WO2020215844A1 - Product for screening lrpprc regulators and method for identifying lrpprc regulators - Google Patents

Product for screening lrpprc regulators and method for identifying lrpprc regulators Download PDF

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WO2020215844A1
WO2020215844A1 PCT/CN2020/072663 CN2020072663W WO2020215844A1 WO 2020215844 A1 WO2020215844 A1 WO 2020215844A1 CN 2020072663 W CN2020072663 W CN 2020072663W WO 2020215844 A1 WO2020215844 A1 WO 2020215844A1
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lrpprc
nucleic acid
protein
screening
aptamer
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方晓红
周卫
徐丽
张振
赵立波
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中国科学院化学研究所
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    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/531Production of immunochemical test materials
    • G01N33/532Production of labelled immunochemicals
    • G01N33/533Production of labelled immunochemicals with fluorescent label
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/53Immunoassay; Biospecific binding assay; Materials therefor
    • G01N33/531Production of immunochemical test materials
    • G01N33/532Production of labelled immunochemicals
    • G01N33/535Production of labelled immunochemicals with enzyme label or co-enzymes, co-factors, enzyme inhibitors or enzyme substrates
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6854Immunoglobulins
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • G01N2021/6439Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" with indicators, stains, dyes, tags, labels, marks

Abstract

Disclosed are a product for screening LRPPRC regulators and a method for identifying LRPPRC regulators, which product comprises a kit and a device, wherein the kit comprises a recombinant LRPPRC protein, GST protein, fluorescein-labeled aptamer, R14 and fluorescein-labeled control nucleic acid; and the device comprises a multi-hole plate and a fluorescence polarization signal detector. A short aptamer is used, which aptamer, in comparison with naturally occurring RNA and DNA sequences, has a shorter sequence and smaller molecular weight, which ensures that a polarization signal detection window is sufficiently large in a screening process, and a detection signal-to-noise ratio is successfully ensured; fine crystal structure analysis of the target protein is not needed in advance, which can greatly reduce a drug screening threshold; and the screening method has good universality for nucleic acid binding proteins and is easy to popularize.

Description

用于筛选LRPPRC调控剂的产品及鉴定LRPPRC调控剂的方法Products for screening LRPPRC regulators and methods for identifying LRPPRC regulators 技术领域Technical field
本发明实施例涉及生物医药领域,特别涉及一种用于筛选LRPPRC调控剂的产品及鉴定LRPPRC调控剂的方法。The embodiment of the present invention relates to the field of biomedicine, in particular to a product for screening LRPPRC modulators and a method for identifying LRPPRC modulators.
背景技术Background technique
分子靶向治疗是现阶段疾病治疗的理论基础,包括肿瘤、心血管系统、神经系统疾病都急切需要临床可用的特异性分子抑制剂。现阶段,针对蛋白靶点的药物设计开发主要局限在以下两方面:第一主要针对具有激酶活性的生物进行药物开发,开发的靶向性药物也主要以抑制蛋白的酶活性为主,如癌症治疗中的吉非替尼抑制EGFR激酶活性、达沙替尼抑制SRC激酶活性、心血管系统他汀类药物抑制HMG-CoA还原酶活性等等。然而细胞内真正具有酶活性的蛋白质种类只占蛋白总数的很少比例,并且能作为药物靶点的蛋白酶类则更少了。第二针对蛋白酶类的酶活性抑制剂设计筛选极度依赖于对蛋白结构的理解基础,在缺少蛋白晶体结构的前提下,蛋白抑制剂的筛选将面临极大的挑战。因此,亟需针对更多的、尤其是非酶类的蛋白靶点开发有效的药物筛选体系,来提高分子靶向治疗的效率。Molecular targeted therapy is the theoretical basis for the treatment of diseases at this stage, including tumors, cardiovascular system, and nervous system diseases, which urgently need clinically available specific molecular inhibitors. At this stage, drug design and development for protein targets are mainly limited to the following two aspects: First, drug development is mainly for organisms with kinase activity, and targeted drugs developed are mainly to inhibit protein enzyme activity, such as cancer. In treatment, gefitinib inhibits EGFR kinase activity, dasatinib inhibits SRC kinase activity, cardiovascular statins inhibit HMG-CoA reductase activity and so on. However, the types of proteins with enzymatic activity in cells account for only a small percentage of the total number of proteins, and there are fewer proteases that can be used as drug targets. Second, the design and screening of enzyme activity inhibitors for proteases is extremely dependent on the understanding of protein structure. In the absence of protein crystal structure, the screening of protein inhibitors will face great challenges. Therefore, there is an urgent need to develop effective drug screening systems for more protein targets, especially non-enzymes, to improve the efficiency of molecular targeted therapy.
核酸结合蛋白是一类可以特异性的和核酸结合的一个蛋白家族,根据结合的核酸类型可分为RNA结合蛋白和DNA结合蛋白。该类蛋白质一般具有保守的核酸结合域,该结构域可以选择性的与具有特定碱基序列的RNA或者DNA结合。现已经证实,核酸结合蛋白在DNA复制、DNA损伤修复、基因转录、蛋白翻译等几乎所有的生命活动过程中发挥着至关重要的作用,在诸如恶性肿瘤、心脑血管疾病、传染性疾病等人类生命健康相关的疾病中起着不可或缺的作用。以RNA结合蛋白LRPPRC为例,要想筛选到能阻断LRPPRC与RNA结合的小分子调控剂,需要知道LRPPRC结合的核酸特征,也就是保守的结合功能域(motif),但是很多时候无法知晓绝大部分的LRPPRC结合RNA的motif,即使已知LRPPRC结合mRNA的motif,体外转录、回收获得RNA也存在很复杂的操作流程,并且RNA容易降解,容易导致系统不稳定。因此亟需提供一种更稳定、更通用、更灵敏的鉴定LRPPRC调控剂的方法。Nucleic acid binding proteins are a family of proteins that can specifically bind to nucleic acids, and can be divided into RNA binding proteins and DNA binding proteins according to the type of nucleic acid that is bound. This type of protein generally has a conserved nucleic acid binding domain, which can selectively bind to RNA or DNA with a specific base sequence. It has now been confirmed that nucleic acid binding proteins play a vital role in almost all life activities such as DNA replication, DNA damage repair, gene transcription, protein translation, etc., such as malignant tumors, cardiovascular and cerebrovascular diseases, infectious diseases, etc. It plays an indispensable role in diseases related to human life and health. Take the RNA-binding protein LRPPRC as an example. If you want to screen for small molecule regulators that can block the binding of LRPPRC to RNA, you need to know the nucleic acid characteristics of LRPPRC binding, that is, the conserved binding domain (motif), but it is often impossible to know the absolute Most LRPPRC bind RNA motifs, even if LRPPRC is known to bind mRNA motifs, there are complicated procedures for in vitro transcription and recovery of RNA, and RNA is easily degraded, which can easily lead to system instability. Therefore, there is an urgent need to provide a more stable, versatile, and sensitive method for identifying LRPPRC modulators.
