WO2019109359A1 - Sgrna, lentivirus vector constructed therefrom, and application thereof - Google Patents

Sgrna, lentivirus vector constructed therefrom, and application thereof Download PDF

Info

Publication number
WO2019109359A1
WO2019109359A1 PCT/CN2017/115331 CN2017115331W WO2019109359A1 WO 2019109359 A1 WO2019109359 A1 WO 2019109359A1 CN 2017115331 W CN2017115331 W CN 2017115331W WO 2019109359 A1 WO2019109359 A1 WO 2019109359A1
Authority
WO
WIPO (PCT)
Prior art keywords
tumor
cells
sgrna
hif
lentiviral vector
Prior art date
Application number
PCT/CN2017/115331
Other languages
French (fr)
Chinese (zh)
Inventor
刘利平
鲍世韵
刘权
Original Assignee
深圳市人民医院
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 深圳市人民医院 filed Critical 深圳市人民医院
Priority to PCT/CN2017/115331 priority Critical patent/WO2019109359A1/en
Priority to CN201780001959.9A priority patent/CN108337893B/en
Publication of WO2019109359A1 publication Critical patent/WO2019109359A1/en

Links

Images

Classifications

    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • A61K48/0008Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy characterised by an aspect of the 'non-active' part of the composition delivered, e.g. wherein such 'non-active' part is not delivered simultaneously with the 'active' part of the composition
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • A61K48/005Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy characterised by an aspect of the 'active' part of the composition delivered, i.e. the nucleic acid delivered
    • A61K48/0058Nucleic acids adapted for tissue specific expression, e.g. having tissue specific promoters as part of a contruct
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705Receptors; Cell surface antigens; Cell surface determinants
    • C07K14/70567Nuclear receptors, e.g. retinoic acid receptor [RAR], RXR, nuclear orphan receptors
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/113Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
    • C12N15/86Viral vectors
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N7/00Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2310/00Structure or type of the nucleic acid
    • C12N2310/10Type of nucleic acid
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2740/00Reverse transcribing RNA viruses
    • C12N2740/00011Details
    • C12N2740/10011Retroviridae
    • C12N2740/15011Lentivirus, not HIV, e.g. FIV, SIV
    • C12N2740/15021Viruses as such, e.g. new isolates, mutants or their genomic sequences
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2740/00Reverse transcribing RNA viruses
    • C12N2740/00011Details
    • C12N2740/10011Retroviridae
    • C12N2740/15011Lentivirus, not HIV, e.g. FIV, SIV
    • C12N2740/15041Use of virus, viral particle or viral elements as a vector
    • C12N2740/15043Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2800/00Nucleic acids vectors
    • C12N2800/10Plasmid DNA
    • C12N2800/106Plasmid DNA for vertebrates
    • C12N2800/107Plasmid DNA for vertebrates for mammalian

Definitions

  • the invention relates to the field of biological gene therapy, in particular to a sgRNA and a lentiviral vector and application thereof, in particular to a lentivirus expressing CRISPR/Cas9 and targeting the knockdown HIF-1 ⁇ gene and its combined liver artery Embolization for clinical therapeutic applications in patients with human liver tumors.
  • HCC Hepatocellular carcinoma
  • TACE transarterial embolization
  • TAE is to inject mixed materials including chemotherapy drugs into the HCC tumor arteries, block the tumor nutrient supply, lead to tumor tissue ischemia, hypoxia and necrosis, etc., to achieve the purpose of inhibiting tumor growth.
  • HCC patients after TAE are prone to tumor recurrence, metastasis, and a worrying prognosis. Studies have shown that these adverse consequences are associated with tumor changes in hypoxic environments. This requires new methods or techniques to improve current TAE/TACE treatments, particularly to limit tumor angiogenesis and tumor metastasis under hypoxic conditions of HCC.
  • CRISPR/Cas9 editing technology is one of the most advanced and mature gene editing technologies.
  • the CRISPR/Cas9 protein is a class of endonucleases derived from bacteria or archaea for obtaining an immune response in vivo. It targets specific DNA sites and completes gene editing under the guidance of a short guide RNA (sgRNA).
  • sgRNA short guide RNA
  • CRISPR/Cas9 and sgRNA can be introduced and expressed in target cells by a tool vector such as lentivirus, and CRISPR/Cas9 targets the DNA site of interest under the guidance of sgRNA.
  • a tool vector such as lentivirus
  • CRISPR/Cas9 targets the DNA site of interest under the guidance of sgRNA.
  • the DNA double strand will be cleaved by the CRISPR/Cas9 protein, and part of the DNA sequence will be deleted and the nucleic acid coding sequence will be completely changed.
  • the target gene will undergo a frameshift mutation and cannot perform normal function.
  • CRISPR/Cas9 editing technology is a practical technique for the treatment of tumors caused by multiple gene mutations. Therefore, CRISPR/Cas9 gene editing technology can be used for biogene therapy in patients with HCC.
  • HIF-1 ⁇ is a hypoxia-inducible transcription factor that plays a role in the progression of HCC, angiogenesis, chemotherapy tolerance, and liver cancer stem cell development.
  • HIF-1 ⁇ activates hypoxia-related signaling pathways through its own hypoxia response element (HRE), up-regulates vascular endothelial growth factor (VEGF), thereby promoting tumor vascular endothelial cell growth. And new blood vessels.
  • HIF-1 ⁇ activates epithelial-mesenchymal transition (EMT) by upregulating MMP2 and MMP9 proteins, which is beneficial to tumor invasion and metastasis.
  • EMT epithelial-mesenchymal transition
  • MMP2 and MMP9 proteins which is beneficial to tumor invasion and metastasis.
  • HIF-1 ⁇ protein is highly expressed in HCC, which is closely related to the high metastasis of hepatic vein.
  • the MDR1 protein (multi-drug resistance protein) is also regulated by HIF-1 ⁇ protein, and its protein product P-gp can maintain low chemotherapy in tumor cells.
  • the drug concentration which makes HCC have anti-chemotherapeutic drugs. More studies have shown that HCC patients in this treatment have high expression of HIF-1 ⁇ protein in their serum and tumor tissues compared with patients who have not been treated with TAE/TACE. HIF-1 ⁇ is closely related to high recurrence and tumor metastasis in patients.
  • TAE/TACE surgery can effectively control the growth of HCC and prolong the life of patients.
  • HCC patients after TAE are prone to tumor recurrence and a worrying prognosis.
  • studies have shown that patients with tumor recurrence, metastasis, drug resistance and various poor prognosis have a significant positive correlation with HIF-1 ⁇ protein expressed in tumor tissues after TAE/TACE in HCC patients.
  • the present invention provides a sgRNA and a lentiviral vector and application thereof, and the HIF-1 ⁇ gene is knocked out from the gene level by advanced gene editing technology, thereby realizing the technical improvement of the TAE/TACE surgery. Significantly improve the quality of life and survival time of patients with HCC.
  • the invention provides a sgRNA having a nucleotide sequence as set forth in SEQ ID NO. 1-3 or a nucleotide sequence having at least 80% identity thereto.
  • the nucleotide sequence is as follows:
  • SEQ ID NO. 1 (sgRNA719): CCTCACACGCAAATAGCTGA;
  • SEQ ID NO. 2 TACTCATCCATGTGACCATG
  • SEQ ID NO. 3 (sgRNA721): GTTATGGTTCTCACAGATGA.
  • the sgRNA was designed and optimized by studying HIF-1 ⁇ , and it was found that the expression of CRISPR/Cas9 by the above sgRNA was used to efficiently knock out the HIF-1 ⁇ gene, and knockdown of HCC liver cancer cells by lentiviral targeting.
  • the HIF-1 ⁇ gene can effectively control the growth of tumor cells, including inhibiting tumor cell migration and cell invasion, cell cycle arrest in G2/M phase, and promoting tumor cell apoptosis. The effect is obvious and statistically significant.
  • the nucleotide sequence of the sgRNA is shown in SEQ ID NO. 3, and the inventors have verified that the three sgRNAs are capable of knocking out the HIF-1 ⁇ gene, but SEQ ID NO.
  • the nucleotide sequence shown, sgRNA721, has the highest targeting to the HIF-1 ⁇ gene and the highest knockout efficiency.
  • the invention provides a CRISP/Cas9 lentiviral vector comprising the nucleotide sequence of the sgRNA of the first aspect.
  • the vector may be an existing vector capable of constructing a lentiviral vector, and the sgRNA of the present application may be inserted into the vector to achieve the purpose of knocking out the HIF-1 ⁇ gene in the present application.
  • the skilled person can select the vector as needed, and is not particularly limited herein.
  • the present application selects a conventional pLenti-CAS vector.
  • the present invention provides a method for constructing a CRISP/Cas9 lentiviral vector according to the second aspect, comprising the steps of:
  • the present invention provides a recombinant lentivirus comprising a recombinant lentivirus comprising a CRISP/Cas9 lentiviral vector according to the second aspect and a packaging helper plasmid psPAX2, pMD2.G and PEImax reagent co-transfected with a mammalian cell .
  • the mammalian cell is a HEK293T cell.
  • the present invention provides a CRISP/Cas9 lentiviral vector according to the second aspect for use in knocking out the HIF-1 ⁇ gene.
  • the present invention provides a pharmaceutical composition comprising the lentiviral vector of the second aspect and/or the recombinant lentivirus of the four aspects.
  • the invention provides the lentiviral vector of the second aspect, the recombinant lentivirus of the fourth aspect or Use of the pharmaceutical composition according to the sixth aspect for the preparation of an antitumor drug.
  • the tumor is a liver tumor, preferably liver cancer.
  • the composition further comprises a pharmaceutically acceptable excipient, which is any one or a combination of at least two of an excipient, a diluent, a carrier, a flavoring agent, a binder, and a filler.
  • a pharmaceutically acceptable excipient which is any one or a combination of at least two of an excipient, a diluent, a carrier, a flavoring agent, a binder, and a filler.
