,与编码SEQ ID NO:5的多核苷酸具有约70%或以上、71%或以上、72%或以上、73%或以上、74%或以上、75%或以上、76%或以上、77%或以上、78%或以上、79%或以上、80%或以上、81%或以上、82%或以上、83%或以上、84%或以上、85%或以上、86%或以上、87%或以上、88%或以上、89%或以上、90%或以上、91%或以上、92%或以上、93%或以上、94%或以上、95%或以上、96%或以上、97%或以上、98%或以上、99%或以上、99.1或以上、99.2或以上、99.3%或以上、99.4%或以上、99.5%或以上、99.6%或以上、99.7%或以上、99.8%或以上、或99.9%或以上同一性的多核苷酸。In addition, the hybridizable polynucleotide can also be exemplified by the same search software as FASTA, BLAST, etc., when calculated with default parameters set by the system, it has a value of about 70% with that of the polynucleotide encoding SEQ ID NO: 5. % Or more, 71% or more, 72% or more, 73% or more, 74% or more, 75% or more, 76% or more, 77% or more, 78% or more, 79% or more, 80 % Or more, 81% or more, 82% or more, 83% or more, 84% or more, 85% or more, 86% or more, 87% or more, 88% or more, 89% or more, 90 % Or more, 91% or more, 92% or more, 93% or more, 94% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99% or more, 99.1 Or more, 99.2 or more, 99.3% or more, 99.4% or more, 99.5% or more, 99.6% or more, 99.7% or more, 99.8% or more, or 99.9% or more identical polynucleotides.
核苷酸序列的同一性,可以使用Karlin及Altschul的算法规则BLAST(Proc.Natl.Acad.Sci.USA87:2264-2268,1990;Proc.Natl.Acad.Sci.USA90:5873,1993)来确定。基于BLAST算法规则的程序BLASTN、BLASTX已被开发(AltschulSF,etal:J Mol Biol 215:403,1990)。使用BLASTN分析碱基序列时,如使参数为score=100、wordlength=12;此外使用BLASTX分析氨基酸序列时,如使参数为score=50、wordlength=3;使用BLAST和Gapped BLAST程序时,采用各程序的系统可设定默认参数值。The identity of the nucleotide sequence can be determined using the algorithm rule BLAST of Karlin and Altschul (Proc.Natl.Acad.Sci.USA87:2264-2268,1990; Proc.Natl.Acad.Sci.USA90:5873,1993) . Programs BLASTN and BLASTX based on BLAST algorithm rules have been developed (AltschulSF, etal: J Mol Biol 215:403, 1990). When using BLASTN to analyze the base sequence, if the parameters are score=100, wordlength=12; in addition, when using BLASTX to analyze the amino acid sequence, if the parameters are score=50, wordlength=3; when using the BLAST and Gapped BLAST programs, use each The system of the program can set default parameter values.
可以使用本领域已知和可获得的各种成熟技术中的任何一种来制备、操作和/或表达多核苷酸。为了表达所希望的多肽或蛋白,可以将编码多肽的核苷酸序列插入合适的载体中。载体的实例是质粒、自主复制序列和转座元件。另外的示例性载体包括但不限于质粒、噬菌粒、粘粒、人工染色体(例如酵母人工染色体(YAC)、细菌人工染色体(BAC)或P1衍生的人工染色体(PAC))、噬菌体(例如λ噬菌体或M13噬菌体)和动物病毒。动物病毒载体的实例包括但不限于逆转录病毒(包括慢病毒)、腺病毒、腺相关病毒、疱疹病毒(例如单纯疱疹病毒)、痘病毒、杆状病毒、乳头瘤病毒和乳多空病毒(例如SV40)。表达载体的实例是用于在哺乳动物细胞中表达的pClneo载体(Promega);用于在哺乳动物细胞中进行慢病毒介导的基因转移和表达的Lenti4/V5-DESTTM、pLenti6/V5-DESTTM和pLenti6.2/V5-GW/lacZ(Invitrogen)。在特别的实施方式中,本文公开的嵌合蛋白的编码序列可以连接到用于在哺乳动物细胞中表达嵌合蛋白的这类表达载体中。存在于表达载体中的“控制元件”或“调节序列”是载体的非翻译区(例如复制起点、启动子、增强子、翻译起始信号(SD序列或Kozak序列)内含子、多腺苷酸化序列、 5′和3′非翻译区),其与宿主细胞蛋白相互作用以进行转录和翻译。这类元件或序列的强度和特异性可以不同。取决于所用的载体系统和宿主,可以使用任何数量的合适的转录和翻译元件或序列,包括广泛表达型启动子和诱导型启动子。Any of various mature techniques known and available in the art can be used to prepare, manipulate, and/or express polynucleotides. In order to express the desired polypeptide or protein, the nucleotide sequence encoding the polypeptide can be inserted into a suitable vector. Examples of vectors are plasmids, autonomously replicating sequences and transposable elements. Additional exemplary vectors include, but are not limited to, plasmids, phagemids, cosmids, artificial chromosomes (e.g. yeast artificial chromosomes (YAC), bacterial artificial chromosomes (BAC) or P1-derived artificial chromosomes (PAC)), bacteriophages (e.g. λ Phage or M13 phage) and animal viruses. Examples of animal virus vectors include, but are not limited to, retroviruses (including lentiviruses), adenoviruses, adeno-associated viruses, herpes viruses (e.g., herpes simplex virus), poxviruses, baculoviruses, papillomaviruses, and papillomaviruses ( For example SV40). Examples of expression vectors are the pClneo vector (Promega) for expression in mammalian cells; Lenti4/V5-DESTTM, pLenti6/V5-DESTTM, and Lenti4/V5-DESTTM for lentivirus-mediated gene transfer and expression in mammalian cells pLenti6.2/V5-GW/lacZ (Invitrogen). In a particular embodiment, the coding sequence of the chimeric protein disclosed herein can be linked to such an expression vector for expressing the chimeric protein in mammalian cells. The "control element" or "regulatory sequence" present in the expression vector is the untranslated region of the vector (such as the origin of replication, promoter, enhancer, translation initiation signal (SD sequence or Kozak sequence) intron, polyadenosine Acidified sequences, 5'and 3'untranslated regions), which interact with host cell proteins for transcription and translation. The strength and specificity of such elements or sequences can vary. Depending on the vector system and host used, any number of suitable transcription and translation elements or sequences can be used, including ubiquitous expression promoters and inducible promoters.
有关ADCAbout ADC
抗体-药物缀合物(Antibody-drug conjugate)(ADC)技术是靶导向技术,其允许选择性杀死或抑制癌细胞的生长或分裂。通常,ADC通过利用抗体靶向癌细胞和然后在细胞中释放毒性物质(即药物)而起作用,由此引发细胞死亡。由于ADC技术允许将药物准确地递送到靶癌细胞并在特定条件下释放,同时最小化对健康细胞的附带损伤,所以ADC技术增加了治疗性或靶向性抗体的功效并降低了不良反应的风险。Antibody-drug conjugate (ADC) technology is a target-directed technology that allows selective killing or inhibition of the growth or division of cancer cells. Generally, ADC works by using antibodies to target cancer cells and then release toxic substances (i.e. drugs) in the cells, thereby triggering cell death. Because ADC technology allows drugs to be accurately delivered to target cancer cells and released under specific conditions, while minimizing collateral damage to healthy cells, ADC technology increases the efficacy of therapeutic or targeted antibodies and reduces the risk of adverse reactions risk.
抗体-药物缀合物的基本结构可以是“抗体-接头-药物活性分子”或“抗体-药物活性分子”(无接头)。对于有接头的缀合物,所述接头允许药物对靶癌细胞展现效应,例如在与抗体分离(例如通过酶介导的水解)之后并在药物到达靶细胞之后。所述接头还通过连接所述抗体和药物起到功能性作用。所述抗体-药物缀合物的功效和毒性因而部分取决于所述接头的稳定性,因此,所述接头在药物安全性中起重要作用。The basic structure of the antibody-drug conjugate can be "antibody-linker-pharmaceutical active molecule" or "antibody-pharmaceutical active molecule" (no linker). For conjugates with a linker, the linker allows the drug to exhibit an effect on the target cancer cell, for example after separation from the antibody (e.g., by enzyme-mediated hydrolysis) and after the drug reaches the target cell. The linker also plays a functional role by connecting the antibody and the drug. The efficacy and toxicity of the antibody-drug conjugate thus depend in part on the stability of the linker, and therefore, the linker plays an important role in drug safety.
所述抗体-药物缀合物的接头可大致分为不可裂解的或可裂解的。许多不可裂解的接头利用硫醚连接到抗体上,所述硫醚包含抗体的半胱氨酸。侧缀的药物通常不能在体内与抗体分离,并且还可能发生功效降低。在广泛使用的硫醇-马来酰亚胺方法的情况下,抗体-药物缀合物是不稳定的,这可能导致药物在它到达靶细胞之前或之后从所述缀合物上分离。可裂解的接头可以为,例如,通过溶酶体酶水解。可裂解的接头可以包含二硫键,例如包括抗体的半胱氨酸。允许经由硫醇交换反应离解的二硫化物接头在某种程度上依靠将抗体-药缀合物摄取到靶细胞中并将所述二硫化物暴露于作为还原环境的胞质溶胶中。然而,因为血液中存在各种类型的硫醇(例如白蛋白和谷胱甘肽),所以药物可能在到达它的靶之前与抗体分离。The linkers of the antibody-drug conjugates can be roughly classified as non-cleavable or cleavable. Many non-cleavable linkers are attached to antibodies using thioethers, which contain the cysteine of the antibody. Pendant drugs usually cannot be separated from the antibody in vivo, and reduced efficacy may also occur. In the case of the widely used thiol-maleimide method, the antibody-drug conjugate is unstable, which may cause the drug to separate from the conjugate before or after it reaches the target cell. The cleavable linker can be, for example, hydrolyzed by a lysosomal enzyme. The cleavable linker may comprise a disulfide bond, for example including the cysteine of an antibody. The disulfide linker that is allowed to dissociate via the thiol exchange reaction relies to some extent on the uptake of the antibody-drug conjugate into the target cell and exposure of the disulfide to the cytosol as a reducing environment. However, because various types of thiols (such as albumin and glutathione) are present in the blood, the drug may be separated from the antibody before reaching its target.
为了代替在生理学细胞外条件中稳定性差的化学不稳定接头,例如腙和二硫化物类接头,存在对于在生理学细胞外条件下稳定的接头的需要。此外,存在对于具有高血浆稳定性以改善治疗适用性的接头的需要,因为 药物应当只释放到该药物所连接的蛋白质靶向的细胞内,而不是细胞之外。In order to replace chemically unstable linkers that are poorly stable under physiological extracellular conditions, such as hydrazone and disulfide-based linkers, there is a need for linkers that are stable under physiological extracellular conditions. In addition, there is a need for a linker with high plasma stability to improve therapeutic applicability, because the drug should only be released into the cell targeted by the protein to which the drug is attached, and not outside the cell.
现有文献已经报道了制备抗体-药物缀合物的新方法,例如,参见美国专利公布No.2012/0308584。进一步的改进是可能的。Existing documents have reported new methods for preparing antibody-drug conjugates, for example, see U.S. Patent Publication No. 2012/0308584. Further improvements are possible.
本发明的CAR或者本发明的抗体仍然可以在抗原结合域侧缀合药物活性分子,例如厄洛替尼、淋巴因子、肉毒毒素、亲和配体、放射性标记物、免疫调节化合物、抗癌剂、核酶等。The CAR of the present invention or the antibody of the present invention can still be conjugated with pharmacologically active molecules on the side of the antigen binding domain, such as erlotinib, lymphokines, botulinum toxin, affinity ligands, radiolabels, immunomodulatory compounds, anticancer Agents, ribozymes, etc.
载体Carrier
在特别的实施方式中,用编码CAR的逆转录病毒载体(例如慢病毒载体)转导细胞(例如,免疫效应细胞,例如T细胞)。例如,用编码CAR的载体转导免疫效应细胞,所述载体包含结合BCMA多肽的人源化抗BCMA抗体或抗原结合片段,所述人源化抗BCMA抗体或抗原结合片段具有跨膜域和胞内信号传导域,使得这些经转导的细胞可以引发CAR介导的细胞毒性反应。In a particular embodiment, a retroviral vector (e.g., a lentiviral vector) encoding a CAR is used to transduce cells (e.g., immune effector cells, such as T cells). For example, a carrier encoding CAR is used to transduce immune effector cells, the carrier comprising a humanized anti-BCMA antibody or antigen-binding fragment that binds to a BCMA polypeptide, and the humanized anti-BCMA antibody or antigen-binding fragment has a transmembrane domain and a cell. The internal signaling domain allows these transduced cells to trigger CAR-mediated cytotoxicity.
逆转录病毒是基因传递的常用工具。在特别的实施方式中,逆转录病毒用于将编码嵌合抗原受体(CAR)的多核苷酸递送至细胞。如本文所用,术语“逆转录病毒”是指一种RNA病毒,其逆转录其基因组RNA为线性双链DNA拷贝,随后将其基因组DNA共价整合到宿主基因组中。一旦病毒被整合到宿主基因组中,它就被称为“原病毒”。原病毒作为RNA聚合酶II的模板,并指导RNA分子的表达,所述RNA分子编码产生新病毒颗粒所需的结构蛋白和酶。Retroviruses are a common tool for gene delivery. In a particular embodiment, retroviruses are used to deliver polynucleotides encoding chimeric antigen receptors (CAR) to cells. As used herein, the term "retrovirus" refers to an RNA virus that reverse transcribes its genomic RNA into a linear double-stranded DNA copy, and then covalently integrates its genomic DNA into the host genome. Once the virus is integrated into the host genome, it is called a "protovirus." The provirus serves as a template for RNA polymerase II and directs the expression of RNA molecules that encode structural proteins and enzymes required to produce new viral particles.
适用于特别的实施方式的示例性逆转录病毒包括但不限于:莫洛尼鼠白血病病毒(M-MuLV)、莫洛尼鼠肉瘤病毒(MoMSV)、哈维鼠肉瘤病毒(HaMuSV)、鼠乳腺肿瘤病毒(MuMTV)、长臂猿白血病病毒(GaLV)、猫白血病病毒(FLV)、鼠干细胞病毒(MSCV)和劳斯氏肉瘤病毒(RSV))和慢病毒。Exemplary retroviruses suitable for specific embodiments include, but are not limited to: Moloney Murine Leukemia Virus (M-MuLV), Moloney Murine Sarcoma Virus (MoMSV), Harvey Murine Sarcoma Virus (HaMuSV), Murine Mammary Gland Tumor virus (MuMTV), gibbon leukemia virus (GaLV), feline leukemia virus (FLV), murine stem cell virus (MSCV) and Rouss sarcoma virus (RSV)) and lentivirus.
如本文所用,术语“慢病毒”是指包含很多逆转录病毒的组(或属)。示例性慢病毒包括但不限于:HIV(人免疫缺陷病毒;包括HIV 1型和HIV 2型);维斯那-梅迪病毒(visna-maedivirus,VMV)病毒;山羊关节炎-脑炎病毒(CAEV);马传染性贫血病毒(EIAV);猫免疫缺陷病毒(FIV);牛免疫缺陷病毒(BIV);和猿猴免疫缺陷病毒(SIV)。在一种 实施方式中,基于HIV的载体骨架(即HIV顺式作用序列元件)是优选的。在特别的实施方式中,慢病毒用于将包含CAR的多核苷酸递送至细胞。As used herein, the term "lentivirus" refers to a group (or genus) containing many retroviruses. Exemplary lentiviruses include but are not limited to: HIV (human immunodeficiency virus; including HIV type 1 and HIV type 2); visna-maedivirus (visna-maedivirus, VMV) virus; goat arthritis-encephalitis virus ( CAEV); Equine Infectious Anemia Virus (EIAV); Feline Immunodeficiency Virus (FIV); Bovine Immunodeficiency Virus (BIV); and Simian Immunodeficiency Virus (SIV). In one embodiment, an HIV-based vector backbone (i.e., HIV cis-acting sequence elements) is preferred. In a particular embodiment, lentiviruses are used to deliver CAR-containing polynucleotides to cells.