发明内容Summary of the invention
本发明实施方式的目的在于提供一种用于筛选LRPPRC调控剂的产品及鉴定LRPPRC调控剂的方法,提供了一种更稳定、更通用、更灵敏的以核酸结合蛋白为靶点的鉴定LRPPRC调控剂的方法。The purpose of the embodiments of the present invention is to provide a product for screening LRPPRC modulators and a method for identifying LRPPRC modulators, and to provide a more stable, versatile and sensitive nucleic acid binding protein as a target to identify LRPPRC modulators. Agent method.
为解决上述技术问题,本发明提供了一种用于筛选LRPPRC调控剂的产品,包括试剂盒和装置,所述试剂盒包括重组LRPPRC蛋白、GST蛋白、荧光素标记的核酸适配体R14、以及荧光素标记的对照核酸;所述装置包括多孔板和荧光偏振信号检测仪。In order to solve the above technical problems, the present invention provides a product for screening LRPPRC modulators, including a kit and a device. The kit includes recombinant LRPPRC protein, GST protein, fluorescein-labeled nucleic acid aptamer R14, and Fluorescein-labeled control nucleic acid; the device includes a multi-well plate and a fluorescence polarization signal detector.
进一步,所述重组LRPPRC的浓度与GST蛋白浓度相同,均为14-136μg/mL,优选68-120μg/mL。Further, the concentration of the recombinant LRPPRC is the same as the GST protein concentration, both 14-136 μg/mL, preferably 68-120 μg/mL.
进一步,所述核酸适配体R14的序列为GGTGGGTGGGTTGGGTGG,所述对照核酸的序列为AATTTTTTAATTATTTATATTA;所述荧光标记的核酸适配体R14与荧光标记的对照核酸浓度相同,储备液浓度均为100nM,工作液浓度均为10 -8M。 Further, the sequence of the nucleic acid aptamer R14 is GGTGGGTGGGTTGGGTGG, the sequence of the control nucleic acid is AATTTTTTAATTATTTATATTA; the concentration of the fluorescently labeled nucleic acid aptamer R14 is the same as that of the fluorescently labeled control nucleic acid, and the concentration of the stock solution is both 100 nM, The liquid concentration is 10 -8 M.
进一步,所述荧光偏振信号检测仪是酶标仪,优选Infinite M1000 PRO plate reader酶标仪。Further, the fluorescence polarization signal detector is a microplate reader, preferably an Infinite M1000 PRO plate reader.
进一步,所述产品用于筛选LRPPRC蛋白负调控剂或C端结合剂。Further, the product is used for screening LRPPRC protein negative regulators or C-terminal binding agents.
本发明还提供一种基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,包括:The present invention also provides a method for identifying LRPPRC modulators based on fluorescence polarization signal detection, which includes:
1)原核表达纯化LRPPRC蛋白和GST蛋白;1) Prokaryotic expression and purification of LRPPRC protein and GST protein;
2)合成荧光素标记的核酸适配体R14和荧光标记对照核酸,所述对照核酸的序列为AATTTTTTAATTATTTATATTA;2) Synthesis of fluorescein-labeled nucleic acid aptamer R14 and fluorescent-labeled control nucleic acid, the sequence of the control nucleic acid is AATTTTTTAATTATTTATATTA;
3)分别将LRPPRC蛋白与荧光标记的核酸适配体R14混合、将LRPPRC蛋白与荧光标记对照核酸混合、将荧光标记的核酸适配体R14与GST混合,加入多孔板中不同的孔中;3) Mix LRPPRC protein with fluorescently labeled nucleic acid aptamer R14, mix LRPPRC protein with fluorescently labeled control nucleic acid, and mix fluorescently labeled nucleic acid aptamer R14 with GST, and add them to different wells in the multiwell plate;
4)向各孔中加入候选分子;4) Add candidate molecules to each well;
5)以荧光偏振信号检测仪检测步骤3)中各混合物的荧光偏振信号。5) Detect the fluorescence polarization signal of each mixture in step 3) with a fluorescence polarization signal detector.
进一步,所述步骤3)还包括DMSO空白对照。Further, the step 3) also includes a DMSO blank control.
进一步,所述LRPPRC、GST的反应浓度均为120μg/mL,所述荧光标记的核酸适配体R14、荧光标记对照核酸的反应浓度均为40nM;所述候选分子的工作浓度为24μM。Further, the reaction concentration of the LRPPRC and GST are both 120 μg/mL, the reaction concentration of the fluorescently labeled nucleic acid aptamer R14 and the fluorescently labeled control nucleic acid are both 40 nM; the working concentration of the candidate molecule is 24 μM.
进一步,本发明所述方法还包括采集所述孔板上每个孔的荧光信号以及偏振光信号;与DMSO孔的信号进行归一化处理,加入小分子化合物后,所述孔的偏振光信号的抑制率大于50%;且荧光信号自身的变化小于1.5倍的小分子化合物,即为LRPPRC负调控剂。Further, the method of the present invention also includes collecting the fluorescent signal and the polarized light signal of each hole of the orifice plate; normalizing the signal of the DMSO hole, and adding the small molecule compound, the polarized light signal of the hole The inhibition rate of LRPPRC is greater than 50%; and the small molecule compound whose fluorescence signal itself changes less than 1.5 times is a negative regulator of LRPPRC.
进一步,本发明所述方法为高通量筛选方法。Furthermore, the method of the present invention is a high-throughput screening method.