  • the invention provides a lentiviral vector according to the second aspect, a recombinant lentivirus according to the fourth aspect, or a pharmaceutical composition according to the sixth aspect, for use in the treatment of a liver tumor.
  • the recombinant lentivirus and/or pharmaceutical composition is used in combination with any one or a combination of at least two of surgery, chemotherapy or radiation therapy.
  • the surgery is hepatic artery embolization (TAE) and/or transcatheter arterial chemoembolization (TACE).
  • TAE hepatic artery embolization
  • TACE transcatheter arterial chemoembolization
  • the HIF-1 ⁇ gene is knocked out from the gene level by advanced gene editing technology, and the quality technical improvement of the TAE/TACE operation is achieved, and the quality of life and survival time of the HCC patient are significantly improved.
  • the present invention has the following beneficial effects:
  • the CRISPR/Cas9 lentivirus of the present invention can efficiently knock out the HIF-1 ⁇ gene, and knock out the HIF-1 ⁇ gene in HCC hepatoma cells by lentiviral targeting, thereby achieving effective control of tumor cell growth, including inhibition. Tumor cell migration and cell invasion, cell cycle arrest in G2/M phase, and promotion of tumor cell apoptosis, etc., have obvious effects and significant statistical differences;
  • the present invention adopts the most efficient CRISPR/Cas9 gene editing tool, and the designed HIF-1 ⁇ gene sgRNA site has the knockout activity superior to other sites reported in previous studies, and the first joint TAE/TACE Surgery for HCC tumor therapy, this gene therapy combined with TAE/TACE is more effective than TAE/TACE in the treatment of HCC, and its clinical use potential is greater;
  • the present invention combines the CRISPR/Cas9 editing technology of HIF-1 ⁇ gene with TAE/TACE surgery, and can significantly inhibit the growth of mouse HCC and prolong the survival time of in situ HCC tumor-bearing mice, in order to achieve clinical Effective treatment and life extension of HCC patients provides a new treatment.
  • Figure 1 (A) shows the expression of HIF-1 ⁇ protein in normal liver tissues (Normal, N) and HCC tissues (Tumor, T) in 3 HCC tissues of 3 liver cancer patients by immunoblotting;
  • Figure 1 (B) is the immune group.
  • the expression of HIF-1 ⁇ protein in normal liver tissue and HCC hepatocarcinoma of HCC cancer in 1 liver cancer patient was observed.
  • Figure 1 (C) shows the immunohistochemical detection of HIF in normal liver tissue and HCC cancer tissue of 20 patients.
  • -1 ⁇ protein expression difference Statistical difference analysis: *, p ⁇ 0.05;
  • FIG. 2(A) is a schematic diagram of three sgRNAs and pLenti-CAS-sgRNA-egfp lentiviral expression vectors constructed in accordance with the present invention
  • FIG. 2(B) is a HIG-treated by DNA gel electrophoresis for detection of the T7E1 endonuclease kit.
  • Figure 2 (C) shows the expression of HIF-1 ⁇ in hypoxic conditions after different chronic diseases infected SMMC-7721 cells constructed by Western blotting;
  • Figure 2 (E) qPCR detection of vegf1 and mdr1 genes in LV-H721 lentivirus infection The expression of VEGF1 and MDR1 protein in SMMC7721 cells under normal culture conditions after LV-H721 lentivirus infection, Fig.
  • FIG. 2(F) shows the expression of VEGF1 and MDR1 protein in normal culture conditions of SMMC7721 cells after LV-H721 lentivirus infection. Actin is the internal reference gene;
  • Figure 2 (G) LV-H721 intratumoral injection of mouse HCC tissue, immunohistochemistry detection of HIF-1 ⁇ protein expression and knockout efficiency, statistical difference analysis: *, p ⁇ 0.05; **, p ⁇ 0.01; ***, p ⁇ 0.001;
  • Figure 4 (A) shows that knockdown of HIF-1 ⁇ inhibits proliferation of SMMC-7721 cells under hypoxic conditions
  • Figure 4 (B) shows knockdown of HIF-1 ⁇ in hypoxic conditions against SMMC-7721 cell cycle
  • Figure 4 (C) shows the effect of knockout of HIF-1 ⁇ on the G0/G1 phase of SMMC-7721 cells under hypoxic conditions
  • Figure 4 (D) 24 hours and 48 hours after infection, HIF- The effect of 1 ⁇ knockout on the apoptosis of SMMC-7721 cells under hypoxic conditions and the statistical difference between the treatment groups, statistical difference analysis: *, p ⁇ 0.05; **, p ⁇ 0.01; ***, P ⁇ 0.001;
  • Fig. 5(A) shows the relationship between in-situ tumor volume and time growth of mice treated in each experimental group by in vivo imaging technique
  • Figure 5(B) shows the in situ tumor on the 20th day of mice treated in each experimental group. Volume growth
  • Figure 5 (C) is the 20th day of treatment of mice in each experimental group, stripping the liver to observe the tumor growth in situ
  • Figure 5 (D) is the survival curve of HCC tumor-bearing mice treated with each experimental group .
  • mice were divided into 4 groups, 10 in each group, Ctrl group: orthotopic liver tumor and placebo The mice were treated with HAL group: orthotopic liver tumor and hepatic artery ligation HAL-treated mice group; HAL+LV-Ctrl group: orthotopic liver tumor, hepatic artery ligation HAL and control lentivirus-treated mice group; HAL+LV -H721 group: orthotopic liver tumor, hepatic artery ligation HAL, and lentiviral LV-H721 treated mice group against HIF-1 ⁇ knockout;
  • Figure 6 (A) The knockdown of HIF-1 ⁇ inhibits the angiogenesis of SMMC-7721 in situ HCC tumors, and the expression of CD31 is detected by immunohistochemistry.
  • Figure 6 (B) shows the immunohistochemical detection of CD31+ in tumor tissues. The cell area was statistically different between different treatment groups; Fig.
  • FIG. 6(C) shows TUNEL detection of HIF-1 ⁇ knockdown on SMMC-7721 established in situ HCC tumor apoptosis
  • Figure 6 (D) shows TUNEL detection of tumor
  • experimental mice were divided into 4 groups, each group was 4, Ctrl group: orthotopic liver tumor and placebo-treated mice group
  • HAL group orthotopic liver tumor and hepatic artery ligation HAL-treated mice group
  • HAL+LV-Ctrl group orthotopic liver tumor, liver artery ligation HAL and control lentivirus-treated mice
  • HAL+LV-H721 group orthotopic liver tumor, hepatic artery ligation HAL, and lentiviral LV-H721-treated mice group against HIF-1 ⁇ knockout.
  • the method for detecting expression of HIF1- ⁇ in HCC tumor tissue comprises the following steps:
  • Sample preparation 1) Surgical operation of hepatobiliary and pancreatic surgery in Shenzhen People's Hospital for tumor and adjacent tissues of HCC liver cancer patients, liquid nitrogen cryopreservation; 2) adding liquid nitrogen, rapid grinding, obtaining tumor and normal tissue powder, RIPA lysate Cleavage the sample; 3) Centrifuge at 12000 g/min for 4 minutes at 4 °C; 4) Transfer the supernatant to a new tube, determine the protein concentration using a protein quantification kit, and record, add 1/5 volume of 5 ⁇ to each sample.
  • Electrophoresis The electrophoresis time is generally 4 to 5 hours, the voltage is 40V, and 60V is also available. (In order to speed up, use 80V to condense the glue, run with 120-140V after separating the glue, the result is also good, the total time is about 2h). When the bromophenol blue is just run out, the electrophoresis can be terminated and the film can be transferred.
  • Transfer film Before the film is transferred, the PVDF film is wetted in methanol and then immersed in the transfer buffer. The gel is cut off, the gel is also bubbled in the transfer buffer, and the two pieces of thick filter paper are transferred. The membrane buffer is wet, and the transfer film sandwich layer is assembled. From bottom to top, the filter paper, PVDF membrane, gel, filter paper, and the power source are connected, and the constant flow 60 mA is transferred for 1 hour;
  • HIF1- ⁇ protein was highly expressed in HCC tumor tissue (T), while HIF1- ⁇ protein expressed in adjacent normal liver tissue (N) was low.
  • Permeation wax a mixture of xylene and paraffin wax is placed for 15 minutes, and then paraffin I and paraffin II permeation wax are placed for 20 to 30 minutes each time (the purpose of permeating wax is to remove the transparent agent such as xylene in the tissue, etc.
  • the paraffin is infiltrated into the interior of the tissue to be saturated for embedding.
  • the wax penetration time is longer depending on the waxing time of the tissue, which takes about 1-2 days.
  • the wax penetration should be carried out in the incubator and keep the temperature inside the box at 55-60. °C or so, pay attention to the temperature is not too high, so as not to be brittle. Placed in the incubator 0.5h);
  • Embedding The wax-transparent tissue was poured into a container together with the melted paraffin, and then immediately poured into cold water to immediately solidify into a wax block.
  • the melting point of paraffin wax used for embedding is between 50-60 ° C. When embedded, the paraffin wax with different melting point should be selected according to the materials of the tissue, the thickness of the slice, the climatic conditions, etc.
  • the melting point of paraffin wax commonly used in animal materials is 52-56 ° C. ;
  • Tissue sections were baked in a 60 ° C incubator for 2 hours; 2) Tissue sections were placed in xylene (I) for 10 min, replaced with xylene (II) and then soaked for 10 min; 3) Anhydrous ethanol (I) Soak for 5 min; 4) soak for 2 min in absolute ethanol (II); 5) soak for 2 min in 95% ethanol; 6) soak for 2 min in 70% ethanol; 7) soak for 2 min in single distilled water; 8) antigen repair: use 0.01M Trisodium citrate microwave method; 9) After standing for 20 minutes, the slice was returned to room temperature, soaked in three steamed water; 10) immersed in PBS for 5 min; 11) 3% H 2 O 2 deionized water, and allowed to stand at room temperature for 10 min.
  • HIF1- ⁇ protein was highly expressed in HCC tumor tissues (HCC), while HIF1- ⁇ protein expressed in normal liver tissues (Normal) was low.