术语“载体”在本文中用于指能够转移或转运另一种核酸分子的核酸分子。转移的核酸通常与载体核酸分子连接,例如插入载体核酸分子中。载体可以包括指导细胞中自主复制的序列,或者可以包括足以允许整合到宿主细胞DNA中的序列。有用的载体包括,例如,质粒(例如DNA质粒或RNA质粒)、转座子、粘粒、细菌人工染色体和病毒载体。有用的病毒载体包括例如复制缺陷型逆转录病毒和慢病毒。The term "vector" is used herein to refer to a nucleic acid molecule capable of transferring or transporting another nucleic acid molecule. The transferred nucleic acid is usually linked to the carrier nucleic acid molecule, for example inserted into the carrier nucleic acid molecule. The vector may include sequences that direct autonomous replication in the cell, or may include sequences sufficient to allow integration into the host cell's DNA. Useful vectors include, for example, plasmids (such as DNA plasmids or RNA plasmids), transposons, cosmids, bacterial artificial chromosomes, and viral vectors. Useful viral vectors include, for example, replication-defective retroviruses and lentiviruses.
对于本领域技术人员显而易见的是,术语“病毒载体”广泛用于指核酸分子(例如转移质粒)或介导核酸转移的病毒颗粒,核酸分子包括病毒衍生的通常促进核酸分子转移或整合到细胞基因组中的核酸元件。病毒颗粒通常包括各种病毒组件,有时还包括除核酸外的宿主细胞组件。It is obvious to those skilled in the art that the term "viral vector" is widely used to refer to nucleic acid molecules (such as transfer plasmids) or viral particles that mediate nucleic acid transfer. Nucleic acid molecules include virus-derived ones that generally promote the transfer or integration of nucleic acid molecules into the cell genome. Nucleic acid elements in. Virus particles usually include various viral components, and sometimes host cell components other than nucleic acids.
术语病毒载体可以指能够将核酸转移到细胞中的病毒或病毒颗粒,或被转移的核酸本身。病毒载体和转移质粒含有主要衍生自病毒的结构和/或功能遗传元件。术语“逆转录病毒载体”是指主要来源于逆转录病毒的含有结构和功能遗传元件或其部分的病毒载体或质粒。术语“慢病毒”指的是逆转录病毒科的属,其能够有效感染非周期性和有丝分裂后的细胞;它们可传递显著量的遗传信息进入宿主细胞的DNA,以便它们是基因传递载体的最有效的方法之一。The term viral vector may refer to a virus or viral particle capable of transferring nucleic acid into a cell, or the transferred nucleic acid itself. Viral vectors and transfer plasmids contain structural and/or functional genetic elements mainly derived from viruses. The term "retroviral vector" refers to a viral vector or plasmid containing structural and functional genetic elements or parts thereof mainly derived from retroviruses. The term "lentivirus" refers to the genus of the Retroviridae family, which can effectively infect acyclic and post-mitotic cells; they can transmit a significant amount of genetic information into the host cell's DNA, so that they are the best gene delivery vector. One of the effective methods.
因此,在优选实施方式中,本发明涉及用编码CAR的表达载体转染细胞的方法。例如,在一些实施方式中,载体包含额外的序列,例如促进CAR表达的序列,例如启动子、增强子、poly-A信号和/或一个或多个内含子。在优选的实施方式中,CAR编码序列的侧翼是转座子序列,使得存在转座酶以允许编码序列整合到转染细胞的基因组中。Therefore, in a preferred embodiment, the present invention relates to a method of transfecting cells with an expression vector encoding CAR. For example, in some embodiments, the vector contains additional sequences, such as sequences that promote CAR expression, such as promoters, enhancers, poly-A signals, and/or one or more introns. In a preferred embodiment, the CAR coding sequence is flanked by a transposon sequence so that a transposase is present to allow the coding sequence to be integrated into the genome of the transfected cell.
在一些实施方式中,用转座酶进一步转染遗传转化的细胞,所述转座酶促进CAR编码序列整合到转染细胞的基因组中。在一些实施方式中,转座酶作为DNA表达载体提供。然而,在优选的实施方式中,转座酶作为可表达的RNA或蛋白质提供,使得转座酶不在转基因细胞中发生长期表达。例如,在一些实施方式中,转座酶作为mRNA提供(例如,包含帽和poly-A尾的mRNA)。可以根据本发明的实施方式使用任何转座酶系统。然而,在一些实施方式中,转座酶是鲑鱼型Tel样转座酶(SB)。 在一些实施方式中,转座酶是具有增加的酶活性的工程化酶。转座酶的一些具体实例包括但不限于SB 10、SB 11或SB 100X转座酶(参见,例如,Mates等人,2009,Nat Genet.41(6):753-61或US9228180,其通过引用并入本文)。例如,方法可以包括对具有编码SB 10、SB 11或SB 100X转座酶的mRNA的细胞进行电穿孔。In some embodiments, the genetically transformed cell is further transfected with a transposase that promotes the integration of the CAR coding sequence into the genome of the transfected cell. In some embodiments, the transposase is provided as a DNA expression vector. However, in a preferred embodiment, the transposase is provided as expressible RNA or protein, so that the transposase does not undergo long-term expression in the transgenic cells. For example, in some embodiments, the transposase is provided as mRNA (e.g., mRNA comprising a cap and a poly-A tail). Any transposase system can be used according to embodiments of the present invention. However, in some embodiments, the transposase is a salmon-type Tel-like transposase (SB). In some embodiments, the transposase is an engineered enzyme with increased enzyme activity. Some specific examples of transposase include, but are not limited to, SB 10, SB 11, or SB 100X transposase (see, for example, Mates et al., 2009, Nat Genet. 41(6): 753-61 or US9228180, which is incorporated by reference Incorporated into this article). For example, the method may include electroporating cells with mRNA encoding SB 10, SB 11, or SB 100X transposase.
序列变体:Sequence variants:
所要求保护的核酸、蛋白质、抗体、抗体片段和/或CAR的序列变体(例如由百分比序列同一性限定的那些)也包括在本发明的范围内,其维持本发明的类似结合特性。这些变体显示了替代序列,但保持基本相同的结合特性例如靶特异性,因为所提供的特定序列已知是功能类似物或功能上的类似物。序列同一性涉及进行序列比对时相同核苷酸或氨基酸的百分比。The claimed nucleic acid, protein, antibody, antibody fragment and/or CAR sequence variants (such as those defined by percent sequence identity) are also included within the scope of the present invention, which maintain similar binding properties of the present invention. These variants display alternative sequences, but retain substantially the same binding properties such as target specificity, because the specific sequences provided are known to be functional analogs or functional analogs. Sequence identity relates to the percentage of identical nucleotides or amino acids when the sequence is aligned.
本文所用的叙述“序列同一性”是指在比较窗口上基于核苷酸-核苷酸或基于氨基酸-氨基酸的序列相同的程度。因此,可以通过以下来计算“序列同一性的百分比”:在比较窗口上比较两个最佳比对序列,确定两个序列上存在相同核酸碱基(例如A、T、C、G、I)或相同氨基酸残基(例如,Ala、Pro、Ser、Thr、Gly、Val、Leu、He、Phe、Tyr、Trp、Lys、Arg、His、Asp、Glu、Asn、Gln、Cys和Met)的位置的数量来产生匹配位置的数量,将匹配位置的数量除以比较窗口中位置的总数量(即窗口大小),以及将结果乘以100以得到序列同一性的百分比。包括了具有与本文所述的任何参考序列至少约50%,55%,60%,65%,70%,75%,80%,85%,90%,95%,96%,97%,98%,99%或100%的序列同一性的核苷酸或多肽,通常其中多肽变体保持参考多肽的至少一种生物学活性。The term "sequence identity" as used herein refers to the degree of nucleotide-nucleotide or amino acid-amino acid based sequence identity in the comparison window. Therefore, the “percentage of sequence identity” can be calculated by the following: compare the two best aligned sequences on the comparison window, and determine the presence of the same nucleic acid base (such as A, T, C, G, I) on the two sequences Or the position of the same amino acid residue (e.g., Ala, Pro, Ser, Thr, Gly, Val, Leu, He, Phe, Tyr, Trp, Lys, Arg, His, Asp, Glu, Asn, Gln, Cys and Met) To generate the number of matching positions, divide the number of matching positions by the total number of positions in the comparison window (ie, the window size), and multiply the result by 100 to get the percentage of sequence identity. It includes at least about 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90%, 95%, 96%, 97%, 98 %, 99% or 100% sequence identity of nucleotides or polypeptides, usually wherein the polypeptide variant retains at least one biological activity of the reference polypeptide.
本领域普通技术人员将理解,由于遗传密码的简并性,存在许多编码如本文所述的多肽或蛋白的核苷酸序列。这些多核苷酸中的一些与任何天然基因的核苷酸序列具有最小的同源性或序列同一性。尽管如此,本发明特别考虑了由于密码子使用的差异而变化的多核苷酸。落入所述序列同一性的序列中的缺失、替换和其他变化也包括在本发明中。Those of ordinary skill in the art will understand that due to the degeneracy of the genetic code, there are many nucleotide sequences encoding polypeptides or proteins as described herein. Some of these polynucleotides have minimal homology or sequence identity with the nucleotide sequence of any natural gene. Nevertheless, the present invention specifically considers polynucleotides that vary due to differences in codon usage. Deletions, substitutions and other changes in the sequence that fall into the sequence identity are also included in the present invention.
可通过替换发生的蛋白质序列修饰也包括在本发明的范围内。如本文所定义的替换是对蛋白质的氨基酸序列进行的修饰,借此,一个或多 个氨基酸被相同数量的(不同的)氨基酸替换,从而产生含有与初级蛋白质不同的氨基酸序列的蛋白质。可以进行替换,其优选不显著改变蛋白质的功能。与添加一样,替换可以是天然的或人工的。本领域熟知的是,可以在不显著改变蛋白质功能的情况下进行氨基酸替换。当修饰涉及用一种氨基酸替换另一种具有相似性质的氨基酸的“保守性”氨基酸替换时,尤其如此。这类“保守性的”氨基酸可以是天然或合成的氨基酸,其由于大小、电荷、极性和构象而可被替换但不会显著影响蛋白质的结构和功能。通常,许多氨基酸可被保守性氨基酸替换而不会有害地影响蛋白质的功能。Modifications of protein sequences that can occur by substitution are also included within the scope of the present invention. A substitution as defined herein is a modification of the amino acid sequence of a protein, whereby one or more amino acids are replaced by the same number of (different) amino acids, resulting in a protein containing an amino acid sequence different from that of the primary protein. Substitutions can be made, which preferably do not significantly change the function of the protein. Like addition, replacement can be natural or artificial. It is well known in the art that amino acid substitutions can be made without significantly changing the function of the protein. This is especially true when the modification involves a "conservative" amino acid substitution that replaces one amino acid with another amino acid of similar properties. Such "conservative" amino acids can be natural or synthetic amino acids, which can be replaced due to size, charge, polarity, and conformation, but do not significantly affect the structure and function of the protein. Generally, many amino acids can be replaced by conservative amino acids without adversely affecting the function of the protein.
一般来说,非极性氨基酸Gly、Ala、Val、Ile和Leu;非极性芳香族氨基酸Phe、Trp和Tyr;中性极性氨基酸Ser、Thr、Cys、Gln、Asn和Met;带正电荷的氨基酸Lys、Arg和His;带负电荷的氨基酸Asp和Glu代表保守性氨基酸组。这份清单并非穷举。例如,熟知的是,Ala、Gly、Ser和有时Cys可以相互替代,即使它们属于不同的组。Generally speaking, non-polar amino acids Gly, Ala, Val, Ile and Leu; non-polar aromatic amino acids Phe, Trp and Tyr; neutral polar amino acids Ser, Thr, Cys, Gln, Asn and Met; positively charged The amino acids Lys, Arg and His; the negatively charged amino acids Asp and Glu represent the conservative amino acid group. This list is not exhaustive. For example, it is well known that Ala, Gly, Ser, and sometimes Cys can be substituted for each other, even if they belong to different groups.
替代变体在抗体分子中除去至少一个氨基酸残基,并在其位置上插入不同的残基。对于替代诱变的发生,最感兴趣的位置包括高变区,但也考虑了FR改变。如果这样的替代导致生物活性的变化,则可以引入更大量的改变,并筛选产物。Substitution variants remove at least one amino acid residue in the antibody molecule and insert a different residue in its position. For the occurrence of alternative mutagenesis, the most interesting locations include the hypervariable region, but the FR changes are also considered. If such a substitution results in a change in biological activity, then a larger number of changes can be introduced and the product screened.
基因修饰基因细胞和免疫细胞Genetically modified gene cells and immune cells
在特别的实施方式中,本发明考虑遗传修饰以表达本发明的CAR的细胞,以用于治疗B细胞相关病症。如本文所用,术语“经遗传改造的”或“经遗传修饰的”是指将DNA或RNA形式的另外的遗传物质添加到细胞中的总遗传物质中。术语“经遗传修饰的细胞”、“经修饰的细胞”和“重定向的细胞”可互换使用。如本文所用,术语“基因疗法”是指将DNA或RNA形式的另外的遗传物质引入细胞中的总遗传物质中,其恢复、修正或修饰基因的表达,或用于表达治疗性多肽(例如CAR或ADC)。在特别的实施方式中,本发明的CAR被引入免疫效应细胞并在免疫效应细胞中表达,以便重定向它们对感兴趣的靶抗原、例如BCMA多肽的特异性。In a particular embodiment, the present invention considers cells genetically modified to express the CAR of the present invention for the treatment of B cell related disorders. As used herein, the term "genetically engineered" or "genetically modified" refers to the addition of additional genetic material in the form of DNA or RNA to the total genetic material in a cell. The terms "genetically modified cell", "modified cell" and "redirected cell" are used interchangeably. As used herein, the term "gene therapy" refers to the introduction of additional genetic material in the form of DNA or RNA into the total genetic material in a cell, which restores, corrects or modifies gene expression, or is used to express therapeutic polypeptides (such as CAR Or ADC). In a particular embodiment, the CAR of the present invention is introduced into immune effector cells and expressed in immune effector cells in order to redirect their specificity for the target antigen of interest, such as the BCMA polypeptide.
“免疫细胞”或“免疫效应细胞”是免疫系统的任何细胞,其具有一种或多种效应功能(例如,细胞毒性细胞杀伤活性、细胞因子分泌、ADCC和/或CDC的诱导)。"Immune cell" or "immune effector cell" is any cell of the immune system that has one or more effector functions (for example, cytotoxic cell killing activity, cytokine secretion, ADCC and/or CDC induction).
本发明的免疫效应细胞可以是自体或非自体的(“非自己的”,例如同种异体的、同基因的或异基因的)。如本文所用,“自体的”是指来自相同受试者的细胞,其是本发明的优选实施方式。如本文所用,“同种异体的”是指与受试者或患者相同的物种但在遗传上不同的细胞。如本文所用,“同基因的”是指在遗传上相同但来自不同受试者的细胞。如本文所用,“异基因的”是指来自不同物种的细胞。在优选的实施方式中,本发明的细胞是自体的或同种异体的。The immune effector cells of the present invention may be autologous or non-autologous ("non-self", such as allogeneic, syngeneic or allogeneic). As used herein, "autologous" refers to cells from the same subject, which is a preferred embodiment of the present invention. As used herein, "allogeneic" refers to cells of the same species as the subject or patient but genetically different. As used herein, "syngeneic" refers to cells that are genetically identical but come from different subjects. As used herein, "allogeneic" refers to cells from different species. In a preferred embodiment, the cells of the invention are autologous or allogeneic.