本发明实施方式相对于现有技术而言,通过SELEX筛选,可以在不知晓RNA结合的motif前提下,得到与LRPPRC结合蛋白特异性结合的核酸适配体,将得到的核酸适配体进行荧光素标记与LRPPRC结合蛋白相互作用形成核酸-蛋白复合物,此时处于高偏振光信号状态,将小分子化合物添加到核酸-蛋白复合物体系中,能够阻断蛋白核酸结合功能的化合物可以将荧光标记的核酸适配体从蛋白上解离,处于低偏振光信号状态,由于核酸适配体碱基数量更少,分子量更小,根据偏振光检测原理,分子量越小的情况下,偏振光变化会更显著,根据偏振光信号的抑制率大于50%;且荧光信号自身的变化小于1.5倍的筛选条件得到符合条件的LRPPRC负调控剂。Compared with the prior art, the embodiment of the present invention can obtain nucleic acid aptamers that specifically bind to the LRPPRC binding protein through SELEX screening without knowing the motif of RNA binding, and perform fluorescence on the obtained nucleic acid aptamers. The protein label interacts with the LRPPRC binding protein to form a nucleic acid-protein complex. At this time, it is in a state of high polarized light signal. Adding small molecule compounds to the nucleic acid-protein complex system can block the protein nucleic acid binding function. The labeled nucleic acid aptamer is dissociated from the protein and is in a state of low polarized light signal. Since the number of bases of the nucleic acid aptamer is smaller, the molecular weight is smaller. According to the principle of polarized light detection, the smaller the molecular weight, the polarization changes It will be more significant, according to the inhibition rate of the polarized light signal is greater than 50%; and the change of the fluorescence signal itself is less than 1.5 times the screening conditions to obtain qualified LRPPRC negative regulator.
附图说明Description of the drawings
一个或多个实施例通过与之对应的附图中的图片进行示例性说明,这些示例性说明并不构成对实施例的限定,附图中具有相同参考数字标号的元件表示为类似的元件,除非有特别申明,附图中的图不构成比例限制。One or more embodiments are exemplified by the pictures in the corresponding drawings. These exemplified descriptions do not constitute a limitation on the embodiments. Elements with the same reference numbers in the drawings are represented as similar elements. Unless otherwise stated, the figures in the attached drawings do not constitute a limitation of scale.
图1是本发明实施例1中采用western blot检测各条核酸适配体序列富集到的LRPPRC、Actin的蛋白水平;Fig. 1 shows the protein levels of LRPPRC and Actin enriched in various nucleic acid aptamer sequences using western blot in Example 1 of the present invention;
图2是本发明实施例2中5个LRPPRC片段;Figure 2 shows five LRPPRC fragments in embodiment 2 of the present invention;
图3是本发明实施例2中采用western blot检测各条核酸适配体序列富集到的GST标签;Fig. 3 shows the GST tags enriched in each nucleic acid aptamer sequence detected by western blot in Example 2 of the present invention;
图4是本发明实施例3中各个反应体系的偏振信号值与浓度反应曲线;4 is a response curve of polarization signal value and concentration of each reaction system in Example 3 of the present invention;
图5是本发明实施例3中各个LRPPRC蛋白浓度梯度下的信噪比S/N以及Z因子值;FIG. 5 is the S/N ratio and Z factor value of each LRPPRC protein concentration gradient in Example 3 of the present invention;
图6是本发明实施例4中850种小分子化合物抑制LRPPRC与核酸结合的效果图;Fig. 6 is a graph showing the effect of 850 small molecule compounds in inhibiting the binding of LRPPRC to nucleic acid in Example 4 of the present invention;
图7是本发明实施例4中20种候选小分子化合物偏振光抑制率示意图;Figure 7 is a schematic diagram of the polarization inhibition rate of 20 candidate small molecule compounds in Example 4 of the present invention;
图8是本发明实施例5中不同GAA浓度下LRPPRC蛋白的荧光光谱变化曲线;Fig. 8 is a change curve of the fluorescence spectrum of LRPPRC protein under different GAA concentrations in Example 5 of the present invention;
图9是本发明实施例5中不同GAA浓度下GAA与LRPPRC的混合后温度变化曲线;9 is a temperature change curve of GAA and LRPPRC after mixing at different GAA concentrations in Example 5 of the present invention;
图10是本发明实施例6中不同GAA浓度、不同时间下LRPPRC蛋白的变化趋势图;Figure 10 is a graph showing the change trend of LRPPRC protein at different GAA concentrations and at different times in Example 6 of the present invention;
图11是本发明实施例6中不同化合物处理肿瘤细胞后,肿瘤细胞中CDK6的mRNA的富集量。Fig. 11 shows the enrichment of CDK6 mRNA in tumor cells after treatment with different compounds in Example 6 of the present invention.
具体实施方式Detailed ways
为使本发明实施例的目的、技术方案和优点更加清楚,下面将结合附图对本发明的各实施方式进行详细的阐述。然而,本领域的普通技术人员可以理解,在本发明各实施例中,为了使读者更好地理解本申请而提出了许多技术细节。但是,即使没有这些技术细节和基于以下各实施方式的种种变化和修改,也可以实现本申请所要求保护的技术方案。In order to make the objectives, technical solutions, and advantages of the embodiments of the present invention clearer, the following describes the embodiments of the present invention in detail with reference to the accompanying drawings. However, a person of ordinary skill in the art can understand that in each embodiment of the present invention, many technical details are proposed for the reader to better understand the present application. However, even without these technical details and various changes and modifications based on the following embodiments, the technical solution claimed in this application can be realized.
核酸适配体是在体外通过SELEX(Systematic Evolution of Ligands by Exponential Enrichment)方法筛选到可以与给定的特定靶标的特异性结合的寡核苷酸片段。该类核酸适配体具有分子量小、特异性强、结合能力大等多重优势,近年来逐渐在分子分析、生物表征、药物递送等领域显示明显的优势。Nucleic acid aptamers are selected in vitro by SELEX (Systematic Evolution of Ligands by Exponential Enrichment) to find oligonucleotide fragments that can specifically bind to a given specific target. Such nucleic acid aptamers have multiple advantages such as small molecular weight, strong specificity, and large binding capacity. In recent years, they have gradually shown obvious advantages in the fields of molecular analysis, biological characterization, and drug delivery.
荧光偏振检测是分析化学领域一种经典的分析方法,是表征分子与分子相互作用的基本手段。该方法的基本原理是其基本原理是荧光物质经单一平面的偏振光照射后,吸收光能跃入激发态,随后回复至基态,并发出单一平面的偏振荧光。偏振荧光的强弱程度与荧光分子的大小呈正相关,与其受激发时转动的速度呈反相关。小分子大小的荧光分子的偏振信号较弱,当小分子荧光物质与大分子物质相互结合后,整体分子量急剧增加,分子振动变慢,偏振信号显著增加。理论上荧光标记的核酸适配体在与大分子量的靶标蛋白结合后会有偏振光的变化,然而,现阶段仍然没有将核酸适配体筛选与偏振光检测组合用于高通量药物筛选的报道。Fluorescence polarization detection is a classic analysis method in the field of analytical chemistry, and it is a basic means to characterize the interaction between molecules. The basic principle of this method is that the fluorescent substance is irradiated with a single plane of polarized light, and absorbs light energy to jump into an excited state, then return to the ground state, and emit a single plane of polarized fluorescence. The intensity of polarized fluorescence is positively correlated with the size of fluorescent molecules, and is inversely correlated with the speed of rotation when excited. The polarization signal of small-molecule fluorescent molecules is weak. When the small-molecule fluorescent substance and the macromolecular substance are combined with each other, the overall molecular weight increases sharply, the molecular vibration becomes slower, and the polarization signal increases significantly. Theoretically, fluorescently labeled nucleic acid aptamers will change in polarized light after binding to large molecular weight target proteins. However, at this stage, there is still no combination of nucleic acid aptamer screening and polarized light detection for high-throughput drug screening. Report.
