WO2019240579A1 - Synthesis of aromatic epoxide derived compounds - Google Patents

Synthesis of aromatic epoxide derived compounds Download PDF

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WO2019240579A1
WO2019240579A1 PCT/NL2019/050361 NL2019050361W WO2019240579A1 WO 2019240579 A1 WO2019240579 A1 WO 2019240579A1 NL 2019050361 W NL2019050361 W NL 2019050361W WO 2019240579 A1 WO2019240579 A1 WO 2019240579A1
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azido
dihydronaphthalen
aromatic
dien
production process
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French (fr)
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Frank Hollmann
Wuyuan ZHANG
Florian TIEVES
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Technische Universiteit Delft
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    • C12P7/00Preparation of oxygen-containing organic compounds
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    • C07C2603/42Ortho- or ortho- and peri-condensed systems containing four condensed rings containing only six-membered rings
    • C07C2603/50Pyrenes; Hydrogenated pyrenes

Definitions

  • the invention relates to a production process for an aromatic epoxide derived compound.
  • the invention further relates to products formed in such production process.
  • arene oxides Production processes for aromatic epoxides (“arene oxides”) are known in the art.
  • JPS6347711B2 describes conducting a reaction between a polycyclic aromatic compound such as phenanthrene, pyrene or benzo[a]pyrene and a hypochlorite salt such as sodium hypochlorite under phase- transfer conditions in an inert solvent such as chlorinated or nitrated hydrocarbon such as methylene dichloride or chloroform, at 35-55 °C under reflux to give an arene oxide.
  • the phase transfer condition is made by using tetra-n-butyl ammonium chloride as a catalyst.
  • ARKIVOC describes nucleophilic ring-opening of 1,2- epoxides, including of benzene oxide-oxepin and naphthalene 1, 2-oxide.
  • DE102007016139A1 describes the oygenation of an N-heterocycle to form a N-oxide.
  • Aromatic epoxides (“arene oxides”) may be valuable building blocks for chemical synthesis.
  • NIH rearrangement also“NIH shift” - named for the National Institutes of Health where the rearrangement was first reported
  • nucleophilic epoxide ring opening may lead to a broad range of valuable aromatic epoxide derived compounds.
  • P450 monooxygenases may directly epoxidise aromatic xenobiotics. Also with the mechanistically related peroxygenases, aromatic epoxide intermediates may be produced. The intermediate aromatic epoxide, however, may be considered to be too unstable to be of any synthetic use except as precursor for the corresponding aromatic alcohols (via NIH rearrangement).
  • Aromatic epoxides may be potentially useful chemical building blocks.
  • known (chemical) synthesis methods that may be used for the production of aromatic epoxides, may be considered tedious and dangerous.
  • Aromatic epoxides may, however, also be formed in biological systems.
  • the gene APOl of Agrocybe aegerita codes for an unspecific peroxygenase (also: “aromatic peroxygenase”).
  • the unspecific peroxygenase may be able to catalyze a reaction between an aromatic compound and a peroxide leading to the formation of an aromatic alcohol.
  • the aforementioned reaction may occur via an aromatic epoxide intermediate undergoing a NIH rearrangement.
  • aromatic epoxide may generally be regarded to spontaneously undergo the NIH rearrangement leading to the formation of the aromatic alcohol.
  • an aspect of the invention to provide an alternative production process for an aromatic epoxide derived compound (also“aromatic epoxide derived chemical”), which preferably further at least partly obviates one or more of above-described drawbacks.
  • aromatic epoxide derived compound also“aromatic epoxide derived chemical”
  • the present invention may have as object to overcome or ameliorate at least one of the disadvantages of the prior art, or to provide a useful alternative.
  • aromatic epoxides may be sufficiently stable for a nucleophilic attack using, for example, azide, thereby opening up the potential for the synthesis of a wide range of aromatic epoxide derived compounds.
  • the present invention relates to the formation of aromatic epoxide derived compounds, via the formation of an aromatic epoxide using an oxidoreductase, and a subsequent reaction involving a nucleophile - such as an azide ion - instead of the spontaneous isomerization to an aromatic alcohol.
  • the invention provides a production process for the production of an aromatic epoxide derived compound, the production process comprising: (i) an epoxidation stage comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in an aromatic epoxide, wherein the aromatic compound comprises an aromatic ring structure, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is especially selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases; (ii) a ring-opening stage comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound.
  • the oxidoreductase may comprise an unspecific peroxygenase.
  • the invention as described herein may provide a wealth of novel synthesis opportunities as aromatic epoxides may have received little attention so far due to an alleged lack of stability.
  • the ring-opening-stage (also: nucleophilic attack stage) following the epoxidation of the ring structure may be carried out by various nucleophiles, resulting in a variation of possible aromatic epoxide derived compounds for each potential starting aromatic compound.
  • the aromatic epoxide derived compound may be further reacted with one or more reactants, resulting in a second aromatic epoxide derived compound.
  • Several non-limiting examples hereof are highlighted in the embodiments.
  • aromatic epoxide derived compound is hereinafter especially used to refer both to the product of the ring-opening-stage, as well as to a “second aromatic epoxide derived compound”, i.e., any product of the production process as described herein may be referred to as“aromatic epoxide derived compound”.
  • second aromatic epoxide derived compound is specifically used herein to refer to a compound resulting from one or more additional reactions following the ring-opening-stage.
  • the enzymatic epoxidation step may result in a substantially enantiomerically pure aromatic epoxide, which may further result in a substantially enantiomerically pure aromatic epoxide derived compound.
  • a substantially enantiomerically pure compound may have an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1.
  • ee enantiomeric excess
  • the term“enantiomerically pure” refers to a compound (sample) consisting of a single enantiomer, i.e., a compound (sample) having an ee equal to 1.
  • the production process as described herein may provide enantiomerically pure aromatic epoxide derived compounds.
  • the epoxidation stage comprises the oxidoreductase catalyzed epoxidation of an aromatic compound by a peroxide, resulting in the formation of an aromatic epoxide.
  • the oxidoreductase may be configured to catalyze the epoxidation of the aromatic ring structure.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide in the presence of a first solvent for the aromatic compound.
  • the first solvent may comprise one or more of a nonpolar solvent, a polar aprotic solvent, a polar protic solvent, and/or a supercritical solvent.
  • the first solvent may comprise one or more of a nonpolar solvent a polar aprotic solvent, or a supercritical solvent.
  • the first solvent may comprise an aqueous solvent.
  • the first solvent may comprise one or more solvents selected from the group consisting of pentane, cyclopentane, hexane, cyclohexane, benzene, toluene, l,4-dioxane, chloroform, diethyl ether, and dichlorom ethane.
  • the first solvent may comprise one or more solvents selected from the group consisting of tetrahydrofuran, ethyl acetate, acetone, dimethylformamide, acetonitrile, dimethyl sulfoxide, nitromethane, and propylene carbonate.
  • the first solvent may comprise one or more solvents selected from the group consisting of formic acid, n-butanol, isopropyl alcohol, n-propanol, ethanol, methanol, acetic acid, and water.
  • the first solvent may comprise e.g., scCCf (super critical C0 2 ).
  • the first solvent may comprise the aromatic compound. In further embodiments, the first solvent may consist of the aromatic compound. In alternative embodiments, the first solvent may be chosen such that the oxidoreductase does not catalyze epoxidation of the first solvent.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide in the presence of an epoxidation reaction mixture, wherein the epoxidation reaction mixture comprises one or more of the aromatic compound, the peroxide, the peroxygenase, the first solvent, a first buffer, and a first salt.
  • the epoxidation reaction mixture may be configured to provide specific reaction conditions, such as a specific pH and/or ionic strength.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH selected from the range of 5.0-8.5.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH selected from the range of 5.0-9.5. In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH ⁇ 9.0, such as ⁇ 8.5, especially ⁇ 8.0, such as ⁇ 7.5.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide at an acidic pH, especially at a pH ⁇ 7, such as ⁇ 6.5, especially ⁇ 6.0. In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH > 5.0, such as > 5.5, especially >6.0.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide at about a first temperature.
  • the first temperature may especially be selected from the range of 0-45 °C, more especially from the range of 20-45 °C.
  • the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a temperature selected from the range of 0-45 °C.
  • An epoxide is especially defined as a cyclic ether with a three-atom ring structure, e.g., a compound with the formula R1-O-R2, or including a group with such formula, wherein Ri and Ri are also covalently bonded.
  • an epoxide comprises an epoxide group of an O and 2 other atoms, wherein each of the three atoms is covalently bonded to the other two.
  • aromatic epoxide herein especially refers to a compound obtainable by the introduction of an epoxide group in an aromatic ring structure, i.e., both atoms covalently bonded to oxygen after epoxidation were part of an aromatic ring structure prior to epoxidation.
  • the oxidoreductase may catalyze the epoxidation of the aromatic ring structure.
  • Ri and R 2 are independently selected from carbon comprising (organic) groups, wherein a carbon atom is bonded to the O atoms of the respective organic compounds of the epoxide.
  • an epoxide may also be defined as a compound with the formula (Ra,Rb)Cl-0-C2(Rc,Rd), or including a group with such formula, wherein Cl and C2 are covalently bonded, and wherein Ra, Rb, Rc, and Rd are each independently e.g. selected from H and a hydrocarbon.
  • Aromatic compounds may be well known, and may be very stable. In general, a compound has to meet four criteria in order to be considered aromatic: (i) the compound comprises a delocalized conjugated p system (commonly depicted as alternating single and double bonds), (ii) the compound comprises a coplanar structure, with all atoms contributing to the conjugated p system in the same plane, (iii) the compound comprises an aromatic ring structure comprising the atoms contributing to the delocalized conjugated p system in one or more rings, (iv) the compound comprises 4n+2 delocalized p electrons, wherein n is a non negative integer (Huckel's rule).
  • the aromatic compound herein especially comprises an aromatic ring structure.
  • the aromatic compound may comprise one or more of C, N, P, O or any other (ring) element.
  • the aromatic compound may comprise an aromatic hydrocarbon.
  • the aromatic compound comprises at least H and C, However, embodiments wherein the aromatic compound does not comprise H and/or C are not excluded.
  • the aromatic compound may comprise pentazole (HN5), or hexachlorobenzene.
  • the aromatic ring staicture may comprise one or more different elements, especially one or more of C, N, O, S, Sn, Si, B, Se and P.
  • the aromatic ring structure may comprise two or more different elements, i.e., the aromatic ring structure may comprise a heterocyclic ring structure.
  • the aromatic ring staicture may comprise C and one or more of N, O, S, Sn, Si, B, and Se, such as one or or more of O, S, Sn, Si, B, Se, more especially O.
  • the aromatic ring structure may consist of a plurality of atoms of the same type of one element, especially of C or N, i.e., in embodiments the aromatic ring staicture may comprise a homocyclic ring structure.
  • the aromatic ring structure may consist of carbon atoms.
  • aromatic ring structure especially refers to the ring staicture and not to the side groups.
  • the aromatic compound comprises an aromatic ring structure having side groups.
  • the aromatic ring structures of benzene and toluene both consists of six C
  • the aromatic ring staicture of naphthalene consists of ten C
  • the aromatic ring structure of furan consists of four C and one O.
  • the side groups of the aromatic ring structure may comprise one or more different elements.
  • the aromatic ring structure may have one or more side groups independently selected from the group comprising H, C3 ⁇ 4, Cl, Br, I, OC3 ⁇ 4, CFs, F, CN, N0 2 , NH 2 , CONH 2 , COCTE, NHR, OCH2CH3, OH, more especially one or more side groups independently selected from the group comprising C3 ⁇ 4, Cl, Br, I, OCH3, CF 3 , F, CN, N0 2 , NH 2 , CONH , COCH:,, NHR, OCH2CH3, and OH, such as one or more side groups independently selected from the group comprising CHs, Cl, Br, OCH3, CF3, and F.
  • one or more side groups of the aromatic ring structure may consist of H, such as two or more (adjacent) side groups. More especially, all side groups of the aromatic ring staicture may consist of H.
  • the aromatic compound may comprise one or more of naphthalene, l-chloronaphthalene, benzene, aniline, toluene, phenanthrene, pyrene, p-nitrophenol, pyridine, dibenzofuran, anthracene, chrysene, fluoranthrene, fluorine, corannulene, coronene, hexahelicene.
  • the peroxide comprises a compound selected from the group of compounds having the formula R 1 -O-O-R 2 , wherein Ri and R 2 refer to side groups comprising any elements, especially side groups comprising C and/or H, more especially side groups consisting of H.
  • the peroxide may comprise H 2 O 2 .
  • the epoxidation step may comprise reacting the aromatic compound and the peroxide in the presence of an H 2 O 2 source, such as one or more compounds selected from the group consisting of carbamide peroxide, sodium percarbonate, ammonium peroxydi sulfate, organic hydroperoxides (e.g.
  • acetone peroxide acetyl acetone peroxide, acetozone (acetyl benzoyl peroxide), ascaridole, alkenyl peroxides, tert-butyl hydroperoxide, bis(trimethylsilyl) peroxide, cumene hydroperoxide, di-(l-naphthoyl)peroxide, diacetyl peroxide, di-tert-butyl peroxide (dtbp), dimethyldioxirane (dmdo), dioxirane, dipropyl peroxydi carbonate, ethyl hydroperoxide, iodoxy compounds, magnesium monoperoxy-phthalate, methyl ethyl ketone peroxide, methyl isobutyl ketone peroxide, meta-chloroperoxybenzoic acid (mcpba), tert-butyl peroxybenzoate (tbpb), paramenthane hydroperoxide (pm
  • Oxidoreductases are a large class of enzymes generally catalyzing reactions involving the transfer of electrons. Of specific interest herein are those oxidoreductases that catalyze reactions further involving the introduction of O into an organic molecule, such as reactions catalyzed by subclasses of oxidoreductases such as oxidases, peroxidases, oxygenases, and peroxygenases. Hence, in embodiments of the invention the oxidoreductase may be selected from the group consisting of oxidases, peroxidases, oxygenases and peroxygenases.
  • the invention is not limited to the use of oxidoreductase (classified as) belonging to any one of the aforementioned subclasses. It will further be clear to one skilled in the art that not each enzyme belonging to the aforementioned subclasses will catalyze the epoxidation of an aromatic ring structure. Hence, it will be clear to one skilled in the art that the invention relates to any oxidoreductase that catalyzes the epoxidation of an aromatic ring staicture.
  • Oxidases may catalyze oxidation-reduction reactions, especially oxidation-reduction reactions involving O 2 . At least part of the oxidases may catalyze a reaction involving the introduction of an oxygen into an organic compound.
  • cytochrome P450 oxidase may catalyze a monooxygenase reaction of the form RH + 0 2 + NADPH + H 1 ROH + H 2 0 + NADP + .
  • a xanthine oxidase may catalyze a reaction of the form RH + ROH + 2O2 + 2H + .
  • the introduction of oxygen in an organic compound may occur via an epoxide intermediate.
  • Peroxidases may typically catalyze reactions of the form R1OOR2 + 2e + 2H + RiOH + R 2 OH. At least part of the peroxidases may catalyze a reaction involving the introduction of an oxygen into an organic compound.
  • a peroxidase may catalyze a reaction selected from the group comprising Baeyer-Villiger oxidations, oxidations of styrene derivatives to corresponding ketones, and oxidations of sulfides to sulfoxides and sulfones.
  • Oxygenases may catalyze reactions involving the transfer of an oxygen atom from O2 to a substrate, especially to an organic compound. Oxygenases may be further classified into (i) monooxygenases, such as the aforementioned cytochrome P450 oxidase, which introduce one oxygen atom into a substrate, and (ii) dioxygenases which introduce both oxygen atoms from 0 2 into a substrate. In specific instances, the introduction of oxygen may occur via an epoxide intermediate.
  • Peroxygenases may catalyze reactions involving the transfer of an oxygen atom from a peroxide to a substrate, especially to an organic compound. Hence, peroxygenases may typically catalyze a reaction of the form RiH + R2OOH - RiOH + R2OH, especially wherein R2 consists of H. In specific instances, the introduction of oxygen may occur via an epoxide intermediate.
  • the oxidoreductase may comprise one or more of a cytochrome P450 enzyme, a heme-dependent and/or a vanadium-dependent oxygenase, a catalase, an unspecific peroxygenase (Enzyme Classification (EC) 1.1 1.2.1), a peroxidase (EC 1.11.1.7), a chloride peroxidase (EC 1.11.1. 10) and a bromide peroxidase (EC 1.11.1.18), especially one or more of an unspecific peroxygenase, a peroxidase, a chloride peroxidase, and a bromide peroxidase, more especially an unspecific peroxygenase.
  • a cytochrome P450 enzyme enzyme
  • a heme-dependent and/or a vanadium-dependent oxygenase a catalase
  • an unspecific peroxygenase Enzyme Classification (EC) 1.1 1.2.1)
  • the unspecific peroxygenase and/or a gene encoding the unspecific peroxygenase may be derived from one or more organisms selected from the group comprising Agrocybe aegerita, Agrocybe acericola, Agrocybe ainara, Agrocybe aivalis, Agrocybe cylindracea, Agrocybe dura, Agrocybe erebia, Agrocybe farinacea, Agrocybe jinua, Agrocybe molesta, Agrocybe paludosa, Agrocybe parasitica, Agrocybe pediades, Agrocybe praecox, Agrocybe piitaminum, Agrocybe re tiger a, Agrocybe semiorb icidcuis, Agrocybe sororia, Agrocybe vervacti, Coprinelhis
  • the unspecific peroxygenases and/or gene encoding the enzyme may be derived from one or more organisms selected from the group consisting of Agrocybe aegerita, Coprinellus radians, Marasmius rotula and Sulfolobus tokodaii.