与本发明的CAR一起使用的示例性免疫效应细胞包括T淋巴细胞。术语“T细胞”或“T淋巴细胞”是本领域公认的并且旨在包括胸腺细胞、未成熟T淋巴细胞、成熟T淋巴细胞、静息T淋巴细胞、细胞因子诱导的杀伤细胞(CIK细胞)或活化的T淋巴细胞。细胞因子诱导的杀伤(CIK)细胞通常是CD3-和CD56-阳性的非主要组织相容性复合物(MHC),其是限制性的自然杀伤(NK)样T淋巴细胞。T细胞可以是T辅助细胞(Th),例如T辅助细胞1(Th1)或T辅助细胞2(Th2)。T细胞可以是辅助T细胞或细胞毒性T细胞或任何其他T细胞亚群。适用于特别的实施方式的其他示例性T细胞群包括初始T细胞和记忆T细胞。Exemplary immune effector cells used with the CAR of the present invention include T lymphocytes. The term "T cell" or "T lymphocyte" is recognized in the art and is intended to include thymocytes, immature T lymphocytes, mature T lymphocytes, resting T lymphocytes, cytokine-induced killer cells (CIK cells) Or activated T lymphocytes. Cytokine-induced killer (CIK) cells are usually CD3- and CD56-positive non-major histocompatibility complex (MHC), which are restricted natural killer (NK)-like T lymphocytes. The T cell may be a T helper cell (Th), such as T helper cell 1 (Th1) or T helper cell 2 (Th2). The T cell may be a helper T cell or a cytotoxic T cell or any other T cell subpopulation. Other exemplary T cell populations suitable for particular embodiments include naive T cells and memory T cells.
例如,当在自体细胞移植后重新引入回患者时,用本文所述的本发明的CAR修饰的T细胞可识别并杀死肿瘤细胞。与其他T细胞相比,CIK细胞可具有增强的细胞毒活性,因此其代表本发明免疫细胞的优选实施方式。For example, when reintroduced back into the patient after autologous cell transplantation, T cells modified with the CAR of the present invention described herein can recognize and kill tumor cells. Compared with other T cells, CIK cells may have enhanced cytotoxic activity, so they represent a preferred embodiment of the immune cells of the present invention.
如技术人员所理解的,其他细胞也可以用作具有本文所述的CAR的免疫效应细胞。特别地,免疫效应细胞还包括NK细胞、NKT细胞、嗜中性粒细胞和巨噬细胞。免疫效应细胞还包括效应细胞的祖细胞,其中可以在体内或体外诱导这类祖细胞分化成免疫效应细胞。As the skilled person understands, other cells can also be used as immune effector cells with the CAR described herein. In particular, immune effector cells also include NK cells, NKT cells, neutrophils and macrophages. Immune effector cells also include effector cell progenitor cells, where such progenitor cells can be induced to differentiate into immune effector cells in vivo or in vitro.
本发明提供了制备表达本发明的CAR的免疫效应细胞的方法。在一种实施方式中,该方法包括转染或转导从个体分离的免疫效应细胞,使得免疫效应细胞表达如本文所述的一种或多种CAR。在某些实施方式中,免疫效应细胞从个体分离并经遗传修饰而无需在体外进一步操作。 然后可以将这些细胞直接再次施用于个体。在进一步的实施方式中,首先活化免疫效应细胞并刺激其在体外增殖,然后将其进行遗传修饰以表达CAR。在这方面,免疫效应细胞可以在遗传修饰(即转导或转染以表达本发明的CAR)之前和/或之后培养。The present invention provides a method for preparing immune effector cells expressing the CAR of the present invention. In one embodiment, the method includes transfection or transduction of immune effector cells isolated from the individual so that the immune effector cells express one or more CARs as described herein. In certain embodiments, immune effector cells are isolated from the individual and genetically modified without further manipulation in vitro. These cells can then be re-administered directly to the individual. In a further embodiment, the immune effector cells are first activated and stimulated to proliferate in vitro, and then genetically modified to express CAR. In this regard, immune effector cells can be cultured before and/or after genetic modification (ie, transduction or transfection to express the CAR of the invention).
在特别的实施方式中,在本文所述的免疫效应细胞的体外操作或遗传修饰之前,从受试者获得细胞来源。在特别的实施方式中,CAR修饰的免疫效应细胞包含T细胞。T细胞可以从许多来源获得,包括但不限于外周血单核细胞、骨髓、淋巴结组织、脐带血、胸腺组织、来自感染部位的组织、腹水、胸腔积液、脾组织和肿瘤。在某些实施方式中,T细胞可以使用本领域技术人员已知的任何技术或技术的组合,例如通过沉降和基于抗体缀合珠的方法,从受试者采集的血液单位获得。在一种实施方式中,通过成分血采集术获得来自个体循环血液的细胞。成分血产物通常含有淋巴细胞,包括T细胞、单核细胞、粒细胞、B细胞、其他有核白细胞、红细胞和血小板。在一种实施方式中,可以洗涤通过成分血采集而收集的细胞以除去血浆部分并将细胞置于合适的缓冲液或培养基中用于后续处理。可以用PBS或另一种合适的不含钙、镁和大多数二价阳离子的溶液洗涤细胞。如本领域普通技术人员所理解的,洗涤步骤可以通过本领域技术人员已知的方法完成,例如通过使用半自动流通式离心机(例如Cobe2991细胞处理器、Baxter CytoMate等)进行。洗涤后,可将细胞重悬于各种生物相容性缓冲液或具有或不具有缓冲液的其他盐水溶液中。在某些实施方式中,可以在直接重悬于培养基的细胞中除去成分采血样品的不希望的组分。In a particular embodiment, prior to the in vitro manipulation or genetic modification of the immune effector cells described herein, a source of cells is obtained from the subject. In a particular embodiment, the CAR-modified immune effector cells comprise T cells. T cells can be obtained from many sources, including but not limited to peripheral blood mononuclear cells, bone marrow, lymph node tissue, cord blood, thymus tissue, tissue from the site of infection, ascites, pleural effusion, spleen tissue, and tumors. In certain embodiments, T cells can be obtained from blood units collected from a subject using any technique or combination of techniques known to those skilled in the art, for example, by sedimentation and antibody-conjugated bead-based methods. In one embodiment, cells from the circulating blood of an individual are obtained by a blood aspiration technique. Blood components usually contain lymphocytes, including T cells, monocytes, granulocytes, B cells, other nucleated white blood cells, red blood cells, and platelets. In one embodiment, the cells collected by blood aspiration collection can be washed to remove the plasma fraction and placed in a suitable buffer or medium for subsequent processing. The cells can be washed with PBS or another suitable solution that does not contain calcium, magnesium and most divalent cations. As understood by those of ordinary skill in the art, the washing step can be performed by methods known to those skilled in the art, for example, by using a semi-automatic flow-through centrifuge (such as Cobe2991 cell processor, Baxter CytoMate, etc.). After washing, the cells can be resuspended in various biocompatible buffers or other saline solutions with or without buffers. In certain embodiments, undesired components of the blood sample can be removed from the cells directly resuspended in the culture medium.
在某些实施方式中,通过裂解红细胞和耗尽单核细胞(例如通过PERCOLLTM梯度离心),从外周血单核细胞(PBMC)分离T细胞。可以通过正或负选择技术进一步分离特定的T细胞亚群。可以使用的一种方法是通过使用单克隆抗体混合物的负磁免疫粘附或流式细胞术进行细胞分选和/或选择,所述单克隆抗体混合物针对于负选择的细胞上存在的细胞表面标志物。In certain embodiments, T cells are separated from peripheral blood mononuclear cells (PBMC) by lysing red blood cells and depleting monocytes (eg, by PERCOLLTM gradient centrifugation). Specific T cell subpopulations can be further separated by positive or negative selection techniques. One method that can be used is cell sorting and/or selection by negative magnetic immunoadhesion or flow cytometry using a mixture of monoclonal antibodies directed against the cell surface present on the negatively selected cells. landmark.
可以使用本发明的方法直接遗传修饰PBMC以表达CAR。在某些实施方式中,在分离PBMC后,进一步分离T淋巴细胞,并且在某些实施方式中,细胞毒性和辅助T淋巴细胞可以在遗传修饰和/或扩增之前或 之后分选为初始、记忆和效应T细胞亚群。CD8+细胞可以通过使用标准方法获得。在一些实施方式中,通过鉴定与这些类型的CD8+细胞中的每一种相关的细胞表面抗原,将CD8+细胞进一步分选为初始、中枢记忆和效应细胞。The method of the present invention can be used to directly genetically modify PBMC to express CAR. In some embodiments, after the isolation of PBMC, T lymphocytes are further separated, and in some embodiments, cytotoxic and helper T lymphocytes can be sorted as initial, cytotoxic and helper T lymphocytes before or after genetic modification and/or amplification. Memory and effector T cell subsets. CD8+ cells can be obtained by using standard methods. In some embodiments, CD8+ cells are further sorted into naive, central memory, and effector cells by identifying cell surface antigens associated with each of these types of CD8+ cells.
免疫效应细胞(例如T细胞)可以在使用已知方法分离后进行遗传修饰,或者免疫效应细胞可以在进行遗传修饰之前在体外活化和扩增(或在祖细胞的情况下分化)。在特别的实施方式中,免疫效应细胞(例如T细胞)用本发明的嵌合抗原受体进行遗传修饰(例如,用包含编码CAR的核酸的病毒载体转导),然后在体外活化和扩增。在各种实施方式中,可以使用例如美国专利第5,858,358号;第6,905,681号;第7,067,318号;第7,232,566号;第5,883,223号;第6,797,514号和第6,867,041号中所述的方法,在经遗传修饰以表达CAR之前或之后激活和扩增T细胞。Immune effector cells (eg T cells) can be genetically modified after isolation using known methods, or immune effector cells can be activated and expanded in vitro (or differentiated in the case of progenitor cells) before genetic modification. In a particular embodiment, immune effector cells (such as T cells) are genetically modified with the chimeric antigen receptor of the present invention (for example, transduced with a viral vector containing a nucleic acid encoding a CAR), and then activated and amplified in vitro . In various embodiments, for example, the methods described in U.S. Patent Nos. 5,858,358; 6,905,681; 7,067,318; 7,232,566; 5,883,223; T cells are activated and expanded before or after expression of CAR.
在另一种实施方式中,例如,一种,两种,三种,四种,五种或更多种不同表达载体的混合物可以用于遗传修饰免疫效应细胞的供体群,其中每种载体编码如本发明的不同的嵌合抗原受体蛋白质(例如CAR变体序列)。得到的修饰的免疫效应细胞形成修饰细胞的混合群,其中一部分修饰细胞表达多于一种的不同CAR蛋白。In another embodiment, for example, a mixture of one, two, three, four, five or more different expression vectors can be used to genetically modify the donor population of immune effector cells, wherein each vector Encoding different chimeric antigen receptor proteins of the present invention (e.g., CAR variant sequence). The resulting modified immune effector cells form a mixed population of modified cells, some of which express more than one different CAR protein.
在一种实施方式中,本发明提供了一种储存靶向BCMA蛋白的表达经遗传修饰的鼠、人或人源化CAR蛋白的免疫效应细胞的方法,包括冷冻保存免疫效应细胞,使得细胞在解冻时保持存活。一部分表达CAR蛋白的免疫效应细胞可以通过本领域已知的方法冷冻保存,以提供这种细胞的永久来源,用于将来治疗患有B细胞相关病症的患者。需要时,可以使冷冻保存的转化免疫效应细胞解冻、生长和扩增以获得更多这样的细胞。In one embodiment, the present invention provides a method for storing immune effector cells expressing genetically modified mouse, human, or humanized CAR protein targeting BCMA protein, which includes cryopreserving the immune effector cells so that the cells are in Stay alive when thawed. A part of the immune effector cells expressing CAR protein can be cryopreserved by methods known in the art to provide a permanent source of such cells for future treatment of patients with B-cell-related disorders. When needed, cryopreserved transformed immune effector cells can be thawed, grown and expanded to obtain more such cells.
组合物和制剂Composition and formulation
本发明的组合物可包含如本文所考虑的一种或多种多肽、多核苷酸、包含该多核苷酸的载体、经遗传修饰的免疫效应细胞等。组合物包括但不限于药物组合物。“药物组合物”是指在药学上可接受的或生理学上可接受的溶液中配制的组合物,其单独或与一种或多种其他治疗方式组合施用于细胞或动物。还应理解,如果需要,本发明的组合物也可 以与其他药剂组合施用,例如细胞因子、生长因子、激素、小分子、化学治疗剂、前药、药物、抗体或其他各种药物活性剂。对组合物中还可包含的其它组分实际上没有限制,条件是额外的组分不会不利地影响组合物递送预期疗法的能力。The composition of the present invention may comprise one or more polypeptides, polynucleotides, vectors comprising the polynucleotides, genetically modified immune effector cells, etc. as considered herein. Compositions include, but are not limited to, pharmaceutical compositions. "Pharmaceutical composition" refers to a composition formulated in a pharmaceutically acceptable or physiologically acceptable solution, which is administered to cells or animals alone or in combination with one or more other treatment modalities. It should also be understood that, if desired, the composition of the present invention can also be administered in combination with other agents, such as cytokines, growth factors, hormones, small molecules, chemotherapeutic agents, prodrugs, drugs, antibodies or other various pharmaceutically active agents. There are virtually no restrictions on the other components that may also be included in the composition, provided that the additional components do not adversely affect the ability of the composition to deliver the intended therapy.
术语“药学上可接受的”在本文中用于指在合理的医学判断范围内适合用于与人类和动物的组织接触而没有过量毒性、刺激、过敏反应或其他问题或并发症并且与合理的利益/风险比相称的那些化合物、材料、组合物和/或剂型。The term "pharmaceutically acceptable" is used herein to refer to being suitable for use in contact with human and animal tissues within the scope of reasonable medical judgment without excessive toxicity, irritation, allergic reactions or other problems or complications and with reasonable Those compounds, materials, compositions and/or dosage forms that have a commensurate benefit/risk ratio.
如本文所用,“药学上可接受的载体、稀释剂或赋形剂”包括但不限于已经由美国食品和药品管理局或中国食品药品监督管理局批准可用于人或家畜的任何佐剂、载体、赋形剂、助流剂、甜味剂、稀释剂、防腐剂、染料/着色剂、增味剂、表面活性剂、润湿剂、分散剂、悬浮剂、稳定剂、等渗剂、溶剂、表面活性剂或乳化剂。示例性的药学上可接受的载体包括但不限于糖,例如乳糖、葡萄糖和蔗糖;淀粉,例如玉米淀粉和马铃薯淀粉;纤维素及其衍生物,例如羧甲基纤维素钠、乙基纤维素和醋酸纤维素;黄芪胶;麦芽;明胶;滑石;可可脂,蜡,动植物油脂,石蜡,有机硅,膨润土,硅酸,氧化锌;油,例如花生油、棉籽油、红花油、芝麻油、橄榄油、玉米油和豆油;二醇,例如丙二醇;多元醇,例如甘油、山梨糖醇、甘露醇和聚乙二醇;酯类,例如油酸乙酯和月桂酸乙酯;琼脂;缓冲剂,例如氢氧化镁和氢氧化铝;海藻酸;无热原水;等渗盐水;林格氏溶液;乙醇;磷酸盐缓冲液;以及药物制剂中使用的任何其他相容性物质。As used herein, "pharmaceutically acceptable carriers, diluents or excipients" include but are not limited to any adjuvants and carriers that have been approved by the US Food and Drug Administration or China Food and Drug Administration for use in humans or livestock , Excipients, glidants, sweeteners, diluents, preservatives, dyes/colorants, flavor enhancers, surfactants, wetting agents, dispersants, suspending agents, stabilizers, isotonic agents, solvents , Surfactant or emulsifier. Exemplary pharmaceutically acceptable carriers include, but are not limited to, sugars, such as lactose, glucose, and sucrose; starches, such as corn starch and potato starch; cellulose and derivatives thereof, such as sodium carboxymethyl cellulose, ethyl cellulose And cellulose acetate; tragacanth; malt; gelatin; talc; cocoa butter, wax, animal and vegetable fats, paraffin, silicone, bentonite, silicic acid, zinc oxide; oils, such as peanut oil, cottonseed oil, safflower oil, sesame oil, Olive oil, corn oil, and soybean oil; glycols, such as propylene glycol; polyols, such as glycerol, sorbitol, mannitol, and polyethylene glycol; esters, such as ethyl oleate and ethyl laurate; agar; buffers, For example, magnesium hydroxide and aluminum hydroxide; alginic acid; pyrogen-free water; isotonic saline; Ringer's solution; ethanol; phosphate buffer; and any other compatible substances used in pharmaceutical preparations.