实施例1Example 1
验证核酸适配体R14与LRPPRC的特异性结合Verify the specific binding of aptamer R14 to LRPPRC
免疫共沉淀法证明LRPPRC蛋白与核酸适配体R14特异性结合Co-immunoprecipitation proved that LRPPRC protein specifically binds to aptamer R14
1)离心收集细胞,裂解后12000g离心收集细胞裂解液;1) Collect the cells by centrifugation, and collect the cell lysate by centrifugation at 12000g after lysis;
2)合成生物素标记的AS1411以及R14,AS1411是已报道的特异性结合蛋白质核仁素的2) Synthetic biotin-labeled AS1411 and R14, AS1411 is a reported specific binding protein nucleolin
核酸适配体;R14是通过LRPPRC蛋白筛选得到的核酸适配体,其中R14:Nucleic acid aptamer; R14 is a nucleic acid aptamer obtained through LRPPRC protein screening, where R14:
GGTGGGTGGGTTGGGTGG;GGTGGGTGGGTTGGGTGG;
AS1411:GGTGGTGGTGGTTGTGGTGGTGGTGG),加水溶解,配成100nM的储存液体;AS1411: GGTGGTGGTGGTTGTGGTGGTGGTGG), dissolve in water, and make a 100nM storage liquid;
3)用含5mM MgCl 2的PBS配置蛋白-核酸适配体的混合物,蛋白500ug,核酸适配体200pm,终体积1ml; 3) Prepare a protein-nucleic acid aptamer mixture with PBS containing 5mM MgCl 2 , protein 500ug, nucleic acid aptamer 200pm, final volume 1ml;
4)蛋白-核酸适配体的混合物室温作用30min后,加入50ul链霉亲和素包被的beads回收生物素标记的核酸适配体-蛋白复合物;4) After the protein-nucleic acid aptamer mixture is exposed to room temperature for 30 minutes, add 50ul streptavidin-coated beads to recover the biotin-labeled nucleic acid aptamer-protein complex;
5)将获得的的适配体-蛋白复合物用PBS洗涤三次后,加入30ul蛋白电泳上样缓冲液, 沸水浴5min;5) After washing the obtained aptamer-protein complex three times with PBS, add 30ul protein electrophoresis loading buffer, and boil it in a boiling water bath for 5 minutes;
6)采用western blot检测各条核酸适配体序列富集到的LRPPRC、Actin的蛋白水平,具体如图1所示,由图1可知,核酸适配体R14可以很好的与LRPPRC蛋白结合。6) Western blot was used to detect the protein levels of LRPPRC and Actin enriched by each nucleic acid aptamer sequence, as shown in Figure 1. From Figure 1, it can be seen that the nucleic acid aptamer R14 can bind to the LRPPRC protein well.
实施例2Example 2
LRPPRC蛋白片段化,证明核酸适配体R14结合在LRPPRC蛋白的C末端Fragmentation of LRPPRC protein, proving that aptamer R14 binds to the C-terminus of LRPPRC protein
1)根据LPRRC蛋白的序列特征,将LRPPRC设计切割成5个片段,分别记为LRP1-LRP5,具体如图2所示;1) According to the sequence characteristics of the LPRRC protein, cut the LRPPRC design into 5 fragments, which are respectively marked as LRP1-LRP5, as shown in Figure 2;
2)将所有的LRPPRC片段整合到GST表达质粒上,大肠杆菌中进行原核表达纯化,将得到的LRPPRC原核表达蛋白溶解在PBS中;2) Integrate all the LRPPRC fragments into the GST expression plasmid, perform prokaryotic expression and purification in E. coli, and dissolve the obtained LRPPRC prokaryotic expression protein in PBS;
3)配置LRPPRC片段化蛋白-生物素标记R14的混合物,蛋白片段100ug,生物素标记R14为200pmol,终体积1ml;3) Configure the LRPPRC fragmented protein-biotin-labeled R14 mixture, the protein fragment is 100ug, the biotin-labeled R14 is 200pmol, and the final volume is 1ml;
4)LRPPRC片段蛋白-R14的混合物室温作用30min后,加入50ul链霉亲和素包被的beads回收生物素标记的R14-LRPPRC片段蛋白复合物;4) After the mixture of LRPPRC fragment protein-R14 acts at room temperature for 30 minutes, add 50ul streptavidin-coated beads to recover the biotin-labeled R14-LRPPRC fragment protein complex;
5)将获得的R14-LRPPRC片段蛋白复合物用PBS洗涤三次后,加入30ul蛋白电泳上样缓冲液,沸水浴5min;5) After washing the obtained R14-LRPPRC fragment protein complex with PBS for three times, add 30ul protein electrophoresis loading buffer, and bath in boiling water for 5 minutes;
6)采用western blot检测各条核酸适配体序列富集到的GST标签,实验结果如图3所示,在LRPPRC片段蛋白6中(LRP6)检测到GST标签,而其他的片段蛋白中没检测到GST标签,说明只有LRPPRC蛋白片段LRP6跟R14有结合,即核酸适配体R14与LRPPRC的C末端结合。6) Western blot was used to detect the GST tags enriched in each aptamer sequence. The experimental results are shown in Figure 3. The GST tag was detected in LRPPRC fragment protein 6 (LRP6), but not in other fragment proteins. The GST tag indicates that only the LRPPRC protein fragment LRP6 binds to R14, that is, the aptamer R14 binds to the C-terminus of LRPPRC.