  • HCC HCC tumor tissues
  • Normal normal liver tissues
  • Figure 1 (C) the expression of HIF1- ⁇ protein in HCC tissues and adjacent normal liver tissues of 20 HCC patients was statistically analyzed. The statistics showed that the difference was significant (*, p ⁇ 0.05).
  • the method for constructing the CRISPR/Cas9 lentivirus comprises the following steps:
  • the sgRNAs (including sgRNA719, sgRNA720 and sgRNA721) targeting the first exon sequence of HIF-1 ⁇ were designed by online software (www.crispr.mit.edu).
  • the nucleotide sequences of the three sgRNAs were designed as follows:
  • sgRNA719 (SEQ ID NO. 1): CCTCACACGCAAATAGCTGA;
  • sgRNA720 (SEQ ID NO. 2): TACTCATCCATGTGACCATG;
  • sgRNA721 (SEQ ID NO. 3): GTTATGGTTCTCACAGATGA;
  • the sgRNAs of interest were inserted into the plasmid pLenti-CAS-sgRNA-egfp (GeneChem, Shanghai) and identified by sequencing, and the successful pLenti-CAS-sg719/sg720/sg721-egfp was constructed as shown in Fig. 2(A);
  • sgRNA719 As shown in Figure 2(A), we designed three different sgRNAs for the first exon sequence of HIF-1 ⁇ , including sgRNA719, sgRNA720 and sgRNA721.
  • the basic structure of the plasmid pLenti-CAS-sgRNA-egfp is shown in the figure.
  • HEK 293T cells (ATCC, USA) were plated in a 15 cm-diameter cell dish. The cells were cultured in DMEM (GIBCO) using complete medium, including 10% FBS (GIBCO). 20 ⁇ g of pLenti-CAS-sg719/sg720/-sg721 plasmid, 15 ⁇ g of psPAX2, 10 ⁇ g of pMD2.G (Addgene, USA) and PEImax (Polysciences, USA) were thoroughly mixed and added to 0.5 ml of Opti MEM (GIBCO) medium, followed by On HEK293T cells, add a little medium to the cell layer;
  • HEK293T cells were used for titration of recombinant lentivirus.
  • the specific method was to quantify the gene expression level of gfp in cells by qPCR method, wherein ⁇ -actin gene was used as an internal reference gene.
  • the specific plan is:
  • Trizol extracted total RNA from cells, and RT-PCR identified the expression level of GFP mRNA in HEK293T cells after different concentrations of lentivirus infection (specification "Construction and characterization of a PDCD5 recombinant lentivirus vector and its Expression in tumor cells, DOI: 10.3892/or.2012.1756" "Detection of the recombinant lentiviral titer by real-time PCR” section in Methods and Materials.
  • ⁇ -actin-F (SEQ ID NO. 4): 5'-GTCCACCGCAAATGCTTCTA-3';
  • ⁇ -actin-R (SEQ ID NO. 5): 5'-TGCTGTCACCTTCACCGTTC-3';
  • GFP-F (SEQ ID NO. 6): 5'-TGCTTCAGCCGCTACCC-3';
  • GFP-R (SEQ ID NO. 7): 5'-AGTTCACCTTGATGCCGTTC-3';
  • virus titers of each recombinant virus were: 3 ⁇ 10 8 , 5 ⁇ 10 8 , 3 ⁇ 10 8 , 5 ⁇ 10 8 Tu/ml .
  • Example 3 Cnr CRISPR/Cas9-expressing lentivirus knockout of SMMC-7721 cells and HCC tumor HIF1- ⁇ gene
  • SMMC-7721 cells (ATCC, USA) were plated into 6-well plates, and 2 cell plates were plated together. The cells were cultured in complete medium DMEM (GIBCO), including 10% FBS (GIBCO). ;
  • the genomic DNA of the cells was extracted by QIAamp DNA Blood Kit (QIAGEN), quantified and determined by spectrophotometer, and then stored at -20 ° C, and the total RNA and total protein were extracted.
  • the T7E1 endonuclease mismatch detection kit is used to identify CRISPR/Cas9-mediated gene breaks and fragmental disorders. The procedure is described with reference to the specification. Specifically, the DNA fragment of the defective region is cloned by PCR and denatured at 200 ng and 95 °C. 5 min, then slowly cooled to 35 ° C -37 ° C conditions, the sample was further incubated with 5 U of T7E1 endonuclease in buffer (NEB), DNA electrophoresis and analysis results, the results shown in Figure 2 (B) ;
  • LV-H719/720/721 lentivirus mediates gene knockdown of HIF-1 ⁇ .
  • LV-H721 virus-mediated HIF-1 ⁇ knockout effect is good compared with the LV-H719/720 lentivirus.
  • the expression of protein HIF-1 ⁇ was significantly decreased; therefore, LV-H721 lentivirus will be used in the following examples and used in the study.
  • Trizol extracts total mRNA of SMMC-7721 cells from different lentivirus treatment groups
  • SMMC-7721 cells adherently grown after infection with lentiviruses such as LV-H721 for 48-h: add 1 ml of Trizol and repeatedly beat (1 ml of Trizol for 10 cm 2 area, and insufficient amount of Trizol may cause DNA contamination). Leave at room temperature for 5 min to ensure complete dissociation of the nucleoprotein complex;
  • VEGF1-F (SEQ ID NO. 8): 5'-TGCTCTACCTCCACCATGCCA-3';
  • VEGF 1-R (SEQ ID NO. 9): 5'-GAAGATGTCCACCAGGGTCTCG-3';
  • MDR1-F (SEQ ID NO. 10): 5'-TGATGCTGCTCAAGTTAAAGGG-3';
  • MDR1-R (SEQ ID NO. 11): 5'-TTGCCAACCATAGATGAAGGATAT-3';
  • ⁇ -actin-F (SEQ ID NO. 12): 5'-GTCCACCGCAAATGCTTCTA-3';
  • ⁇ -actin-R (SEQ ID NO. 13): 5'-TGCTGTCACCTTCACCGTTC-3;
  • the PCR procedure was: denaturation 94 ° C, 1 min; 40 cycles of PCR: denaturation 94 ° C, 10 s; annealing 58 ° C, 10 s; extension: 20 s; final extension: 10 min; 4 ° C continued;
  • Fig. 2(E) the LV-H721 virus-mediated HIF-1 ⁇ knockout effect was good, and the vegf and mdr1 genes under the control of HIF-1 ⁇ protein were down-regulated at the mRNA level, and their expression was significantly inhibited ( *, p ⁇ 0.001).
  • Fig. 2(F) The results of the experiment were as shown in Fig. 2(F). It can be seen from Fig. 2(F) that the expression of VEGF and MDR1 protein in the downstream target proteins was significantly decreased after LV-H721 virus-mediated HIF-1 ⁇ knockout.
  • LV-H721 lentivirus-infected mouse HCC tumor 1,5 ⁇ 10 7 SMMC-7721 cells were subcutaneously injected into nude mice. After 9 days, after the tumor of the mouse grew to 200 mm 3 , 5 ⁇ 10 7 LV-H721 lentiviruses were injected into the tumor, and LV-Ctrl lentivirus was injected into the tumor of another group as a control group.
  • the PBS group was a negative control group with 4 mice in each group.
  • HIF-1 ⁇ protein was significantly inhibited by LV-H721 lentivirus infection in mouse HCC tumors established by SMMC-7721 cells, and the difference was significant (*** , p ⁇ 0.001).
  • Example 4 Effect of HIF1- ⁇ knockout on migration and invasion of SMMC-7721 cells
  • SMMC-7721 cells were cultured in DMEM (GIBCO) using complete medium, including 10% FBS (GIBCO), and CoCl 2 was used to create cell hypoxic culture conditions;
  • SMMC-7721 cells were seeded in 6-well plates, and after 6-8 hours, they were infected with lentivirus (LV-Ctrl and LV-H721) or treated separately. After 8 hours of treatment, part 6 Orifice plates can be used for scratch testing. Some cells can be used in Transwell experiments. Some cells can be seeded into 96-well plates in exchange for new complete medium and 150 ⁇ M CoCl 2 working solution. After 48-h and 96-h, MTT was used to detect cell proliferation. At the same time, the treated cells were collected at 24-h and 48-h after infection, and subsequent operations such as cell cycle and apoptosis were detected.
  • the Transwell experiment used a filter membrane (Corning, Inc., Corning, NY) with a diameter of 6.5 mm and a pore size of 8 ⁇ m for observing the invasive ability of the cells.
  • Matrigel 50 ⁇ L DMEM was added to 10 ⁇ l, Corning, #356234) The gel was added to the filter, and a small layer was formed at 37 ° C for 2 h. After SMMC-7721 cells were infected with lentivirus for 48-h, 1 ⁇ 10 5 SMMC-7721 cells were plated into the upper layer (none).
  • Example 5 Effect of HIF1- ⁇ knockout on proliferation, cell cycle and apoptosis of SMMC-7721 cells
  • FIG. 4(A) shows that under hypoxic conditions, knockdown of HIF-1 ⁇ has a great restriction on the proliferation of SMMC-7721 liver tumor cells, and between groups after 48-h and 96-h infection. The statistical difference was significant (***, p ⁇ 0.001); at the same time, Figure 4 (B) knockdown of HIF-1 ⁇ caused SMMC-7721 cells to stay in the G2/M phase; Figure 4 (C) shows its G0/G1 phase The number of cells in the HIF-1 ⁇ knockdown was significantly reduced, and the statistical difference between the groups was significant (***, p ⁇ 0.001).