在特别的实施方式中,本发明的组合物包含一定量的本发明的表达CAR的免疫效应细胞。如本文所用,术语“量”是指实现有益或所希望的预防或治疗结果(包括临床结果)的经遗传修饰的治疗细胞(例如T细胞)的“有效量”。In a particular embodiment, the composition of the present invention contains a certain amount of the immune effector cells expressing the CAR of the present invention. As used herein, the term "amount" refers to an "effective amount" of genetically modified therapeutic cells (eg, T cells) that achieve beneficial or desired preventive or therapeutic results (including clinical results).
“预防有效量”是指有效实现所希望的预防结果的经遗传修饰的治疗细胞的量。通常但不是必须的,因为预防剂量在受试者中用于疾病之前或疾病的早期阶段,所以预防有效量小于治疗有效量。术语预防不一定是指完全禁止或防止特定的医学病症。术语预防还指降低某种医学病症发生或症状恶化的风险。"Prophylactically effective amount" refers to the amount of genetically modified therapeutic cells effective to achieve the desired preventive result. Usually, but not necessary, because the preventive dose is used in the subject before or in the early stage of the disease, the preventive effective amount is less than the therapeutically effective amount. The term prevention does not necessarily mean the complete prohibition or prevention of specific medical conditions. The term prevention also refers to reducing the risk of a certain medical condition or worsening symptoms.
经遗传修饰的治疗细胞的“治疗有效量”可以根据各种因素而变化,所述因素例如疾病状态、年龄、性别和个体体重,以及干细胞和祖细胞在个体中引发所希望的反应的能力。治疗有效量也是这样的量,即,治疗有益效果超过病毒或转导的治疗细胞的任何毒性或有害作用。术语“治疗有效量”包括有效“治疗”受试者(例如患者)的量。当指示治疗量时,可以由医生在考虑年龄、体重、肿瘤大小、感染或转移的程度和患者(受试者)状况的个体差异的情况下确定待施用的本发明组合物的精确量。可以通常规定的是,包含本文所述T细胞的药物组合物可以以10 2至10 10个细胞/kg体重,优选10 5至10 6个细胞/kg体重的剂量(包括在这些范围内的所有整数值)来施用。细胞的数量将取决于组合物的最终用途以及其中包含的细胞类型。对于本文提供的用途,细胞通常为1L或更少的体积,可以为500mL或更少,甚至250mL或100mL或更少。因此,所希望细胞的密度通常大于10 6个细胞/ml,通常大于10 7个细胞/ml,通常为10 8个细胞/ml或更高。免疫细胞的临床相关数量可以分配成多次输注,该多次输注累积等于或超过10 5、10 6、10 7、10 8、10 9、10 10、10 11或10 12个细胞。在本发明的一些实施方式中,特别是因为所有输注的细胞将被重定向至特定的靶抗原,可以施用较低数量的细胞。表达CAR的细胞组合物可以在这些范围内的剂量下多次施用。对于接受治疗的患者,细胞可以是同种异体的、同基因的、异基因的或自体的。 The "therapeutically effective amount" of genetically modified therapeutic cells can vary depending on various factors such as disease state, age, sex, and individual body weight, as well as the ability of stem and progenitor cells to elicit a desired response in the individual. A therapeutically effective amount is also an amount in which the therapeutically beneficial effect exceeds any toxic or detrimental effects of the virus or transduced therapeutic cells. The term "therapeutically effective amount" includes an amount effective to "treat" a subject (eg, a patient). When the therapeutic amount is indicated, the doctor can determine the precise amount of the composition of the present invention to be administered in consideration of individual differences in age, weight, tumor size, degree of infection or metastasis, and patient (subject) condition. Can usually provide that a pharmaceutical composition comprising the T cells described herein may be 10 2 to 10 10 cells / kg body weight, dose is preferably 105 to 106 cells / kg body weight (including all those within the scope of Integer value) to apply. The number of cells will depend on the end use of the composition and the type of cells contained therein. For the uses provided herein, the cells are generally 1 L or less in volume, and can be 500 mL or less, or even 250 mL or 100 mL or less. Thus, the desired cell density is typically greater than 10 6 cells / ml, usually greater than 10 7 cells / ml, usually 108 cells / ml or more. The clinically relevant number of immune cells can be allocated to multiple infusions, and the multiple infusions accumulate equal to or exceed 10 5 , 10 6 , 10 7 , 10 8 , 10 9 , 10 10 , 10 11 or 10 12 cells. In some embodiments of the invention, especially because all infused cells will be redirected to a specific target antigen, a lower number of cells can be administered. The CAR-expressing cell composition can be administered multiple times at doses within these ranges. For patients receiving treatment, the cells can be allogeneic, syngeneic, allogeneic, or autologous.
通常,包含如本文所述活化和扩增的细胞的组合物可用于治疗和防止免疫受损个体中出现的疾病。特别地,包含本发明的经CAR修饰的T细胞的组合物用于治疗B细胞恶性肿瘤。本发明的经CAR修饰的T细胞可以单独施用,或作为药物组合物与载体、稀释剂、赋形剂和/或与其他组分(例如IL-2)或其他细胞因子或细胞群组合施用。在特别的实施方式中,本发明的药物组合物包含一定量的经遗传修饰的T细胞,以及一种或多种药学上或生理学上可接受的载体、稀释剂或赋形剂。Generally, a composition comprising cells activated and expanded as described herein can be used to treat and prevent diseases that occur in immunocompromised individuals. In particular, the composition comprising the CAR-modified T cell of the present invention is used to treat B cell malignancies. The CAR-modified T cells of the present invention can be administered alone or as a pharmaceutical composition in combination with carriers, diluents, excipients, and/or other components (such as IL-2) or other cytokines or cell populations. In a particular embodiment, the pharmaceutical composition of the present invention contains a certain amount of genetically modified T cells, and one or more pharmaceutically or physiologically acceptable carriers, diluents or excipients.
包含表达CAR的免疫效应细胞群(例如T细胞)的本发明药物组合物可包含:缓冲液,例如中性缓冲盐水、磷酸盐缓冲盐水等;碳水化合物,例如葡萄糖、甘露糖、蔗糖或葡聚糖、甘露醇;蛋白质;多肽或氨基酸(例如甘氨酸);抗氧化剂;螯合剂(例如EDTA)或谷胱甘肽;佐剂,例 如氢氧化铝;和防腐剂。优选配制本发明的组合物用于肠胃外施用,例如血管内(静脉内或动脉内)、腹膜内或肌肉内施用。The pharmaceutical composition of the present invention comprising a population of immune effector cells (such as T cells) expressing CAR may include: buffer, such as neutral buffered saline, phosphate buffered saline, etc.; carbohydrates, such as glucose, mannose, sucrose or dextran Sugar, mannitol; protein; polypeptides or amino acids (for example, glycine); antioxidants; chelating agents (for example, EDTA) or glutathione; adjuvants, such as aluminum hydroxide; and preservatives. The composition of the invention is preferably formulated for parenteral administration, such as intravascular (intravenous or intraarterial), intraperitoneal or intramuscular administration.
液体药物组合物无论是溶液、悬浮液或其他类似形式,可包括以下中的一种或多种:无菌稀释剂(例如注射用水)、盐水溶液(优选生理盐水、林格氏溶液、等渗氯化钠)、固定油(例如可用作溶剂或悬浮介质的合成单甘油酯或甘油二酯)、聚乙二醇、甘油、丙二醇或其它溶剂;抗菌剂,例如苯甲醇或对羟基苯甲酸甲酯;抗氧化剂,例如抗坏血酸或亚硫酸氢钠;螯合剂,例如乙二胺四乙酸;和缓冲剂,例如乙酸盐、柠檬酸盐或磷酸盐,和调节渗透压的试剂,例如氯化钠或葡萄糖。肠胃外制剂可以封装在由玻璃或塑料制成的安瓿、一次性注射器或多剂量小瓶中。可注射药物组合物优选是无菌的。The liquid pharmaceutical composition, whether in a solution, suspension or other similar form, may include one or more of the following: sterile diluent (for example, water for injection), saline solution (preferably normal saline, Ringer's solution, isotonic Sodium chloride), fixed oils (such as synthetic monoglycerides or diglycerides that can be used as solvents or suspension media), polyethylene glycol, glycerin, propylene glycol or other solvents; antibacterial agents, such as benzyl alcohol or p-hydroxybenzoic acid Methyl ester; antioxidants, such as ascorbic acid or sodium bisulfite; chelating agents, such as ethylenediaminetetraacetic acid; and buffers, such as acetate, citrate, or phosphate, and agents that regulate osmotic pressure, such as chlorination Sodium or glucose. The parenteral preparation can be enclosed in ampoules, disposable syringes or multiple dose vials made of glass or plastic. The injectable pharmaceutical composition is preferably sterile.
在特别的实施方式中,本发明的组合物包含单独的有效量的表达CAR的免疫效应细胞,或其与一种或多种治疗剂的组合。因此,表达CAR的免疫效应细胞组合物可以单独施用或与其他已知的癌症治疗组合施用,所述其他已知的癌症治疗例如放射疗法、化学疗法、移植、免疫疗法、激素疗法、光动力疗法等。组合物也可以与抗生素组合施用。本领域可接受这类治疗剂作为如本文所述的特定疾病状态(例如特定癌症)的标准治疗。考虑的示例性治疗剂包括细胞因子、生长因子、类固醇、NSAID、DMARD、抗炎剂、化学治疗剂、放射治疗剂、治疗性抗体或其他活性和辅助性药剂。In a particular embodiment, the composition of the present invention contains an effective amount of immune effector cells expressing CAR alone, or in combination with one or more therapeutic agents. Therefore, the CAR-expressing immune effector cell composition can be administered alone or in combination with other known cancer treatments such as radiotherapy, chemotherapy, transplantation, immunotherapy, hormone therapy, photodynamic therapy Wait. The composition can also be administered in combination with antibiotics. Such therapeutic agents are accepted in the art as standard treatments for specific disease states (e.g., specific cancers) as described herein. Exemplary therapeutic agents contemplated include cytokines, growth factors, steroids, NSAIDs, DMARDs, anti-inflammatory agents, chemotherapeutic agents, radiotherapeutics, therapeutic antibodies or other active and auxiliary agents.
治疗方法treatment method
本发明的经遗传修饰的免疫效应细胞提供用于治疗B细胞相关病症的过继免疫疗法的改进方法,所述B细胞相关病症包括但不限于免疫调节病症和血液学恶性肿瘤。The genetically modified immune effector cells of the present invention provide an improved method of adoptive immunotherapy for the treatment of B cell-related disorders, including but not limited to immunomodulatory disorders and hematological malignancies.
在特别的实施方式中,包含含有本发明的CAR的免疫效应细胞的组合物用于治疗与异常B细胞活性相关的病症,也称为“与致病性B细胞的存在相关的医学病症”。In a particular embodiment, the composition comprising immune effector cells containing the CAR of the present invention is used to treat disorders related to abnormal B cell activity, also referred to as "medical disorders related to the presence of pathogenic B cells".
如本文所用,“与致病性B细胞的存在相关的医学病症”或“B细胞恶性肿瘤”是指在B细胞中形成的医学病症,例如癌症。在特别的实施方式中,本发明的包含经CAR修饰的T细胞的组合物用于治疗恶性血 液病,包括但不限于B细胞恶性肿瘤,例如多发性骨髓瘤(MM)、急性髓细胞性白血病和非霍奇金淋巴瘤(NHL)。As used herein, "medical conditions associated with the presence of pathogenic B cells" or "B-cell malignancies" refer to medical conditions formed in B cells, such as cancer. In a particular embodiment, the composition comprising CAR-modified T cells of the present invention is used to treat hematological malignancies, including but not limited to B-cell malignancies, such as multiple myeloma (MM), acute myeloid leukemia And non-Hodgkin's lymphoma (NHL).
在本发明的另一个方面,提供了如本文所述的根据本发明的CAR和CAR-T,其用于治疗选自以下的由B细胞介导的或浆细胞介导的疾病或抗体介导的疾病或病症:多发性骨髓瘤(MM)、慢性淋巴细胞白血病(CLL)、非分泌性多发性骨髓瘤、郁积型多发性骨髓瘤、意义未明的单克隆丙种球蛋白病(MGUS)、孤立性浆细胞瘤(骨、髓外)、淋巴浆细胞性淋巴瘤(LPL)、浆细胞白血病、原发性淀粉样变性(AL)、重链疾病、系统性红斑狼疮(SLE)、POEMS综合征/骨硬化性骨髓瘤、I型和II型冷球蛋白血症、轻链沉积病、特发性血小板减少性紫癜(ITP)、急性肾小球肾炎、天疱疮和类天疱疮病症、以及大疱性表皮松解症;或任何具有BCMA表达的非霍奇金淋巴瘤B细胞白血病或霍奇金淋巴瘤(HL)或患者产生针对重组蛋白替代疗法的中和抗体的任何疾病,其中所述方法包括向所述患者施用治疗有效量的如本文所述的CAR或CAR-T。In another aspect of the present invention, the CAR and CAR-T according to the present invention as described herein are provided for the treatment of B cell-mediated or plasma cell-mediated diseases or antibody-mediated diseases selected from the group consisting of Diseases or conditions of: multiple myeloma (MM), chronic lymphocytic leukemia (CLL), nonsecretory multiple myeloma, smoldering multiple myeloma, monoclonal gammopathy of unknown significance (MGUS), isolated Plasmacytoma (bone, extramedullary), lymphoplasmacytic lymphoma (LPL), plasma cell leukemia, primary amyloidosis (AL), heavy chain disease, systemic lupus erythematosus (SLE), POEMS syndrome /Sclerosing myeloma, type I and type II cryoglobulinemia, light chain deposition disease, idiopathic thrombocytopenic purpura (ITP), acute glomerulonephritis, pemphigus and pemphigoid disorders, And epidermolysis bullosa; or any non-Hodgkin’s lymphoma B-cell leukemia or Hodgkin’s lymphoma (HL) with BCMA expression or any disease in which the patient produces neutralizing antibodies against recombinant protein replacement therapy, where The method includes administering to the patient a therapeutically effective amount of a CAR or CAR-T as described herein.
多发性骨髓瘤是成熟浆细胞形态的B细胞恶性肿瘤,其特征在于这些类型细胞的单个克隆的肿瘤转化。这些浆细胞在BM中增殖并且可能侵入邻近的骨骼,有时侵入血液。多发性骨髓瘤的变异形式包括显性多发性骨髓瘤(overt multiple myeloma)、郁积型多发性骨髓瘤、浆细胞白血病、非分泌性骨髓瘤、IgD骨髓瘤、骨硬化性骨髓瘤、孤立性浆细胞瘤和髓外浆细胞瘤。Multiple myeloma is a B-cell malignant tumor of mature plasma cell morphology, which is characterized by tumor transformation of a single clone of these types of cells. These plasma cells proliferate in the BM and may invade adjacent bones, sometimes invading the blood. Variant forms of multiple myeloma include dominant multiple myeloma (overt multiple myeloma), smoldering multiple myeloma, plasma cell leukemia, nonsecretory myeloma, IgD myeloma, osteosclerotic myeloma, solitary plasma Cell tumor and extramedullary plasmacytoma.