  • the peroxidase and/or a gene encoding the peroxidase may be derived from one or more organisms selected from the group comprising Acorns calamus, Aedes aegypti, Aggegatibacter actinomycetemcomitaiis, Allium sativum, Arabidopsis thalicnia, Arachis hypogaea, Armoracia rusticana, Arthromyces ramosus, Arundo donax, Beta vidgaris, Bjerkandera adusta, Bos tauriis, Brassica napus, Brassica oleracea, Brassica rapa, Bubalus bubali, Butia capitata, Camellia sinensis, Capra hircus, Capsiam anmmm, Catharantns roseus, Chromolaena odorata, Cicer anetinmn,
  • the chloride peroxidase and/or a gene encoding the chloride peroxidase may be derived from one or more organisms selected from the group comprising Caldariomyces fumago, Aspergillus niger, Bazzania tiilobata, Musa paradisiaca, and Streptomyces toyocaensis.
  • the bromide peroxidase and/or a gene encoding the bromide peroxidase may be derived from one or more organisms selected from the group comprising Agocybe aegerita, Ascophyllum nodosum, Corallina officinalis, Corallina pilulifera, Delisea pulchra, Ecldonia stolonifera, Fucus distichus, Gracilaria changii, Homo sapiens, Kappaphycus alvaiezii, Laminaria hyperborea, Macrocystis pyrifera, Ochtodes secundiramea, Pseudomonas fluorescens, Pseudomonas putida, Saccharina latissima, Sti-eptomyces aureojaciens, Sti-eptomyces gi-
  • the invention is not limited to the use of a native oxidoreductase of any one of the organisms specifically mentioned herein. Rather, the oxidoreductase may comprise an oxidoreductase of an organism not specifically mentioned herein, especially wherein the enzyme is homologous to an oxidoreductase of any one of the mentioned organisms.
  • the oxidoreductase may comprise a mutant oxidoreductase, such as a mutant oxidoreductase comprising one or more amino acid substitutions, deletions and/or additions relative to a native oxidoreductase, especially wherein the mutant oxidoreductase is specifically designed through protein engineering.
  • a mutant oxidoreductase such as a mutant oxidoreductase comprising one or more amino acid substitutions, deletions and/or additions relative to a native oxidoreductase, especially wherein the mutant oxidoreductase is specifically designed through protein engineering.
  • the oxidoreductase may comprise a mutant unspecific peroxygenase.
  • the oxidoreductase may comprise one or more of the PaDa-I, the JaWa, and the Solo mutants of the unspecific peroxygenase of A grocybe aegerita as described in Molina-Espeja et al. 2016 ChemBioChem and in WO2017081355A1.
  • the oxidoreductase may comprise the Jed-I mutant of the unspecific peroxygenase of of Agrocybe aegerita as described in Ramirez-Escudero et al. 2018 ACS chemical biology.
  • the oxidoreductase may comprise a wildtype and/or mutant unspecific peroxygenase, especially a wildtype and/or mutant unspecific peroxygenase of Agrocybe aegerita, more especially one or more of the PaDa-I, the JaWa, the Solo, and the Jed-I mutants of the unspecific peroxygenase of Agrocybe aegerita.
  • the oxidoreductase may be provided via one or more micro-organisms producing the oxidoreductase, or via an addition of isolated oxidoreductase.
  • isolated oxidoreductase refers to biologically, especially microbially, produced oxidoreductase that has been isolated from the production organism.
  • the isolated oxidoreductase may essentially comprise purified oxidoreductase.
  • embodiments of the invention involve the use of isolated oxidoreductase.
  • the oxidoreductase may be produced by an organism naturally producing the oxidoreductase.
  • the oxidoreductase may be produced by a genetically modified organism.
  • the unspecific peroxygenase apol gene of Agrocybe aegerita is heterologously expressed in Pichia pastohs X-33, which exports the Apol protein (the unspecific peroxygenase) into a medium, for example into a liquid (growth) medium.
  • the oxidoreductase may be produced by an organism naturally producing the oxidoreductase, especially wherein the organism exports the oxidoreductase into a medium.
  • the oxidoreductase may be isolated from the medium to obtain an isolated oxidoreductase.
  • the media comprising (microbial) cells and oxidoreductase may be centrifuged such that the cells precipitate while the oxidoreductase remains in the supernatant.
  • the supernatant comprising the oxidoreductase may be used as a caide enzyme preparation in the epoxidation stage, i.e., in embodiments the oxidoreductase may be provided as crude enzyme preparation.
  • the oxidoreductase may also be further purified from the crude enzyme preparation, i.e., in embodiments the oxidoreductase may be provided in purified form.
  • the ring-opening stage comprises reacting the aromatic epoxide (of the epoxidation stage) and a nucleophile, resulting in an aromatic epoxide derived compound.
  • the ring-opening stage may comprise a nucleophilic substitution reaction at the epoxide group (“ring-opening reaction”), especially at an element bonded to O.
  • the nucleophilic substitution reaction may comprise an S N l or an SN2 type reaction.
  • the ring-opening stage may comprise reacting the aromatic epoxide and the nucleophile in the presence of a ring-opening reaction mixture, wherein the ring-opening reaction mixture may comprise one or more of the aromatic epoxide, the nucleophile, a second solvent, a second buffer, a second salt, and a second enzyme.
  • the ring-opening reaction mixture may be configured to provide specific reaction conditions, such as a specific pH and/or ionic strength.
  • the ring-opening reaction mixture may further be configured to catalyze the nucleophilic substitution reaction, especially the second enzyme may catalyze the nucleophilic substitution reaction.
  • the ring-opening stage may comprise reacting the aromatic epoxide and the nucleophile at about a second temperature.
  • the second temperature may especially be selected from the range of 0-60°C, more especially from the range of 20-50 °C.
  • a nucleophile is a chemical compound that can donate an electron pair to an electrophile to form a chemical bond, especially a covalent bond.
  • the aromatic epoxide, especially the epoxide group comprises the electrophile.
  • the nucleophile may comprise one or more of N 3 , CN , SCN ⁇ OCN ⁇ S 2 , ROH, RCT, Cf, Br ⁇ G, HCOri, N0 2 , CTBCOA , CH3COS-, (CH 3 CH 2 ) 3 N, (CH S CH ⁇ P, NH 3 , H 2 S, RNH 2 , RNHRf R-SH, PhSH, PhSeH, or PhOH, wherein Ph refers to a phenyl group, and wherein R and R’ independently refer to a chemical group comprising any elements but not being directly involved in the reaction.
  • the nucleophile may comprise one or more of Ns , HC0 2 , CN , NO A OCN , SCN , PhNCS, and HCO 2- .
  • the production process may further comprise a synthesis stage.
  • the synthesis stage may comprise reacting the aromatic epoxide derived compound with one or more reactants, resulting in a second aromatic epoxide derived compound.
  • the synthesis stage may comprise a synthesis reaction comprising reacting the aromatic epoxide derived compound with one or more reactants, resulting in a second aromatic epoxide derived compound.
  • the synthesis stage may comprise a plurality of successive (synthesis) reactions, i.e., the synthesis stage may comprise successively reacting the aromatic epoxide derived compound with one or more reactants.
  • the synthesis stage may comprise reacting the aromatic epoxide derived compound and the one or more reactants in the presence of a synthesis reaction mixture, wherein the synthesis reaction mixture may comprise one or more of the aromatic epoxide derived compound, the one or more reactants, a third solvent, a third buffer, a third salt, and a third enzyme.
  • the synthesis reaction mixture may further be configured to catalyze the synthesis reaction, especially the third enzyme may catalyze the synthesis reaction.
  • the synthesis reaction mixture may be configured to provide specific reaction conditions, such as a specific pH, temperature, chemical catalyst and/or ionic strength.
  • the term“synthesis reaction mixture” may also refer to a plurality of synthesis reaction mixtures.
  • the synthesis stage may comprise a plurality of successive reactions, wherein at least two of the successive reactions occur in the presence of two different synthesis reaction mixtures.
  • the synthesis stage may comprise reacting the aromatic epoxide derived compound and the one or more reactants at about a third temperature.
  • the third temperature may especially be selected from the range of 0-100 °C, more especially from the range of 25-70 °C.
  • the current invention also provides an enantiomerically pure aromatic epoxide derived compound obtainable by the production process as described herein.
  • a substantially enantiomerically pure aromatic epoxide derived compound such as an aromatic epoxide derived compound having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95- 1.
  • the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure.
  • the term enantiomerically pure refers to all molecules in a sample having the same chirality sense, especially the same chirality sense within detection limits.
  • the (substantially) enantiomerically pure aromatic epoxide derived compound may comprise a product of the synthesis stage, i.e., the (substantially) enantiomerically pure aromatic epoxide derived compound may comprise the second aromatic epoxide derived compound.
  • the aromatic epoxide derived compound may comprise one or more of (l S,6S)-6-azidocyclohexa-2,4-dien-l-ol, (l S,6S)-6- aminocyclohexa-2,4-dien-l-ol, (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol,
  • two or more of the epoxidation stage, the ring- opening-stage and the synthesis stage may be temporally and/or spatially separated.
  • the epoxidation stage and the ring-opening stage may be temporally and/or spatially separated.
  • the ring-opening stage and the synthesis stage may be temporally and/or spatially separated.
  • the temporal and/or spatial separation may be beneficial as suitable, especially optimal, reaction conditions may differ for the different stages.
  • the nucleophile reacting in the ring-opening stage may negatively affect the performance of the oxidoreductase in the epoxidation stage.
  • the epoxidation stage and the ring-opening stage may be temporally separated. Especially, the epoxidation stage may last for an epoxidation stage time.
  • the epoxidation stage time may be selected such that there is sufficient enzymatic conversion of the aromatic compound to the aromatic epoxide, while there is a limited spontaneous conversion of the aromatic epoxide to the aromatic alcohol (via the NIH-shift).
  • the successive reactions may be spatially and/or temporally separated.
  • the synthesis reaction mixture may comprise a plurality of synthesis reaction mixtures which are used in succession.
  • one or more of the epoxidation reaction mixture, the ring-opening reaction mixture and the synthesis reaction mixture may be periodically or continuously adjusted.
  • the pH of the epoxidation (ring-opening / synthesis) reaction mixture may be modified during the process.
  • the epoxidation stage may comprise supplying the aromatic compound and the peroxide to an enzyme reactor comprising oxidoreductase, wherein the enzyme reactor is configured to provide the aromatic epoxide to a nucleophile reaction unit, and wherein the ring-opening stage comprises reacting the aromatic epoxide and the nucleophile in the nucleophile reaction unit.
  • the enzyme reactor may comprise immobilized oxidoreductase.
  • the nucleophile reaction unit may be in fluid connection with an external recovery loop, wherein contents of the nucleophile reaction unit continuously or periodically pass through the external recovery loop, and wherein the external recovery loop is configured to return the aromatic epoxide and the nucleophile to the nucleophile reaction unit and to remove the aromatic epoxide derived compound.
  • the external recovery loop may comprise an aromatic epoxide derived compound tubing and an external recovery loop reactor. The aromatic epoxide derived compound tubing may be configured to provide a fluid contact between the nucleophile reaction unit and the external recovery loop reactor.
  • the external recovery loop reactor may be configured to enable the in situ removal of the produced aromatic epoxide derived compound, especially to enable the in situ removal of the produced aromatic epoxide derived compound on a solid phase. Additionally or alternatively, the external recovery loop may be configured to return the nucleophile back to the nucleophile reaction unit. Yet additionally or alternatively, the external recovery loop may be configured to return the aromatic epoxide back to the nucleophile reaction unit. Hence, in embodiments, the external recovery loop reactor may be configured to enable the in situ removal of the produced aromatic epoxide derived compound while simultaneously returning the nucleophile and/or the aromatic epoxide back to the nucleophile reaction unit, especially the nucleophile and the aromatic epoxide. In alternative or further embodiments, the external recovery loop reactor may comprise an outlet configured for the release of the aromatic epoxide derived compound.
  • the nucleophile reaction unit or the external recovery loop provides the aromatic epoxide derived compound to a synthesis reaction unit, wherein the synthesis stage comprises reacting the aromatic epoxide derived compound and the one or more reactants in the synthesis reaction unit.
  • the synthesis reaction unit may be in fluid connection with a third external recovery loop, wherein contents of the synthesis reaction unit continuously or periodically pass through the third external recovery loop, and wherein the third external recovery loop is configured to return the aromatic epoxide derived compound and the one or more reactants to the synthesis reaction unit and to remove the second aromatic epoxide derived compound.
  • the enzyme reactor may - during use - comprise a first reaction mixture and/or the nucleophile reaction unit may - during use - comprise a second reaction mixture and/or the synthesis reaction unit may - during use - comprise a third reaction mixture.
  • the enzyme reactor may comprise a first inlet configured to supply a component of the first reaction mixture, especially all components of the first reaction mixture.
  • the nucleophile reaction unit may comprise a second inlet configured to supply a component of the second reaction mixture.
  • the synthesis reaction unit may comprise a third inlet configured to supply a component of the third reaction mixture.
  • the first inlet may be functionally coupled to one or more tubings.
  • the first inlet may be functionally coupled to an aromatic compound inlet tubing supplying the aromatic compound and/or to a peroxide inlet tubing supplying the peroxide.
  • the aromatic compound inlet tubing may be configured to provide a fluid connection between the first inlet and an aromatic compound source. It will be clear to a person skilled in the art that each of the inlets may be functionally coupled to one or more tubings providing one or more components of a reaction mixture.
  • the enzyme reactor and the nucleophile reaction unit may be functionally coupled through an aromatic epoxide tubing.
  • the aromatic epoxide tubing may be configured to provide the aromatic epoxide to the nucleophile reaction unit from the enzyme reactor.
  • tubing may be arranged between the nucleophile reaction unit and one or more device elements selected from the group comprising the external recovery loop, the external recovery loop reactor, and the synthesis reactor, especially wherein the tubing is configured to provide a fluid connection between the nucleophile reaction unit and the device element.
  • tubing may be arranged between two synthesis reactors, especially wherein the tubing is configured to provide a fluid connection between the two synthesis reactors.
  • the production process may be part of or may be applied in e.g. the synthesis of bulk and/or specialty chemicals comprising, for example, triazole compounds, aromatic azides, amino alcohols, and aromatic amines, with applications, for example, as active pharmaceutical ingredients, agrochemicals, pharmaceutical therapeutics, antibiotics, medicine, and fluorescence probes, dyes, and antioxidants, and as substrates for further organic syntheses.
  • bulk and/or specialty chemicals comprising, for example, triazole compounds, aromatic azides, amino alcohols, and aromatic amines, with applications, for example, as active pharmaceutical ingredients, agrochemicals, pharmaceutical therapeutics, antibiotics, medicine, and fluorescence probes, dyes, and antioxidants, and as substrates for further organic syntheses.
  • the invention also provides a production process for producing an aromatic epoxide, the process comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in the aromatic epoxide, wherein the aromatic compound comprises an aromatic ring structure, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is especially selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases.
  • the invention also provides a product obtainable by such production process.
  • the herein described embodiments - as far as related to the epoxidation stage - may also apply to these aspects of the invention.
  • the invention also provides a production process for producing an aromatic epoxide derived compound, the process comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound.
  • the invention also provides a product obtainable by such production process.
  • an embodiment describing an epoxidation step may be an embodiment of the first aspect as well as of the third aspect, and a product mentioned in relation to such embodiment may further relate to the second, fourth and optionally sixth aspect of the invention.
  • the method of the invention may further facilitate the production of new compounds.
  • the invention may provide aromatic epoxide derived compounds.
  • the invention provides an aromatic epoxide derived compound selected from the group consisting of 1 -azido- 1,2- dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido- 5-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-(trifluorom ethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2-dihydronaphthalen- 1 -ol, 1 -azido-5-fluoro- 1 ,2-dihydronaphthalen-2-ol, 2- azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol
  • the aromatic epoxide derived compound may be selected from the group consisting of 1 -azido- l,2-dihydronaphthalen-2-ol, 2- azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-methyl- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido- 5-(trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2- dihydronaphthalen- l-ol, l-azido-5-fluoro-l,2-dihydronaphthalen-2-ol, 2-azido-5- chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-bromo
  • the aromatic epoxide derived compound may comprise 5-azido-4,5-dihydropyren-4-ol.
  • the aromatic epoxide derived compound may be (substantially) enantiomerically pure, having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1.
  • the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure.
  • the invention provides a derivative of an aromatic epoxide derived compound selected from the group consisting of 1- azido- 1 ,2-dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-5-(trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2-dihydronaphthalen- 1 -ol, 1 -azido-5-fluoro- 1 ,2- dihydronaphthalen-2-ol, 2-azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-ch
  • one or more of the H groups may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF 3 , CFb, C2H5, NO2, CoN, and C I+X H3+2 X O.