  • FIG. 4(A) shows that under hypoxic conditions, knockdown of HIF-1 ⁇ has a great restriction on the proliferation of SMMC-7721 liver tumor cells, and between groups after 48-h and 96-h infection. The statistical difference was significant (***, p ⁇ 0.001); at the same time, Figure 4 (B) knockdown of HIF-1 ⁇ caused SMMC-7721 cells to stay in the G
  • Example 6 Treatment of orthotopic tumors in mice by lentiviral LV-H721 in combination with HAL
  • mice BALB/c nu/nu mice, female, 6-8 weeks
  • Shanghai Shrek Limited Biosystems (license: SCXK(HU) 2007-0003, China), mice at SPF level) Animal room operation, and carry out experimental operations in accordance with the regulations of the Animal Experiment Management of Jinan University and the Animal Ethics Provisions of Guangzhou;
  • HCC tumor-bearing mice were divided into 4 groups, 8 in each group.
  • tumor cells were inoculated into mouse liver, 5 days later, each group Mouse arterial ligation experiments were performed. ;
  • mice On the 20th day after treatment with mouse HAL and lentivirus, the mice were sacrificed and the tumor tissues were taken out, and the expression of CD31 and apoptosis were detected. The results are shown in Fig. 5(A)-Fig. 5(D);
  • Figure 5 (A) shows that on the 20th day after treatment, the results of in vivo imaging showed that the HAL-treated group significantly inhibited the growth of HCC tumors, and the LV-H721+HAL experimental group had the best inhibition of HCC growth.
  • Fig. 5(B) shows the fluorescence of each group observed in the mouse in situ tumor in vivo growth on the 20th day after the treatment.
  • Fig. 5(C) shows the growth of mouse orthotopic tumors in the case of mouse exfoliation on the 20th day after the treatment.
  • Fig. 5(D) Survival curve of mice in each treatment group showed that LV-H721+HAL experimental group can significantly prolong the survival time of tumor-bearing mice, and the statistical difference is obvious (*, p ⁇ 0.05).
  • Permeation wax a mixture of xylene and paraffin wax is placed for 15 minutes, and then paraffin I and paraffin II permeation wax are placed for 20 to 30 minutes each time (the purpose of permeating wax is to remove the transparent agent such as xylene in the tissue, etc.
  • the paraffin is infiltrated into the interior of the tissue to be saturated for embedding.
  • the wax penetration time is longer depending on the waxing time of the tissue, which takes about 1-2 days.
  • the wax penetration should be carried out in the incubator and keep the temperature inside the box at 55-60. °C or so, pay attention to the temperature is not too high, so as not to be brittle. Placed in the incubator 0.5h);
  • Embedding The wax-transparent tissue was poured into a container together with the melted paraffin, and then immediately poured into cold water to immediately solidify into a wax block.
  • the melting point of paraffin wax used for embedding is between 50-60 ° C. When embedded, the paraffin wax with different melting point should be selected according to the materials of the tissue, the thickness of the slice, the climatic conditions, etc.
  • the melting point of paraffin wax commonly used in animal materials is 52-56 ° C. ;
  • Tissue sections were baked in a 60 ° C incubator for 2 hours; 2) Tissue sections were placed in xylene (I) for 10 min, replaced with xylene (II) and then soaked for 10 min; 3) Anhydrous ethanol (I) Soak for 5 min; 4) soak for 2 min in absolute ethanol (II); 5) soak for 2 min in 95% ethanol; 6) soak for 2 min in 70% ethanol; 7) soak for 2 min in single distilled water; 8) antigen repair: use 0.01M Trisodium citrate microwave method; 9) After standing for 20 minutes, the slice was returned to room temperature, soaked in three steamed water; 10) immersed in PBS for 5 min; 11) 3% H 2 O 2 deionized water, and allowed to stand at room temperature for 10 min.
  • Apoptosis cells were detected by 3'-hydroxyl end labeling of DNA cleavage sites in combination with histochemical methods (TUNEL). This method can accurately locate and detect early DNA breaks during apoptosis, using Promega kit (DeadEndTM Colorimetric) TUNEL DAB system):
  • the positive control group was firstly added with 100 ⁇ l of DNase I, and the reaction was carried out at 15-25 ° C for 10 min, followed by the same treatment group; 7) slide After drying, add 50 ⁇ l of TUNEL reaction mixture (negative control group only add 50 ⁇ l of fluorescein-labeled dUTP solution) to the specimen, and cover the slide or sealant in a dark humid chamber to react at 37 ° C ⁇ 1-h; 8) PBS Rinsing 3 times; 9) Apoptotic cells can be counted under fluorescent microscope with 1 drop of PBS (excitation wavelength is 450-500 nm, detection wavelength is 515-565 nm); 10) slide is dried and 50 ⁇ l of converter-POD is added to the specimen.
  • TUNEL Brown-yellow granules were positive in the nucleus, ie apoptotic cells. The number of apoptotic cells in 5 high-power fields was counted in each section, and the average value was the number of apoptotic cells in the tumor.
  • MVD microvessel density
  • Fig. 6(A) It can be seen from Fig. 6(A) that there is a new generation of tumor blood vessels after HAL treatment, and the expression of CD31 positive cells in the LV-H721+HAL experimental group is small, indicating that the angiogenesis in the tumor is significantly inhibited. .
  • the statistical results of Fig. 6(B) also showed that the area of CD31+ cells was significantly inhibited in the LV-H721+HAL experimental group (*, p ⁇ 0.05) compared with the other HAL-treated groups.
  • the TUNEL results in Fig. 6(C) also showed that the apoptosis effect was evident in the tumor tissues of HCC in the LV-H721+HAL experimental group.
  • Figure 6 (D) statistical results show that compared with other control groups, the apoptosis rate of tumor cells in the LV-H721 + HAL experimental group is very significant (*, p ⁇ 0.05).
  • the lentivirus used to target knockout of HIF-1 ⁇ can effectively knock out the HIF-1 ⁇ gene in SMMC-7721 liver tumor cells, and can effectively inhibit tumor cell growth, including inhibition of tumor cell migration and cells. Invasion, G2/M phase cell cycle arrest and promotion of tumor cell apoptosis, etc., the effect is obvious and statistically significant difference, not only that, LV-H721 and hepatic artery ligation HAL (hepatic artery ligation) can significantly inhibit mouse HCC Growth and prolongation of survival time in in situ HCC tumor-bearing mice. Therefore, the combination of gene therapy and TAE/TACE is more effective than TAE/TACE in the treatment of HCC, and its clinical use potential is greater.

Abstract

Provided are an sgRNA, a lentivirus vector constructed therefrom, and an application thereof. The nucleotide sequence of the sgRNA is as shown in SEQ ID NOs. 1-3. The present invention uses the currently most efficient gene-editing tool, CRISPR/Cas9, and the designed HIF-1α gene sgRNA locus has better gene knockout activity than other loci reported in previous studies. By combining with TAE/TACE surgery for the first time, the present invention can be used in HCC tumor treatment.

Description

一种sgRNA及其构建的慢病毒载体和应用SgRNA and its constructed lentiviral vector and application 技术领域Technical field
本发明涉及生物基因治疗领域,尤其涉及一种sgRNA及其构建的慢病毒载体和应用,具体涉及一种表达CRISPR/Cas9并靶向敲除HIF-1α基因的慢病毒的构建和其联合肝脏动脉栓塞术,用于人肝脏肿瘤患者的临床治疗应用。The invention relates to the field of biological gene therapy, in particular to a sgRNA and a lentiviral vector and application thereof, in particular to a lentivirus expressing CRISPR/Cas9 and targeting the knockdown HIF-1α gene and its combined liver artery Embolization for clinical therapeutic applications in patients with human liver tumors.
背景技术Background technique
作为世界第五大恶性肿瘤,肝细胞肝癌(Hepatocellular carcinoma,HCC)的致死率在所有肿瘤中排名前三,在近几十年来HCC的治疗形势并不乐观。HCC约占原发性肝癌比例的85%到90%,数据显示2012年全球新增肝癌患者782,500例,有745,500例患者死于肝癌。目前,临床用于肝癌治疗的技术包括手术切除、原位肝移植等。研究表明50%的肝癌患者由于发现过晚,并不适合使用这些传统方法。巴塞罗纳临床分析系统(Barcelona clinic liver cancer staging system,BCLC)指出对于HCC晚期B期并不能进行手术治疗的患者,其建议治疗使用肝脏动脉栓塞术(transarterial embolization,TAE),包括肝动脉化疗栓塞术(transarterial chemoembolization,TACE)。As the fifth largest malignant tumor in the world, the mortality rate of Hepatocellular carcinoma (HCC) ranks among the top three in all tumors. The treatment situation of HCC in recent decades is not optimistic. HCC accounts for about 85% to 90% of the proportion of primary liver cancer. The data show that in 2012, there were 782,500 new cases of liver cancer in the world, and 745,500 patients died of liver cancer. At present, clinical techniques for the treatment of liver cancer include surgical resection and orthotopic liver transplantation. Studies have shown that 50% of patients with liver cancer are not suitable for these traditional methods because they are found too late. The Barcelona clinical liver cancer staging system (BCLC) pointed out that for patients with advanced stage B of HCC who cannot undergo surgery, it is recommended to use transarterial embolization (TAE), including transcatheter arterial chemoembolization. Transarterial chemoembolization (TACE).