非霍奇金淋巴瘤包括一大群的淋巴细胞癌(白血细胞)。非霍奇金淋巴瘤可以在任何年龄发生,并且通常以比正常时更大的淋巴结、发热和体重减轻为标记。非霍奇金淋巴瘤也可存在于结外部位,例如中枢神经系统、粘膜组织,包括肺、肠、结肠和内脏。有许多不同类型的非霍奇金淋巴瘤。例如,非霍奇金淋巴瘤可分为侵袭性(快速生长)和惰性(慢性生长)类型。尽管非霍奇金淋巴瘤可以源自B细胞和T细胞,如本文所用,术语“非霍奇金淋巴瘤”和“B细胞非霍奇金淋巴瘤”可互换使用。B细胞非霍奇金淋巴瘤(NHL)包括伯基特淋巴瘤、慢性淋巴细胞白血病/小淋巴细胞淋巴瘤(CLL/SLL)、弥漫性大B细胞淋巴瘤、滤泡性淋巴瘤、免疫母细胞型大细胞淋巴瘤、前体B淋巴母细胞淋巴瘤和套细胞 淋巴瘤。骨髓或干细胞移植后发生的淋巴瘤通常是B细胞非霍奇金淋巴瘤。Non-Hodgkin's lymphoma includes a large group of lymphocytic carcinomas (white blood cells). Non-Hodgkin's lymphoma can occur at any age and is usually marked by larger lymph nodes, fever, and weight loss than normal. Non-Hodgkin's lymphoma can also exist in extranodal sites, such as the central nervous system, mucosal tissues, including lungs, intestines, colons, and internal organs. There are many different types of non-Hodgkin's lymphoma. For example, non-Hodgkin's lymphoma can be divided into aggressive (rapid growth) and indolent (chronic growth) types. Although non-Hodgkin's lymphoma can be derived from B cells and T cells, as used herein, the terms "non-Hodgkin's lymphoma" and "B-cell non-Hodgkin's lymphoma" are used interchangeably. B-cell non-Hodgkin’s lymphoma (NHL) includes Burkitt’s lymphoma, chronic lymphocytic leukemia/small lymphocytic lymphoma (CLL/SLL), diffuse large B-cell lymphoma, follicular lymphoma, immunogen Cellular large cell lymphoma, precursor B lymphoblastic lymphoma, and mantle cell lymphoma. Lymphoma that occurs after bone marrow or stem cell transplantation is usually B-cell non-Hodgkin's lymphoma.
如本文所用,术语“个体”和“受试者”通常可互换使用,并且是指可以用本文别处公开的基因治疗载体、基于细胞的治疗剂和方法治疗的表现出疾病、病症或病况的症状的任何动物。在优选的实施方式中,受试者包括可以用本文别处公开的基因治疗载体、基于细胞的治疗剂和方法治疗的表现出造血系统的疾病、病症或病况(例如B细胞恶性肿瘤)的症状的任何动物。典型的受试者包括实验动物(例如小鼠、大鼠、兔或豚鼠)、农场动物和家畜或宠物(例如猫或狗)。包括非人灵长类动物,优选包括人类患者。典型的受试者包括具有B细胞恶性肿瘤,已被诊断患有B细胞恶性肿瘤或处在具有B细胞恶性肿瘤的风险中的人类患者。As used herein, the terms "individual" and "subject" are generally used interchangeably, and refer to a disease, disorder, or condition that can be treated with gene therapy vectors, cell-based therapeutic agents, and methods disclosed elsewhere herein Symptoms of any animal. In a preferred embodiment, subjects include those exhibiting symptoms of diseases, disorders, or conditions of the hematopoietic system (such as B cell malignancies) that can be treated with gene therapy vectors, cell-based therapeutics and methods disclosed elsewhere herein Any animal. Typical subjects include laboratory animals (e.g., mice, rats, rabbits, or guinea pigs), farm animals, and domestic animals or pets (e.g., cats or dogs). Including non-human primates, preferably including human patients. Typical subjects include human patients who have B-cell malignancies, have been diagnosed with B-cell malignancies, or are at risk of having B-cell malignancies.
如本文所用,“治疗”包括对疾病或病理状况的症状或病理学的任何有益或期望的作用,并且可包括所治疗的疾病或病症的一种或多种可测量标记物的甚至最小的减少。治疗可任选地涉及疾病或病症的症状的减轻或改善,或疾病或病症的进展的延迟。“治疗”不一定表示完全根除或治愈疾病或病症或其相关症状。As used herein, "treatment" includes any beneficial or desired effect on the symptoms or pathology of the disease or pathological condition, and may include even minimal reduction of one or more measurable markers of the disease or condition being treated . The treatment may optionally involve the reduction or improvement of the symptoms of the disease or disorder, or the delay in the progression of the disease or disorder. "Treatment" does not necessarily mean the complete eradication or cure of a disease or condition or its related symptoms.
如本文所用,“预防”表示防止、抑制或降低疾病或病症发生或复发的可能性的方法。它还指延迟疾病或病症的发作或复发,或延迟疾病或病症的症状的发生或复发。如本文所用,“防止”和类似词语还包括在疾病或病症发作或复发之前降低疾病或病症的强度、影响、症状和/或负担。As used herein, "prevention" means a method of preventing, inhibiting, or reducing the likelihood of occurrence or recurrence of a disease or condition. It also refers to delaying the onset or recurrence of a disease or condition, or delaying the onset or recurrence of symptoms of a disease or condition. As used herein, "prevent" and similar words also include reducing the intensity, impact, symptoms, and/or burden of the disease or condition before the onset or recurrence of the disease or condition.
在一种实施方式中,在有此需要的受试者中治疗B细胞相关病症的方法包括施用有效量、例如治疗有效量的包含本发明的经遗传修饰的免疫效应细胞的组合物。施用的数量和频率将由诸如患者的状况以及患者的疾病的类型和严重性等因素确定,尽管适当的剂量可以通过临床试验确定。In one embodiment, a method of treating a B cell-related disorder in a subject in need thereof includes administering an effective amount, for example, a therapeutically effective amount, of a composition comprising the genetically modified immune effector cells of the present invention. The number and frequency of administration will be determined by factors such as the patient's condition and the type and severity of the patient's disease, although the appropriate dosage can be determined through clinical trials.
本发明的组合物的施用可以以任何方便的方式进行,包括通过气溶胶吸入、注射、摄取、输血、植入或移植进行。在优选的实施方式中,肠胃外施用组合物。本文所用的短语“肠胃外施用”是指除肠内和局部施用以外的施用方式,通常通过注射,包括但不限于血管内、静脉内、肌肉内、动脉内、鞘内、囊内、眶内、瘤内、心内、皮内、腹膜内、经 气管、皮下、表皮下、关节内、包膜下、蛛网膜下腔、脊柱内和胸骨内注射和输注。在一种实施方式中,通过直接注射到肿瘤、淋巴结或感染部位而将本发明的组合物施用于受试者。The administration of the composition of the present invention can be carried out in any convenient way, including by aerosol inhalation, injection, ingestion, blood transfusion, implantation or transplantation. In a preferred embodiment, the composition is administered parenterally. As used herein, the phrase "parenteral administration" refers to administration methods other than enteral and topical administration, usually by injection, including but not limited to intravascular, intravenous, intramuscular, intraarterial, intrathecal, intrasaccular, or orbital , Intratumoral, intracardiac, intradermal, intraperitoneal, transtracheal, subcutaneous, subcutaneous, intraarticular, subcapsular, subarachnoid, intraspine and intrasternal injections and infusions. In one embodiment, the composition of the present invention is administered to the subject by direct injection into the tumor, lymph node, or infection site.
本文中出现的英文名称不区分大小写;BCMA CAR-T表示能表达BCMA特异性结合域的CAR-T细胞;CD8 TM表示跨膜结构域。 English names appearing in this article are not case-sensitive; BCMA CAR-T means CAR-T cells that can express BCMA specific binding domain; CD8 TM means transmembrane domain.
相对NK细胞(包括CAR-NK)而言,本发明对T细胞(包括CAR-T细胞)进行了更详尽的描述,但是一般情况下对于T细胞的这些描述也是适用于NK细胞的。在此,将对T细胞描述的内容中出现“T细胞”或其同义词替换为“NK细胞”或其同义词的描述纳入此处。这从叙述简洁的角度考虑是十分必要的。如果根据现有技术判断在某些情况下这种替换是不合适的,则不进行该替换。Compared with NK cells (including CAR-NK), the present invention provides a more detailed description of T cells (including CAR-T cells), but in general, these descriptions of T cells are also applicable to NK cells. Here, the description of "T cell" or its synonyms in the description of T cells is replaced with "NK cell" or its synonyms. This is very necessary from the perspective of narrative conciseness. If it is judged that the replacement is inappropriate in some cases according to the prior art, the replacement is not performed.
本文已采用的术语和表述用作描述性而不是限制性术语,并且在此种术语和表述的使用中不预期排除所示和所述特征或其部分的任何等价物,但应认识到各种修饰在请求保护的本发明的范围内是可能的。因此,应当理解尽管本发明已通过优选实施方案和任选特征具体公开,但本领域技术人员可以采用本文公开的概念的修饰和变化,并且此类修饰和变化被视为在如由附加权利要求定义的本发明的范围内。The terms and expressions used herein are used as descriptive rather than restrictive terms, and the use of such terms and expressions is not intended to exclude any equivalents of the shown and described features or parts thereof, but various modifications should be recognized It is possible within the scope of the claimed invention. Therefore, it should be understood that although the present invention has been specifically disclosed through preferred embodiments and optional features, those skilled in the art can adopt modifications and variations of the concepts disclosed herein, and such modifications and variations are deemed to be as defined by the appended claims. Defined within the scope of the invention.
附图说明Description of the drawings
图1使用ELISA法测定Lead 1 VHH-FC融合蛋白(抗BCMA抗体,VHH-IgG1Fc)与人BCMA抗原重组蛋白的亲和力的测试结果。Figure 1 The test results of the affinity between the Lead 1 VHH-FC fusion protein (anti-BCMA antibody, VHH-IgG1Fc) and the human BCMA antigen recombinant protein using the ELISA method.
图2是使用流式细胞仪检测Lead 1 VHH-FC融合蛋白与BCMA过表达细胞株RPMI8226的亲和力的检测结果。Figure 2 shows the results of the detection of the affinity between the Lead 1 VHH-FC fusion protein and the BCMA overexpression cell line RPMI8226 using flow cytometry.
图3为本发明实施例提供的BCMA-CART结构中CAR的结构示意图,其中通过CD8a铰链-跨膜(TM)域和4-1BB共刺激结构域与CD3ζ信号传导区融合的。Fig. 3 is a schematic structural diagram of CAR in the BCMA-CART structure provided by an embodiment of the present invention, in which the CD8a hinge-transmembrane (TM) domain and the 4-1BB co-stimulatory domain are fused with the CD3ζ signaling region.
图4用流式细胞仪检测的CAR-T细胞中CAR表达结果。Figure 4 CAR expression results in CAR-T cells detected by flow cytometry.
图5显示本发明的CAR-T对多发性骨髓瘤细胞株具有显著的抑制作用。Figure 5 shows that the CAR-T of the present invention has a significant inhibitory effect on multiple myeloma cell lines.
图6显示本发明的CAR-T对多发性骨髓瘤有特异性抑制作用。Figure 6 shows that the CAR-T of the present invention has a specific inhibitory effect on multiple myeloma.
图7显示BCMA-PE24重组免疫毒素(RITs)对多发性骨髓瘤细胞株的 体外杀伤作用。Figure 7 shows the in vitro killing effect of BCMA-PE24 recombinant immunotoxins (RITs) on multiple myeloma cell lines.
为更清楚地说明本发明,现结合如下实施例进行详细说明,但这些实施例仅仅是对本发明的示例性描述,并不能解释为对本申请的限制。In order to illustrate the present invention more clearly, a detailed description will now be given in conjunction with the following embodiments, but these embodiments are merely exemplary descriptions of the present invention and cannot be construed as limiting the present application.
实施例1:羊驼(Alpaca)免疫和抗血清效价检测Example 1: Alpaca (Alpaca) immunization and antiserum titer detection
1、免疫方法1. Immunization method
颈背部皮下、肌肉多点注射人BCMA抗原重组蛋白成多个包块,跟踪观察皮下注射包块的吸收情况,以确认免疫正确。Multi-point injection of human BCMA antigen recombinant protein into multiple masses subcutaneously and intramuscularly on the back of the neck, follow up the absorption of subcutaneous injection masses to confirm the correct immunization.
2、免疫周期2. Immune cycle
(1)首次免疫:使用0.5mg抗原与弗氏完全佐剂1:1混合,乳化后注射,体积1ml/只羊驼;(2)第二次免疫:首次免疫3周后,使用0.25mg抗原与弗氏不完全佐剂1:1混合,乳化后注射,注射体积1ml/只羊驼;(3)第三次免疫:第二次免疫3周后,使用0.25mg抗原与弗氏不完全佐剂1:1混合,乳化后注射,注射体积1ml/只羊驼;(4)第四次免疫:三次免疫3周后,使用0.25mg抗原与弗氏不完全佐剂1:1混合,乳化后注射,注射体积1ml/只羊驼。(1) First immunization: Use 0.5 mg of antigen and Freund's complete adjuvant to mix 1:1, emulsify and inject, with a volume of 1 ml per alpaca; (2) Second immunization: 3 weeks after the first immunization, use 0.25 mg of antigen Mix with Freund's incomplete adjuvant 1:1, emulsify and inject, with an injection volume of 1ml per alpaca; (3) Third immunization: 3 weeks after the second immunization, use 0.25mg antigen and Freund's incomplete adjuvant Mix 1:1, emulsify and inject, with injection volume of 1ml per alpaca; (4) Fourth immunization: 3 weeks after three immunizations, mix 1:1 with 0.25mg antigen and Freund’s incomplete adjuvant, after emulsification Injection, the injection volume is 1ml per alpaca.
3、血清处理和抗血清效价检测:在第四次免疫后一周,采集外周血50ml,分离血清和淋巴细胞。将抗原包被在ELISA96孔板中,利用ELISA法测定血清中抗体效价。抗血清效价见下表。3. Serum processing and antiserum titer detection: one week after the fourth immunization, 50ml of peripheral blood was collected, and serum and lymphocytes were separated. The antigen was coated in an ELISA 96-well plate, and the antibody titer in the serum was measured by the ELISA method. The titer of antiserum is shown in the table below.
Figure PCTCN2020113046-appb-000004
Figure PCTCN2020113046-appb-000004
实施例2:噬菌体展示免疫抗体库的构建和筛选。Example 2: Construction and screening of phage display immune antibody library.
由于第四次血清效价>1:32000,表明血清中存在抗人BCMA的高亲和力抗体。进一步构建噬菌体展示免疫抗体库,并通过生物筛选获得抗人BCMA纳米抗体的阳性单克隆。Because the titer of the fourth serum was >1:32000, it indicated that there were high-affinity antibodies against human BCMA in the serum. The phage display immune antibody library was further constructed, and a positive monoclonal antibody against human BCMA Nanobody was obtained through biological screening.
1、收集羊驼第四次免疫后的血液,分离淋巴细胞PBMC;取2×10 7的PBMC,利用RNA提取试剂盒提取总RNA;取适量RNA(如3-5ug),通过RT-PCR反转录试剂盒获得cDNA。 1. Collect the blood of the alpaca after the fourth immunization, separate lymphocyte PBMC; take 2×10 7 PBMC, use RNA extraction kit to extract total RNA; take appropriate amount of RNA (such as 3-5ug), reverse by RT-PCR Transcription kit to obtain cDNA.
2、通过巢式PCR分步获取IgG2和IgG3重链可变区序列(纳米抗体的重链可变区域VHH)或通过一步法PCR方式获得IgG1、IgG2和IgG3的重链可变区序列(常规抗体IgG1的重链可变区域VH和纳米抗体IgG2、IgG3的重链可变区域VHH)。2. Obtain IgG2 and IgG3 heavy chain variable region sequences step by step (Nanobody heavy chain variable region VHH) by nested PCR or obtain IgG1, IgG2 and IgG3 heavy chain variable region sequences (routine The heavy chain variable region VH of antibody IgG1 and the heavy chain variable region VHH of Nanobody IgG2, IgG3).