  • one or more of the H side groups of the aromatic ring staicture may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF3 ⁇ 4, CFE, C2H5, NO2, CoN, and C I ⁇ X H V 2 ⁇ 0.
  • a single H group may be replaced with a side group selected from the group comprising F, Cl, Br, I, CF 3 , CEE, C2H5, NO2, CoN, and ( ⁇ J F : >.
  • the derivative may comprise a derivative of an aromatic epoxide derived compound selected from the group consisting of 1- azido- 1 ,2-dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol,
  • the derivative may comprise a derivative of 5-azido-4,5-dihydropyren-4-ol.
  • the derivative of the aromatic epoxide derived compound may be (substantially) enantiomerically pure, having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1.
  • the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure.
  • Fig. 1 schematically depicts an embodiment of the production process according to the invention wherein naphthalene is the aromatic compound
  • Fig. 2 schematically depicts an embodiment of the production process according to the invention, wherein the epoxidation stage and the ring opening stage are spatially separated;
  • Fig. 3A-B depict experimental observations regarding the stability the aromatic epoxide produced in the epoxidation stage;
  • Fig. 4 depicts several aromatic epoxide derived compounds that were obtained through the production process as described herein;
  • Fig. 5 depicts several further aromatic epoxide derived compounds that may be obtained through the production process as described herein;
  • Fig. 6 depicts several non-limiting aromatic epoxide derived compounds that may be obtained using herein described procedures.
  • Fig. 1 schematically depicts an embodiment of the production process 10 according to the invention.
  • the epoxidation stage 200 comprises reacting the aromatic compound 100 with the peroxide 210 resulting in the aromatic epoxide 1 10, wherein the aromatic compound 100 comprises an aromatic ring structure, wherein the oxidoreductase 220 catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase 220 is selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases.
  • the ring-opening stage 300 comprises reacting the aromatic epoxide 110 and a nucleophile 310 resulting in the aromatic epoxide derived compound 120.
  • the synthesis stage 400 comprises reacting the aromatic epoxide derived compound 120 with one or more reactants 410 resulting in the formation of a second aromatic epoxide derived compound l20b.
  • the aromatic compound 100 comprises naphthalene
  • the peroxide 210 comprises H2O2
  • the oxidoreductase 220 comprises an unspecific peroxygenase, especially the unspecific peroxygenase Apol of Agrocybe aegerita
  • the aromatic epoxide 110 comprises naphthalene oxide
  • the nucleophile 310 comprises azide
  • the aromatic epoxide derived compound 120 comprises (lR,2R)-l-azido-l,2-dihydronaphthalen-2-ol
  • the one or more reactants 410 comprise HCIO4
  • the second aromatic epoxide derived compound l20b comprises l-azidonaphthalene.
  • H2O may be produced as a by-product of the epoxidation reaction.
  • the peroxide 210 does not comprise hydrogen peroxide but one or more other peroxides, one or more different by-products may be produced.
  • the epoxidation stage may comprise reacting the aromatic compound 100 and the peroxide 210 in the presence of a first solvent for the aromatic compound 100.
  • the first solvent may comprise an aqueous solvent.
  • the first solvent may comprise one or more of a nonpolar solvent, a polar aprotic solvent, or a supercritical solvent.
  • Fig. 1 further depicts the spontaneous NIH shift 500 converting the aromatic epoxide 110 into the aromatic alcohol 1 15.
  • the NIH shift 500 is an undesired side reaction with respect to the invention and may be minimized through design of the first reaction mixture and/or the second reaction mixture as well as through minimizing the time between the epoxidation stage 200 and the ring-opening stage 300.
  • the epoxidation stage may comprise reacting the aromatic compound 100 and the peroxide 210 in the presence of a first solvent for the aromatic compound 100, wherein the first solvent is chosen such that the occurrence of the NIH shift 500 is minimized.
  • the first solvent may, for example, comprise one or more of a nonpolar solvent, a polar aprotic solvent or a supercritical solvent.
  • the epoxidation stage 200 comprises supplying the aromatic compound 100 and the peroxide 210 to an enzyme reactor 250.
  • the enzyme reactor 250 comprises a first reaction mixture 230.
  • the enzyme reactor 250 further comprises a first inlet 260 configured to provide a component of the first reaction mixture 230, herein specifically the aromatic compound 100 via an aromatic compound inlet tubing 102 and the peroxide 210 via a peroxide inlet tubing 212.
  • the first reaction mixture 230 may comprise the oxidoreductase 220.
  • the oxidoreductase 220 may be immobilized on a staicture in the enzyme reactor 250, /. e.
  • the enzyme reactor 250 may comprise immobilized oxidoreductase.
  • the aromatic compound 100 and the peroxide 110 may react in the enzyme reactor resulting in the aromatic epoxide 1 10.
  • the enzyme reactor 250 may be configured to provide the aromatic epoxide 1 10 to the nucleophile reaction unit 350.
  • the enzyme reactor 250 is configured to provide the aromatic epoxide 1 10 to the nucleophile reaction unit 350 via an aromatic epoxide tubing 1 12.
  • the ring opening stage 300 comprises reacting the aromatic epoxide 110 and the nucleophile 310 in the nucleophile reaction unit 350 resulting in the aromatic epoxide derived compound 120.
  • the nucleophile reaction unit 350 may comprise a second reaction mixture 330.
  • the nucleophile reaction unit 350 is in fluid connection with an external recovery loop 370.
  • the external recovery loop 370 may be configured to return the aromatic epoxide 1 10 and the nucleophile 310 to the nucleophile reaction unit 350 and to remove the aromatic epoxide derived compound 120.
  • the external recovery loop 370 comprises an aromatic epoxide derived compound tubing 122 and a external recovery loop reactor 380.
  • the aromatic epoxide derived compound tubing 122 is configured to provide a fluid contact between the nucleophile reaction unit 350 and the external recovery loop reactor 380.
  • the external recovery loop reactor 380 may be configured to enable the in situ removal of the produced aromatic epoxide derived compound on a solid phase while simultaneously returning the nucleophile back to the nucleophile reaction unit.
  • the external recovery loop reactor 380 may comprise an outlet configured for the release of the aromatic epoxide derived compound.
  • the epoxidation stage and the ring-opening stage are spatially separated. In an alternative embodiment, the epoxidation stage and the ring-opening stage may be temporally separated.
  • Procedure 1 Enzymatic epoxidation reactions to prepare aromatic epoxides.
  • 2 mM naphthalene, 2 mM H2O2 and 200 nM unspecific peroxygenase of Agrocybe aegerita were added into 1.0 mL NaPi pH 7 (with 20% MeCN). The mixture was slowly stirred for 2.5-15 min, and then the mixture was moved to an ice bath and kept stirring for 30 min. The above concentration of each component is the final concentration under the condition applied. The mixture was then extracted with DCM and dried over MgS0 4 at 0 °C.
  • the solvent was evaporated at 0 °C and the product was purified by column using 10 % ethyl acetate in either pentane or heptane.
  • diethyl ether, chloroform or ethyl acetate can also be used.
  • the amount of co-solvent MeCN can vary from 0-70 % v/v in NaPi buffer.
  • Other co-solvents such as methanol, acetone, ethanol, dimethyl sulfoxide are also applicable.
  • the epoxidation may be performed at a temperature selected from the range of 0 - 45 °C.
  • the pH may be selected from the range of 5.0 to 8.5.
  • buffers may be used in the reactions such as a buffer selected from the group comprising sodium citrate, sodium acetate, Tris-H SCh, Bis-Tris, BES buffer and britton-robinson buffer, with the buffer concentration selected from the range of 10 to 500 mM.
  • Procedure 2 Quantification of naphthalene epoxide.
  • a reaction mixture with 100-400 nM unspecific peroxygenase of Agrocybe aegerita , 2 mM naphthalene and 2 mM H2O2 in NaPi (pH 7.0 with 20% CH 3 CN) was firstly prepared, then 20 pL of this mixture was added and mixed quickly to a 1980 pL of NaPi (pH 7.0 with 20% CH 3 CN).
  • the final concentration of naphthalene for UV assay was 0.02 mM.
  • Fig. 3a depicts the concentration of naphthalene epoxide C over time t in minutes with 100 nM unspecific peroxygenase (line Ai), with 200 nM unspecific peroxygenase (line A 2 ), and with 400 nM unspecific peroxygenase (line A 3 ).
  • Procedure 3 Quantification of naphthalene epoxide.
  • a reaction mixture with 200 nM unspecific peroxygenase of Agrocybe aegerita , 2 mM naphthalene and 1-4 mM H2O2 in NaPi (pH 7.0 with 20% CH 3 CN) was firstly prepared, then 20 pL of this mixture was added and mixed quickly to a 1980 pL of NaPi (pH 7.0 with 20% CH 3 CN.
  • the absorbance of this mixture at 266.5 nm (extinction coefficient 8850 niNT'cm 1 ) was recorded and the corresponding naphthalene epoxide shown in Fig. 3b.
  • FIG. 3b depicts the concentration of naphthalene epoxide C over time t in minutes with 1 mM H2O2 (line A4), with 2 mM H2O2 (line A5), and with 4 mM H2O2 (line A, ⁇ ,). It is clear from Fig. 3a-b that naphthalene epoxide is present for several minutes under these conditions rather than that it immediately undergoes the NIH shift.
  • Procedure 4 Ring-opening reactions with nucleophiles. 2 mM naphthalene, 2 mM H2O2 and 200 11M unspecific peroxygenase of Agrocybe aegerita were added into 1.0 mL NaPi pH 7 (with 20% MeCN). The mixture was slowly stirred for 2.5-10 min, and then the nucleophiles (e.g. N 3 -, CN-) with a certain concentration (0.01 to 0.25 M) were added. In other embodiments, the mixture may be slowly stirred for more than 10 minutes, such as for 15 minutes, especially 25 minutes. The above concentration of each component is the final concentration under the condition applied. The mixture was then extracted with DCM and dried over MgS0 4.
  • nucleophiles e.g. N 3 -, CN-
  • the solvent was evaporated at 30 °C and the aromatic epoxide derived compound was purified by column using 10-20 % ethyl acetate in pentane/heptane.
  • Other co-solvents, buffer and reaction conditions such as described in procedure 1“Enzymatic epoxidation reactions to prepare aromatic epoxides” may also be used here.
  • the concentration of the aromatic epoxide derived compound was quantified using high-performance liquid chromatography (HPLC) and is reported in the table below. The indicated conversion refers to the percentage of naphthalene converted to the aromatic epoxide derived compound according to the combination of procedures 1 and 4.
  • the nucleophile may comprise one or more of Ns , CN-, SCN-, OCN-, s 2 ; ROH, R0 , C1-, Br-, I-, HCO2 , N0 2 , CH3CO2 , CH3COS , (CH 3 CH2)3N, (CH 3 CH 2 )3P, NHS, H 2 S, RNH 2 , RNHR ⁇ R-SH, PhSH, PhSeH, or PhOH.
  • the aromatic compound comprises naphthalene
  • the oxidoreductase comprises the Apol protein (unspecific peroxygenase) of Agrocybe aegerita
  • the nucleophile comprises N 3 .
  • Procedure 5 Elimination of H 2 0 to aromatic azides.
  • perchloric acid 0.5-3 M
  • trifluoroacetic acid 0.5-3 M
  • the extraction and purification procedures are the same as mentioned in procedure 1“Enzymatic epoxidation reactions to prepare epoxides”.
  • the concentration of the second aromatic epoxide derived compound was quantified using gas chromatography (GC) and is reported in the table below.
  • the indicated conversion refers to the percentage of naphthalene converted to the second aromatic epoxide derived compound according to the combination of procedures 1,4 and 5.
  • Procedure 6 Reduction of aromatic azide to aromatic amine.
  • the reaction was performed in a one-pot three-step manner. After the epoxidation and ring-opening reaction with nucleophiles, the pH of the solution was then adjusted to approx. 9 by using NaOH (5 M). An amount of 10 mol% Pd/C was added directly to the solution. N 2 gas was bubbled through the reaction mixture for 10 min, the reaction vial was sealed, and a balloon of pure H 2 was applied to initiate the reduction. After 6 hours, the second aromatic epoxide derived product was extracted with DCM. The organic phase was dried over IYlgSCT and the solvent DCM was slowly evaporated in a rotavap.
  • the second aromatic epoxide derived product was purified by column using 10% ethyl acetate in pentane.
  • the extraction and purification procedures are the same as above mentioned in procedure 1 “enzymatic epoxidation reactions to prepare aromatic epoxides”.
  • a full conversion of aromatic azide to aromatic amine was observed using quantification via GC- MS.
  • Procedure 7 Reduction of azido alcohol to amino alcohols.
  • the reaction was performed in a one-pot three-step manner in a preparative scale. In a 100 ml reaction scale, 2 mM of naphthalene, 2 mM of H2O2 and 200 nM of unspecific peroxygenase were applied. After the addition of NaN 3 , the reaction was continued for 4 hours. The pH of the solution was then adjusted to approx. 9 by using NaOH (5 M). An amount of 10 mol% Pd/C was added directly to the solution. N? gas was bubbled through the reaction mixture for 10 min, the reaction vial was sealed, and a balloon of pure H 2 was applied to initiate the reduction. After 6 hours, the product was extracted with DCM.
  • Procedure 8 Click chemistry.
  • the reactions were performed in a two-pot three-step manner; however, in embodiments the reactions may also be performed in a sequential one-pot three-step manner.
  • the azido alcohol and alkyne e.g. 1.5 eq. phenyl acetylene
  • H 2 0 and tert-butyl alcohol (2: 1, v:v) 5mol % CuS0 4* 5H 2 0 and l0mol% sodium ascorbate were added.
  • the reaction mixture was stirred for 8 hours at 30 °C.
  • the product was extracted with DCM.
  • the organic phase was dried over MgS0 4 and the solvent DCM was slowly evaporated in a rotavap.
  • Fig. 4 schematically depicts several aromatic epoxide derived compounds (P15-P33) that were obtained using procedures 1,4 with azide as nucleophile and varying aromatic compounds.
  • the percentages indicate the conversion of the aromatic compound to the aromatic epoxide derived compound using the native unspecific peroxygenase from Agrocybe aegerita (the left percentage) or the “Solo-variant” of the unspecific peroxygenase (the right percentage).
  • “ND” refers to not detennined, i.e., not tested. refers to no observed conversion.
  • Fig. 4 schematically depicts: l-azido-l,2-dihydronaphthalen-2-ol P15, 2-azido-5-bromo-l,2-dihydronaphthalen-l-ol P16, 2-azido-5-methyl-l,2- dihydronaphthalen-l-ol P17, 2-azido-6-methyl-l,2-dihydronaphthalen-l-ol P18, 2-azido-5-(trifluorom ethyl)- 1 ,2-dihydronaphthalen- 1 -ol P 19, 2-azido-5-fluoro-
  • Fig. 5 schematically depicts several compounds that were obtained using procedures 1,4 with naphthalene or l-chloronapthalene as aromatic compound and varying nucleophiles. The percentages indicate the conversion of the aromatic compound to the aromatic epoxide derived compound using the native unspecific peroxygenase from Agrocybe aegerita.
  • the nucleophiles and compounds are: HC0 2 to produce 1 -hydroxy- l,2-dihydronaphthalen-2-yl formate Ni, CN to produce 1 -hydroxy- l,2-dihydronaphthalene-2-carbonitrile N 2 , NO3 to produce 1 -hydroxy- l,2-dihydronaphthalen-2-yl nitrate N 3 , OCN to produce 2- (isocyanooxy)-l,2-dihydronaphthalen-l-ol N 4 , SCN to produce 2-thiocyanato-
  • the nucleophile may comprise one or more of NT, HC0 2 ⁇ CN , NO:, , OCN , SCN-, PhNCS, and HCO 2 .
  • Fig. 6 schematically depicts several non-limiting aromatic epoxide derived compounds that may be obtained using the aforementioned procedures.
  • the depicted compounds may be the final product of the production process.
  • the depicted compounds may be subjected to one or more further reactions in the synthesis stage.
  • aromatic epoxide derived compounds include: (l S,6S)-6-azidocyclohexa-2,4-dien-l-ol Pl, (l S,6S)-6-aminocyclohexa-2,4-dien-l-ol P2, azidobenzene P3, (lR,6R)-6-azido- cyclohexa-2,4-dien-l-ol P4, (lR,6R)-6-aminocyclohexa-2,4-dien-l-ol P5, (lR,2R)-l-azido-l,2-dihydronaphthalen-2-ol P6, (lR,2R)-
  • one or more of the H groups may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF 3 , CFF, C 2 H 5 , NO 2 , CoN, and Ci+ x 3 ⁇ 4+ 2x O.
  • one or more of the H side groups of the aromatic ring structure may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF : ,, CH : ,, C 2 H 5 , N0 2 , CoN, and Ci J E x 0.
  • azidobenzene derivatives include l-azido-4-methylbenzene and l-azido-2-chloro-4- fluorobenzene.
  • the terms“substantially” or“essentially” herein, and similar terms, will be understood by the person skilled in the art.
  • the terms“substantially” or “essentially” may also include embodiments with“entirely”,“completely”,“all”, etc. Hence, in embodiments the adjective substantially or essentially may also be removed.
  • the term“substantially” or the term“essentially” may also relate to 90% or higher, such as 95% or higher, especially 99% or higher, even more especially 99.5% or higher, including 100%.