目前,研发新的治疗肝脏肿瘤的药物十分迫切。临床上,TAE是将包括化疗药物等在内的混合材料注入HCC肿瘤动脉内,阻断肿瘤营养供应,导致肿瘤组织局部缺血、缺氧及坏死等,达到抑制肿瘤生长的目的。研究表明TAE/TACE能够有效控制HCC的生长和延长肝癌患者的生命时间。然而,TAE术后的HCC患者容易出现肿瘤复发、转移和令人担忧的预后。研究表明这些不良后果与缺氧环境下的肿瘤改变有关。这就需要一些新的方法或技术来改进目前的TAE/TACE治疗手段,特别是限制HCC缺氧条件下的肿瘤血管新生成和肿瘤转移等。虽然,近年来以基因治疗和免疫治疗为代表的肿瘤治疗手段获得巨大突破。然而其高价的花费、冗长的时间消耗以及复杂的实施策略使其成为现有临床广泛普通患者使用方案的可能性有待提高。为此,利用现有新技术对现有临床可行的HCC治疗手段(包括TAE)进行的改进成为一种迫切需求和可供发展的选择。At present, the development of new drugs for the treatment of liver tumors is very urgent. Clinically, TAE is to inject mixed materials including chemotherapy drugs into the HCC tumor arteries, block the tumor nutrient supply, lead to tumor tissue ischemia, hypoxia and necrosis, etc., to achieve the purpose of inhibiting tumor growth. Studies have shown that TAE/TACE can effectively control the growth of HCC and prolong the life of patients with liver cancer. However, HCC patients after TAE are prone to tumor recurrence, metastasis, and a worrying prognosis. Studies have shown that these adverse consequences are associated with tumor changes in hypoxic environments. This requires new methods or techniques to improve current TAE/TACE treatments, particularly to limit tumor angiogenesis and tumor metastasis under hypoxic conditions of HCC. Although, in recent years, tumor therapy represented by gene therapy and immunotherapy has made a huge breakthrough. However, its high cost, lengthy time consumption, and complex implementation strategies have made it possible to increase the use of existing clinically common patients. To this end, the use of existing new technologies to improve existing clinically feasible HCC treatments (including TAE) has become an urgent need and a development option.
近来,利用基因编辑技术对人基因组进行改造获得了很大进步,特别是在转化医学领域。CRISPR(clustered regularly interspaced short palindromic repeats)/Cas9编辑技术就是当前最前沿与成熟的基因编辑技术之一。具体来说,CRISPR/Cas9蛋白是一类来源于细菌或古细菌体内用于获得性免疫应答的核酸内切酶类。它能够在一个短的向导RNA(short guide RNA,sgRNA)指导下靶向特定DNA位点并完成基因编辑。在生物技术层面上,CRISPR/Cas9及sgRNA能够通过慢病毒等工具载体导入并表达在目的细胞内,CRISPR/Cas9在sgRNA的指导下靶向目的DNA位点。此刻,DNA双链将被CRISPR/Cas9蛋白切开,并缺失部分DNA序列并彻底改变核酸编码序列,目的基因将发生移码突变而不能行使正常功能。为此,CRISPR/Cas9编辑技术是一种可实用的技术并用于治疗多基因突变引起的肿瘤治疗中。因此,可运用CRISPR/Cas9基因编辑技术用于HCC患者的生物基因治疗。Recently, the use of gene editing technology to transform the human genome has made great progress, especially in the field of translational medicine. CRISPR (clustered regular interspaced short palindromic repeats)/Cas9 editing technology is one of the most advanced and mature gene editing technologies. In particular, the CRISPR/Cas9 protein is a class of endonucleases derived from bacteria or archaea for obtaining an immune response in vivo. It targets specific DNA sites and completes gene editing under the guidance of a short guide RNA (sgRNA). At the biotechnology level, CRISPR/Cas9 and sgRNA can be introduced and expressed in target cells by a tool vector such as lentivirus, and CRISPR/Cas9 targets the DNA site of interest under the guidance of sgRNA. At this moment, the DNA double strand will be cleaved by the CRISPR/Cas9 protein, and part of the DNA sequence will be deleted and the nucleic acid coding sequence will be completely changed. The target gene will undergo a frameshift mutation and cannot perform normal function. To this end, CRISPR/Cas9 editing technology is a practical technique for the treatment of tumors caused by multiple gene mutations. Therefore, CRISPR/Cas9 gene editing technology can be used for biogene therapy in patients with HCC.
HIF-1α是一个缺氧诱导相关的转录因子,它在HCC恶化,血管新生成,化疗耐受以及肝脏肿瘤干细胞发展等方面起着促进作用。研究表明HIF-1α通过其自身的缺氧应答相关元件(hypoxia response element,HRE)激活缺氧相关信号通路,上调血管内皮生长因子(vascular endothelial growth factor,VEGF),为此促进肿瘤血管内皮细胞生长和血管新生成。另外,HIF-1α通过上调MMP2及MMP9蛋白,激活肿瘤上皮细胞-间质细胞转化(epithelial mesenchymal transition,EMT),这有利于肿瘤的侵染和转移。之前的研究也表明HCC中高表达HIF-1α蛋白,它与肝静脉的高转移密切相关。MDR1蛋白(multi-drug resistance protein)也是受HIF-1α蛋白调控,其蛋白产物P-gp能够维持肿瘤细胞内低的化疗 药物浓度,这使得HCC具备抗化疗药物治疗的作用。更多研究表明,与未进行TAE/TACE治疗的病人相比,该治疗的HCC患者在其血清和肿瘤组织中高表达HIF-1α蛋白,HIF-1α与患者的高复发和肿瘤转移关系密切。HIF-1α is a hypoxia-inducible transcription factor that plays a role in the progression of HCC, angiogenesis, chemotherapy tolerance, and liver cancer stem cell development. Studies have shown that HIF-1α activates hypoxia-related signaling pathways through its own hypoxia response element (HRE), up-regulates vascular endothelial growth factor (VEGF), thereby promoting tumor vascular endothelial cell growth. And new blood vessels. In addition, HIF-1α activates epithelial-mesenchymal transition (EMT) by upregulating MMP2 and MMP9 proteins, which is beneficial to tumor invasion and metastasis. Previous studies have also shown that HIF-1α protein is highly expressed in HCC, which is closely related to the high metastasis of hepatic vein. The MDR1 protein (multi-drug resistance protein) is also regulated by HIF-1α protein, and its protein product P-gp can maintain low chemotherapy in tumor cells. The drug concentration, which makes HCC have anti-chemotherapeutic drugs. More studies have shown that HCC patients in this treatment have high expression of HIF-1α protein in their serum and tumor tissues compared with patients who have not been treated with TAE/TACE. HIF-1α is closely related to high recurrence and tumor metastasis in patients.
研究表明TAE/TACE手术能够有效控制HCC的生长和延长患者生命时间。然而,TAE术后的HCC患者容易出现肿瘤复发和令人担忧的预后。研究表明,患者出现肿瘤复发、转移、抗药性和各种不良预后与HCC患者TAE/TACE术后肿瘤组织中高表达的HIF-1α蛋白有显著正相关性。为此,针对HCC患者的TAE/TACE手术存在明显的治疗缺陷,这种术后长期的不良后果需要重视和解决。Studies have shown that TAE/TACE surgery can effectively control the growth of HCC and prolong the life of patients. However, HCC patients after TAE are prone to tumor recurrence and a worrying prognosis. Studies have shown that patients with tumor recurrence, metastasis, drug resistance and various poor prognosis have a significant positive correlation with HIF-1α protein expressed in tumor tissues after TAE/TACE in HCC patients. To this end, there are significant treatment deficiencies in TAE/TACE surgery for HCC patients, and this long-term adverse outcome needs to be addressed and resolved.
为此,抑制HIF-1α在TAE/TACE术后HCC患者中的高表达有望切断肿瘤复发和发展的有效方法,成为治疗HCC的一种可靠改进途径。Therefore, inhibition of high expression of HIF-1α in HCC patients after TAE/TACE is expected to cut off tumor recurrence and development, and it is a reliable and improved way to treat HCC.
发明内容Summary of the invention
针对现有技术的缺陷,本发明提供一种sgRNA及其构建的慢病毒载体和应用,通过先进的基因编辑技术从基因水平敲除HIF-1α基因,实现TAE/TACE手术的质的技术改进,显著提高HCC患者生存质量和生存时间。In view of the defects of the prior art, the present invention provides a sgRNA and a lentiviral vector and application thereof, and the HIF-1α gene is knocked out from the gene level by advanced gene editing technology, thereby realizing the technical improvement of the TAE/TACE surgery. Significantly improve the quality of life and survival time of patients with HCC.
为达此目的,本发明采用以下技术方案:To this end, the present invention employs the following technical solutions:
第一方面,本发明提供一种sgRNA,所述sgRNA的核苷酸序列如SEQ ID NO.1-3所示或与其就有至少80%同一性的核苷酸序列。In a first aspect, the invention provides a sgRNA having a nucleotide sequence as set forth in SEQ ID NO. 1-3 or a nucleotide sequence having at least 80% identity thereto.
所述核苷酸序列如下:The nucleotide sequence is as follows:
SEQ ID NO.1(sgRNA719):CCTCACACGCAAATAGCTGA;SEQ ID NO. 1 (sgRNA719): CCTCACACGCAAATAGCTGA;
SEQ ID NO.2(sgRNA720):TACTCATCCATGTGACCATG;SEQ ID NO. 2 (sgRNA720): TACTCATCCATGTGACCATG;
SEQ ID NO.3(sgRNA721):GTTATGGTTCTCACAGATGA。SEQ ID NO. 3 (sgRNA721): GTTATGGTTCTCACAGATGA.
本发明中,通过对HIF-1α进行研究,设计了sgRNA并进行了优化,发现采用上述sgRNA构建表达CRISPR/Cas9实现高效敲除HIF-1α基因,通过慢病毒靶向敲除HCC肝癌细胞中的HIF-1α基因,实现了对肿瘤细胞生长的有效控制,包括抑制肿瘤细胞迁移与细胞侵袭,G2/M期的细胞周期停滞以及促进肿瘤细胞凋亡等,效果明显并具备显著性统计差异。In the present invention, the sgRNA was designed and optimized by studying HIF-1α, and it was found that the expression of CRISPR/Cas9 by the above sgRNA was used to efficiently knock out the HIF-1α gene, and knockdown of HCC liver cancer cells by lentiviral targeting. The HIF-1α gene can effectively control the growth of tumor cells, including inhibiting tumor cell migration and cell invasion, cell cycle arrest in G2/M phase, and promoting tumor cell apoptosis. The effect is obvious and statistically significant.
根据本发明,所述sgRNA的核苷酸序列如SEQ ID NO.3所示,发明人通过验证这三个sgRNA,发现其都能够对HIF-1α基因实现敲除,但SEQ ID NO.3所示的核苷酸序列,即sgRNA721对HIF-1α基因的靶向性最高,敲除效率最高。According to the present invention, the nucleotide sequence of the sgRNA is shown in SEQ ID NO. 3, and the inventors have verified that the three sgRNAs are capable of knocking out the HIF-1α gene, but SEQ ID NO. The nucleotide sequence shown, sgRNA721, has the highest targeting to the HIF-1α gene and the highest knockout efficiency.