3、通过同源重组或酶切连接的方式将重链可变区序列插入到经酶切处理的线性化噬菌粒载体pShort中,获得重组载体;经纯化回收后,转化超级感受态SS320细胞(含辅助噬菌体M13K07);转化后的菌液用SOC培养基重悬、活化1小时;取少量菌液进行10倍比梯度稀释,选取适宜的稀释滴度,于LB/tet 10及LB/Carb 50培养板上涂板,置于37℃生化培养箱过夜,次日用于库容的计算;剩余菌液转入大体积的2YT/Carb 50/Kan 25液体培养基中,置于37℃摇床,过夜培养,次日收获上清,加入1/4倍体积的PEG/NaCl溶液,沉淀噬菌体后,取适量PBT溶液重悬、稀释至需要的浓度,即得到噬菌体展示免疫抗体库(-80℃保存备用)。 3. Insert the heavy chain variable region sequence into the linearized phagemid vector pShort treated by restriction enzyme digestion by homologous recombination or restriction enzyme ligation to obtain the recombinant vector; after purification and recovery, transform super competent SS320 cells (Contains helper phage M13K07); the transformed bacterial solution is resuspended in SOC medium and activated for 1 hour; a small amount of bacterial solution is diluted by a 10-fold ratio, and the appropriate dilution titer is selected, which is used in LB/tet 10 and LB/Carb Spread the 50 culture plate and place it in a 37℃ biochemical incubator overnight. The next day it will be used for the calculation of storage capacity; the remaining bacterial liquid will be transferred to a large volume of 2YT/Carb 50 /Kan 25 liquid medium and placed on a 37℃ shaker , Culture overnight, harvest the supernatant the next day, add 1/4 times the volume of PEG/NaCl solution, after precipitation of the phage, take an appropriate amount of PBT solution to resuspend and dilute to the required concentration to obtain the phage display immune antibody library (-80℃ Save it for later).
4、统计LB/Carb 50平板上克隆数目,计算库容为:库1(巢式PCR):2.25×10 8;库2(一步法):1.63×10 8。从平板上各随机挑取20个单克隆测序,全部为VHH正确插入的克隆。 4. Count the number of clones on the LB/Carb 50 plate, and calculate the storage capacity as: library 1 (nested PCR): 2.25×10 8 ; library 2 (one-step method): 1.63×10 8 . Twenty single clones were randomly picked from the plate and sequenced, all of which were clones with correct insertion of VHH.
实施例3:抗体库的筛选Example 3: Screening of antibody library
1、将10μg/mL的人BCMA抗原重组蛋白加入96孔板,4℃包被过夜;将NEB5αF’大肠杆菌在2YT/Tet 10平板划线生长,37℃孵箱过夜培养; 1. Add 10μg/mL human BCMA antigen recombinant protein to a 96-well plate and coat overnight at 4°C; grow NEB5αF' on a 2YT/Tet 10 plate streak, and cultivate overnight at 37°C in an incubator;
2、第二天,从过夜的2YT/Tet 10平板上挑取NEB5αF’单克隆,加入到3ml 2YT/Tet 10液体培养基中,37℃摇菌生长至OD 600=0.8; 2. On the second day, pick NEB5αF' monoclonal from the overnight 2YT/Tet 10 plate, add it to 3ml 2YT/Tet 10 liquid medium, and grow the bacteria at 37°C to OD 600 = 0.8;
3、同时,去除96孔板的抗原上清液,每孔加入200μL的1%BSA封闭,同时在空白孔加入200μL 1%BSA作为阴性对照孔,在室温下置于3D旋转振荡器2小时;之后,去除蛋白孔和对照孔的上清液,用200uL PT清洗,各加入100uL的噬菌体抗体库,在室温下置于3D旋转振荡器2小时;去除蛋白孔和对照孔的上清液,用200uL PT清洗;向孔中加入100μL 100mM HCl,室温放置5分钟;将上清液吸出,加入到1.5ml离心管中,使用1M Tris-HCl中和。3. At the same time, remove the antigen supernatant of the 96-well plate, add 200μL of 1% BSA to each well to block, and add 200μL of 1% BSA to the blank well as a negative control well, and place it on a 3D rotary shaker at room temperature for 2 hours; After that, remove the supernatants of the protein wells and control wells, wash with 200uL PT, add 100uL of phage antibody library to each, place in a 3D rotary shaker at room temperature for 2 hours; remove the supernatants of the protein wells and control wells, and use Wash with 200uL PT; add 100μL 100mM HCl to the well and leave it at room temperature for 5 minutes; aspirate the supernatant, add it to a 1.5ml centrifuge tube, and neutralize with 1M Tris-HCl.
4、将步骤3获得的混合液加入到含1mL NEB5αF’菌的离心管中,摇床37℃,培养1小时;取离心管中培养液20μL进行适宜倍数的稀释, 于LB/Carb 50培养板上涂板,置于37℃生化培养箱过夜,次日用于滴度和富集程度的计算;剩余培养液中加入1μL辅助噬菌体M13K07(终浓度为10 10个/mL),摇床37℃,培养1小时;将上述培养液转入35mL 2YT/Carb 50/Kan 25培养液中,置于摇床中,37℃过夜培养,收集噬菌体形成每轮的抗体库。 4. Add the mixture obtained in step 3 to a centrifuge tube containing 1 mL of NEB5αF' bacteria, incubate at 37°C on a shaker for 1 hour; take 20 μL of the culture solution in the centrifuge tube and dilute it at an appropriate multiple and place it on an LB/Carb 50 culture plate Coat the plate and place it in a 37°C biochemical incubator overnight. The next day is used for the calculation of titer and enrichment degree; 1μL helper phage M13K07 (final concentration of 10 10 /mL) is added to the remaining culture solution, and the shaker is 37°C , Incubate for 1 hour; transfer the above-mentioned culture medium to 35mL 2YT/Carb 50 /Kan 25 culture medium, place in a shaker, and incubate at 37°C overnight, and collect phage to form an antibody library for each round.
5、重复以上操作3-5轮,直到出现噬菌体富集。若抗原结合孔在LB/Carb 50培养板上的菌落数是阴性对照孔的10倍以上,视为富集成功。在本实验中,第三轮筛选后,抗原结合孔的菌落数是阴性对照孔的100倍,表明富集成功,则进入Phage-ELISA挑选高亲和力的阳性克隆。 5. Repeat the above operation for 3-5 rounds until phage enrichment occurs. If the number of colonies in the antigen-binding well on the LB/Carb 50 culture plate is more than 10 times that of the negative control well, the enrichment is considered successful. In this experiment, after the third round of screening, the number of colonies in the antigen-binding wells was 100 times that of the negative control wells, indicating that the enrichment was successful, then enter Phage-ELISA to select high-affinity positive clones.
实施例4:Phage-ELISA鉴定阳性克隆和测序Example 4: Phage-ELISA identification of positive clones and sequencing
1、在96深孔板中,每孔加入400μL2YT/Carb 50/Kan 25/M13K07培养基;从获得富集的LB/Carb 50培养板上挑取单克隆,转入96深孔板中,置于摇床,在200rpm、37℃条件下过夜,第二天离心,上清液即为每个单克隆生产的噬菌体。 1. In a 96 deep well plate, add 400μL of 2YT/Carb 50 /Kan 25 /M13K07 medium to each well; pick a single clone from the enriched LB/Carb 50 culture plate, transfer it to the 96 deep well plate, and place Place it on a shaker at 200 rpm and 37°C overnight, and centrifuge the next day. The supernatant is the phage produced by each single clone.
2、同时将人BCMA抗原重组蛋白稀释到1μg/mL,按50μL/孔加入ELISA 96孔板中,置于4℃冰箱过夜;2. Dilute the recombinant human BCMA antigen protein to 1μg/mL at the same time, add 50μL/well to an ELISA 96-well plate, and place in a refrigerator at 4°C overnight;
3、第二天,将ELISA板倒扣以去上清,然后每孔加入100μL 1%BSA封闭;空白孔中加入100μL 1%BSA作为阴性对照孔;室温下孵育1小时。封闭完成后,抗原孔和阴性对照孔用PT溶液清洗后,加入50μL96深孔板的上清液,室温下孵育2小时;每个单克隆获得的上清液,分别加入一个抗原孔和一个阴性对照孔。3. On the second day, turn the ELISA plate upside down to remove the supernatant, and then add 100 μL 1% BSA to each well to block; add 100 μL 1% BSA to the blank well as a negative control well; incubate at room temperature for 1 hour. After the blocking is completed, the antigen wells and negative control wells are washed with PT solution, add 50μL of 96 deep-well plate supernatant and incubate at room temperature for 2 hours; add one antigen well and one negative for each supernatant obtained from each monoclonal Control hole.
4、结合完成后,用PT溶液清洗ELISA板子,加入HRP-M13抗体50μL,室温孵育1小时;用PT溶液和PBS溶液清洗后,加入50μL TMB,室温孵育5分钟,然后加入50μL的1M磷酸终止反应;用酶标仪测量450nm处的吸光度值。Phage-ELISA结果如下表。4. After the binding is completed, wash the ELISA plate with PT solution, add 50μL of HRP-M13 antibody, and incubate at room temperature for 1 hour; after washing with PT solution and PBS solution, add 50μL of TMB, incubate at room temperature for 5 minutes, and then add 50μL of 1M phosphoric acid to terminate Reaction; Measure the absorbance value at 450nm with a microplate reader. The results of Phage-ELISA are shown in the table below.
Figure PCTCN2020113046-appb-000005
Figure PCTCN2020113046-appb-000005
Figure PCTCN2020113046-appb-000006
Figure PCTCN2020113046-appb-000006
注:当OD值>3,超过酶标仪的读数范围,酶标仪将读数自动设置为“溢出”。Note: When the OD value>3 exceeds the reading range of the microplate reader, the microplate reader will automatically set the reading to "overflow".
将抗原孔OD值>0.5(包括溢出孔)和阴性对照孔OD值<0.2所对应的单克隆认定为具有较高亲和力的阳性克隆,进行单克隆DNA测序;对应的序列见下表。The monoclonal corresponding to the antigen well OD value> 0.5 (including overflow wells) and the negative control well OD value <0.2 are identified as positive clones with higher affinity, and the monoclonal DNA sequencing is performed; the corresponding sequences are shown in the table below.
将抗原孔OD值>0.5(包括溢出孔)和阴性对照孔OD值<0.2所对应的单克隆认定为具有较高亲和力的阳性克隆,进行单克隆DNA测序;对应的序列见下表(CDR区域的定义使用North方法,Lead1-Lead3的用斜体和/或下划线标识;Lead4-Lead19的CDR如表1所示)。The monoclonal corresponding to the antigen well OD value> 0.5 (including overflow wells) and the negative control well OD value <0.2 are identified as positive clones with higher affinity, and the monoclonal DNA sequencing is performed; the corresponding sequences are shown in the table below (CDR regions) The definition of using the North method, Lead1-Lead3 are marked with italics and/or underline; the CDRs of Lead4-Lead19 are shown in Table 1).
Figure PCTCN2020113046-appb-000007
Figure PCTCN2020113046-appb-000007
Figure PCTCN2020113046-appb-000008
Figure PCTCN2020113046-appb-000008
Figure PCTCN2020113046-appb-000009
Figure PCTCN2020113046-appb-000009
Figure PCTCN2020113046-appb-000010
Figure PCTCN2020113046-appb-000010
实施例5:BCMA的真核表达(VHH-Fc融合蛋白)及亲和力鉴定。Example 5: Eukaryotic expression of BCMA (VHH-Fc fusion protein) and affinity identification.
对筛选到的Lead 1序列进行了真核表达,研究其与抗原重组蛋白和抗原过表达细胞株的亲和力。Eukaryotic expression was performed on the selected Lead 1 sequence, and its affinity with antigen recombinant protein and antigen overexpression cell line was studied.
1、通过PCR扩增Lead 1的VHH片段,使用同源重组或者酶切连接的方法将片段插入含有人IgG1部分片段(hinge+CH2+CH3,和VHH融合后的融合蛋白的氨基酸序列如SEQ ID NO:4所述,核苷酸序列如SEQ ID NO:3所述)的真核表达载体pFcIG中;电转入大肠杆菌trans5α宿主菌中,经过氨苄青霉素筛选,对单克隆测序获得正确的重组质粒;然后扩大培养含重组质粒的宿主菌,使用去内毒素试剂盒获得无菌无内毒素质粒;1. Amplify the VHH fragment of Lead 1 by PCR, insert the fragment into a partial fragment of human IgG1 (hinge+CH2+CH3, and the amino acid sequence of the fusion protein after fusion with VHH, such as SEQ ID) using homologous recombination or restriction enzyme ligation. As described in NO: 4, the nucleotide sequence is as described in SEQ ID NO: 3) in the eukaryotic expression vector pFcIG; electrotransformed into E. coli trans5α host bacteria, screened by ampicillin, and obtained the correct recombination by sequencing the monoclonal Plasmids; then expand the culture of host bacteria containing recombinant plasmids, and use endotoxin-removing kits to obtain sterile endotoxin-free plasmids;
2、用无血清培养基培养293F细胞;使用polyplus悬浮细胞转染试剂将重组表达质粒转入293F细胞进行表达。在转染24和72小时后加入补料,在第5天收集上清,进行纯化。计算得知:Lead 1的VHH-FC融合蛋白的产量为95mg/L;SDS-PAGE电泳鉴定Lead 1 VHH-FC的条带大小正常,纯度>95%。2. Cultivate 293F cells with serum-free medium; use polyplus suspension cell transfection reagent to transfer the recombinant expression plasmid into 293F cells for expression. Feed was added 24 and 72 hours after transfection, and the supernatant was collected on the 5th day for purification. The calculation shows that: the yield of Lead 1's VHH-FC fusion protein is 95 mg/L; SDS-PAGE electrophoresis identified the lead 1 VHH-FC band size is normal, and the purity is >95%.
3、使用ELISA法,测定Lead 1 VHH-FC融合蛋白与人BCMA抗原重组蛋白的亲和力:1)将人BCMA抗原重组蛋白加入到ELISA 96孔板中,4℃包被过夜;2)将VHH-Fc融合蛋白稀释到不同的浓度,与抗原进行ELISA反应,用酶标仪测量450nm处的吸光度值;结果见图1。实验结果表明:BCMA Lead 1 VHH-FC融合蛋白能够结合人BCMA抗原重组蛋白,其EC 50=4.2nM。 3. Using the ELISA method, determine the affinity between the Lead 1 VHH-FC fusion protein and the human BCMA antigen recombinant protein: 1) Add the human BCMA antigen recombinant protein to the ELISA 96-well plate and coat it overnight at 4°C; 2) Put the VHH- The Fc fusion protein was diluted to different concentrations and reacted with the antigen by ELISA, and the absorbance value at 450nm was measured with a microplate reader; the results are shown in Figure 1. The experimental results show that the BCMA Lead 1 VHH-FC fusion protein can bind to human BCMA antigen recombinant protein, and its EC 50 =4.2nM.
4、使用流式细胞仪,检测Lead 1 VHH-FC融合蛋白与BCMA过表达细胞株RPMI8226的亲和力:1)取0.3×10 6个RPMI8226细胞,用PBS洗涤2次,然后用100uL PBS重悬;2)与1ug/ml Lead 1 VHH-FC融合蛋白孵育1小时;3)PBS洗涤细胞3次后,用100uL PBS重悬细胞,加入0.2ug/ml的FITC标记的Anti-human FC抗体,孵育1小时;4)PBS洗涤细胞3次后,用300uL PBS重悬细胞,使用流式细胞仪检测荧光,结果见图2。实 验结果表明:BCMA Lead 1 VHH-FC融合蛋白能够结合RPMI8226细胞株,相对于空白细胞株,BCMA Lead 1 VHH-FC的结合曲线出现明显右移。 4. Using a flow cytometer, test the affinity of the Lead 1 VHH-FC fusion protein and the BCMA overexpression cell line RPMI8226: 1) Take 0.3×10 6 RPMI8226 cells, wash them twice with PBS, and then resuspend them in 100uL PBS; 2) Incubate with 1ug/ml Lead 1 VHH-FC fusion protein for 1 hour; 3) After washing the cells with PBS 3 times, resuspend the cells with 100uL PBS, add 0.2ug/ml FITC-labeled Anti-human FC antibody, and incubate 1 Hours; 4) After washing the cells with PBS 3 times, resuspend the cells with 300 uL PBS, and use a flow cytometer to detect the fluorescence. The result is shown in Figure 2. The experimental results show that the BCMA Lead 1 VHH-FC fusion protein can bind to the RPMI8226 cell line. Compared with the blank cell line, the binding curve of BCMA Lead 1 VHH-FC shifts to the right.
实施例6:BCMA CAR-T对多发性骨髓瘤(MM)治疗作用的研究Example 6: Study on the therapeutic effect of BCMA CAR-T on multiple myeloma (MM)
BCMA是治疗多发性骨髓瘤(MM)的重要靶点,使用BCMA Lead 1 VHH序列构建了CAR-T细胞,以研究BCMA Lead 1的VHH CAR-T对多发性骨髓瘤(MM)细胞的杀伤作用。BCMA is an important target for the treatment of multiple myeloma (MM). CAR-T cells were constructed using BCMA Lead 1 VHH sequence to study the killing effect of BCMA Lead 1 VHH CAR-T on multiple myeloma (MM) cells .