  • the term“and/or” especially relates to one or more of the items mentioned before and after“and/or”.
  • a phrase“item 1 and/or item 2” and similar phrases may relate to one or more of item 1 and item 2.
  • the term “comprising” may in an embodiment refer to "consisting of' but may in another embodiment also refer to "containing at least the defined species and optionally one or more other species”.
  • the invention may be implemented by means of hardware comprising several distinct elements, and by means of a suitably programmed computer.
  • a device claim, or an apparatus claim, or a system claim enumerating several means, several of these means may be embodied by one and the same item of hardware.
  • the mere fact that certain measures are recited in mutually different dependent claims does not indicate that a combination of these measures cannot be used to advantage.
  • the invention also provides a control system that may control the device, apparatus, or system, or that may execute the herein described method or process. Yet further, the invention also provides a computer program product, when running on a computer which is functionally coupled to or comprised by the device, apparatus, or system, controls one or more controllable elements of such device, apparatus, or system.
  • the invention further applies to a device, apparatus, or system comprising one or more of the characterizing features described in the description and/or shown in the attached drawings.
  • the invention further pertains to a method or process comprising one or more of the characterizing features described in the description and/or shown in the attached drawings.

Abstract

The invention provides a production process for the production of an aromatic epoxide derived compound, the production process comprising: (i) an epoxidation stage comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in an aromatic epoxide, wherein the aromatic compound comprises an aromatic ring structure, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases; (ii) a ring-opening stage comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound.

Description

Synthesis of aromatic epoxide derived compounds
FIELD OF THE INVENTION
The invention relates to a production process for an aromatic epoxide derived compound. The invention further relates to products formed in such production process.
BACKGROUND OF THE INVENTION
Production processes for aromatic epoxides (“arene oxides”) are known in the art. For example, JPS6347711B2 describes conducting a reaction between a polycyclic aromatic compound such as phenanthrene, pyrene or benzo[a]pyrene and a hypochlorite salt such as sodium hypochlorite under phase- transfer conditions in an inert solvent such as chlorinated or nitrated hydrocarbon such as methylene dichloride or chloroform, at 35-55 °C under reflux to give an arene oxide. The phase transfer condition is made by using tetra-n-butyl ammonium chloride as a catalyst.
Amantini et al, 2002,“Nucleophilic ring opening of 1, 2-epoxides in aqueous medium”, ARKIVOC describes nucleophilic ring-opening of 1,2- epoxides, including of benzene oxide-oxepin and naphthalene 1, 2-oxide.
Kluge et al, 2009,“Hydroxylation of naphthalene by aromatic peroxygenase from Agrocybe aegerita proceeds via oxygen transfer from H202 and intermediary epoxidation”, Appl. Microbiol Biotechnol (D2) describes the formation of (putative) naphthalene 1, 2-oxide in the hydroxylation of naphthalene with H2O2 as catalyzed by the Agrocybe aegerita peroxidase/peroxygenase.
May, 1979,“Enzymatic epoxidation reaction”, Enzyme Microb. Technol., reviews enzymatic epoxidation reactions involving the incorporation of molecular oxygen into organic molecules as catalyzed by oxygenases.
Karich et al, 2013,“Benzene oxygenation and oxidation by the peroxygenase of Agrocybe aegerita”, AMB Express, describes the AaeAPO- catalyzed oxygenation of benzene with H202 and subsequent re-aromatization to form phenol.
Agarwal et al, 1990, “Synthesis of arene oxide and trans- dihydrodiol metabolites of quinoline”, journal of the chemical society, describes the epoxidation of quinoline and subsequent rearrangement of the arene oxide to an alcohol as well as the formation of a hydro diol from quinoline via the arene oxide.
DE102007016139A1 describes the oygenation of an N-heterocycle to form a N-oxide.
SUMMARY OF THE INVENTION
Aromatic epoxides (“arene oxides”) may be valuable building blocks for chemical synthesis. Next to a NIH rearrangement (also“NIH shift” - named for the National Institutes of Health where the rearrangement was first reported) into corresponding aromatic alcohols, also nucleophilic epoxide ring opening may lead to a broad range of valuable aromatic epoxide derived compounds.
Their synthetic value, however, may be rather limited due to tedious, multistep synthetic protocols. Using (classical) chemical methods, direct epoxidation of aromatics may only be possible under extreme and/or harsh conditions, such as substantially acidic conditions, and therefore aromatic epoxides may not be accessible for preparative synthesis. Furthermore, the (classical) chemical methods may result in a large amount of waste, such as a large amount of halogen waste.
P450 monooxygenases, however, may directly epoxidise aromatic xenobiotics. Also with the mechanistically related peroxygenases, aromatic epoxide intermediates may be produced. The intermediate aromatic epoxide, however, may be considered to be too unstable to be of any synthetic use except as precursor for the corresponding aromatic alcohols (via NIH rearrangement).
Aromatic epoxides may be potentially useful chemical building blocks. However, known (chemical) synthesis methods, that may be used for the production of aromatic epoxides, may be considered tedious and dangerous. To the best of our knowledge, there is a very limited exploration and use of aromatic epoxides as substrates in chemical syntheses, if any.
Aromatic epoxides may, however, also be formed in biological systems. For example, the gene APOl of Agrocybe aegerita codes for an unspecific peroxygenase (also: “aromatic peroxygenase”). The unspecific peroxygenase may be able to catalyze a reaction between an aromatic compound and a peroxide leading to the formation of an aromatic alcohol. The aforementioned reaction may occur via an aromatic epoxide intermediate undergoing a NIH rearrangement. Such aromatic epoxide may generally be regarded to spontaneously undergo the NIH rearrangement leading to the formation of the aromatic alcohol. Indeed, leading biochemical databases such as KEGG, BRENDA, and Biocyc relate the activity of an unspecific peroxygenase (EC: 1.1 1.2.1) to the introduction of a hydroxyl-group rather than to the formation of an epoxide.
Hence, the application of aromatic epoxides as building blocks for further chemical syntheses may suffer from difficulties in their synthesis as well as an (alleged) lack of stability leading to the NIH rearrangement.
Hence, it is an aspect of the invention to provide an alternative production process for an aromatic epoxide derived compound (also“aromatic epoxide derived chemical”), which preferably further at least partly obviates one or more of above-described drawbacks. The present invention may have as object to overcome or ameliorate at least one of the disadvantages of the prior art, or to provide a useful alternative.
We have surprisingly discovered, however, that aromatic epoxides may be sufficiently stable for a nucleophilic attack using, for example, azide, thereby opening up the potential for the synthesis of a wide range of aromatic epoxide derived compounds.
The present invention relates to the formation of aromatic epoxide derived compounds, via the formation of an aromatic epoxide using an oxidoreductase, and a subsequent reaction involving a nucleophile - such as an azide ion - instead of the spontaneous isomerization to an aromatic alcohol. Therefore, in a first aspect the invention provides a production process for the production of an aromatic epoxide derived compound, the production process comprising: (i) an epoxidation stage comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in an aromatic epoxide, wherein the aromatic compound comprises an aromatic ring structure, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is especially selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases; (ii) a ring-opening stage comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound. In embodiments, the oxidoreductase may comprise an unspecific peroxygenase.
The invention as described herein may provide a wealth of novel synthesis opportunities as aromatic epoxides may have received little attention so far due to an alleged lack of stability. The ring-opening-stage (also: nucleophilic attack stage) following the epoxidation of the ring structure may be carried out by various nucleophiles, resulting in a variation of possible aromatic epoxide derived compounds for each potential starting aromatic compound. The aromatic epoxide derived compound may be further reacted with one or more reactants, resulting in a second aromatic epoxide derived compound. Several non-limiting examples hereof are highlighted in the embodiments.
The term '‘aromatic epoxide derived compound” is hereinafter especially used to refer both to the product of the ring-opening-stage, as well as to a “second aromatic epoxide derived compound”, i.e., any product of the production process as described herein may be referred to as“aromatic epoxide derived compound”. The term“second aromatic epoxide derived compound” is specifically used herein to refer to a compound resulting from one or more additional reactions following the ring-opening-stage.
The enzymatic epoxidation step may result in a substantially enantiomerically pure aromatic epoxide, which may further result in a substantially enantiomerically pure aromatic epoxide derived compound. The term “enantiomer” refers to a member of a pair of non-superimposable mirror-imaged compounds. As two enantiomers often have different biological functions, the relative abundance of one enantiomer is typically reported as enantiomeric excess (ee), wherein ee = | F+ - F.|, i.e., the absolute difference between the mole fractions of a first enantiomer (F+) and the corresponding second enantiomer (F-). A substantially enantiomerically pure compound may have an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1. The term“enantiomerically pure” refers to a compound (sample) consisting of a single enantiomer, i.e., a compound (sample) having an ee equal to 1. In embodiments, the production process as described herein may provide enantiomerically pure aromatic epoxide derived compounds.
The epoxidation stage comprises the oxidoreductase catalyzed epoxidation of an aromatic compound by a peroxide, resulting in the formation of an aromatic epoxide. Hence, the oxidoreductase may be configured to catalyze the epoxidation of the aromatic ring structure. In embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide in the presence of a first solvent for the aromatic compound. The first solvent may comprise one or more of a nonpolar solvent, a polar aprotic solvent, a polar protic solvent, and/or a supercritical solvent. In further embodiments, the first solvent may comprise one or more of a nonpolar solvent a polar aprotic solvent, or a supercritical solvent. In alternative embodiments, the first solvent may comprise an aqueous solvent.
In embodiments wherein the first solvent comprises a nonpolar solvent, the first solvent may comprise one or more solvents selected from the group consisting of pentane, cyclopentane, hexane, cyclohexane, benzene, toluene, l,4-dioxane, chloroform, diethyl ether, and dichlorom ethane.
In embodiments wherein the first solvent comprises a polar aprotic solvent, the first solvent may comprise one or more solvents selected from the group consisting of tetrahydrofuran, ethyl acetate, acetone, dimethylformamide, acetonitrile, dimethyl sulfoxide, nitromethane, and propylene carbonate.
In embodiments wherein the first solvent comprises a polar protic solvent, the first solvent may comprise one or more solvents selected from the group consisting of formic acid, n-butanol, isopropyl alcohol, n-propanol, ethanol, methanol, acetic acid, and water. In embodiments wherein the first solvent comprises a supercritical solvent, the first solvent may comprise e.g., scCCf (super critical C02).
In embodiments, the first solvent may comprise the aromatic compound. In further embodiments, the first solvent may consist of the aromatic compound. In alternative embodiments, the first solvent may be chosen such that the oxidoreductase does not catalyze epoxidation of the first solvent.
The epoxidation stage may comprise reacting the aromatic compound and the peroxide in the presence of an epoxidation reaction mixture, wherein the epoxidation reaction mixture comprises one or more of the aromatic compound, the peroxide, the peroxygenase, the first solvent, a first buffer, and a first salt. The epoxidation reaction mixture may be configured to provide specific reaction conditions, such as a specific pH and/or ionic strength. Hence, in embodiments the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH selected from the range of 5.0-8.5.
In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH selected from the range of 5.0-9.5. In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH <9.0, such as <8.5, especially <8.0, such as <7.5.
In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at an acidic pH, especially at a pH < 7, such as < 6.5, especially < 6.0. In further embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a pH > 5.0, such as > 5.5, especially >6.0.
In embodiments, the epoxidation stage may comprise reacting the aromatic compound and the peroxide at about a first temperature. In further embodiments, the first temperature may especially be selected from the range of 0-45 °C, more especially from the range of 20-45 °C. Hence, in embodiments the epoxidation stage may comprise reacting the aromatic compound and the peroxide at a temperature selected from the range of 0-45 °C.
An epoxide is especially defined as a cyclic ether with a three-atom ring structure, e.g., a compound with the formula R1-O-R2, or including a group with such formula, wherein Ri and Ri are also covalently bonded. Hence, an epoxide comprises an epoxide group of an O and 2 other atoms, wherein each of the three atoms is covalently bonded to the other two. The term“aromatic epoxide” herein especially refers to a compound obtainable by the introduction of an epoxide group in an aromatic ring structure, i.e., both atoms covalently bonded to oxygen after epoxidation were part of an aromatic ring structure prior to epoxidation. Hence, the oxidoreductase may catalyze the epoxidation of the aromatic ring structure. Ri and R2 are independently selected from carbon comprising (organic) groups, wherein a carbon atom is bonded to the O atoms of the respective organic compounds of the epoxide. Hence, an epoxide may also be defined as a compound with the formula (Ra,Rb)Cl-0-C2(Rc,Rd), or including a group with such formula, wherein Cl and C2 are covalently bonded, and wherein Ra, Rb, Rc, and Rd are each independently e.g. selected from H and a hydrocarbon.
Aromatic compounds may be well known, and may be very stable. In general, a compound has to meet four criteria in order to be considered aromatic: (i) the compound comprises a delocalized conjugated p system (commonly depicted as alternating single and double bonds), (ii) the compound comprises a coplanar structure, with all atoms contributing to the conjugated p system in the same plane, (iii) the compound comprises an aromatic ring structure comprising the atoms contributing to the delocalized conjugated p system in one or more rings, (iv) the compound comprises 4n+2 delocalized p electrons, wherein n is a non negative integer (Huckel's rule).
The aromatic compound herein especially comprises an aromatic ring structure. In embodiments, the aromatic compound may comprise one or more of C, N, P, O or any other (ring) element. In further embodiments, the aromatic compound may comprise an aromatic hydrocarbon. In general, in embodiments the aromatic compound comprises at least H and C, However, embodiments wherein the aromatic compound does not comprise H and/or C are not excluded. For example, the aromatic compound may comprise pentazole (HN5), or hexachlorobenzene. In embodiments, the aromatic ring staicture may comprise one or more different elements, especially one or more of C, N, O, S, Sn, Si, B, Se and P. In specific embodiments, the aromatic ring structure may comprise two or more different elements, i.e., the aromatic ring structure may comprise a heterocyclic ring structure. Especially, the aromatic ring staicture may comprise C and one or more of N, O, S, Sn, Si, B, and Se, such as one or or more of O, S, Sn, Si, B, Se, more especially O. In alternative embodiments, the aromatic ring structure may consist of a plurality of atoms of the same type of one element, especially of C or N, i.e., in embodiments the aromatic ring staicture may comprise a homocyclic ring structure. Hence, in embodiments, the aromatic ring structure may consist of carbon atoms.
The term“aromatic ring structure” used herein especially refers to the ring staicture and not to the side groups. Hence, the aromatic compound comprises an aromatic ring structure having side groups. For example, the aromatic ring structures of benzene and toluene both consists of six C, whereas the aromatic ring staicture of naphthalene consists of ten C, and the aromatic ring structure of furan consists of four C and one O.
In embodiments, the side groups of the aromatic ring structure may comprise one or more different elements. Especially, the aromatic ring structure may have one or more side groups independently selected from the group comprising H, C¾, Cl, Br, I, OC¾, CFs, F, CN, N02, NH2, CONH2, COCTE, NHR, OCH2CH3, OH, more especially one or more side groups independently selected from the group comprising C¾, Cl, Br, I, OCH3, CF3, F, CN, N02, NH2, CONH , COCH:,, NHR, OCH2CH3, and OH, such as one or more side groups independently selected from the group comprising CHs, Cl, Br, OCH3, CF3, and F. Especially, one or more side groups of the aromatic ring structure may consist of H, such as two or more (adjacent) side groups. More especially, all side groups of the aromatic ring staicture may consist of H.
In specific embodiments, the aromatic compound may comprise one or more of naphthalene, l-chloronaphthalene, benzene, aniline, toluene, phenanthrene, pyrene, p-nitrophenol, pyridine, dibenzofuran, anthracene, chrysene, fluoranthrene, fluorine, corannulene, coronene, hexahelicene.
The peroxide comprises a compound selected from the group of compounds having the formula R1-O-O-R2, wherein Ri and R2 refer to side groups comprising any elements, especially side groups comprising C and/or H, more especially side groups consisting of H. Hence, in embodiments the peroxide may comprise H2O2. In further embodiments, the epoxidation step may comprise reacting the aromatic compound and the peroxide in the presence of an H2O2 source, such as one or more compounds selected from the group consisting of carbamide peroxide, sodium percarbonate, ammonium peroxydi sulfate, organic hydroperoxides (e.g. acetone peroxide, acetyl acetone peroxide, acetozone (acetyl benzoyl peroxide), ascaridole, alkenyl peroxides, tert-butyl hydroperoxide, bis(trimethylsilyl) peroxide, cumene hydroperoxide, di-(l-naphthoyl)peroxide, diacetyl peroxide, di-tert-butyl peroxide (dtbp), dimethyldioxirane (dmdo), dioxirane, dipropyl peroxydi carbonate, ethyl hydroperoxide, iodoxy compounds, magnesium monoperoxy-phthalate, methyl ethyl ketone peroxide, methyl isobutyl ketone peroxide, meta-chloroperoxybenzoic acid (mcpba), tert-butyl peroxybenzoate (tbpb), paramenthane hydroperoxide (pmhp), peracetic acid, performic acid, peroxyacyl nitrates, and peroxybenzoic acid). Hence, in embodiments, the first reaction mixture may further comprise an H2O2 source.