第二方面,本发明提供一种CRISP/Cas9慢病毒载体,所述慢病毒载体包含如第一方面所述的sgRNA的核苷酸序列。In a second aspect, the invention provides a CRISP/Cas9 lentiviral vector comprising the nucleotide sequence of the sgRNA of the first aspect.
本发明中,所述载体可以为能够构建慢病毒载体的现有载体都是可行的,只需要将本申请的sgRNA插入载体内,就可以实现本申请敲除HIF-1α基因的目的,本领域技术人员可以根据需要选择载体,在此不作特殊限定,本申请选用的是常规的pLenti-CAS载体。In the present invention, the vector may be an existing vector capable of constructing a lentiviral vector, and the sgRNA of the present application may be inserted into the vector to achieve the purpose of knocking out the HIF-1α gene in the present application. The skilled person can select the vector as needed, and is not particularly limited herein. The present application selects a conventional pLenti-CAS vector.
第三方面,本发明提供一种如第二方面所述的CRISP/Cas9慢病毒载体的构建方法,包括如下步骤:In a third aspect, the present invention provides a method for constructing a CRISP/Cas9 lentiviral vector according to the second aspect, comprising the steps of:
(1)根据HIF-1α第一个外显子序列设计sgRNAs;(1) designing sgRNAs according to the first exon sequence of HIF-1α;
(2)将得到的sgRNAs插入pLenti-CAS载体中,得到所述CRISP/cas9慢病毒载体。(2) The obtained sgRNAs were inserted into a pLenti-CAS vector to obtain the CRISP/cas9 lentiviral vector.
第四方面,本发明提供一种重组慢病毒,将包含如第二方面所述的CRISP/Cas9慢病毒载体与包装辅助质粒psPAX2、pMD2.G和PEImax试剂共转染哺乳细胞得到的重组慢病毒。In a fourth aspect, the present invention provides a recombinant lentivirus comprising a recombinant lentivirus comprising a CRISP/Cas9 lentiviral vector according to the second aspect and a packaging helper plasmid psPAX2, pMD2.G and PEImax reagent co-transfected with a mammalian cell .
根据本发明,所述哺乳细胞为HEK293T细胞。According to the invention, the mammalian cell is a HEK293T cell.
第五方面,本发明提供一种如第二方面所述的CRISP/Cas9慢病毒载体用于敲除HIF-1α基因。In a fifth aspect, the present invention provides a CRISP/Cas9 lentiviral vector according to the second aspect for use in knocking out the HIF-1α gene.
第六方面,本发明提供一种药物组合物,所述药物组合物包括如第二方面所述的慢病毒载体和/或如四方面所述的重组慢病毒。In a sixth aspect, the present invention provides a pharmaceutical composition comprising the lentiviral vector of the second aspect and/or the recombinant lentivirus of the four aspects.
第七方面,本发明提供如第二方面所述的慢病毒载体、如第四方面所述的重组慢病毒或 如第六方面所述的药物组合物在制备抗肿瘤药物中的应用。In a seventh aspect, the invention provides the lentiviral vector of the second aspect, the recombinant lentivirus of the fourth aspect or Use of the pharmaceutical composition according to the sixth aspect for the preparation of an antitumor drug.
优选地,所述肿瘤为肝脏肿瘤,优选为肝癌。Preferably, the tumor is a liver tumor, preferably liver cancer.
优选地,所述组合物还包括药学上接受的辅料,所述辅料为赋形剂、稀释剂、载体、调味剂、粘合剂和填充剂中的任意一种或至少两种的组合。Preferably, the composition further comprises a pharmaceutically acceptable excipient, which is any one or a combination of at least two of an excipient, a diluent, a carrier, a flavoring agent, a binder, and a filler.
第八方面,本发明提供如第二方面所述的慢病毒载体、如第四方面所述的重组慢病毒或如第六方面所述的药物组合物用于治疗肝脏肿瘤。In an eighth aspect, the invention provides a lentiviral vector according to the second aspect, a recombinant lentivirus according to the fourth aspect, or a pharmaceutical composition according to the sixth aspect, for use in the treatment of a liver tumor.
根据本发明,所述重组慢病毒和/或药物组合物与手术、化学药物治疗或放射治疗中的任意一种或至少两种的组合联合使用。According to the invention, the recombinant lentivirus and/or pharmaceutical composition is used in combination with any one or a combination of at least two of surgery, chemotherapy or radiation therapy.
根据本发明,所述手术为肝脏动脉栓塞术(TAE)和/或肝动脉化疗栓塞术(TACE)。According to the invention, the surgery is hepatic artery embolization (TAE) and/or transcatheter arterial chemoembolization (TACE).
本发明中,通过先进的基因编辑技术从基因水平敲除HIF-1α基因,实现TAE/TACE手术的质的技术改进,显著提高HCC患者生存质量和生存时间。In the present invention, the HIF-1α gene is knocked out from the gene level by advanced gene editing technology, and the quality technical improvement of the TAE/TACE operation is achieved, and the quality of life and survival time of the HCC patient are significantly improved.
与现有技术相比,本发明具有如下有益效果:Compared with the prior art, the present invention has the following beneficial effects:
(1)本发明的CRISPR/Cas9慢病毒可以实现高效敲除HIF-1α基因,通过慢病毒靶向敲除HCC肝癌细胞中的HIF-1α基因,实现了对肿瘤细胞生长的有效控制,包括抑制肿瘤细胞迁移与细胞侵袭,G2/M期的细胞周期停滞以及促进肿瘤细胞凋亡等,效果明显并具备显著性统计差异;(1) The CRISPR/Cas9 lentivirus of the present invention can efficiently knock out the HIF-1α gene, and knock out the HIF-1α gene in HCC hepatoma cells by lentiviral targeting, thereby achieving effective control of tumor cell growth, including inhibition. Tumor cell migration and cell invasion, cell cycle arrest in G2/M phase, and promotion of tumor cell apoptosis, etc., have obvious effects and significant statistical differences;
(2)本发明采用了目前最高效的CRISPR/Cas9基因编辑工具,所设计的HIF-1α基因sgRNA位点具有优于以往研究所报道的其他位点的基因敲除活性,首次联合TAE/TACE手术,用于HCC肿瘤治疗,这种基因治疗与TAE/TACE结合的方法较单纯使用TAE/TACE治疗HCC的效果更明显,其临床使用潜力更大;(2) The present invention adopts the most efficient CRISPR/Cas9 gene editing tool, and the designed HIF-1α gene sgRNA site has the knockout activity superior to other sites reported in previous studies, and the first joint TAE/TACE Surgery for HCC tumor therapy, this gene therapy combined with TAE/TACE is more effective than TAE/TACE in the treatment of HCC, and its clinical use potential is greater;
(3)本发明将针对HIF-1α基因的CRISPR/Cas9编辑技术与TAE/TACE手术的结合,能够显著抑制小鼠HCC生长和延长原位HCC荷瘤小鼠的生存时间,为实现临床上对HCC患者的有效治疗及生命延长提供了一种新的治疗方法。(3) The present invention combines the CRISPR/Cas9 editing technology of HIF-1α gene with TAE/TACE surgery, and can significantly inhibit the growth of mouse HCC and prolong the survival time of in situ HCC tumor-bearing mice, in order to achieve clinical Effective treatment and life extension of HCC patients provides a new treatment.