1、慢病毒载体的制备:1)基因合成BCMA lead 1VHH-CD8TM-4-1BB-CD3ζ融合基因序列(其氨基酸序列如SEQ ID NO:6所示,DNA序列如SEQ ID NO:5所示,其结构示意图见图3);2)使用同源重组或者酶切连接的方法将片段插入到PWPXLD-kana载体;将重组载体转化至大肠杆菌菌株Stbl3,经过卡那霉素筛选,对单克隆测序获得正确的重组质粒;然后扩大培养含重组质粒的宿主菌,使用去内毒素试剂盒获得无菌无内毒素质粒,即含CAR基因片段的PWPXLD质粒载体;3)同时将慢病毒包装辅助质粒psPax2和PMD2.0G分别转化DH5α,氨苄青霉素筛选,并提取质粒。1. Preparation of lentiviral vectors: 1) Gene synthesis BCMA lead 1VHH-CD8TM-4-1BB-CD3ζ fusion gene sequence (its amino acid sequence is shown in SEQ ID NO: 6, and the DNA sequence is shown in SEQ ID NO: 5. The schematic diagram of its structure is shown in Figure 3); 2) Use homologous recombination or restriction enzyme digestion to insert the fragment into the PWPXLD-kana vector; transform the recombinant vector into E. coli strain Stbl3, screen by kanamycin, and sequence the monoclonal Obtain the correct recombinant plasmid; then expand the culture of the host bacteria containing the recombinant plasmid, and use the endotoxin-removing kit to obtain a sterile endotoxin-free plasmid, that is, the PWPXLD plasmid vector containing the CAR gene fragment; 3) At the same time, the lentivirus packaging auxiliary plasmid psPax2 And PMD2.0G were transformed into DH5α, ampicillin screened, and plasmids were extracted.
2、CAR表达慢病毒(Lenti-CAR)的制备:1)接种3x10 6的293T细胞于培养皿中;2)24小时后,将病毒质粒(CAR-PWPXLD:9μg、psPax2:9μg、和PMD2.0G:4.5μg)混合,加入0.45mL的无菌水和50μL的 2.5M CaCl 2溶液,然后逐滴加入500μL 2×BBS(50mM BES,280mM NaCl,1.5mM Na 2HPO4),保持溶液涡旋混合;室温放置30分钟;然后将混合液加入到293T的培养基中,轻柔混匀;3)18小时后,将培养基更换为含2%FBS的DMEM培养基;4)48小时后收取培养基上清,离心除去细胞碎片,上清用0.45μm滤器过滤;然后加入三分之一体积的TAKARA慢病毒浓缩试剂(Lenti-X TM Concentrator,商品号631231),混匀后4℃静置过夜。4℃、1500g条件下离心45分钟,沉淀用PBS重悬,获得病毒液,分装后放于-80℃保存。 2, the CAR expressing lentivirus prepared (Lenti-CAR): 1) 3x10 6 293T cells were seeded in petri dishes; 2) after 24 hours, the viral plasmid (CAR-PWPXLD: 9μg, psPax2 : 9μg, and PMD2. 0G:4.5μg), add 0.45mL of sterile water and 50μL of 2.5M CaCl 2 solution, then add 500μL of 2×BBS (50mM BES, 280mM NaCl, 1.5mM Na 2 HPO4) dropwise, keep the solution vortex mixed ; Place at room temperature for 30 minutes; then add the mixture to the 293T medium and mix gently; 3) After 18 hours, change the medium to DMEM medium containing 2% FBS; 4) Collect the medium after 48 hours The supernatant was centrifuged to remove cell debris, and the supernatant was filtered with a 0.45 μm filter; then one-third volume of TAKARA Lentivirus Concentration Reagent (Lenti-X TM Concentrator, product number 631231) was added, and the mixture was mixed and allowed to stand overnight at 4°C. Centrifuge at 1500g for 45 minutes at 4°C, and resuspend the pellet in PBS to obtain the virus solution, which is aliquoted and stored at -80°C.
3、BCMA VHH CAR-T细胞的制备:1)在Day 0,采集外周血,分离淋巴细胞PBMC和血浆;从PBMC中分选出CD3+T细胞;调整细胞悬液至浓度1×10 6个/ml,置于12孔板中培养;加入dynabeads磁珠(Thermo Fisher),进行刺激;2)在Day 0,在 12孔板中,加入fibronectin溶液(5μg/cm 2),4℃包被过夜;3)在Day 1,弃除12孔板中fibronectin溶液,用2%BSA封闭30分钟;去除封闭液,按 750μL/4.5cm 2加入病毒液,置于37℃培养箱,静置4-6小时;收集刺激后的T细胞,取10 6个加 入每个孔中,置于37℃培养箱中,5%CO 2培养;4)在Day 3,调节T细胞浓度至5×10 5/ml,全部更换新鲜培养基;5)在Day 5,调节T细胞浓度至5×10 5/ml,用流式细胞仪检测CAR-T细胞CAR表达情况(图4)。 3. Preparation of BCMA VHH CAR-T cells: 1) On Day 0, collect peripheral blood, separate lymphocytes, PBMC and plasma; sort out CD3+ T cells from PBMC; adjust the cell suspension to a concentration of 1×10 6 cells /ml, culture in a 12-well plate; add dynabeads magnetic beads (Thermo Fisher) for stimulation; 2) On Day 0, add fibronectin solution (5μg/cm 2 ) to a 12-well plate and coat overnight at 4°C 3) On Day 1, discard the fibronectin solution in the 12-well plate, and block it with 2% BSA for 30 minutes; remove the blocking solution, add the virus solution at 750μL/4.5cm 2 and place it in the 37°C incubator, and let it stand for 4-6 hours; after stimulation of T cells were collected, taking 106 added to each well, placed in an incubator at 37 ℃, 5% CO 2 culture; 4) at Day 3, regulatory T cells to a concentration of 5 × 10 5 / ml , Replace all the fresh medium; 5) On Day 5, adjust the T cell concentration to 5×10 5 /ml, and use flow cytometry to detect the CAR expression of CAR-T cells (Figure 4).
4、LDH实验检测CAR-T对RPMI 8226细胞的体外杀伤作用:1)将BCMA高表达的RPMI 8226细胞或者BCMA低表达的K562、Raji细胞配置为2×10 5/mL,Day5的CAR-T细胞配置为4×10 5/mL;设置下列组别:空白组(200μL培养基)、自发组A(100μL CAR T细胞+100μL培养基)、自发组B(100μL靶细胞+100μL培养基)、实验组(100μL CAR T细胞+100μL靶细胞);另设置200μL培养基为体积校正组,靶细胞100μL+100μL培养基为最大释放组;分别置于96孔U型板中,置于37℃培养箱,5%CO 2孵育24小时;2)第二天,向最大释放组和体积校正组中每孔分别加入20微升LDH最大释放试剂,置于37℃培养箱,5%CO 2孵育45分钟,检测最大释放;3)同时,取ELISA检测 96孔板,避光加入LDH检测试剂50正组/孔;取出96孔U型板,混匀各孔,500g离心 3分钟,取50μL加入相对应的ELISA检测96孔板中;将ELISA检测96孔板放入酶标仪中,摇晃混匀30分钟;加入50μL终止试剂后,检测波长492nm;计算杀伤率,杀伤率=(实验组-自发组A-自发组B+空白组)/(最大释放值-体积校正值-自发组B+空白组);实验结果如图5,从图5可以明显看出,本发明的CAR-T可以对髓性白血病具有显著的疗效或抑制作用,对BCMA低表达的肿瘤细胞(K562和Raji)无显著的疗效或抑制作用。 4. LDH experiment detects the killing effect of CAR-T on RPMI 8226 cells in vitro: 1) Configure RPMI 8226 cells with high BCMA expression or K562 and Raji cells with low BCMA expression to 2×10 5 /mL, Day5 CAR-T The cell configuration is 4×10 5 /mL; set the following groups: blank group (200 μL medium), spontaneous group A (100 μL CAR T cells + 100 μL medium), spontaneous group B (100 μL target cells + 100 μL medium), Experimental group (100μL CAR T cells+100μL target cells); another set 200μL medium as the volume correction group, target cells 100μL+100μL medium as the maximum release group; placed in a 96-well U-shaped plate and cultured at 37℃ Incubate with 5% CO 2 for 24 hours; 2) On the second day, add 20 microliters of LDH maximum release reagent to each well in the maximum release group and volume correction group, place in a 37°C incubator, and incubate with 5% CO 2 for 45 3) At the same time, take an ELISA test 96-well plate, add 50 positive groups/well of LDH test reagent in the dark; take out the 96-well U-shaped plate, mix wells, centrifuge at 500g for 3 minutes, take 50μL and add phase Corresponding ELISA test 96-well plate; put the ELISA test 96-well plate into the microplate reader, shake and mix for 30 minutes; add 50μL stop reagent, detect the wavelength of 492nm; calculate the killing rate, the killing rate = (experimental group-spontaneous Group A-spontaneous group B+blank group)/(maximum release value-volume correction value-spontaneous group B+blank group); the experimental results are shown in Fig. 5. It can be clearly seen from Fig. 5 that the CAR-T of the present invention can treat medulla Leukemia has a significant curative effect or inhibitory effect, and has no significant curative effect or inhibitory effect on tumor cells with low BCMA expression (K562 and Raji).
5、动物试验检测CAR-T对RPMI 8226细胞的体内杀伤作用:购买周龄4-6周的B-NDG重度免疫缺陷小鼠,适应饲养环境一周后于前肢侧翼皮下接种2×10 6/只的RPMI 8226多发性骨髓瘤肿瘤细胞。观察测量肿瘤大小,3-4周后,肿瘤生长至80-100mm 3时,把小鼠随机分为6只一组,连续两天尾静脉注射体外培养7-8天的CAR-T细胞,每次给药量均为2×10 6/只。继续观察测量肿瘤大小,结果如图6所示,其中肿瘤大小计算方法=(1/2)*长径*短径的平方。从图6可以看出,本申请实施例中所制备的CAR-T对人多发性骨髓瘤、急性髓细胞白血病有特异性的显著疗效或抑制作用。 5. Animal experiments to detect the killing effect of CAR-T on RPMI 8226 cells in vivo: Purchase 4-6 weeks old B-NDG severe immunodeficiency mice, adapt to the breeding environment for one week and inoculate 2×10 6 subcutaneously on the forelimb flanks. RPMI 8226 multiple myeloma tumor cells. Observe and measure the tumor size. After 3-4 weeks, when the tumor grows to 80-100 mm 3 , the mice are randomly divided into 6 groups, and CAR-T cells cultured in vitro for 7-8 days are injected into the tail vein for two consecutive days. The dose of each dose was 2×10 6 /head. Continue to observe and measure the tumor size, and the results are shown in Figure 6, where the tumor size calculation method = (1/2) * long diameter * short diameter square. It can be seen from Figure 6 that the CAR-T prepared in the examples of this application has a specific and significant curative effect or inhibitory effect on human multiple myeloma and acute myeloid leukemia.
实施例7:BCMA-PE24重组免疫毒素(RITs)对RPMI 8226细胞的体外杀伤作用Example 7: In vitro killing effect of BCMA-PE24 recombinant immunotoxins (RITs) on RPMI 8226 cells
重组免疫毒素(RITs)是将具有高度特异性的单克隆抗体与具有强大杀伤作用的生物毒素分子连接而成的靶向生物药物。假单细胞杆菌外毒素(pseudomonas extoxin,PE)是常用的生物毒素之一,其中PE24仅保留了PE毒素的第三结构域(Domain III),因此在极大保留PE的毒性的同时降低了药物的免疫原性。之前的研究表明:利用BCMA单域抗体连接PE24制备的scFv-PE24RITs对多发性骨髓瘤细胞具有很强的杀伤能力(参见: https://academic.oup.com/abt/article/1/1/19/5076366)。将筛选获得的Lead 1 VHH序列与PE24融合表达,研究该重组免疫毒素对RPMI8226细胞的体外杀伤作用。 Recombinant immunotoxins (RITs) are targeted biopharmaceuticals formed by linking highly specific monoclonal antibodies with biotoxin molecules with powerful killing effects. Pseudomonas extoxin (PE) is one of the commonly used biological toxins, among which PE24 only retains the third domain (Domain III) of PE toxin, so it greatly retains the toxicity of PE while reducing the drug Immunogenicity. Previous studies have shown that scFv-PE24RITs prepared using BCMA single-domain antibodies linked to PE24 have strong killing ability on multiple myeloma cells (see: https://academic.oup.com/abt/article/1/1/ 19/5076366 ). The Lead 1 VHH sequence obtained by screening was fused and expressed with PE24 to study the in vitro killing effect of the recombinant immunotoxin on RPMI8226 cells.
1、人工合成BCMA lead1 VHH-PE24的DNA序列(SEQ ID NO:13,对应的氨基酸序列为:SEQ ID NO:14),之后使用同源重组或者酶切连接的方法,将片段插入到pet25b(+)原核表达载体中,并在C端引入his标签。1. Artificially synthesize the DNA sequence of BCMA lead1 VHH-PE24 (SEQ ID NO: 13, the corresponding amino acid sequence is: SEQ ID NO: 14), and then use homologous recombination or enzyme digestion and ligation methods to insert the fragment into pet25b( +) In the prokaryotic expression vector, and introduce his tag at the C-terminus.
2、将重组构建好的质粒转入rosetta2宿主菌中,在LB/Amp 100/Chl 15培养基中37℃过夜培养;第二天将过夜培养的细菌,按1:100转入LB/Amp 100/Chl 15培养基,37℃培养2-3小时,在OD 600=0.6-1时,加入1mm IPTG,25℃诱导表达过夜。 2. Transfer the recombinantly constructed plasmid into the rosetta2 host bacteria, and culture it overnight at 37°C in LB/Amp 100 /Chl 15 medium; the next day, transfer the bacteria cultured overnight to LB/Amp 100 at a ratio of 1:100 Chl 15 medium, cultured at 37°C for 2-3 hours, when OD 600 =0.6-1, 1mm IPTG was added, and expression was induced overnight at 25°C.
3、离心、收集菌体、PBS洗涤;菌体用10ml PBS重悬,超声破碎,收集上清;通过Ni柱吸附洗脱获得蛋白,SDS-PAGE电泳表明所获蛋白条带单一,位置正确。3. Centrifuge, collect the bacteria, and wash with PBS; resuspend the bacteria in 10ml PBS, sonicate and collect the supernatant; the protein is obtained by Ni column adsorption and elution. SDS-PAGE electrophoresis shows that the obtained protein has a single band and the position is correct.
4、按1×10 4/孔,将RPMI 8226细胞接种到96孔板中,同时加入BCMA VHH-PE24生物毒素蛋白,浓度为100ng/ml、30ng/ml、10ng/ml、3ng/ml、1ng/ml、0.3ng/ml、0.1ng/ml、和0ng/ml(空白);96小时后,使用CCK8检测试剂盒检测杀伤效果,结果如图7。结果表明,本申请实施例中所制备的BCMA lead1 VHH-PE24对人多发性骨髓瘤有特异性的显著疗效或抑制作用。 4. According to 1×10 4 /well, inoculate RPMI 8226 cells into a 96-well plate, and add BCMA VHH-PE24 biotoxin protein at the concentration of 100ng/ml, 30ng/ml, 10ng/ml, 3ng/ml, 1ng /ml, 0.3ng/ml, 0.1ng/ml, and 0ng/ml (blank); 96 hours later, CCK8 detection kit was used to detect the killing effect, and the results are shown in Figure 7. The results show that the BCMA lead1 VHH-PE24 prepared in the examples of this application has a specific and significant curative effect or inhibitory effect on human multiple myeloma.
以上所述仅为本发明的较佳实施例而已,并不用以限制本发明,凡在本发明的精神和原则之内,所作的任何修改、等同替换等,均应包含在本发明的保护范围之内。The foregoing descriptions are only preferred embodiments of the present invention and are not intended to limit the present invention. Any modification, equivalent replacement, etc. made within the spirit and principle of the present invention shall be included in the protection scope of the present invention. within.