实施例3Example 3
为了验证核酸适配体-LRPPRC蛋白偏振筛选体系是否适用高通量药物筛选体系,本实施例分别通过以下两个方面进行验证:In order to verify whether the nucleic acid aptamer-LRPPRC protein polarization screening system is suitable for a high-throughput drug screening system, this example was verified through the following two aspects:
一):筛选系统特异性验证One): specific verification of screening system
对核酸进行FITC标记后,验证系统的特异性After FITC labeling nucleic acid, the specificity of the system is verified
1)原核表达纯化LRPPRC蛋白,GST蛋白作为对照蛋白,BCA法进行定量;1) Prokaryotic expression and purification of LRPPRC protein, GST protein as control protein, and BCA method for quantification;
2)合成荧光素标记(包括但不限于HEX、CY3、CY5等荧光标记方法)的LRPPRC特异性核酸适配体Aptamer(R14,GGTGGGTGGGTTGGGTGG)以及无关对照序列(control DNA,AATTTTTTAATTATTTATATTA),配置成100nM的储备液;2) Synthesize fluorescein-labeled (including but not limited to HEX, CY3, CY5 and other fluorescent labeling methods) LRPPRC specific nucleic acid aptamer Aptamer (R14, GGTGGGTGGGTTGGGTGG) and irrelevant control sequence (control DNA, AATTTTTTAATTATTTATATTA), configured to 100nM Stock solution
2)配置蛋白与核酸序列的复合物,LRPPRC特异性核酸适配体及无关对照序列浓度都为10 -8M,GST空载蛋白或者LRPPRC蛋白浓度梯度为(0,7,14,34,68,136ug/ml),室温 放置30min; 2) Configure the complex of protein and nucleic acid sequence, the concentration of LRPPRC specific nucleic acid aptamer and irrelevant control sequence are both 10 -8 M, and the concentration gradient of GST empty protein or LRPPRC protein is (0,7,14,34,68 , 136ug/ml), placed at room temperature for 30min;
3)30min后,用Infinite M1000 PRO plate reader(Tecan,Switzerland)酶标仪检测各个反应体系的偏振信号值;3) After 30 minutes, use Infinite M1000 PRO plate reader (Tecan, Switzerland) to detect the polarization signal value of each reaction system;
4)根据各个反应体系的偏振信号值绘制浓度反应曲线,具体如图4所示。4) Draw a concentration response curve according to the polarization signal value of each reaction system, as shown in Figure 4.
由图4可知,核酸适配体R14与LRPPRC蛋白结合后偏振信号可达将近300mp,大大高于其他报道的核酸-蛋白结合的偏振信号,该优势是因为用到的核酸适配体片段小,分子量小。同时R14与GST对照蛋白结合、对照序列RTT与LRPPRC结合的偏振信号都显著低于R14与LRPPRC蛋白结合的。充分筛选过程中核酸与蛋白结合的特异性。It can be seen from Figure 4 that the polarized signal of the nucleic acid aptamer R14 combined with the LRPPRC protein can reach nearly 300mp, which is much higher than the polarized signal of other nucleic acid-protein binding reports. This advantage is due to the small fragment of the nucleic acid aptamer used. The molecular weight is small. At the same time, the polarization signals of the binding of R14 and GST control protein and the binding of control sequence RTT and LRPPRC were significantly lower than that of R14 and LRPPRC protein. Fully screen the specificity of nucleic acid and protein binding.
二):筛选体系高通量筛选适应性验证Two): High-throughput screening adaptability verification of screening system
测定整个反应体系的信噪比与Z因子变异区间,评判筛选体系是不是适用于高通量筛选Determine the signal-to-noise ratio and the Z-factor variation interval of the entire reaction system to judge whether the screening system is suitable for high-throughput screening
1)原核表达纯化LRPPRC蛋白,BCA法进行定量;1) Prokaryotic expression and purification of LRPPRC protein, and BCA method for quantification;
2)合成荧光素标记(包括但不限于HEX、CY3、CY5等荧光标记方法)的LRPPRC特异性核酸适配体Aptamer(R14,GGTGGGTGGGTTGGGTGG)配置成100nM的储备液;2) Synthetic fluorescein-labeled (including but not limited to HEX, CY3, CY5 and other fluorescent labeling methods) LRPPRC specific nucleic acid aptamer Aptamer (R14, GGTGGGTGGGTTGGGTGG) configured into a 100nM stock solution;
2)配置LRPPRC-R14的复合物,R14浓度一直为10 -8M,LRPPRC蛋白浓度梯度为(0,7,14,34,68,136ug/ml),室温放置30min。以只加荧光标记R14不加LRPPRC蛋白的孔作为对照背景孔; 2) Configure the LRPPRC-R14 complex, the concentration of R14 is always 10 -8 M, the concentration gradient of LRPPRC protein is (0,7,14,34,68,136ug/ml), and it is placed at room temperature for 30 minutes. Use only the fluorescently labeled R14 without LRPPRC protein as the control background hole;
3)30min后,用Infinite M1000 PRO plate reader(Tecan,Switzerland)酶标仪检测,计算各个LRPPRC蛋白浓度梯度下的信噪比S/N以及Z因子值,一般信噪比S/N值大于8,Z值在0.5‐1.0之间时,说明体系适用于高通量筛选。如图5所示,体系在蛋白浓度高于60ug/ml的时候,可以很好的满足高通量要求。3) After 30 minutes, use the Infinite M1000 PRO plate reader (Tecan, Switzerland) microplate reader to calculate the S/N and Z factor values of each LRPPRC protein concentration gradient. Generally, the S/N value of the S/N ratio is greater than 8 , When the Z value is between 0.5-1.0, it indicates that the system is suitable for high-throughput screening. As shown in Figure 5, when the protein concentration is higher than 60ug/ml, the system can meet the high throughput requirements well.