附图说明DRAWINGS
图1(A)为蛋白印记检测3位肝癌患者HCC癌旁正常肝脏组织(Normal,N)及HCC癌组织(Tumor,T)中HIF-1α蛋白的表达情况;图1(B)为免疫组化显示1位肝癌患者HCC癌旁正常肝脏组织及HCC肝癌组织中HIF-1α蛋白的表达情况;图1(C)为统计免疫组化检测20位患者癌旁正常肝脏组织及HCC癌组织中HIF-1α蛋白表达差异。统计差异性分析:*,p≤0.05;Figure 1 (A) shows the expression of HIF-1α protein in normal liver tissues (Normal, N) and HCC tissues (Tumor, T) in 3 HCC tissues of 3 liver cancer patients by immunoblotting; Figure 1 (B) is the immune group. The expression of HIF-1α protein in normal liver tissue and HCC hepatocarcinoma of HCC cancer in 1 liver cancer patient was observed. Figure 1 (C) shows the immunohistochemical detection of HIF in normal liver tissue and HCC cancer tissue of 20 patients. -1α protein expression difference. Statistical difference analysis: *, p ≤ 0.05;
图2(A)为本发明构建的3个sgRNA及pLenti-CAS-sgRNA-egfp慢病毒表达载体示意图;图2(B)为DNA凝胶电泳检测T7E1核酸内切酶试剂盒处理后的HIF-1α基因敲除情况;图2(C)为蛋白印记检测构建的不同慢病感染SMMC-7721细胞后在缺氧条件中HIF-1α的表达情况;图2(D)慢病毒感染SMMC-7721细胞后能表达GFP蛋白,MOI=2.5感染情况下,流式细胞仪检测慢病毒感染后GFP阳性表达的SMMC-7721细胞比例;图2(E)qPCR检测vegf1和mdr1基因在LV-H721慢病毒感染后的SMMC-7721细胞正常培养条件下mRNA水平上的表达情况;图2(F)为蛋白印记检测在LV-H721慢病毒感染后SMMC7721细胞正常培养条件下VEGF1和MDR1蛋白的表达情况,β-actin为内参基因;图2(G)LV-H721瘤内注入小鼠HCC组织后,免疫组化检测HIF-1α蛋白的表达情况及其敲除效率,统计差异性分析:*,p≤0.05;**,p≤0.01;***,p≤0.001;2(A) is a schematic diagram of three sgRNAs and pLenti-CAS-sgRNA-egfp lentiviral expression vectors constructed in accordance with the present invention; and FIG. 2(B) is a HIG-treated by DNA gel electrophoresis for detection of the T7E1 endonuclease kit. 1α gene knockout; Figure 2 (C) shows the expression of HIF-1α in hypoxic conditions after different chronic diseases infected SMMC-7721 cells constructed by Western blotting; Figure 2 (D) Lentivirus infection SMMC-7721 cells After expressing GFP protein, MOI=2.5 infection, flow cytometry to detect the proportion of SMMC-7721 cells positively expressed by lentivirus infection; Figure 2 (E) qPCR detection of vegf1 and mdr1 genes in LV-H721 lentivirus infection The expression of VEGF1 and MDR1 protein in SMMC7721 cells under normal culture conditions after LV-H721 lentivirus infection, Fig. 2(F) shows the expression of VEGF1 and MDR1 protein in normal culture conditions of SMMC7721 cells after LV-H721 lentivirus infection. Actin is the internal reference gene; Figure 2 (G) LV-H721 intratumoral injection of mouse HCC tissue, immunohistochemistry detection of HIF-1α protein expression and knockout efficiency, statistical difference analysis: *, p ≤ 0.05; **, p ≤ 0.01; ***, p ≤ 0.001;
图3(A)Transwell实验检测HIF-1α敲除对SMMC7721细胞侵袭能力的影响,细胞多 少显示其穿越尼龙膜的能力强弱,MOI=2.5的情况下,LV-Ctrl及LV-H721慢病毒感染SMMC7721细胞后,CoCl2诱导的缺氧条件下培养细胞并检测其侵袭能力;图3(B)MOI=2.5的情况下,LV-Ctrl及LV-H721慢病毒感染SMMC7721细胞后,CoCl2诱导的缺氧条件下培养细胞并检测其细胞转移能力,统计差异性分析:*,p≤0.05;**,p≤0.01;***,p≤0.001;Figure 3 (A) Transwell assay to examine the effect of HIF-1α knockdown on the invasive ability of SMMC7721 cells. How much cells show their ability to cross the nylon membrane, MOI=2.5, LV-Ctrl and LV-H721 lentivirus infection after SMMC7721 cells, under hypoxic conditions CoCl 2 induced cells are cultured and tested for invasive ability; in the case of FIG. 3 (B) MOI = 2.5, the LV-Ctrl and the LV-H721 cells were infected with lentivirus SMMC7721, CoCl 2 induced The cells were cultured under hypoxic conditions and tested for cell transfer ability. Statistical difference analysis: *, p ≤ 0.05; **, p ≤ 0.01; ***, p ≤ 0.001;
图4(A)为HIF-1α的敲除在缺氧条件下抑制SMMC-7721细胞的增殖;图4(B)为HIF-1α的敲除在缺氧条件下对SMMC-7721细胞周期各期的影响;图4(C)为统计HIF-1α的敲除在缺氧条件下对SMMC-7721的细胞G0/G1期的影响情况;图4(D)感染24小时及48小时后,HIF-1α的敲除对SMMC-7721细胞在缺氧条件下细胞凋亡的影响及各处理组间的统计差异,统计差异性分析:*,p≤0.05;**,p≤0.01;***,p≤0.001;Figure 4 (A) shows that knockdown of HIF-1α inhibits proliferation of SMMC-7721 cells under hypoxic conditions; Figure 4 (B) shows knockdown of HIF-1α in hypoxic conditions against SMMC-7721 cell cycle Figure 4 (C) shows the effect of knockout of HIF-1α on the G0/G1 phase of SMMC-7721 cells under hypoxic conditions; Figure 4 (D) 24 hours and 48 hours after infection, HIF- The effect of 1α knockout on the apoptosis of SMMC-7721 cells under hypoxic conditions and the statistical difference between the treatment groups, statistical difference analysis: *, p ≤ 0.05; **, p ≤ 0.01; ***, P≤0.001;
图5(A)活体成像技术检测各实验组处理小鼠的原位肿瘤体积与时间的生长关系曲线;图5(B)为各实验组处理小鼠的第20天,活体成像观察原位肿瘤体积生长情况;图5(C)为各实验组处理小鼠的第20天,剥离肝脏观察原位肿瘤生长情况;图5(D)为各实验组处理HCC荷瘤小鼠与时间的生存曲线。统计差异性分析:*,p≤0.05;**,p≤0.01;***,p≤0.001;实验小鼠分为4组,每组为10只,Ctrl组:原位肝脏肿瘤及安慰剂处理小鼠组;HAL组:原位肝脏肿瘤及肝脏动脉结扎HAL处理小鼠组;HAL+LV-Ctrl组:原位肝脏肿瘤、肝脏动脉结扎HAL及对照慢病毒处理小鼠组;HAL+LV-H721组:原位肝脏肿瘤、肝脏动脉结扎HAL及针对HIF-1α敲除的慢病毒LV-H721处理小鼠组;Fig. 5(A) shows the relationship between in-situ tumor volume and time growth of mice treated in each experimental group by in vivo imaging technique; Figure 5(B) shows the in situ tumor on the 20th day of mice treated in each experimental group. Volume growth; Figure 5 (C) is the 20th day of treatment of mice in each experimental group, stripping the liver to observe the tumor growth in situ; Figure 5 (D) is the survival curve of HCC tumor-bearing mice treated with each experimental group . Statistical difference analysis: *, p ≤ 0.05; **, p ≤ 0.01; ***, p ≤ 0.001; experimental mice were divided into 4 groups, 10 in each group, Ctrl group: orthotopic liver tumor and placebo The mice were treated with HAL group: orthotopic liver tumor and hepatic artery ligation HAL-treated mice group; HAL+LV-Ctrl group: orthotopic liver tumor, hepatic artery ligation HAL and control lentivirus-treated mice group; HAL+LV -H721 group: orthotopic liver tumor, hepatic artery ligation HAL, and lentiviral LV-H721 treated mice group against HIF-1α knockout;
图6(A)HIF-1α的敲除对SMMC-7721建立的原位HCC肿瘤的血管生长抑制作用,免疫组化检测CD31的表达情况;图6(B)为免疫组化检测肿瘤组织中CD31+细胞面积在不同处理组间的统计差异;图6(C)为TUNEL检测HIF-1α的敲除对SMMC-7721建立的原位HCC肿瘤的细胞凋亡情况;图6(D)为TUNEL检测肿瘤组织中凋亡细胞在各组间的统计差异,统计差异性分析:*,p≤0.05;**,p≤0.01;***,p≤0.001;实验小鼠分为4组,每组为4只,Ctrl组:原位肝脏肿瘤及安慰剂处理小鼠组;HAL组:原位肝脏肿瘤及肝脏动脉结扎HAL处理小鼠组;HAL+LV-Ctrl组:原位肝脏肿瘤、肝脏动脉结扎HAL及对照慢病毒处理小鼠组;HAL+LV-H721组:原位肝脏肿瘤、肝脏动脉结扎HAL及针对HIF-1α敲除的慢病毒LV-H721处理小鼠组。Figure 6 (A) The knockdown of HIF-1α inhibits the angiogenesis of SMMC-7721 in situ HCC tumors, and the expression of CD31 is detected by immunohistochemistry. Figure 6 (B) shows the immunohistochemical detection of CD31+ in tumor tissues. The cell area was statistically different between different treatment groups; Fig. 6(C) shows TUNEL detection of HIF-1α knockdown on SMMC-7721 established in situ HCC tumor apoptosis; Figure 6 (D) shows TUNEL detection of tumor Statistical differences in apoptotic cells between tissues, statistical difference analysis: *, p ≤ 0.05; **, p ≤ 0.01; ***, p ≤ 0.001; experimental mice were divided into 4 groups, each group was 4, Ctrl group: orthotopic liver tumor and placebo-treated mice group; HAL group: orthotopic liver tumor and hepatic artery ligation HAL-treated mice group; HAL+LV-Ctrl group: orthotopic liver tumor, liver artery ligation HAL and control lentivirus-treated mice; HAL+LV-H721 group: orthotopic liver tumor, hepatic artery ligation HAL, and lentiviral LV-H721-treated mice group against HIF-1α knockout.
具体实施方式Detailed ways
为更进一步阐述本发明所采取的技术手段及其效果,以下结合附图并通过具体实施方式来进一步说明本发明的技术方案,但本发明并非局限在实施例范围内。The technical solutions of the present invention will be further described with reference to the accompanying drawings and the embodiments of the present invention, but the present invention is not limited to the scope of the embodiments.
实施例1:检测HCC肿瘤组织中HIF1-α的表达情况Example 1: Detection of HIF1-α expression in HCC tumor tissues
所述检测HCC肿瘤组织中HIF1-α的表达方法,包括如下步骤: The method for detecting expression of HIF1-α in HCC tumor tissue comprises the following steps:
1、蛋白印记检测HCC肿瘤组织中HIF1-α的表达情况1. Detection of HIF1-α expression in HCC tumor tissues by protein imprinting
(1)样品制备:1)深圳市人民医院肝胆胰外科手术取HCC肝癌患者肿瘤及癌旁组织,液氮冻存;2)加入液氮,快速研磨,获得肿瘤及正常组织粉末,RIPA裂解液裂解样品;3)4℃12000g/min离心20分钟;4)将上清转移到新管,用蛋白定量试剂盒测定蛋白的浓度,并记录,向每个样内加入1/5体积的5×上样缓冲液,用枪混匀后于沸水浴煮沸5min;5)4℃最大速度离心10分钟;6)上清转移至新管并分装,保存于-80℃冰箱。(1) Sample preparation: 1) Surgical operation of hepatobiliary and pancreatic surgery in Shenzhen People's Hospital for tumor and adjacent tissues of HCC liver cancer patients, liquid nitrogen cryopreservation; 2) adding liquid nitrogen, rapid grinding, obtaining tumor and normal tissue powder, RIPA lysate Cleavage the sample; 3) Centrifuge at 12000 g/min for 4 minutes at 4 °C; 4) Transfer the supernatant to a new tube, determine the protein concentration using a protein quantification kit, and record, add 1/5 volume of 5× to each sample. Load the buffer, mix with a gun and boil in a boiling water bath for 5 min; 5) Centrifuge at a maximum speed of 4 ° C for 10 minutes; 6) Transfer the supernatant to a new tube and dispense, and store in a -80 ° C refrigerator.