Claims (23)

  1. 能结合人BCMA多肽的抗BCMA抗体或其抗原结合片段,其能竞争性结合SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一所示的单个重链可变区(VHH)所结合人BCMA表位,优选地,其包含如SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一所示的单个重链可变区(VHH)的重链互补决定区HCDR1、HCDR2和HCDR3或其人源化变体序列或其通过添加、缺失或替换1个、2个或3个氨基酸所衍生的HCDR1、HCDR2和HCDR3的变体,示例性地,所述HCDR1、HCDR2和HCDR3包含说明书表1中所示的HCDR1、HCDR2和HCDR3,优选地所述HCDR1、HCDR2和HCDR3包含:SEQ ID NO:10-12中任一项所示出的一种、两种或多种CDR;An anti-BCMA antibody or antigen-binding fragment thereof that can bind to human BCMA polypeptide, which can competitively bind to one of SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: 23-38 The human BCMA epitope bound by the single heavy chain variable region (VHH) shown, preferably, includes SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: 23-38 The heavy chain complementarity determining regions HCDR1, HCDR2, and HCDR3 of a single heavy chain variable region (VHH) shown in one of the sequences or humanized variant sequences thereof or by adding, deleting or replacing 1, 2, or 3 Variants of HCDR1, HCDR2 and HCDR3 derived from amino acids, for example, said HCDR1, HCDR2 and HCDR3 comprise HCDR1, HCDR2 and HCDR3 shown in Table 1 of the specification, preferably said HCDR1, HCDR2 and HCDR3 comprise: SEQ ID NO: one, two or more CDRs shown in any one of 10-12;
    SEQ ID NO:16-18中任一项所示出的一种、两种或多种CDR;或SEQ ID NO: one, two or more CDRs shown in any one of 16-18; or
    SEQ ID NO:20-22中任一项所示出的一种、两种或多种CDR。SEQ ID NO: One, two or more CDRs shown in any one of 20-22.
  2. 如权利要求1所述的抗体或抗原结合片段,其包含SEQ ID NO:2、SEQ ID NO:15或SEQ ID NO:19、或SEQ ID NO:23-38中之一所示的重链可变区序列或其人源化序列。The antibody or antigen-binding fragment of claim 1, which comprises the heavy chain shown in one of SEQ ID NO: 2, SEQ ID NO: 15 or SEQ ID NO: 19, or SEQ ID NO: 23-38. Variable region sequence or its humanized sequence.
  3. 如权利要求1或2所述的抗体或抗原结合片段,其选自骆驼Ig、Ig NAR、Fab片段、Fab’片段、F(ab)’ 2片段、F(ab)’ 3片段、Fv、scFv、双-scFv、(scFv) 2、微型抗体、双链抗体、三链抗体、四链抗体、二硫键稳定的Fv蛋白以及单结构域抗体(sdAb,纳米抗体)、双特异性抗体或三特异性抗体。 The antibody or antigen-binding fragment of claim 1 or 2, which is selected from camel Ig, Ig NAR, Fab fragment, Fab' fragment, F(ab)' 2 fragment, F(ab)' 3 fragment, Fv, scFv , Double-scFv, (scFv) 2 , mini-antibody, double-chain antibody, tri-chain antibody, four-chain antibody, disulfide bond stabilized Fv protein and single domain antibody (sdAb, Nanobody), bispecific antibody or three Specific antibodies.
  4. 融合蛋白,其包含权利要求1-3中任一项所述的抗体或抗原结合片段。A fusion protein comprising the antibody or antigen-binding fragment of any one of claims 1-3.
  5. 如权利要求4所述的融合蛋白,其还包含标签序列(例如Poly-His、Hemagglutinin、c-Myc、GST、Flag-tag等)或IgG1-Fc蛋白序列,或附加表位(如针对人BCMA的其他表位)或附加的抗体活性片段(如针对人BCMA的其他表位或相同表位的抗体或抗体活性片段,或能结合人BCMA的配体),优选地,所述融合蛋白具有SEQ ID NO:4所示的序列。The fusion protein of claim 4, which further comprises a tag sequence (such as Poly-His, Hemagglutinin, c-Myc, GST, Flag-tag, etc.) or an IgG1-Fc protein sequence, or an additional epitope (such as for human BCMA Other epitopes) or additional antibody active fragments (such as antibodies or antibody active fragments directed against other epitopes of human BCMA or the same epitope, or ligands capable of binding to human BCMA), preferably, the fusion protein has SEQ ID NO: the sequence shown in 4.
  6. 抗体-药物缀合物,其包含权利要求1-3中任一项所述的抗体或抗原结合片段,优选地,所述缀合物缀合了假单细胞杆菌外毒素(pseudomonas  extoxin,PE),更优选为PE24,最优选地,所述缀合物具有SEQ IDNO:14的序列。An antibody-drug conjugate comprising the antibody or antigen-binding fragment of any one of claims 1-3, preferably, the conjugate is conjugated with pseudomonas extoxin (PE) , More preferably PE24, and most preferably, the conjugate has the sequence of SEQ ID NO: 14.
  7. 如权利要求6所述的抗体-药物缀合物,其中所述的药物选自如下:放射性标记物、 32P、 35S、荧光染料、电子致密试剂、酶、生物素、链霉亲和素、洋地黄毒苷、半抗原、免疫原性蛋白质、具有与靶标互补的序列的核酸分子,或任何前述的组合;或免疫调节化合物、抗癌剂、抗病毒剂、抗菌剂、抗真菌剂和抗寄生虫剂,或任何前述的组合。 The antibody-drug conjugate of claim 6, wherein the drug is selected from the group consisting of radiolabels, 32 P, 35 S, fluorescent dyes, electron densification reagents, enzymes, biotin, streptavidin , Digoxigenin, hapten, immunogenic protein, nucleic acid molecule having a sequence complementary to the target, or any combination of the foregoing; or immunomodulatory compounds, anticancer agents, antiviral agents, antibacterial agents, antifungal agents and Antiparasitic agent, or any combination of the foregoing.
  8. 一种嵌合抗原受体(CAR),其包含:(1)包含权利要求1-3中任一项所述的抗体或抗原结合片段、包含权利要求4-5中任一项所述的融合蛋白或包含权利要求6-7中任一项所述的抗体-药物缀合物的胞外抗原结合域;任选地,所述嵌合抗原受体还包含(2)跨膜域;和(3)胞内信号传导域。A chimeric antigen receptor (CAR) comprising: (1) comprising the antibody or antigen-binding fragment according to any one of claims 1-3, and comprising the fusion according to any one of claims 4-5 A protein or an extracellular antigen binding domain comprising the antibody-drug conjugate of any one of claims 6-7; optionally, the chimeric antigen receptor further comprises (2) a transmembrane domain; and ( 3) Intracellular signal transduction domain.
  9. 根据权利要求8所述的CAR,其中所述跨膜域来源于选自由T细胞受体的α、β或ζ链、CD3ε、CD4、CD5、CD8、CD8α、CD9、CD16、CD22、CD28、CD33、CD37、CD45、CD80、CD86、CD134、CD137、CD152、CD154和ICOS组成的组中的一种或多种的跨膜结构域。The CAR according to claim 8, wherein the transmembrane domain is derived from α, β, or ζ chains selected from the group consisting of T cell receptors, CD3ε, CD4, CD5, CD8, CD8α, CD9, CD16, CD22, CD28, CD33 , CD37, CD45, CD80, CD86, CD134, CD137, CD152, CD154 and ICOS one or more transmembrane domains.
  10. 根据权利要求8所述的CAR,所述胞内信号转导域包含共刺激信号传导域且来自:CD2、CD3ζ、CD3γ、CD3δ、CD3ε、CD4、CD5、CD7、CD22、CD27、CD28、CD30、CD40、CD66d、CD79a、CD79b、CD83、CD134、CD137、ICOS、CD154、4-1BB和OX40、LFA-1、LIGHT、NKG2C和B7-H3中的一种或多种。The CAR according to claim 8, wherein the intracellular signal transduction domain comprises a costimulatory signal transduction domain and is derived from: CD2, CD3ζ, CD3γ, CD3δ, CD3ε, CD4, CD5, CD7, CD22, CD27, CD28, CD30, One or more of CD40, CD66d, CD79a, CD79b, CD83, CD134, CD137, ICOS, CD154, 4-1BB and OX40, LFA-1, LIGHT, NKG2C and B7-H3.
  11. 如权利要求8-10中任一项所述的CAR,还包含位于所述胞外抗原结合域的C-末端和所述跨膜域的N-末端之间的铰链域。The CAR of any one of claims 8-10, further comprising a hinge domain located between the C-terminus of the extracellular antigen binding domain and the N-terminus of the transmembrane domain.
  12. 如权利要求11所述的CAR,其中所述铰链域来源于CD8α。The CAR of claim 11, wherein the hinge domain is derived from CD8α.
  13. 如权利要求8-10中任一项所述的CAR,其中所述抗体或抗原结合片段如权利要求6或7限定的那样缀合了药物,或所述抗体或抗原结合片段进一步直接或间接(例如通过肽接头)连接能结合人BCMA的配体或抗体(例如针对人BCMA的单结构域抗体。The CAR according to any one of claims 8-10, wherein the antibody or antigen-binding fragment is conjugated with a drug as defined in claim 6 or 7, or the antibody or antigen-binding fragment is further directly or indirectly ( For example, a peptide linker is used to connect a ligand or antibody capable of binding to human BCMA (for example, a single domain antibody against human BCMA).
  14. 如权利要求8所述的CAR,其具有SEQ ID NO:6所示的序列。The CAR according to claim 8, which has the sequence shown in SEQ ID NO: 6.
  15. 编码权利要求1所述的抗体或其抗原结合片段、权利要求4所述的融合蛋白或权利要求8所述的CAR的多核苷酸,A polynucleotide encoding the antibody or antigen-binding fragment thereof of claim 1, the fusion protein of claim 4, or the CAR of claim 8,
    优选地,所述编码权利要求1所述的抗体或抗原结合片段的多核苷酸如SEQ ID NO:1所示或其简并序列或互补序列;Preferably, the polynucleotide encoding the antibody or antigen-binding fragment of claim 1 is shown in SEQ ID NO: 1 or its degenerate sequence or complementary sequence;
    所述编码权利要求4所述的融合蛋白的多核苷酸如SEQ ID NO:3所示或其简并序列或互补序列;或The polynucleotide encoding the fusion protein of claim 4 is shown in SEQ ID NO: 3 or its degenerate sequence or complementary sequence; or
    所述编码权利要求8所述的CAR的多核苷酸如SEQ ID NO:5所示或其简并序列或互补序列。The polynucleotide encoding the CAR of claim 8 is shown in SEQ ID NO: 5 or its degenerate sequence or complementary sequence.
  16. 分离的CAR-T细胞或CAR-NK细胞,其特征在于,所述CAR-T细胞或CAR-NK细胞能够表达权利要求1-3中任一项所述的抗体或其抗原结合片段;所述CAR-T细胞或CAR-NK细胞能够表达权利要求4-5中任一项所述的融合蛋白;所述CAR-T细胞或CAR-NK细胞能够表达权利要求6-7中任一项所述的抗体-药物缀合物;所述CAR-T细胞或CAR-NK细胞能够表达权利要求8-14中任一项所述的CAR;所述CAR-T细胞或CAR-NK细胞包含权利要求15中所述的多核苷酸。An isolated CAR-T cell or CAR-NK cell, characterized in that the CAR-T cell or CAR-NK cell can express the antibody or antigen-binding fragment thereof according to any one of claims 1 to 3; CAR-T cells or CAR-NK cells can express the fusion protein of any one of claims 4-5; the CAR-T cells or CAR-NK cells can express the fusion protein of any one of claims 6-7 The antibody-drug conjugate of; the CAR-T cell or CAR-NK cell can express the CAR of any one of claims 8-14; the CAR-T cell or CAR-NK cell comprises claim 15 The polynucleotide described in.
  17. 载体,其包含根据权利要求15所述的多核苷酸。A vector comprising the polynucleotide according to claim 15.
  18. 如权利要求17所述的载体,其中所述载体是表达载体,例如病毒载体,优选为逆转录病毒载体,例如慢病毒载体,优选为选自人免疫缺陷病毒1(HIV-1)、人免疫缺陷病毒2(HIV-2)、维斯纳-梅迪病毒(VMV)病毒、山羊关节炎-脑炎病毒(CAEV)、马传染性贫血病毒(EIAV)、猫免疫缺陷病毒(FIV)、牛免疫缺陷病毒(BIV)和猿猴免疫缺陷病毒(SIV)。The vector according to claim 17, wherein the vector is an expression vector, such as a viral vector, preferably a retroviral vector, such as a lentiviral vector, preferably selected from the group consisting of human immunodeficiency virus 1 (HIV-1), human immunodeficiency virus 1 (HIV-1), and human immunodeficiency virus 1 (HIV-1). Deficiency virus 2 (HIV-2), Wisner-Medie virus (VMV) virus, goat arthritis-encephalitis virus (CAEV), equine infectious anemia virus (EIAV), feline immunodeficiency virus (FIV), cattle Immunodeficiency virus (BIV) and Simian Immunodeficiency Virus (SIV).
  19. 免疫效应细胞,其包含权利要求8-14中任一项所述的CAR,或包含如权利要求15所述的多核苷酸或包含如权利要求17或18所述的载体。An immune effector cell, which comprises the CAR according to any one of claims 8-14, or comprises the polynucleotide according to claim 15, or comprises the vector according to claim 17 or 18.
  20. 如权利要求19所述的免疫效应细胞,其中所述免疫效应细胞为T淋巴细胞或自然杀伤细胞。The immune effector cell of claim 19, wherein the immune effector cell is a T lymphocyte or a natural killer cell.
  21. 药物组合物,其包含权利要求1-3中任一项所述的抗体或其抗原结合片段,包含权利要求4-5中任一项所述的融合蛋白,包含权利要求6-7中任一项所述的抗体-药物缀合物,包含如权利要求16所述的CAR-T细胞或CAR-NK细胞,或包含权利要求19或20所述的免疫效应细胞,以及任选地,药学上可接受的载体。A pharmaceutical composition comprising the antibody or antigen-binding fragment thereof according to any one of claims 1-3, comprising the fusion protein according to any one of claims 4-5, and comprising any one of claims 6-7 The antibody-drug conjugate according to item 1 comprises the CAR-T cell or CAR-NK cell according to claim 16, or comprises the immune effector cell according to claim 19 or 20, and optionally, pharmaceutically Acceptable carrier.
  22. 制备权利要求16所述的CAR-T细胞或CAR-NK细胞,或包含权利要求19或20所述的免疫效应细胞的方法,其包括将权利要求17或18的载体引入至T淋巴细胞或自然杀伤细胞。A method for preparing the CAR-T cell or CAR-NK cell according to claim 16, or comprising the immune effector cell according to claim 19 or 20, which comprises introducing the vector of claim 17 or 18 into T lymphocytes or natural Killer cells.
  23. 权利要求1-3中任一项所述的抗体或其抗原结合片段,权利要求4-5中任一项所述的融合蛋白,权利要求6-7中任一项所述的抗体-药物缀合物,表达权利要求8-14中任一项所述的CAR,或权利要求16所述的CAR-T细胞或CAR-NK细胞,或权利要求19或20所述的免疫效应细胞在制备治疗和/或预防癌症的药物中的用途,示例性地,所述癌症为多发性骨髓瘤和急性髓细胞性白血病,优选为复发性多发性骨髓瘤。The antibody or antigen-binding fragment thereof according to any one of claims 1-3, the fusion protein according to any one of claims 4-5, the antibody-drug conjugate according to any one of claims 6-7 The compound expressing the CAR according to any one of claims 8-14, or the CAR-T cell or CAR-NK cell according to claim 16, or the immune effector cell according to claim 19 or 20 in the preparation of therapeutic And/or the use in drugs for preventing cancer, exemplarily, the cancer is multiple myeloma and acute myeloid leukemia, preferably recurrent multiple myeloma.
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