实施例4Example 4
按以上优化好的蛋白、核酸浓度,从含有850个小分子化合物的文库进行高通量筛选,从文库中筛选可以阻断核酸适配体R14与LRPPRC结合的小分子化合物,如图6所示,总计20种化合物可以阻碍LRPPRC与核酸的结合。从图7看出醋酸棉酚(GAA)显示出较强的LRPPRC抑制功能。具体的筛选方法如下:According to the above optimized protein and nucleic acid concentration, high-throughput screening is performed from a library containing 850 small molecule compounds, and small molecule compounds that can block the binding of aptamer R14 and LRPPRC are screened from the library, as shown in Figure 6. , A total of 20 compounds can hinder the binding of LRPPRC to nucleic acids. It can be seen from Figure 7 that gossypol acetate (GAA) shows a strong LRPPRC inhibitory function. The specific screening methods are as follows:
1)体外原核表达纯化出LRPPRC的RNA结合区域C-domain蛋白质;1) In vitro prokaryotic expression and purification of LRPPRC RNA binding region C-domain protein;
2)体外合成荧光素标记(包括但不限于HEX、CY3、CY5等荧光标记方法)的LRPPRC特异性结合的核酸适配体R14-flu;2) In vitro synthesis of fluorescein-labeled (including but not limited to HEX, CY3, CY5 and other fluorescent labeling methods) LRPPRC specific binding nucleic acid aptamer R14-flu;
3)配置LRPPRC与R14-flu的复合物体系,以PBS作为缓冲液,浓度为LRPPRC(120ug/ml),R14-flu(40nM),于黑色不透光的384孔板中,每孔加入15ul的LRPPRC与 R14-flu的复合物;3) Configure the complex system of LRPPRC and R14-flu, use PBS as the buffer, the concentration is LRPPRC (120ug/ml), R14-flu (40nM), in a black opaque 384-well plate, add 15ul to each well The complex of LRPPRC and R14-flu;
4)将850种小分子化合物用PBS分别稀释为60uM的储备液,于384孔板每个孔加入10ul,以DMSO孔作为对照,室温作用5min;4) Dilute 850 small molecule compounds with PBS to 60uM stock solution, add 10ul to each well of a 384-well plate, use DMSO well as a control, and act at room temperature for 5 minutes;
5)Infinite M1000 PRO plate酶标仪对每个孔的荧光信号以及偏振光信号分别进行采集,与DMSO孔的信号进行归一化处理,计算每种小分子加入后,统计偏振光的抑制率以及荧光信号自身的变化倍数,以偏振光的抑制率为横坐标,以荧光信号自身的变化倍数为纵坐标得到图6,如图6所示,总计20种小分子化合物可以阻碍LRPPRC与核酸的结合,即总计20种负调控剂可以阻碍LRPPRC与核酸的结合;5) The Infinite M1000 PRO plate microplate reader collects the fluorescence signal and polarized light signal of each well, and normalizes the signal with the signal of the DMSO well, and calculates the inhibition rate of polarized light after each small molecule is added. The factor of change of the fluorescence signal itself is obtained by taking the inhibition rate of polarized light as the abscissa and the factor of change of the fluorescence signal itself as the ordinate. As shown in Fig. 6, a total of 20 small molecule compounds can hinder the binding of LRPPRC to nucleic acid. , That is, a total of 20 negative regulators can hinder the binding of LRPPRC to nucleic acids;
6)筛选条件是偏振光信号的抑制率大于50%,而荧光值自身的变化小于1.5倍(由于偏振光也受到荧光分子自身的荧光信号强度的影响,本实施例需要保证小分子加入后偏振光的变化是因为蛋白与核酸的结合被抑制了,而不是小分子的加入降低了荧光分子的荧光信号导致的。)6) The screening conditions are that the inhibition rate of the polarized light signal is greater than 50%, and the change of the fluorescence value itself is less than 1.5 times. The change in light is caused by the inhibition of protein and nucleic acid binding, rather than the addition of small molecules that reduce the fluorescence signal of fluorescent molecules.)
针对20种候选小分子化合物的偏振光抑制率进行统计,统计结果如图7所示,其中GAA显示出最大的偏振光抑制能力,也就是GAA作为负调控剂种的一种能最有效的抑制LRPPRC蛋白与核酸的结合。Statistics on the polarization inhibition rates of 20 candidate small molecule compounds are performed. The statistical results are shown in Figure 7. GAA shows the largest polarization inhibition ability, that is, GAA as a negative regulator can most effectively inhibit The binding of LRPPRC protein to nucleic acid.
实施例5Example 5
本实施例分别采用荧光滴定及等温量热的方法,检测LRPPRC与GAA的直接结合。In this example, fluorescence titration and isothermal calorimetry were used to detect the direct binding of LRPPRC and GAA.
一、荧光滴定法测定GAA与LRPPRC蛋白的直接结合1. Fluorescence titration method to determine the direct binding of GAA and LRPPRC protein
1)体外原核表达纯化出LRPPRC的RNA结合区域C-domain蛋白质(60ug/ml);1) In vitro prokaryotic expression and purification of the C-domain protein (60ug/ml) of the RNA binding region of LRPPRC;
2)配置GAA的储备液浓度为50mM;2) The stock solution concentration of GAA is 50mM;
3)在LRPPRC蛋白液中添加浓度梯度的GAA,分别为0,0.25,0.5,1.0,2.0,4.0,8.0,16,32uM;3) Add a concentration gradient of GAA to the LRPPRC protein solution, respectively 0, 0.25, 0.5, 1.0, 2.0, 4.0, 8.0, 16, 32uM;
4)采用FLS980 fluorescence spectrometer(Edinburgh Instruments,Ltd.)荧光光谱仪检测LRPPRC蛋白在300-380nm波段额荧光值变化。绘制在不同GAA浓度下LRPPRC蛋白的荧光光谱变化,具体如图8所示,从图8可以看出,随着GAA浓度的增加,LRPPRC蛋白的自发荧光逐渐降低。4) Use FLS980 fluorescence spectrometer (Edinburgh Instruments, Ltd.) to detect the change in fluorescence value of LRPPRC protein in the 300-380nm band. Plot the changes in the fluorescence spectrum of the LRPPRC protein at different GAA concentrations, as shown in Figure 8. As can be seen from Figure 8, as the GAA concentration increases, the autofluorescence of the LRPPRC protein gradually decreases.
二、等温量热法(ITC)测定GAA与LRPPRC蛋白的直接结合2. Isothermal calorimetry (ITC) to determine the direct binding of GAA and LRPPRC protein
1)体外原核表达纯化出LRPPRC的RNA结合区域C-domain蛋白质(60ug/ml);1) In vitro prokaryotic expression and purification of the C-domain protein (60ug/ml) of the RNA binding region of LRPPRC;
2)配置GAA的储备液浓度为50mM;2) The stock solution concentration of GAA is 50mM;
3)将GAA储备液分步滴入LRPPRC蛋白缓冲液,iTC200 instrument(MicroCal,GE)等温 量热仪记录每次加入GAA后温度变化,实验结果如图9所示,从图9可以看出,GAA与LRPPRC的混合后有显著的放热现象。3) Drop the GAA stock solution into the LRPPRC protein buffer step by step, and the iTC200 instrument (MicroCal, GE) isothermal calorimeter records the temperature change after each addition of GAA. The experimental results are shown in Figure 9, which can be seen from Figure 9. After GAA and LRPPRC are mixed, there is a significant exothermic phenomenon.
由上可知,荧光滴定及等温量热实验都证实LRPPRC与GAA存在直接结合。It can be seen from the above that fluorescence titration and isothermal calorimetry experiments have confirmed the direct binding of LRPPRC and GAA.