Oxidoreductases are a large class of enzymes generally catalyzing reactions involving the transfer of electrons. Of specific interest herein are those oxidoreductases that catalyze reactions further involving the introduction of O into an organic molecule, such as reactions catalyzed by subclasses of oxidoreductases such as oxidases, peroxidases, oxygenases, and peroxygenases. Hence, in embodiments of the invention the oxidoreductase may be selected from the group consisting of oxidases, peroxidases, oxygenases and peroxygenases. It will be clear to one skilled in the art that the invention is not limited to the use of oxidoreductase (classified as) belonging to any one of the aforementioned subclasses. It will further be clear to one skilled in the art that not each enzyme belonging to the aforementioned subclasses will catalyze the epoxidation of an aromatic ring structure. Hence, it will be clear to one skilled in the art that the invention relates to any oxidoreductase that catalyzes the epoxidation of an aromatic ring staicture.
Oxidases may catalyze oxidation-reduction reactions, especially oxidation-reduction reactions involving O2. At least part of the oxidases may catalyze a reaction involving the introduction of an oxygen into an organic compound. For example, cytochrome P450 oxidase may catalyze a monooxygenase reaction of the form RH + 02 + NADPH + H1
Figure imgf000012_0001
ROH + H20 + NADP+. Similarly, a xanthine oxidase may catalyze a reaction of the form RH +
Figure imgf000012_0002
ROH + 2O2 + 2H+. In specific instances, the introduction of oxygen in an organic compound may occur via an epoxide intermediate.
Peroxidases may typically catalyze reactions of the form R1OOR2 + 2e + 2H+
Figure imgf000012_0003
RiOH + R2OH. At least part of the peroxidases may catalyze a reaction involving the introduction of an oxygen into an organic compound. For example, a peroxidase may catalyze a reaction selected from the group comprising Baeyer-Villiger oxidations, oxidations of styrene derivatives to corresponding ketones, and oxidations of sulfides to sulfoxides and sulfones.
Oxygenases may catalyze reactions involving the transfer of an oxygen atom from O2 to a substrate, especially to an organic compound. Oxygenases may be further classified into (i) monooxygenases, such as the aforementioned cytochrome P450 oxidase, which introduce one oxygen atom into a substrate, and (ii) dioxygenases which introduce both oxygen atoms from 02 into a substrate. In specific instances, the introduction of oxygen may occur via an epoxide intermediate.
Peroxygenases may catalyze reactions involving the transfer of an oxygen atom from a peroxide to a substrate, especially to an organic compound. Hence, peroxygenases may typically catalyze a reaction of the form RiH + R2OOH - RiOH + R2OH, especially wherein R2 consists of H. In specific instances, the introduction of oxygen may occur via an epoxide intermediate. In
embodiments, the oxidoreductase may comprise one or more of a cytochrome P450 enzyme, a heme-dependent and/or a vanadium-dependent oxygenase, a catalase, an unspecific peroxygenase (Enzyme Classification (EC) 1.1 1.2.1), a peroxidase (EC 1.11.1.7), a chloride peroxidase (EC 1.11.1. 10) and a bromide peroxidase (EC 1.11.1.18), especially one or more of an unspecific peroxygenase, a peroxidase, a chloride peroxidase, and a bromide peroxidase, more especially an unspecific peroxygenase. In embodiments wherein the oxidoreductase comprises an unspecific peroxygenase, the unspecific peroxygenase and/or a gene encoding the unspecific peroxygenase may be derived from one or more organisms selected from the group comprising Agrocybe aegerita, Agrocybe acericola, Agrocybe ainara, Agrocybe aivalis, Agrocybe cylindracea, Agrocybe dura, Agrocybe erebia, Agrocybe farinacea, Agrocybe jinua, Agrocybe molesta, Agrocybe paludosa, Agrocybe parasitica, Agrocybe pediades, Agrocybe praecox, Agrocybe piitaminum, Agrocybe re tiger a, Agrocybe semiorb icidcuis, Agrocybe sororia, Agrocybe vervacti, Coprinelhis radians, Coprinellus amphithallus, Coprinellus angulatus, Coprinellus aureogranulatus, Coprinellus bipellis, Coprinelhis bisporiger, Coprinellus bisporus, Coprinellus callinus, Coprinellus coiigi-egates, Coprinellus curtus, Coprinellus deliquescens, Coprinellus deminutus, Coprinellus dilectus, Coprinellus disseminatus, Coprinellus domesticus, Coprinellus ellisii, Coprinellus ephemerus, Coprinellus flocculosus, Coprinellus heptemerus, Coprinellus heterosetulosus, Copinellus hiascens, Coprinellus inipatiens, Coprinellus marculentus, Coprinellus mitr moduli spor us, Coprinellus pellucidus, Coprinellus plagioporus, Coprinellus pyrrhanthes, Coprinellus radians, Coprinellus sassii, Coprinellus sclerocystidiosus, Coprinellus subdisseminatus, Coprinellus subimpatiens, Coprinellus subpurpureus, Coprinellus truncoruni, Coprinellus velatopruinatus, Coprinellus verrucispei-imis, Coprinellus xcnithothrix, Coprinopsis cinerea, Mai'asmius rotida, and Sulfolobus tokodaii. Especially, the unspecific peroxygenases and/or gene encoding the enzyme may be derived from one or more organisms selected from the group consisting of Agrocybe aegerita, Coprinellus radians, Marasmius rotula and Sulfolobus tokodaii.
In embodiments wherein the oxidoreductase comprises a peroxidase, the peroxidase and/or a gene encoding the peroxidase may be derived from one or more organisms selected from the group comprising Acorns calamus, Aedes aegypti, Aggegatibacter actinomycetemcomitaiis, Allium sativum, Arabidopsis thalicnia, Arachis hypogaea, Armoracia rusticana, Arthromyces ramosus, Arundo donax, Beta vidgaris, Bjerkandera adusta, Bos tauriis, Brassica napus, Brassica oleracea, Brassica rapa, Bubalus bubali, Butia capitata, Camellia sinensis, Capra hircus, Capsiam anmmm, Catharantns roseus, Chromolaena odorata, Cicer anetinmn, Coprinopsis drier ea, Cudmiis melo, Ciicumis melo var, inodorus, Cynara cardnnculiis, Elaeis giiineensis, Elizabethkingia meningoseptica, Escherichia coli, Euphorbia characias, Fagopyrtmi esc lentum, Fragaria vesca, Fragaria x ananassa, Glycine max, Gossypiwv hirsutum, Helianthus annuus, Homo sapiens, Hordeum vulgare, Ipomoea batatas, Ipomoea caniea, Jubaea chilensis, Landoltia punctata, Leptogium saturninum, Mains x domestica, Mentha arvensis, Momordica charantia, Mns musculus, Mycobacterium tuberculosis, Neurospora crassa, Nicotiana sylvestris, Nicotiana tabacum, Oryza sativa, Ovis aries, Pelargonium gim eolens, Plasmodium falciparum, Pleurotus eryngii, Pleurotus ostreatus, Primus per ica, Pyrococcus furiosus, Raphanus sativus, Ratius non'egicus, Roystonea regia, Ruegeria pomeroyi DSS-3, Saba/ minor, Sclerocarya birrea, Scutellaria baicalensis, Senecio squalidus, Sesbania rosfata, Solwmm lycopersicum, Solarium melongena, Sorghum bicolor, Sphagimm magellanicum, Sti-eptomyces thermoviolaceus, Sulfolobus acidocaldarius, Sus scrofa, Trachycarpus fortunei, Triticum aestivum, Vitis vinifera, Washingtonia filifera, and Yersinia pseudotuberculosis.
In embodiments wherein the oxidoreductase comprises a chloride peroxidase, the chloride peroxidase and/or a gene encoding the chloride peroxidase may be derived from one or more organisms selected from the group comprising Caldariomyces fumago, Aspergillus niger, Bazzania tiilobata, Musa paradisiaca, and Streptomyces toyocaensis.
In embodiments wherein the oxidoreductase comprises a bromide peroxidase, the bromide peroxidase and/or a gene encoding the bromide peroxidase may be derived from one or more organisms selected from the group comprising Agocybe aegerita, Ascophyllum nodosum, Corallina officinalis, Corallina pilulifera, Delisea pulchra, Ecldonia stolonifera, Fucus distichus, Gracilaria changii, Homo sapiens, Kappaphycus alvaiezii, Laminaria hyperborea, Macrocystis pyrifera, Ochtodes secundiramea, Pseudomonas fluorescens, Pseudomonas putida, Saccharina latissima, Sti-eptomyces aureojaciens, Sti-eptomyces gi-isens, Sti-eptomyces veneziielae, and Syiiechococcus sp.
It will be clear to one skilled in the art that the invention is not limited to the use of a native oxidoreductase of any one of the organisms specifically mentioned herein. Rather, the oxidoreductase may comprise an oxidoreductase of an organism not specifically mentioned herein, especially wherein the enzyme is homologous to an oxidoreductase of any one of the mentioned organisms. Alternatively or additionally, the oxidoreductase may comprise a mutant oxidoreductase, such as a mutant oxidoreductase comprising one or more amino acid substitutions, deletions and/or additions relative to a native oxidoreductase, especially wherein the mutant oxidoreductase is specifically designed through protein engineering.
In specific embodiments, the oxidoreductase may comprise a mutant unspecific peroxygenase. For example, the oxidoreductase may comprise one or more of the PaDa-I, the JaWa, and the Solo mutants of the unspecific peroxygenase of A grocybe aegerita as described in Molina-Espeja et al. 2016 ChemBioChem and in WO2017081355A1. In further embodiments, the oxidoreductase may comprise the Jed-I mutant of the unspecific peroxygenase of of Agrocybe aegerita as described in Ramirez-Escudero et al. 2018 ACS chemical biology. Hence, in embodiments, the oxidoreductase may comprise a wildtype and/or mutant unspecific peroxygenase, especially a wildtype and/or mutant unspecific peroxygenase of Agrocybe aegerita, more especially one or more of the PaDa-I, the JaWa, the Solo, and the Jed-I mutants of the unspecific peroxygenase of Agrocybe aegerita.
In embodiments, the oxidoreductase may be provided via one or more micro-organisms producing the oxidoreductase, or via an addition of isolated oxidoreductase. Herein the term“isolated oxidoreductase” refers to biologically, especially microbially, produced oxidoreductase that has been isolated from the production organism. The isolated oxidoreductase may essentially comprise purified oxidoreductase. In general, embodiments of the invention involve the use of isolated oxidoreductase. In embodiments, the oxidoreductase may be produced by an organism naturally producing the oxidoreductase. Alternatively or additionally, the oxidoreductase may be produced by a genetically modified organism. For example, in an embodiment the unspecific peroxygenase apol gene of Agrocybe aegerita is heterologously expressed in Pichia pastohs X-33, which exports the Apol protein (the unspecific peroxygenase) into a medium, for example into a liquid (growth) medium. In alternative embodiments, the oxidoreductase may be produced by an organism naturally producing the oxidoreductase, especially wherein the organism exports the oxidoreductase into a medium. In further embodiments, the oxidoreductase may be isolated from the medium to obtain an isolated oxidoreductase. For example, the media comprising (microbial) cells and oxidoreductase may be centrifuged such that the cells precipitate while the oxidoreductase remains in the supernatant. The supernatant comprising the oxidoreductase may be used as a caide enzyme preparation in the epoxidation stage, i.e., in embodiments the oxidoreductase may be provided as crude enzyme preparation. The oxidoreductase may also be further purified from the crude enzyme preparation, i.e., in embodiments the oxidoreductase may be provided in purified form. Methods for heterologous gene expression, protein production, protein isolation, and protein purification will be known by a person skilled in the art.
The ring-opening stage comprises reacting the aromatic epoxide (of the epoxidation stage) and a nucleophile, resulting in an aromatic epoxide derived compound. Especially, the ring-opening stage may comprise a nucleophilic substitution reaction at the epoxide group (“ring-opening reaction”), especially at an element bonded to O. The nucleophilic substitution reaction may comprise an SNl or an SN2 type reaction.
The ring-opening stage may comprise reacting the aromatic epoxide and the nucleophile in the presence of a ring-opening reaction mixture, wherein the ring-opening reaction mixture may comprise one or more of the aromatic epoxide, the nucleophile, a second solvent, a second buffer, a second salt, and a second enzyme. The ring-opening reaction mixture may be configured to provide specific reaction conditions, such as a specific pH and/or ionic strength. In embodiments, the ring-opening reaction mixture may further be configured to catalyze the nucleophilic substitution reaction, especially the second enzyme may catalyze the nucleophilic substitution reaction.
In embodiments, the ring-opening stage may comprise reacting the aromatic epoxide and the nucleophile at about a second temperature. In further embodiments, the second temperature may especially be selected from the range of 0-60°C, more especially from the range of 20-50 °C.
A nucleophile is a chemical compound that can donate an electron pair to an electrophile to form a chemical bond, especially a covalent bond. In embodiments of the invention, the aromatic epoxide, especially the epoxide group, comprises the electrophile. In embodiments, the nucleophile may comprise one or more of N3 , CN , SCN\ OCN\ S2 , ROH, RCT, Cf, Br\ G, HCOri, N02 , CTBCOA , CH3COS-, (CH3CH2)3N, (CHSCH^P, NH3, H2S, RNH2, RNHRf R-SH, PhSH, PhSeH, or PhOH, wherein Ph refers to a phenyl group, and wherein R and R’ independently refer to a chemical group comprising any elements but not being directly involved in the reaction. In further embodiments, the nucleophile may comprise one or more of Ns , HC02 , CN , NO A OCN , SCN , PhNCS, and HCO2-.
In embodiments, the production process may further comprise a synthesis stage. The synthesis stage may comprise reacting the aromatic epoxide derived compound with one or more reactants, resulting in a second aromatic epoxide derived compound. Hence, the synthesis stage may comprise a synthesis reaction comprising reacting the aromatic epoxide derived compound with one or more reactants, resulting in a second aromatic epoxide derived compound. Especially, the synthesis stage may comprise a plurality of successive (synthesis) reactions, i.e., the synthesis stage may comprise successively reacting the aromatic epoxide derived compound with one or more reactants.
The synthesis stage may comprise reacting the aromatic epoxide derived compound and the one or more reactants in the presence of a synthesis reaction mixture, wherein the synthesis reaction mixture may comprise one or more of the aromatic epoxide derived compound, the one or more reactants, a third solvent, a third buffer, a third salt, and a third enzyme. In embodiments, the synthesis reaction mixture may further be configured to catalyze the synthesis reaction, especially the third enzyme may catalyze the synthesis reaction. The synthesis reaction mixture may be configured to provide specific reaction conditions, such as a specific pH, temperature, chemical catalyst and/or ionic strength. The term“synthesis reaction mixture” may also refer to a plurality of synthesis reaction mixtures. Especially, in embodiments, the synthesis stage may comprise a plurality of successive reactions, wherein at least two of the successive reactions occur in the presence of two different synthesis reaction mixtures.
In embodiments, the synthesis stage may comprise reacting the aromatic epoxide derived compound and the one or more reactants at about a third temperature. In further embodiments, the third temperature may especially be selected from the range of 0-100 °C, more especially from the range of 25-70 °C.
In a second aspect, the current invention also provides an enantiomerically pure aromatic epoxide derived compound obtainable by the production process as described herein. Especially a substantially enantiomerically pure aromatic epoxide derived compound, such as an aromatic epoxide derived compound having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95- 1. In embodiments, the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure. Especially, the term enantiomerically pure refers to all molecules in a sample having the same chirality sense, especially the same chirality sense within detection limits.
In embodiments, the (substantially) enantiomerically pure aromatic epoxide derived compound may comprise a product of the synthesis stage, i.e., the (substantially) enantiomerically pure aromatic epoxide derived compound may comprise the second aromatic epoxide derived compound.
In embodiments, the aromatic epoxide derived compound may comprise one or more of (l S,6S)-6-azidocyclohexa-2,4-dien-l-ol, (l S,6S)-6- aminocyclohexa-2,4-dien-l-ol, (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol,
( lR,6R)-6-aminocyclohexa-2,4-dien- 1 -ol, ( lR,2R)- 1 -azido- 1 ,2-dihydronaphtha- len-2-ol, ( lR,2R)- 1 -amino- 1 ,2-dihydronaphthalen-2-ol, ( 1 S,2S)-2-azido- 1 ,2- dihydronaphthalen- 1 -ol, (1 S,2S)-2-amino- 1 ,2-dihydronaphthalen- 1 -ol, ( lR,2R)- 1 -azido- 1 ,2-dihydroanthracen-2-ol, ( lR,2R)- 1 -azido- 1 ,2-dihydrophenanthren-2- ol, and (3R,4S)-4-azido-3,4-dihydrodibenzo[b,d]furan-3-ol.
In embodiments, two or more of the epoxidation stage, the ring- opening-stage and the synthesis stage may be temporally and/or spatially separated. Hence, in embodiments the epoxidation stage and the ring-opening stage may be temporally and/or spatially separated. Alternatively or additionally, the ring-opening stage and the synthesis stage may be temporally and/or spatially separated. The temporal and/or spatial separation may be beneficial as suitable, especially optimal, reaction conditions may differ for the different stages. For example, in embodiments the nucleophile reacting in the ring-opening stage may negatively affect the performance of the oxidoreductase in the epoxidation stage.