实施例6Example 6
验证GAA抑制LRPPRC的分子功能实验Experiment to verify the molecular function of GAA inhibiting LRPPRC
本实施例主要从两个方面验证GAA对LRPPRC有抑制作用,具体如下:This embodiment mainly verifies that GAA has an inhibitory effect on LRPPRC from two aspects, as follows:
一、GAA直接降解LRPPRC蛋白1. GAA directly degrades LRPPRC protein
1)肺腺癌细胞系A549、乳腺癌细胞系MCF7、肺癌细胞系H1299、乳腺癌细胞系BT474、乳腺癌细胞系MCF7、肺癌细胞系H460培养至对数生长期,加入浓度梯度的GAA(0、1、5、10uM),培养48小时后,离心收集细胞,裂解后获取细胞全蛋白。40ug总蛋白用于western blot检测LRPPRC蛋白的变化趋势;1) Lung adenocarcinoma cell line A549, breast cancer cell line MCF7, lung cancer cell line H1299, breast cancer cell line BT474, breast cancer cell line MCF7, lung cancer cell line H460 were cultured to the logarithmic growth phase, and a concentration gradient of GAA (0 , 1, 5, 10uM), after 48 hours of culturing, the cells were collected by centrifugation, and the whole cell protein was obtained after lysis. 40ug total protein is used for western blot to detect the change trend of LRPPRC protein;
2)肺腺癌细胞系A549、乳腺癌细胞系MCF7、肺癌细胞系H1299、乳腺癌细胞系BT474、乳腺癌细胞系MCF7、肺癌细胞系H460培养至对数生长期,采用终浓度为10uM的GAA进行时间梯度实验,分别处理(0、8、16、24小时)。离心收集细胞,裂解后获取细胞全蛋白。40ug总蛋白用于western blot检测LRPPRC蛋白的变化趋势,LRPPRC蛋白的变化趋势如图10所示。2) Lung adenocarcinoma cell line A549, breast cancer cell line MCF7, lung cancer cell line H1299, breast cancer cell line BT474, breast cancer cell line MCF7, lung cancer cell line H460 were cultured to the logarithmic growth phase, using GAA with a final concentration of 10uM Carry out the time gradient experiment, treat separately (0, 8, 16, 24 hours). The cells were collected by centrifugation, and the whole cell protein was obtained after lysis. 40ug total protein is used in western blot to detect the change trend of LRPPRC protein. The change trend of LRPPRC protein is shown in Figure 10.
二、RIP实验(RNA Immunoprecipitation)验证GAA影响CDK6的mRNA与LRPPRC蛋白的结合:2. RIP experiment (RNA Immunoprecipitation) verifies that GAA affects the binding of CDK6 mRNA and LRPPRC protein:
1)胰酶消化收集肺腺癌细胞系A549、乳腺癌细胞系MCF7、肺癌细胞系H1299、乳腺癌细胞系BT474、乳腺癌细胞系MCF7、肺癌细胞系H460,裂解细胞提取细胞裂解液,往细胞裂解液中添加终浓度10uM的所示化合物(GAA、7F2、1E5、10C5、11E10),以添加DMSO的样品作为NC对照。1) Trypsin digestion to collect lung adenocarcinoma cell line A549, breast cancer cell line MCF7, lung cancer cell line H1299, breast cancer cell line BT474, breast cancer cell line MCF7, lung cancer cell line H460, lyse the cells to extract the cell lysate, and transfer to the cells The indicated compounds (GAA, 7F2, 1E5, 10C5, 11E10) with a final concentration of 10uM were added to the lysate, and the sample with DMSO added was used as the NC control.
2)每管添加2ug的LRPPRC抗体(abcam公司,货号ab97505)及50ul的protein A/G磁珠,四度过夜,孵育后,PBS洗涤,提取protein A/G磁珠上富集的mRNA,逆转录后进行Realtime-PCR扩增,检测CDK6的mRNA丰度,用DMSO处理样本的富集量进行归一化统计分析,统计结果如图11所示。2) Add 2ug of LRPPRC antibody (abcam company, catalog number ab97505) and 50ul protein A/G magnetic beads to each tube, overnight at four degrees, after incubation, wash with PBS, extract mRNA enriched on protein A/G magnetic beads, and reverse After recording, Realtime-PCR amplification was performed to detect the abundance of CDK6 mRNA. The enrichment amount of samples processed with DMSO was subjected to normalized statistical analysis. The statistical results are shown in Figure 11.
由图10可知,在用GAA处理肿瘤细胞后,LRPPRC的蛋白水平显著下降。It can be seen from Fig. 10 that the protein level of LRPPRC decreased significantly after treating tumor cells with GAA.
由图11可知,在用GAA处理肿瘤细胞后,用LRPPRC特异性抗体捕获到的能与LRPPRC特异性结合的CDK6的mRNA是显著减少的,说明GAA也可以阻断LRPPRC与mRNA的结合。It can be seen from Figure 11 that after GAA is used to treat tumor cells, the CDK6 mRNA that can specifically bind to LRPPRC captured by the LRPPRC specific antibody is significantly reduced, indicating that GAA can also block the binding of LRPPRC to mRNA.
综上所述,GAA可以通过降低LRPPRC基因表达或减弱LRPPRC蛋白活性来抑制肿瘤细胞的生长,从而达到治疗LRPPRC高表达肿瘤疾病的目的。In summary, GAA can inhibit the growth of tumor cells by reducing the expression of LRPPRC gene or reducing the activity of LRPPRC protein, so as to achieve the purpose of treating tumor diseases with high expression of LRPPRC.
与现有技术相比,本发明的技术方案具有以下优点:Compared with the prior art, the technical solution of the present invention has the following advantages:
首先,本发明实施例使用短的核酸适配体R14,核酸适配体R14相比天然存在的RNA及DNA序列来讲具有更加短的序列与分子量,这保证了筛选过程中偏振信号检测窗口足够大,使得检测信噪比有很好的保证;First of all, the embodiment of the present invention uses short nucleic acid aptamer R14, which has a shorter sequence and molecular weight compared with naturally occurring RNA and DNA sequences, which ensures that the polarization signal detection window is sufficient during the screening process. Large, so that the detection signal-to-noise ratio has a good guarantee;
其次该筛选方法在操作过程中,无需预先对目标蛋白进行精细的晶体结构分析,可以极大的降低了药物筛选的门槛;Secondly, during the operation of this screening method, there is no need to perform detailed crystal structure analysis of the target protein in advance, which can greatly reduce the threshold of drug screening;
最后,该筛选方法对于广泛的核酸结合蛋白具有很好的通用性,极易推广。Finally, this screening method has good versatility for a wide range of nucleic acid binding proteins and is easy to popularize.
本领域的普通技术人员可以理解,上述各实施方式是实现本发明的具体实施例,而在实际应用中,可以在形式上和细节上对其作各种改变,而不偏离本发明的精神和范围。Those of ordinary skill in the art can understand that the above-mentioned embodiments are specific examples for realizing the present invention, and in actual applications, various changes can be made in form and details without departing from the spirit and spirit of the present invention. range.

Claims (10)

  1. 一种用于筛选LRPPRC调控剂的产品,其特征在于,包括试剂盒和装置,所述试剂盒包括重组LRPPRC蛋白、GST蛋白、荧光素标记的核酸适配体R14、以及荧光素标记的对照核酸;所述装置包括多孔板和荧光偏振信号检测仪。A product for screening LRPPRC regulators, which is characterized by comprising a kit and a device, the kit comprising recombinant LRPPRC protein, GST protein, fluorescein-labeled nucleic acid aptamer R14, and fluorescein-labeled control nucleic acid ; The device includes a porous plate and a fluorescence polarization signal detector.
  2. 如权利要求1所述用于筛选LRPPRC调控剂的产品,其特征在于,所述重组LRPPRC的浓度与GST蛋白浓度相同,均为14-136μg/mL,优选68-120μg/mL。The product for screening LRPPRC regulators according to claim 1, wherein the concentration of the recombinant LRPPRC is the same as the GST protein concentration, both 14-136 μg/mL, preferably 68-120 μg/mL.
  3. 如权利要求1所述用于筛选LRPPRC调控剂的产品,其特征在于,所述核酸适配体R14的序列为GGTGGGTGGGTTGGGTGG,所述对照核酸的序列为AATTTTTTAATTATTTATATTA;所述荧光标记的核酸适配体R14与荧光标记的对照核酸浓度相同,储备液浓度均为100nM,工作液浓度均为10 -8M。 The product for screening LRPPRC regulators according to claim 1, wherein the sequence of the nucleic acid aptamer R14 is GGTGGGTGGGTTGGGTGG, and the sequence of the control nucleic acid is AATTTTTTAATTATTTATATTA; the fluorescently labeled nucleic acid aptamer R14 The concentration of the fluorescently labeled control nucleic acid is the same, the concentration of the stock solution is 100nM, and the concentration of the working solution is 10 -8 M.
  4. 如权利要求1所述用于筛选LRPPRC调控剂的产品,其特征在于,所述荧光偏振信号检测仪是酶标仪,优选Infinite M1000 PRO plate reader酶标仪。The product for screening LRPPRC modulators according to claim 1, wherein the fluorescence polarization signal detector is a microplate reader, preferably an Infinite M1000 PRO plate reader.
  5. 如权利要求1-4任一项所述用于筛选LRPPRC调控剂的产品,其特征在于,所述产品用于筛选LRPPRC蛋白负调控剂或C端结合剂。The product for screening LRPPRC modulators according to any one of claims 1 to 4, wherein the product is used for screening LRPPRC protein negative modulators or C-terminal binding agents.
  6. 一种基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,其特征在于,包括以下步骤:A method for identifying LRPPRC modulators based on fluorescence polarization signal detection is characterized in that it comprises the following steps:
    1)原核表达纯化LRPPRC蛋白和GST蛋白;1) Prokaryotic expression and purification of LRPPRC protein and GST protein;
    2)合成荧光素标记的核酸适配体R14和荧光标记对照核酸,所述对照核酸的序列为AATTTTTTAATTATTTATATTA;2) Synthesis of fluorescein-labeled nucleic acid aptamer R14 and fluorescent-labeled control nucleic acid, the sequence of the control nucleic acid is AATTTTTTAATTATTTATATTA;
    3)分别将LRPPRC蛋白与荧光标记的核酸适配体R14混合、将LRPPRC蛋白与荧光标记对照核酸混合、将荧光标记的核酸适配体R14与GST蛋白混合,加入多孔板不同的孔中;3) Mix LRPPRC protein with fluorescently labeled aptamer R14, LRPPRC protein with fluorescently labeled control nucleic acid, and fluorescently labeled aptamer R14 with GST protein, and add them to different wells of the multiwell plate;
    4)向各孔中加入候选分子;4) Add candidate molecules to each well;
    5)以荧光偏振信号检测仪检测步骤3)中各混合物的荧光偏振信号。5) Detect the fluorescence polarization signal of each mixture in step 3) with a fluorescence polarization signal detector.
  7. 如权利要求6所述基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,其特征在于,所述步骤3)进一步包括DMSO空白对照。The method for identifying LRPPRC modulators based on fluorescence polarization signal detection according to claim 6, wherein the step 3) further comprises a DMSO blank control.
  8. 如权利要求6所述基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,其特征在于,所述LRPPRC、GST蛋白的反应浓度均为120μg/mL,所述荧光标记的核酸适配体R14、荧光标记对照核酸的反应浓度均为40nM;所述候选分子的工作浓度为24μM。The method for identifying LRPPRC modulators based on fluorescence polarization signal detection according to claim 6, wherein the reaction concentrations of the LRPPRC and GST proteins are both 120 μg/mL, and the fluorescently labeled nucleic acid aptamer R14, fluorescently labeled The reaction concentration of the control nucleic acid is 40 nM; the working concentration of the candidate molecule is 24 μM.
  9. 如权利要求6-8任一项所述基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,其特征在于,采集所述孔板上每个孔的荧光信号以及偏振光信号;与DMSO孔的信号进行归一化处理,加入小分子化合物后,所述孔的偏振光信号的抑制率大于50%;且荧光信号自身的变 化小于1.5倍的小分子化合物,即为LRPPRC负调控剂。The method for identifying LRPPRC modulators based on fluorescence polarization signal detection according to any one of claims 6-8, wherein the fluorescence signal and the polarization signal of each hole of the orifice plate are collected; After normalization, after adding small molecule compounds, the inhibition rate of the polarized light signal of the pore is greater than 50%; and the small molecule compounds whose fluorescence signal itself changes less than 1.5 times are LRPPRC negative regulators.
  10. 如权利要求6-8任一项所述基于荧光偏振信号检测鉴定LRPPRC调控剂的方法,其特征在于,所述方法为高通量筛选方法。The method for identifying LRPPRC modulators based on fluorescence polarization signal detection according to any one of claims 6-8, wherein the method is a high-throughput screening method.
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