In further embodiments, the epoxidation stage and the ring-opening stage may be temporally separated. Especially, the epoxidation stage may last for an epoxidation stage time. The epoxidation stage time may be selected such that there is sufficient enzymatic conversion of the aromatic compound to the aromatic epoxide, while there is a limited spontaneous conversion of the aromatic epoxide to the aromatic alcohol (via the NIH-shift).
In embodiments wherein the synthesis stage comprises a plurality of successive reactions, the successive reactions may be spatially and/or temporally separated. Hence, in embodiments, the synthesis reaction mixture may comprise a plurality of synthesis reaction mixtures which are used in succession.
In embodiments, one or more of the epoxidation reaction mixture, the ring-opening reaction mixture and the synthesis reaction mixture may be periodically or continuously adjusted. For example, the pH of the epoxidation (ring-opening / synthesis) reaction mixture may be modified during the process.
In embodiments, the epoxidation stage may comprise supplying the aromatic compound and the peroxide to an enzyme reactor comprising oxidoreductase, wherein the enzyme reactor is configured to provide the aromatic epoxide to a nucleophile reaction unit, and wherein the ring-opening stage comprises reacting the aromatic epoxide and the nucleophile in the nucleophile reaction unit. In a further embodiment, the enzyme reactor may comprise immobilized oxidoreductase. In further or alternative embodiments, the nucleophile reaction unit may be in fluid connection with an external recovery loop, wherein contents of the nucleophile reaction unit continuously or periodically pass through the external recovery loop, and wherein the external recovery loop is configured to return the aromatic epoxide and the nucleophile to the nucleophile reaction unit and to remove the aromatic epoxide derived compound. In further embodiments, the external recovery loop may comprise an aromatic epoxide derived compound tubing and an external recovery loop reactor. The aromatic epoxide derived compound tubing may be configured to provide a fluid contact between the nucleophile reaction unit and the external recovery loop reactor. The external recovery loop reactor may be configured to enable the in situ removal of the produced aromatic epoxide derived compound, especially to enable the in situ removal of the produced aromatic epoxide derived compound on a solid phase. Additionally or alternatively, the external recovery loop may be configured to return the nucleophile back to the nucleophile reaction unit. Yet additionally or alternatively, the external recovery loop may be configured to return the aromatic epoxide back to the nucleophile reaction unit. Hence, in embodiments, the external recovery loop reactor may be configured to enable the in situ removal of the produced aromatic epoxide derived compound while simultaneously returning the nucleophile and/or the aromatic epoxide back to the nucleophile reaction unit, especially the nucleophile and the aromatic epoxide. In alternative or further embodiments, the external recovery loop reactor may comprise an outlet configured for the release of the aromatic epoxide derived compound.
In yet further or alternative embodiments, the nucleophile reaction unit or the external recovery loop provides the aromatic epoxide derived compound to a synthesis reaction unit, wherein the synthesis stage comprises reacting the aromatic epoxide derived compound and the one or more reactants in the synthesis reaction unit.
In yet further or alternative embodiments, the synthesis reaction unit may be in fluid connection with a third external recovery loop, wherein contents of the synthesis reaction unit continuously or periodically pass through the third external recovery loop, and wherein the third external recovery loop is configured to return the aromatic epoxide derived compound and the one or more reactants to the synthesis reaction unit and to remove the second aromatic epoxide derived compound.
In yet further or alternative embodiments, the enzyme reactor may - during use - comprise a first reaction mixture and/or the nucleophile reaction unit may - during use - comprise a second reaction mixture and/or the synthesis reaction unit may - during use - comprise a third reaction mixture.
In yet further or alternative embodiments, the enzyme reactor may comprise a first inlet configured to supply a component of the first reaction mixture, especially all components of the first reaction mixture. Alternatively or additionally, the nucleophile reaction unit may comprise a second inlet configured to supply a component of the second reaction mixture. Alternatively or additionally, the synthesis reaction unit may comprise a third inlet configured to supply a component of the third reaction mixture.
In further embodiments, the first inlet may be functionally coupled to one or more tubings. For example, the first inlet may be functionally coupled to an aromatic compound inlet tubing supplying the aromatic compound and/or to a peroxide inlet tubing supplying the peroxide. In embodiments, the aromatic compound inlet tubing may be configured to provide a fluid connection between the first inlet and an aromatic compound source. It will be clear to a person skilled in the art that each of the inlets may be functionally coupled to one or more tubings providing one or more components of a reaction mixture.
In further or alternative embodiments, the enzyme reactor and the nucleophile reaction unit may be functionally coupled through an aromatic epoxide tubing. The aromatic epoxide tubing may be configured to provide the aromatic epoxide to the nucleophile reaction unit from the enzyme reactor. In yet further or alternative embodiments, tubing may be arranged between the nucleophile reaction unit and one or more device elements selected from the group comprising the external recovery loop, the external recovery loop reactor, and the synthesis reactor, especially wherein the tubing is configured to provide a fluid connection between the nucleophile reaction unit and the device element. In yet further or alternative embodiments, tubing may be arranged between two synthesis reactors, especially wherein the tubing is configured to provide a fluid connection between the two synthesis reactors.
The production process may be part of or may be applied in e.g. the synthesis of bulk and/or specialty chemicals comprising, for example, triazole compounds, aromatic azides, amino alcohols, and aromatic amines, with applications, for example, as active pharmaceutical ingredients, agrochemicals, pharmaceutical therapeutics, antibiotics, medicine, and fluorescence probes, dyes, and antioxidants, and as substrates for further organic syntheses.
In a third aspect, the invention also provides a production process for producing an aromatic epoxide, the process comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in the aromatic epoxide, wherein the aromatic compound comprises an aromatic ring structure, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is especially selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases. In a fourth aspect, the invention also provides a product obtainable by such production process. The herein described embodiments - as far as related to the epoxidation stage - may also apply to these aspects of the invention.
In a fifth aspect, the invention also provides a production process for producing an aromatic epoxide derived compound, the process comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound. In a sixth aspect, the invention also provides a product obtainable by such production process.
The herein described embodiments - as far as related to the ring opening stage - may also apply to these aspects of the invention. Hence, the embodiments described herein are not limited to a single aspect of the invention. For example, an embodiment describing an epoxidation step may be an embodiment of the first aspect as well as of the third aspect, and a product mentioned in relation to such embodiment may further relate to the second, fourth and optionally sixth aspect of the invention. The method of the invention may further facilitate the production of new compounds. Specifically, the invention may provide aromatic epoxide derived compounds.
Hence, in a further aspect, the invention provides an aromatic epoxide derived compound selected from the group consisting of 1 -azido- 1,2- dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido- 5-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-(trifluorom ethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2-dihydronaphthalen- 1 -ol, 1 -azido-5-fluoro- 1 ,2-dihydronaphthalen-2-ol, 2- azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-bromo- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-8-bromo-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol,
4-azido-3,4-dihydrodibenzo[b,d]furan-3-ol, 1 -azido- l,2-dihydrophenanthren-2- ol, l-azido-l,2-dihydroanthracen-2-ol, 6-azidocyclohexa-2,4-dien-l-ol, 6-azido-
5-bromocyclohexa-2,4-dien-l-ol, 6-azido-5-chlorocyclohexa-2,4-dien-l-ol, 6- azido-2-methylcyclohexa-2,4-dien- 1 -ol, 6-azido-4-methylcyclohexa-2,4-dien- 1 - ol, 6-azido-2-methoxycyclohexa-2,4-dien- 1 -ol, 1 -hydroxy- 1 ,2- dihydronaphthalen-2-yl formate, 1 -hydroxy- 1 ,2-dihydronaphthalene-2- carbonitrile, l-hydroxy-l,2-dihydronaphthalen-2-yl nitrate, 2-(isocyanooxy)-l,2- dihydronaphthalen-l-ol, 2-thiocyanato-l,2-dihydronaphthalen-l-ol, phenyl (E)- N-( 1 -hydroxy- 1 ,2-dihydronaphthalen-2-yl)methanimidothioate, 5-chloro- 1 - hydroxy- 1 ,2-dihydronaphthalen-2-yl formate,
( 1 S,6S)-6-azidocyclohexa-2,4-dien- 1 -ol, ( 1 S,6S)-6-aminocyclohexa-2,4-dien- 1 - ol, azidobenzene, (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol, (lR,6R)-6- aminocyclohexa-2,4-dien- 1 -ol, ( lR,2R)- 1 -azido- 1 ,2-dihydronaphthalen-2-ol,
( lR,2R)- 1 -amino- 1 ,2-dihydronaphthalen-2-ol, 1 -azidonaphthalene, ( 1 S,2S)-2- azido-5-bromo-l,2-dihydronaphthalen-l-ol, (l S,2S)-2-amino-5-bromo-l,2- dihydronaphthalen- 1 -ol, 1 -azido-5-bromonaphthalene, (lR,2R)- 1 -azido- 1 ,2- dihydroanthracen-2-ol, (3R,4S)-4-azido-3,4-dihydrodibenzo[b,d]furan-3-ol, and ( lR,2R)- 1 -azido- 1 ,2-dihydrophenanthren-2-ol.
In embodiments, the aromatic epoxide derived compound may be selected from the group consisting of 1 -azido- l,2-dihydronaphthalen-2-ol, 2- azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-methyl- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido- 5-(trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2- dihydronaphthalen- l-ol, l-azido-5-fluoro-l,2-dihydronaphthalen-2-ol, 2-azido-5- chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-bromo- 1 ,2-dihydronaphthalen- 1 - ol, 2-azido-8-bromo-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol, 4-azido-3 ,4- dihydrodibenzo[b,d]furan-3 -ol, 1 -azido- 1 ,2-dihydrophenanthren-2-ol, 1 -azido- l,2-dihydroanthracen-2-ol, 6-azidocyclohexa-2,4-dien-l-ol, 6-azido-5- bromocyclohexa-2,4-dien- 1 -ol, 6-azido-5-chlorocyclohexa-2,4-dien- 1 -ol, 6- azido-2-methylcyclohexa-2,4-dien- 1 -ol, 6-azido-4-methylcyclohexa-2,4-dien- 1 - ol, 6-azido-2-methoxycyclohexa-2,4-dien-l-ol, 5-azido-4,5-dihydropyren-4-ol, 1- hydroxy-l,2-dihydronaphthalen-2-yl formate, 1 -hydroxy- 1,2- dihydronaphthalene-2-carbonitrile, 1 -hydroxy- 1 ,2-dihydronaphthalen-2-yl nitrate, 2-(isocy anooxy)- 1 ,2-dihydronaphthalen- 1 -ol, 2-thiocyanato- 1 ,2- dihydronaphthalen- 1 -ol, phenyl (E)-N-( 1 -hydroxy- 1 ,2-dihydronaphthalen-2- yl)methanimidothioate, and 5-chloro- 1 -hydroxy- 1 ,2-dihydronaphthalen-2-yl formate.
In further embodiments, the aromatic epoxide derived compound may comprise 5-azido-4,5-dihydropyren-4-ol.
In further embodiments, the aromatic epoxide derived compound may be (substantially) enantiomerically pure, having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1. In embodiments, the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure.
In a further aspect, the invention provides a derivative of an aromatic epoxide derived compound selected from the group consisting of 1- azido- 1 ,2-dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-5-(trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2-dihydronaphthalen- 1 -ol, 1 -azido-5-fluoro- 1 ,2- dihydronaphthalen-2-ol, 2-azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6- bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-8-bromo-5-chloro- 1,2- dihydronaphthalen- 1 -ol, 4-azido-3 ,4-dihydrodibenzo[b,d]furan-3 -ol, 1 -azido- 1 ,2- dihydrophenanthren-2-ol, 1 -azido- 1 ,2-dihydroanthracen-2-ol, 6-azidocyclohexa- 2,4-dien- 1 -ol, 6-azido-5-bromocyclohexa-2,4-dien- 1 -ol, 6-azido-5- chlorocyclohexa-2,4-dien- 1 -ol, 6-azido-2-methylcyclohexa-2,4-dien- 1 -ol, 6- azido-4-methylcyclohexa-2,4-dien- 1 -ol, 6-azido-2-methoxycyclohexa-2,4-dien-
1-ol, l-hydroxy-l,2-dihydronaphthalen-2-yl formate, 1 -hydroxy- 1,2- dihydronaphthalene-2-carbonitrile, 1 -hydroxy- 1 ,2-dihydronaphthalen-2-yl nitrate, 2-(isocy anooxy)- 1 ,2-dihydronaphthalen- 1 -ol, 2-thiocyanato- 1 ,2- dihydronaphthalen- 1 -ol, phenyl (E)-N-( 1 -hydroxy- 1 ,2-dihydronaphthalen-2- yl)methanimidothioate, 5-chloro- 1 -hydroxy- 1 ,2-dihydronaphthalen-2-yl formate,
( 1 S,6S)-6-azidocyclohexa-2,4-dien- 1 -ol, ( 1 S,6S)-6-aminocyclohexa-2,4-dien- 1 - ol, azidobenzene, (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol, (lR,6R)-6- aminocyclohexa-2,4-dien- 1 -ol, ( lR,2R)- 1 -azido- 1 ,2-dihydronaphthalen-2-ol,
( lR,2R)- 1 -amino- 1 ,2-dihydronaphthalen-2-ol, 1 -azidonaphthalene, ( 1 S,2 S)-2- azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol, ( 1 S,2 S)-2-amino-5-bromo- 1 ,2- dihydronaphthalen- 1 -ol, 1 -azido-5-bromonaphthalene, (lR,2R)- 1 -azido- 1 ,2- dihydroanthracen-2-ol, (3R,4S)-4-azido-3,4-dihydrodibenzo[b,d]furan-3-ol, and ( lR,2R)- 1 -azido- 1 ,2-dihydrophenanthren-2-ol.
In a derivative of an aromatic epoxide derived compound one or more of the H groups (connected to the aromatic ring structure) may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF3, CFb, C2H5, NO2, CºN, and CI+XH3+2XO. Especially, one or more of the H side groups of the aromatic ring staicture may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF¾, CFE, C2H5, NO2, CºN, and C I ÷XHV 2\0. More especially, a single H group may be replaced with a side group selected from the group comprising F, Cl, Br, I, CF3, CEE, C2H5, NO2, CºN, and (Ί J F : >.
In embodiments, the derivative may comprise a derivative of an aromatic epoxide derived compound selected from the group consisting of 1- azido- 1 ,2-dihydronaphthalen-2-ol, 2-azido-5-bromo- 1 ,2-dihydronaphthalen- 1 -ol,
2-azido-5-methyl- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6-methyl- 1 ,2- dihydronaphthalen- 1 -ol, 2-azido-5-(trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-5-fluoro- 1 ,2-dihydronaphthalen- 1 -ol, 1 -azido-5-fluoro- 1 ,2- dihydronaphthalen-2-ol, 2-azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-6- bromo- 1 ,2-dihydronaphthalen- 1 -ol, 2-azido-8-bromo-5-chloro- 1 ,2- dihydronaphthalen- l-ol, 4-azido-3,4-dihydrodibenzo[b,d]furan-3-ol, l-azido-l,2- dihydrophenanthren-2-ol, 1 -azido- 1 ,2-dihydroanthracen-2-ol, 6-azidocyclohexa- 2,4-dien-l-ol, 6-azido-5-bromocyclohexa-2,4-dien-l-ol, 6-azido-5- chlorocyclohexa-2,4-dien- 1 -ol, 6-azido-2-methylcyclohexa-2,4-dien- 1 -ol, 6- azido-4-methylcyclohexa-2,4-dien- 1 -ol, 6-azido-2-methoxycyclohexa-2,4-dien- l-ol, 5-azido-4,5-dihydropyren-4-ol, l-hydroxy-l,2-dihydronaphthalen-2-yl formate, 1 -hydroxy- 1 ,2-dihydronaphthalene-2-carbonitrile, 1 -hydroxy- 1,2- dihydronaphthalen-2-yl nitrate, 2-(isocyanooxy)-l,2-dihydronaphthalen-l-ol, 2- thiocyanato- 1 ,2-dihydronaphthalen- 1 -ol, phenyl (E)-N-( 1 -hydroxy- 1 ,2- dihydronaphthalen-2-yl)methanimidothioate, and 5-chloro- 1 -hydroxy- 1 ,2- dihydronaphthalen-2-yl formate.
In further embodiments, the derivative may comprise a derivative of 5-azido-4,5-dihydropyren-4-ol.
In embodiments, the derivative of the aromatic epoxide derived compound may be (substantially) enantiomerically pure, having an enantiomeric excess (ee) selected from the range of 0.8-1, such as from the range of 0.9-1, especially from the range of 0.95-1. In embodiments, the aromatic epoxide derived compound may have an ee equal to 1, i.e., the aromatic epoxide derived compound may be enantiomerically pure.
BRIEF DESCRIPTION OF THE DRAWINGS
Embodiments of the invention will now be described, by way of example only, with reference to the accompanying schematic drawings in which corresponding reference symbols indicate corresponding parts, and in which:
Fig. 1 schematically depicts an embodiment of the production process according to the invention wherein naphthalene is the aromatic compound;
Fig. 2 schematically depicts an embodiment of the production process according to the invention, wherein the epoxidation stage and the ring opening stage are spatially separated; Fig. 3A-B depict experimental observations regarding the stability the aromatic epoxide produced in the epoxidation stage;
Fig. 4 depicts several aromatic epoxide derived compounds that were obtained through the production process as described herein;
Fig. 5 depicts several further aromatic epoxide derived compounds that may be obtained through the production process as described herein; and
Fig. 6 depicts several non-limiting aromatic epoxide derived compounds that may be obtained using herein described procedures.
The schematic drawings are not necessarily on scale.
DETAILED DESCRIPTION OF THE EMBODIMENTS
Fig. 1 schematically depicts an embodiment of the production process 10 according to the invention. The epoxidation stage 200 comprises reacting the aromatic compound 100 with the peroxide 210 resulting in the aromatic epoxide 1 10, wherein the aromatic compound 100 comprises an aromatic ring structure, wherein the oxidoreductase 220 catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase 220 is selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases. The ring-opening stage 300 comprises reacting the aromatic epoxide 110 and a nucleophile 310 resulting in the aromatic epoxide derived compound 120. The synthesis stage 400 comprises reacting the aromatic epoxide derived compound 120 with one or more reactants 410 resulting in the formation of a second aromatic epoxide derived compound l20b. In this embodiment, the aromatic compound 100 comprises naphthalene, the peroxide 210 comprises H2O2, the oxidoreductase 220 comprises an unspecific peroxygenase, especially the unspecific peroxygenase Apol of Agrocybe aegerita, the aromatic epoxide 110 comprises naphthalene oxide, the nucleophile 310 comprises azide, the aromatic epoxide derived compound 120 comprises (lR,2R)-l-azido-l,2-dihydronaphthalen-2-ol, the one or more reactants 410 comprise HCIO4, and the second aromatic epoxide derived compound l20b comprises l-azidonaphthalene. Hence, In this embodiment, wherein the peroxide 210 comprises hydrogen peroxide, hence, H2O may be produced as a by-product of the epoxidation reaction. In other embodiments, wherein the peroxide 210 does not comprise hydrogen peroxide but one or more other peroxides, one or more different by-products may be produced.
In embodiments, the epoxidation stage may comprise reacting the aromatic compound 100 and the peroxide 210 in the presence of a first solvent for the aromatic compound 100. In further embodiments, the first solvent may comprise an aqueous solvent. In alternative embodiments, the first solvent may comprise one or more of a nonpolar solvent, a polar aprotic solvent, or a supercritical solvent.
Fig. 1 further depicts the spontaneous NIH shift 500 converting the aromatic epoxide 110 into the aromatic alcohol 1 15. The NIH shift 500 is an undesired side reaction with respect to the invention and may be minimized through design of the first reaction mixture and/or the second reaction mixture as well as through minimizing the time between the epoxidation stage 200 and the ring-opening stage 300. For example, in embodiments, the epoxidation stage may comprise reacting the aromatic compound 100 and the peroxide 210 in the presence of a first solvent for the aromatic compound 100, wherein the first solvent is chosen such that the occurrence of the NIH shift 500 is minimized. As HiO * may catalyze the NIH shift, the first solvent may, for example, comprise one or more of a nonpolar solvent, a polar aprotic solvent or a supercritical solvent.
Fig. 2 schematically depicts an embodiment of the production process. The epoxidation stage 200 comprises supplying the aromatic compound 100 and the peroxide 210 to an enzyme reactor 250. The enzyme reactor 250 comprises a first reaction mixture 230. The enzyme reactor 250 further comprises a first inlet 260 configured to provide a component of the first reaction mixture 230, herein specifically the aromatic compound 100 via an aromatic compound inlet tubing 102 and the peroxide 210 via a peroxide inlet tubing 212. In embodiments, the first reaction mixture 230 may comprise the oxidoreductase 220. In further or alternative embodiments, the oxidoreductase 220 may be immobilized on a staicture in the enzyme reactor 250, /. e. , the enzyme reactor 250 may comprise immobilized oxidoreductase. In such embodiment, the aromatic compound 100 and the peroxide 110 may react in the enzyme reactor resulting in the aromatic epoxide 1 10. The enzyme reactor 250 may be configured to provide the aromatic epoxide 1 10 to the nucleophile reaction unit 350. In this embodiment, the enzyme reactor 250 is configured to provide the aromatic epoxide 1 10 to the nucleophile reaction unit 350 via an aromatic epoxide tubing 1 12. The ring opening stage 300 comprises reacting the aromatic epoxide 110 and the nucleophile 310 in the nucleophile reaction unit 350 resulting in the aromatic epoxide derived compound 120. The nucleophile reaction unit 350 may comprise a second reaction mixture 330. In this embodiment, the nucleophile reaction unit 350 is in fluid connection with an external recovery loop 370. Hence, contents of the nucleophile reaction unit 350 continuously or periodically pass through the external recovery loop. The external recovery loop 370 may be configured to return the aromatic epoxide 1 10 and the nucleophile 310 to the nucleophile reaction unit 350 and to remove the aromatic epoxide derived compound 120. In this embodiment, the external recovery loop 370 comprises an aromatic epoxide derived compound tubing 122 and a external recovery loop reactor 380. The aromatic epoxide derived compound tubing 122 is configured to provide a fluid contact between the nucleophile reaction unit 350 and the external recovery loop reactor 380. The external recovery loop reactor 380 may be configured to enable the in situ removal of the produced aromatic epoxide derived compound on a solid phase while simultaneously returning the nucleophile back to the nucleophile reaction unit. In alternative or further embodiments, the external recovery loop reactor 380 may comprise an outlet configured for the release of the aromatic epoxide derived compound. In the depicted embodiment, the epoxidation stage and the ring-opening stage are spatially separated. In an alternative embodiment, the epoxidation stage and the ring-opening stage may be temporally separated.
Hereinafter several non-limiting experimental procedures are provided which are each either an embodiment of at least part of the production process as described herein, or an analytical procedure to quantify an aromatic epoxide and/or an aromatic epoxide derived compound. It will be clear to a person skilled in the art that many modifications will be possible to these procedures while remaining in the scope of the present invention.
Procedure 1 : Enzymatic epoxidation reactions to prepare aromatic epoxides. 2 mM naphthalene, 2 mM H2O2 and 200 nM unspecific peroxygenase of Agrocybe aegerita were added into 1.0 mL NaPi pH 7 (with 20% MeCN). The mixture was slowly stirred for 2.5-15 min, and then the mixture was moved to an ice bath and kept stirring for 30 min. The above concentration of each component is the final concentration under the condition applied. The mixture was then extracted with DCM and dried over MgS04 at 0 °C. Finally, the solvent was evaporated at 0 °C and the product was purified by column using 10 % ethyl acetate in either pentane or heptane. For the extraction, diethyl ether, chloroform or ethyl acetate can also be used. The amount of co-solvent MeCN can vary from 0-70 % v/v in NaPi buffer. Other co-solvents such as methanol, acetone, ethanol, dimethyl sulfoxide are also applicable. The epoxidation may be performed at a temperature selected from the range of 0 - 45 °C. The pH may be selected from the range of 5.0 to 8.5. In alternative embodiments, other buffers may be used in the reactions such as a buffer selected from the group comprising sodium citrate, sodium acetate, Tris-H SCh, Bis-Tris, BES buffer and britton-robinson buffer, with the buffer concentration selected from the range of 10 to 500 mM.
Procedure 2: Quantification of naphthalene epoxide. A reaction mixture with 100-400 nM unspecific peroxygenase of Agrocybe aegerita , 2 mM naphthalene and 2 mM H2O2 in NaPi (pH 7.0 with 20% CH3CN) was firstly prepared, then 20 pL of this mixture was added and mixed quickly to a 1980 pL of NaPi (pH 7.0 with 20% CH3CN). The final concentration of naphthalene for UV assay was 0.02 mM. The absorbance at 266.5 nm (extinction coefficient 8850 mM^cnT1) was recorded and the corresponding naphthalene epoxide concentration is shown in Fig. 3a. Fig. 3a depicts the concentration of naphthalene epoxide C over time t in minutes with 100 nM unspecific peroxygenase (line Ai), with 200 nM unspecific peroxygenase (line A2), and with 400 nM unspecific peroxygenase (line A3).
Procedure 3 : Quantification of naphthalene epoxide. A reaction mixture with 200 nM unspecific peroxygenase of Agrocybe aegerita , 2 mM naphthalene and 1-4 mM H2O2 in NaPi (pH 7.0 with 20% CH3CN) was firstly prepared, then 20 pL of this mixture was added and mixed quickly to a 1980 pL of NaPi (pH 7.0 with 20% CH3CN. The absorbance of this mixture at 266.5 nm (extinction coefficient 8850 niNT'cm 1 ) was recorded and the corresponding naphthalene epoxide shown in Fig. 3b. Fig. 3b depicts the concentration of naphthalene epoxide C over time t in minutes with 1 mM H2O2 (line A4), with 2 mM H2O2 (line A5), and with 4 mM H2O2 (line A,·,). It is clear from Fig. 3a-b that naphthalene epoxide is present for several minutes under these conditions rather than that it immediately undergoes the NIH shift.
Procedure 4: Ring-opening reactions with nucleophiles. 2 mM naphthalene, 2 mM H2O2 and 200 11M unspecific peroxygenase of Agrocybe aegerita were added into 1.0 mL NaPi pH 7 (with 20% MeCN). The mixture was slowly stirred for 2.5-10 min, and then the nucleophiles (e.g. N3-, CN-) with a certain concentration (0.01 to 0.25 M) were added. In other embodiments, the mixture may be slowly stirred for more than 10 minutes, such as for 15 minutes, especially 25 minutes. The above concentration of each component is the final concentration under the condition applied. The mixture was then extracted with DCM and dried over MgS04. Finally, the solvent was evaporated at 30 °C and the aromatic epoxide derived compound was purified by column using 10-20 % ethyl acetate in pentane/heptane. Other co-solvents, buffer and reaction conditions such as described in procedure 1“Enzymatic epoxidation reactions to prepare aromatic epoxides” may also be used here. The concentration of the aromatic epoxide derived compound was quantified using high-performance liquid chromatography (HPLC) and is reported in the table below. The indicated conversion refers to the percentage of naphthalene converted to the aromatic epoxide derived compound according to the combination of procedures 1 and 4.
Figure imgf000031_0001
Figure imgf000032_0001
In embodiments, the nucleophile may comprise one or more of Ns , CN-, SCN-, OCN-, s2; ROH, R0 , C1-, Br-, I-, HCO2 , N02 , CH3CO2 , CH3COS , (CH3CH2)3N, (CH3CH2)3P, NHS, H2S, RNH2, RNHR\ R-SH, PhSH, PhSeH, or PhOH.
Hence, in a specific embodiment of the production process, the aromatic compound comprises naphthalene, the oxidoreductase comprises the Apol protein (unspecific peroxygenase) of Agrocybe aegerita, and the nucleophile comprises N3 .
Procedure 5: Elimination of H20 to aromatic azides. In a one-pot three-step manner, after the epoxidation and ring-opening of napthalene using nucleophiles (Procedure 4 “Ring-opening reactions with nucleophiles”), perchloric acid (0.5-3 M) was added to the reaction mixture and the reaction mixture was stirred for 5 hours. In alternative embodiments, trifluoroacetic acid (0.5-3 M) may be used instead of perchloric acid. The extraction and purification procedures are the same as mentioned in procedure 1“Enzymatic epoxidation reactions to prepare epoxides”. The concentration of the second aromatic epoxide derived compound was quantified using gas chromatography (GC) and is reported in the table below. The indicated conversion refers to the percentage of naphthalene converted to the second aromatic epoxide derived compound according to the combination of procedures 1,4 and 5.
Figure imgf000032_0002
Procedure 6: Reduction of aromatic azide to aromatic amine. The reaction was performed in a one-pot three-step manner. After the epoxidation and ring-opening reaction with nucleophiles, the pH of the solution was then adjusted to approx. 9 by using NaOH (5 M). An amount of 10 mol% Pd/C was added directly to the solution. N2 gas was bubbled through the reaction mixture for 10 min, the reaction vial was sealed, and a balloon of pure H2 was applied to initiate the reduction. After 6 hours, the second aromatic epoxide derived product was extracted with DCM. The organic phase was dried over IYlgSCT and the solvent DCM was slowly evaporated in a rotavap. The second aromatic epoxide derived product was purified by column using 10% ethyl acetate in pentane. The extraction and purification procedures are the same as above mentioned in procedure 1 “enzymatic epoxidation reactions to prepare aromatic epoxides”. A full conversion of aromatic azide to aromatic amine was observed using quantification via GC- MS.
Procedure 7: Reduction of azido alcohol to amino alcohols. The reaction was performed in a one-pot three-step manner in a preparative scale. In a 100 ml reaction scale, 2 mM of naphthalene, 2 mM of H2O2 and 200 nM of unspecific peroxygenase were applied. After the addition of NaN3, the reaction was continued for 4 hours. The pH of the solution was then adjusted to approx. 9 by using NaOH (5 M). An amount of 10 mol% Pd/C was added directly to the solution. N? gas was bubbled through the reaction mixture for 10 min, the reaction vial was sealed, and a balloon of pure H2 was applied to initiate the reduction. After 6 hours, the product was extracted with DCM. The organic phase was dried over MgS04 and the solvent DCM was slowly evaporated in a rotavap. The product was purified by column using 10% ethyl acetate in pentane. The extraction and purification procedures are the same as above mentioned in procedure 1 “enzymatic epoxidation reactions to prepare aromatic epoxides”. A full conversion of azido alcohol to amino alcohol was observed using quantification via NMR.
Procedure 8: Click chemistry. The reactions were performed in a two-pot three-step manner; however, in embodiments the reactions may also be performed in a sequential one-pot three-step manner. As to the reaction in two-pot three-step manner, the azido alcohol and alkyne (e.g. 1.5 eq. phenyl acetylene) were dissolved in H20 and tert-butyl alcohol (2: 1, v:v). 5mol % CuS04*5H20 and l0mol% sodium ascorbate were added. The reaction mixture was stirred for 8 hours at 30 °C. The product was extracted with DCM. The organic phase was dried over MgS04 and the solvent DCM was slowly evaporated in a rotavap. The extraction and purification procedures are the same as above mentioned in “Enzymatic epoxidation reactions to prepare aromatic epoxides”. A 41% conversion of azido alcohol was observed using quantification via 1H NMR using phenyl acetylene as alkyne. In a separate experiment, a 73% conversion of azido alcohol was observed using quantification via 1H NMR based on propargyl acetate as alkyne.
Aforementioned experimental procedures represent non-limiting embodiments for the epoxidation stage (procedure 1), for the ring-opening stage (procedure 4), and for the synthesis stage (procedures 5-8). It will be clear to one skilled in the art that the synthesis stage may comprise one or more of the aforementioned procedures and/or one or more other procedures not explicitly mentioned herein.
The aforementioned analytical procedures involving spectroscopy, HPLC, GC GC-MS, NMR, 1H NMR are commonly used analytical procedures and will be known to one skilled in the art.
Fig. 4 schematically depicts several aromatic epoxide derived compounds (P15-P33) that were obtained using procedures 1,4 with azide as nucleophile and varying aromatic compounds. The percentages indicate the conversion of the aromatic compound to the aromatic epoxide derived compound using the native unspecific peroxygenase from Agrocybe aegerita (the left percentage) or the “Solo-variant” of the unspecific peroxygenase (the right percentage). “ND” refers to not detennined, i.e., not tested. refers to no observed conversion.
Several of the aromatic epoxide derived compounds depicted in Fig. 4, were also obtained using procedures 1,4 with azide as nucleophile, and with the“Jed -I- variant” of the unspecific peroxygenase. The obtained conversions with the Jed-I-variant are: P19: 45%, P26: 19%, P27: 18%. The conversion percentage of the remaining aromatic epoxide derived compounds with the Jed-I-variant were not determined.
Fig. 4 schematically depicts: l-azido-l,2-dihydronaphthalen-2-ol P15, 2-azido-5-bromo-l,2-dihydronaphthalen-l-ol P16, 2-azido-5-methyl-l,2- dihydronaphthalen-l-ol P17, 2-azido-6-methyl-l,2-dihydronaphthalen-l-ol P18, 2-azido-5-(trifluorom ethyl)- 1 ,2-dihydronaphthalen- 1 -ol P 19, 2-azido-5-fluoro-
1.2- ihydronaphthalen-l-ol P20, l-azido-5-fluoro-l,2-dihydronaphthalen-2-ol
P21, 2-azido-5-chloro-l,2-dihydronaphthalen-l-ol P22, 2-azido-6-bromo-l,2- dihydronaphthalen- 1 -ol P23 , 2-azido-8-bromo-5-chloro- 1 ,2-dihydronaphthalen- l-ol P24, 4-azi do-3, 4-dihydrodibenzo[b,d]furan-3-ol P25, l-azido-l,2- dihydrophenanthren-2-ol P26, l-azido-l,2-dihydroanthracen-2-ol P27, 6- azidocyclohexa-2,4-dien-l-ol P28, 6-azido-5-bromocyclohexa-2,4-dien-l-ol P29, 6-azido-5-chlorocyclohexa-2,4-dien-l-ol P30, 6-azido-2-methylcyclohexa-2,4- dien-l-ol P31, 6-azido-4-methylcyclohexa-2,4-dien-l-ol P32, 6-azido-2- methoxycyclohexa-2,4-dien-l-ol P33, and 5-azido-4,5-dihydropyren-4-ol P34.
Fig. 5 schematically depicts several compounds that were obtained using procedures 1,4 with naphthalene or l-chloronapthalene as aromatic compound and varying nucleophiles. The percentages indicate the conversion of the aromatic compound to the aromatic epoxide derived compound using the native unspecific peroxygenase from Agrocybe aegerita. The nucleophiles and compounds are: HC02 to produce 1 -hydroxy- l,2-dihydronaphthalen-2-yl formate Ni, CN to produce 1 -hydroxy- l,2-dihydronaphthalene-2-carbonitrile N2, NO3 to produce 1 -hydroxy- l,2-dihydronaphthalen-2-yl nitrate N3, OCN to produce 2- (isocyanooxy)-l,2-dihydronaphthalen-l-ol N4, SCN to produce 2-thiocyanato-
1.2-dihydronaphthalen-l-ol N?, PhNCS to produce 2-(((phenyl-l3- sulfaneylidene)methylene)amino)-l,2-dihydronaphthalen-l-ol N6, HCO2- to produce 5-chloro-l-hydroxy-l,2-dihydronaphthalen-2-yl formate N7 (from 1- chl oronapthal ene) .
As depicted in Fig. 5, relatively good results were obtained with Ns , HCO2 , CN , NOs , OCN , SCN , PhNCS, and HCO2 as nucleophile. Hence, in embodiments, the nucleophile may comprise one or more of NT, HC02\ CN , NO:, , OCN , SCN-, PhNCS, and HCO2 .
Fig. 6 schematically depicts several non-limiting aromatic epoxide derived compounds that may be obtained using the aforementioned procedures. In embodiments, the depicted compounds may be the final product of the production process. In alternative embodiments, the depicted compounds may be subjected to one or more further reactions in the synthesis stage. Examples of the aromatic epoxide derived compounds include: (l S,6S)-6-azidocyclohexa-2,4-dien-l-ol Pl, (l S,6S)-6-aminocyclohexa-2,4-dien-l-ol P2, azidobenzene P3, (lR,6R)-6-azido- cyclohexa-2,4-dien-l-ol P4, (lR,6R)-6-aminocyclohexa-2,4-dien-l-ol P5, (lR,2R)-l-azido-l,2-dihydronaphthalen-2-ol P6, (lR,2R)-
1 -amino- l,2-dihydronaphthalen-2-ol P7, 4-azidonapthalene P8, (4S,2S)-
2-azido-5-bromo-l,2-dihydronaphthalen-l-ol P9, (l S,2S)-2-amino-5-bromo- l,2-dihydronaphthalen-l-ol P10, l-azido-5-bromonapthalene Pl l, (lR,2R)-l- azido-l,2-dihydroanthracen-2-ol P12, (3R,4S)-4-azido-3,4-dihydrodibenzo[b,d]- furan-3-ol P13, (TR,2R)-l-azido-l,2-dihydrophenanthren-2-ol P14, and one or more derivatives of one or more of the aforementioned aromatic epoxide derived compounds. In a derivative of an aforementioned aromatic epoxide derived compound one or more of the H groups may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF3, CFF, C2H5, NO2, CºN, and Ci+x¾+2xO. Especially, one or more of the H side groups of the aromatic ring structure may be independently replaced with a side group selected from the group comprising F, Cl, Br, I, CF:,, CH:,, C2H5, N02, CºN, and Ci J E x0.
For example, non-limiting embodiments of azidobenzene derivatives include l-azido-4-methylbenzene and l-azido-2-chloro-4- fluorobenzene.
The term“plurality” refers to two or more.
The terms“substantially” or“essentially” herein, and similar terms, will be understood by the person skilled in the art. The terms“substantially” or “essentially” may also include embodiments with“entirely”,“completely”,“all”, etc. Hence, in embodiments the adjective substantially or essentially may also be removed. Where applicable, the term“substantially” or the term“essentially” may also relate to 90% or higher, such as 95% or higher, especially 99% or higher, even more especially 99.5% or higher, including 100%.
The term“comprise” includes also embodiments wherein the term “comprises” means“consists of’.
The term“and/or” especially relates to one or more of the items mentioned before and after“and/or”. For instance, a phrase“item 1 and/or item 2” and similar phrases may relate to one or more of item 1 and item 2. The term "comprising" may in an embodiment refer to "consisting of' but may in another embodiment also refer to "containing at least the defined species and optionally one or more other species".
Furthermore, the terms first, second, third and the like in the description and in the claims, are used for distinguishing between similar elements and not necessarily for describing a sequential or chronological order. It is to be understood that the terms so used are interchangeable under appropriate circumstances and that the embodiments of the invention described herein are capable of operation in other sequences than described or illustrated herein.
The devices, apparatus, or systems may herein amongst others be described during operation. As will be clear to the person skilled in the art, the invention is not limited to methods of operation, or devices, apparatus, or systems in operation.
It should be noted that the above-mentioned embodiments illustrate rather than limit the invention, and that those skilled in the art will be able to design many alternative embodiments without departing from the scope of the appended claims.
In the claims, any reference signs placed between parentheses shall not be construed as limiting the claim.
Use of the verb "to comprise" and its conjugations does not exclude the presence of elements or steps other than those stated in a claim. Unless the context clearly requires otherwise, throughout the description and the claims, the words“comprise”,“comprising”, and the like are to be construed in an inclusive sense as opposed to an exclusive or exhaustive sense; that is to say, in the sense of “including, but not limited to”. The article "a" or "an" preceding an element does not exclude the presence of a plurality of such elements.
The invention may be implemented by means of hardware comprising several distinct elements, and by means of a suitably programmed computer. In a device claim, or an apparatus claim, or a system claim, enumerating several means, several of these means may be embodied by one and the same item of hardware. The mere fact that certain measures are recited in mutually different dependent claims does not indicate that a combination of these measures cannot be used to advantage.
The invention also provides a control system that may control the device, apparatus, or system, or that may execute the herein described method or process. Yet further, the invention also provides a computer program product, when running on a computer which is functionally coupled to or comprised by the device, apparatus, or system, controls one or more controllable elements of such device, apparatus, or system.
The invention further applies to a device, apparatus, or system comprising one or more of the characterizing features described in the description and/or shown in the attached drawings. The invention further pertains to a method or process comprising one or more of the characterizing features described in the description and/or shown in the attached drawings.
The various aspects discussed in this patent can be combined in order to provide additional advantages. Further, the person skilled in the art will understand that embodiments can be combined, and that also more than two embodiments can be combined. Furthermore, some of the features can form the basis for one or more divisional applications.

Claims

CLAIMS:
1. A production process for the production of an aromatic epoxide derived compound, the production process comprising:
(i) an epoxidation stage comprising: reacting an aromatic compound and a peroxide in the presence of an oxidoreductase, resulting in an aromatic epoxide, wherein the aromatic compound comprises an aromatic ring staicture, wherein the oxidoreductase catalyzes epoxidation of the aromatic ring structure, and wherein the oxidoreductase is selected from the group consisting of oxygenases, peroxygenases, oxidases, and peroxidases;
(ii) a ring-opening stage comprising: reacting the aromatic epoxide and a nucleophile, resulting in the aromatic epoxide derived compound;
wherein the oxidoreductase comprises an unspecific peroxygenase.
2. The production process according to any one of the preceding claims, wherein the epoxidation stage comprises reacting the aromatic compound and the peroxide in the presence of a first solvent for the aromatic compound.
3. The production process according to claim 2, wherein the first solvent comprises an aqueous solvent.
4. The production process according to any one of the preceding claims, wherein the epoxidation stage comprises reacting the aromatic compound and the peroxide at a pH selected from the range of 5.0-8.5.
5. The production process according to claim 2, wherein the first solvent comprises one or more of a nonpolar solvent, a polar aprotic solvent, or a supercritical solvent.
6. The production process according to any one of the preceding claims, wherein the production process further comprises: (iii) a synthesis stage comprising: reacting the aromatic epoxide derived compound with one or more reactants, resulting in a second aromatic epoxide derived compound.
7. The production process according to any one of the preceding claims, wherein the nucleophile comprises one or more of N3 , CN , SCN-, OCN-, S2-, ROH, RO\ C1-, Br-, I-, HC02 , NOT, CTTCOf, CH3COS , (CH3CH2)3N, (CH3CH2)3P, NH3, H2S, RNH2, RNHR’, R-SH, PhSH, PhSeH, or PhOH.
8. The production process according to claim 7, wherein the nucleophile comprises one or more of N3 ·, HCO2 ·, CN , NO3 , OCN , SCN , PhNCS, and HCO2 .
9. The production process according to any one of the preceding claims, wherein the epoxidation stage and the ring-opening stage are temporally and/or spatially separated.
10. The production process according to claim 9, wherein the epoxidation stage comprises supplying the aromatic compound and the peroxide to an enzyme reactor comprising immobilized oxidoreductase, wherein the enzyme reactor is configured to provide the aromatic epoxide to a nucleophile reaction unit, and wherein the ring-opening stage comprises reacting the aromatic epoxide and the nucleophile in the nucleophile reaction unit.
11. The production process according to claim 10, wherein the nucleophile reaction unit is in fluid connection with an external recovery loop, wherein contents of the nucleophile reaction unit continuously or periodically pass through the external recovery loop, and wherein the external recovery loop is configured to return the aromatic epoxide and the nucleophile to the nucleophile reaction unit and to remove the aromatic epoxide derived compound.
12. The production process according to any one of claims 9-11, wherein the aromatic compound comprises naphthalene, wherein the oxidoreductase comprises the Apol protein of Agrocybe aegerita, and wherein the nucleophile comprises N:, .
13. The production process according to any one of the preceding claims, wherein the epoxidation stage comprises reacting the aromatic compound and the peroxide at a temperature selected from the range of 0-45 °C,
14. The production process according to any one of the preceding claims, wherein the aromatic ring structure consists of carbon atoms.
15. The production process according to any one of the preceding claims 1-13, wherein the aromatic ring structure comprises a heterocyclic ring structure.
16. The production process according to any one of the preceding claims 1-15, wherein the aromatic ring structure has one or more side groups independently selected from the group C¾, Cl, Br, I, OCH;,, CF3, F, CN, N02, NH2, CONIB, COCH:„ NHR, OCFTCFF, and OH.
17. An aromatic epoxide derived compound selected from the group consisting of l-azido-l,2-dihydronaphthalen-2-ol (P15), 2-azido-5-bromo-l,2- dihydronaphthalen- 1 -ol (P 16), 2-azido-5-methyl- 1 ,2-dihydronaphthalen- 1 -ol (P17), 2-azido-6-methyl-l,2-dihydronaphthalen-l-ol (P18), 2-azido-5- (trifluoromethyl)- 1 ,2-dihydronaphthalen- 1 -ol (P 19), 2-azido-5-fluoro- 1 ,2- ihydronaphthalen-l-ol (P20), l-azido-5-fluoro-l,2-dihydronaphthalen-2-ol (P21), 2-azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol (P22), 2-azido-6-bromo- 1 ,2- dihydronaphthalen- l-ol (P23), 2-azido-8-bromo-5-chloro-l,2-dihydronaphthalen- l-ol (P24), 4-azi do-3, 4-dihydrodibenzo[b,d]furan-3-ol (P25), l-azido-l,2- dihydrophenanthren-2-ol (P26), l-azido-l,2-dihydroanthracen-2-ol (P27), 6- azidocyclohexa-2,4-dien- 1 -ol (P28), 6-azido-5-bromocyclohexa-2,4-dien- 1 -ol (P29), 6-azido-5-chlorocyclohexa-2,4-dien-l-ol (P30), 6-azido-2- methylcyclohexa-2,4-dien-l-ol (P31), 6-azido-4-methylcyclohexa-2,4-dien-l-ol (P32), 6-azido-2-methoxycyclohexa-2,4-dien-l-ol (P33), 5-azido-4,5- dihydropyren-4-ol (P34), l-hydroxy-l,2-dihydronaphthalen-2-yl formate (Nl), 1- hydroxy- 1 ,2-dihydronaphthalene-2-carbonitrile (N2), 1 -hydroxy- 1 ,2- dihydronaphthalen-2-yl nitrate (N3), 2-(isocyanooxy)-l,2-dihydronaphthalen-l- ol (N4), 2-thiocyanato-l,2-dihydronaphthalen-l-ol (N5), phenyl (E)-N-(l- hydroxy- 1 ,2-dihydronaphthalen-2-yl)methanimidothioate (N6), 5-chloro- 1 - hydroxy- l,2-dihydronaphthalen-2-yl formate (N7), (l S,6S)-6-azidocyclohexa- 2,4-dien-l-ol (Pl), (lS,6S)-6-aminocyclohexa-2,4-dien-l-ol (P2), azidobenzene (P3), (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol (P4), (lR,6R)-6-aminocyclohexa- 2,4-dien-l-ol (P5), (lR,2R)-l-azido-l,2-dihydronaphthalen-2-ol (P6), (lR,2R)-
1 -amino- l,2-dihydronaphthalen-2-ol (P7),4-azidonapthalene (P8), (4 S,2S)-
2-azido-5-bromo-l,2-dihydronaphthalen-l-ol (P9), (l S,2S)-2-amino-5-bromo- l,2-dihydronaphthalen-l-ol (P10), l-azido-5-bromonapthalene (P 11), (lR,2R)-l- azido-l,2-dihydroanthracen-2-ol (P12), (3R,4S)-4-azido-3,4-dihydro- dibenzo[b,d]furan-3-ol (P13), and (lR,2R)-l-azido-l,2-dihydrophenanthren-2-ol (P 14).
18. The aromatic epoxide derived compound according to claim 17, wherein the aromatic epoxide derived compound is enantiomerically pure.
19. A derivative of an aromatic epoxide derived compound selected from the group consisting of l-azido-l,2-dihydronaphthalen-2-ol (P15), 2-azido- 5-bromo- 1 ,2-dihydronaphthalen- 1 -ol (P 16), 2-azido-5-methyl- 1,2- dihydronaphthalen- 1 -ol (P 17), 2-azido-6-methyl- 1 ,2-dihydronaphthalen- 1 -ol (P18), 2-azido-5-(trifluoromethyl)-l,2-dihydronaphthalen-l-ol (P19), 2-azido-5- fluoro-l,2- ihydronaphthalen-l-ol (P20), l-azido-5-fluoro-l,2- dihydronaphthalen-2-ol (P21 ), 2-azido-5-chloro- 1 ,2-dihydronaphthalen- 1 -ol (P22), 2-azido-6-bromo-l,2-dihydronaphthalen-l-ol (P23), 2-azido-8-bromo-5- chloro-l,2-dihydronaphthalen-l-ol (P24), 4-azi do-3, 4-dihydrodi benzo[b,d]furan-
3-ol (P25), l-azido-l,2-dihydrophenanthren-2-ol (P26), l-azido-l,2- dihydroanthracen-2-ol (P27), 6-azidocyclohexa-2,4-dien-l-ol (P28), 6-azido-5- bromocyclohexa-2,4-dien-l-ol (P29), 6-azido-5-chlorocyclohexa-2,4-dien-l-ol (P30), 6-azido-2-methylcyclohexa-2,4-dien-l-ol (P31), 6-azido-4- methylcyclohexa-2,4-dien- 1 -ol (P32), 6-azido-2-methoxycy clohexa-2,4-dien- 1 -ol (P33), 5-azido-4,5-dihydropyren-4-ol (P34), 1 -hydroxy- 1, 2-dihydronaphthal en-2- yl formate (Nl), l-hydroxy-l,2-dihydronaphthalene-2-carbonitrile (N2), 1- hydroxy-l,2-dihydronaphthalen-2-yl nitrate (N3), 2-(isocyanooxy)-l,2- dihydronaphthalen-l-ol (N4), 2-thiocyanato-l,2-dihydronaphthalen-l-ol (N5), phenyl (E)-N-( 1 -hydroxy- 1 , 2-dihydronaphthal en-2-yl)methanimidothioate (N6),
5-chloro-l -hydroxy- 1, 2-dihydronaphthal en-2-yl formate (N7), (l S,6S)-6- azidocyclohexa-2,4-dien-l-ol (Pl), (l S,6S)-6-aminocyclohexa-2,4-dien-l-ol
(P2), azidobenzene (P3), (lR,6R)-6-azidocyclohexa-2,4-dien-l-ol (P4), (lR,6R)-
6-aminocyclohexa-2,4-dien- 1 -ol (P5), ( lR,2R)- 1 -azido- 1 ,2-dihydronaphthalen-2- ol (P6), (lR,2R)l-amino-l,2-dihydronaphthalen-2-ol (P7),4-azidonapthalene (P8), (l S,2S)-2-azido-5-bromo-l,2-dihydronaphthalen-l-ol (P9), (l S,2S)-- 2-amino-5-bromol,2-dihydronaphthalen-l-ol (P10), l-azido-5-bromonapthalene
(Pl 1), (lR,2R)-l -azido- l,2-dihydroanthracen-2-ol (P12), (3R,4S)-4-azido-
3,4-dihydrodibenzo[b,d]furan-3-ol (P13), and (lR,2R)-l-azido-l,2-dihydro- phenanthren-2-ol (P14).
20. The derivative according to claim 19, wherein the derivative is enantiomerically pure.
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