(2)蛋白质印记(Western-blot)鉴定HIF1-α蛋白表达情况:(2) Western blotting (Western-blot) to identify HIF1-α protein expression:
1)清洗玻璃板:一只手扣紧玻璃板,另一只手蘸点洗衣粉轻轻擦洗。两面都擦洗过后用自来水冲,再用蒸馏水冲洗干净后立于筐里晾干;1) Clean the glass plate: fasten the glass plate with one hand and gently scrub the other hand with the washing powder. After scrubbing on both sides, rinse with tap water, rinse with distilled water and stand in the basket to dry;
2)灌胶与上样:玻璃板对齐后放入夹中卡紧,然后垂直卡在架子上准备灌胶,按配方配制10%分离胶,加入TEMED后立即摇匀即可灌胶,灌胶时,可用10ml枪吸取5ml胶沿玻璃放出,待胶面升到绿带中间线高度时即可,用异丙醇液封加速胶凝,室温放置30min,当观察到胶凝后,倒去异丙醇,用清水冲洗,并用吸水纸吸干净;2) Glue and load: After aligning the glass plates, put them into the clips and clamp them, then vertically clamp them on the shelf to prepare the glue, and formulate 10% separation glue according to the formula. Immediately after adding TEMED, you can fill the glue and fill the glue. When using a 10ml gun, take 5ml of glue and release it along the glass. When the rubber surface rises to the height of the middle line of the green belt, accelerate the gel with isopropyl alcohol liquid seal and leave it at room temperature for 30min. When the gelation is observed, it will be inverted. Propanol, rinse with water and blot with absorbent paper;
3)配4%的浓缩胶,加入TEMED后立即摇匀即可灌胶,将剩余空间灌满浓缩胶然后将梳子插入浓缩胶中,由于胶凝固时体积会收缩减小,从而使加样孔的上样体积减小,所以在浓缩胶凝固的过程中要经常在两边补胶,待到浓缩胶凝固后,两手分别捏住梳子的两边竖直向上轻轻将其拔出,用水冲洗一下浓缩胶,将其放入电泳槽中;3) With 4% concentrated glue, immediately add TEMED, shake it to fill the glue, fill the remaining space with the concentrated glue and then insert the comb into the concentrated glue. As the glue solidifies, the volume will shrink and shrink, thus making the sample hole The loading volume is reduced, so in the process of solidification of the concentrated glue, it is necessary to make glue on both sides. After the concentrated gel is solidified, the two sides of the comb are respectively pinched and pulled up vertically, and rinsed with water. Glue, put it into the electrophoresis tank;
4)取提取的蛋白样品上样,每电泳孔上样30μg,加足够的电泳液后开始准备上样,(电泳液至少要漫过内测的小玻璃板)用微量进样器贴壁吸取样品,将样品吸出不要吸进气泡,将加样器针头插至加样孔中缓慢加入样品(加样太快可使样品冲出加样孔,若有气泡也可能使样品溢出,加入下一个样品时,进样器需在外槽电泳缓冲液中洗涤数次,以免交叉污染);4) Take the extracted protein sample and load 30μg per electrophoresis well. Add enough electrophoresis solution and start to prepare for loading. (The electrophoresis solution should at least flow through the small glass plate measured inside.) Adhere with a micro-injector. Sample, take the sample out, do not suck in the bubble, insert the sampler needle into the sample hole and slowly add the sample (the sample is too fast to make the sample out of the sample hole, if there is a bubble, the sample may overflow, add the next one When the sample is sampled, the injector should be washed several times in the outer tank running buffer to avoid cross-contamination);
5)电泳:电泳时间一般4~5h,电压为40V较好,也可用60V。(为了加快速度,浓缩胶时用80V跑,到分离胶以后用120-140V跑,结果也不错,总时间2h左右)电泳至溴酚兰刚跑出即可终止电泳,进行转膜;5) Electrophoresis: The electrophoresis time is generally 4 to 5 hours, the voltage is 40V, and 60V is also available. (In order to speed up, use 80V to condense the glue, run with 120-140V after separating the glue, the result is also good, the total time is about 2h). When the bromophenol blue is just run out, the electrophoresis can be terminated and the film can be transferred.
6)转膜:转膜前将PVDF膜在甲醇里湿润然后浸于转膜缓冲液,切去凝胶的浓缩胶,将凝胶也泡于转膜缓冲液内,将两片厚滤纸用转膜缓冲液湿润,组装转膜夹心层,从下到上依次为滤纸,PVDF膜,凝胶,滤纸,接上电源,恒流60mA转膜1小时;6) Transfer film: Before the film is transferred, the PVDF film is wetted in methanol and then immersed in the transfer buffer. The gel is cut off, the gel is also bubbled in the transfer buffer, and the two pieces of thick filter paper are transferred. The membrane buffer is wet, and the transfer film sandwich layer is assembled. From bottom to top, the filter paper, PVDF membrane, gel, filter paper, and the power source are connected, and the constant flow 60 mA is transferred for 1 hour;
7)封闭:将膜用PBST洗涤后,将膜浸泡于用PBST配制的5%的脱脂奶粉的封闭液内,4℃封闭过夜;7) Blocking: After washing the membrane with PBST, the membrane was immersed in a blocking solution of 5% skim milk powder prepared with PBST, and blocked at 4 ° C overnight;
8)一抗杂交:将封闭好的膜用PBST洗涤干净后,将膜浸泡于用PBST配制的HIF1-α 和β-actin的抗体(anti-HIF1-α抗体,1∶1000,Proteintech,#20960-I-AP;anti-β-actin抗体,1∶3000,Thermo,#MA1-140)杂交液内室温轻摇杂交4℃过夜;8) Primary antibody hybridization: After the blocked membrane was washed with PBST, the membrane was immersed in HIF1-α prepared with PBST. And β-actin antibody (anti-HIF1-α antibody, 1:1000, Proteintech, #20960-I-AP; anti-β-actin antibody, 1:3000, Thermo, #MA1-140) Shake the hybrid at 4 ° C overnight;
9)洗膜:将经过一抗杂交的膜用PBST洗涤6次,每次4分钟,摇床上高速振摇洗涤;9) Washing the membrane: the membrane subjected to primary antibody hybridization was washed 6 times with PBST for 4 minutes each time, and shaken at high speed on a shaker;
10)二抗杂交:将洗涤好的膜浸泡于用封闭液配制的辣根过氧化物酶标记的抗兔IgG-HRP(1∶2000,Cell Signaling Technology,#7074)或者抗鼠IgG-HRP(1∶2000,Cell Signaling Technolog,#7076)的二抗杂交液内室温轻摇杂交1小时;10) Secondary antibody hybridization: The washed membrane was immersed in horseradish peroxidase-labeled anti-rabbit IgG-HRP (1:2000, Cell Signaling Technology, #7074) or anti-mouse IgG-HRP (closed with blocking solution). 1:2000, Cell Signaling Technolog, #7076) secondary hybridization solution was shaken for 1 hour at room temperature;
11)洗膜:将经过二抗杂交的膜用PBST洗涤6次,每次4分钟,摇床上高速振摇洗涤;11) Washing the membrane: the membrane subjected to secondary antibody hybridization was washed 6 times with PBST for 4 minutes each time, and shaken at high speed on a shaker;
12)显影:化学发光(ECL法),将试剂盒中溶液A和溶液B取0.5ml混合并加入PVDF膜并充分接触,1-2min后,蛋白显像仪(ThermoFisher,Rockford,IL,USA)显色并拍照,保存图片,结果如图1(A)所示。12) Development: Chemiluminescence (ECL method), mix 0.5 ml of solution A and solution B in the kit and add PVDF membrane and fully contact. After 1-2 min, the protein imager (ThermoFisher, Rockford, IL, USA) Color and take a picture, save the picture, the result is shown in Figure 1 (A).
从图1(A)可以看出,HCC肿瘤组织(T)中高表达HIF1-α蛋白,而癌旁正常肝脏组织(N)中表达的HIF1-α蛋白偏低。As can be seen from Fig. 1(A), HIF1-α protein was highly expressed in HCC tumor tissue (T), while HIF1-α protein expressed in adjacent normal liver tissue (N) was low.
2、免疫组化检测HCC肿瘤组织中HIF1-α的表达情况2. Immunohistochemical detection of HIF1-α expression in HCC tumor tissues
(1)取出上述手术后HCC肝脏肿瘤及癌旁正常组织;(1) taking out the above-mentioned HCC liver tumor and adjacent normal tissues after surgery;
(2)4%多聚甲醛固定肿瘤组织;(2) 4% paraformaldehyde fixed tumor tissue;
(3)洗涤:材料经固定后,组织中的固定液必须冲洗干净,因为残留在组织中的固定液,有的不利于染色,有的产生沉淀或结晶影响观察;(3) Washing: After the material is fixed, the fixing liquid in the tissue must be washed out, because the fixing liquid remaining in the tissue is not conducive to dyeing, and some precipitation or crystallization influence observation;
(4)脱水:30%、50%、70%、80%、90%各级乙醇溶液脱水各40min,放入95%、100%各两次,每次20min(各种材料经固定与洗涤后,组织中含有大量水分,由于水与石蜡不能互溶,所以必须将组织中的水分除去);(4) Dehydration: 30%, 50%, 70%, 80%, 90% ethanol solution of each stage is dehydrated for 40 minutes, placed in 95%, 100% twice each for 20 minutes (after fixing and washing various materials) , the tissue contains a lot of water, because water and paraffin can not be mutually soluble, so the water in the tissue must be removed);
(5)透明:100%酒精、二甲苯等量混合液15min,二甲苯0.5h(或至透明为止),须换一次二甲苯(由于乙醇与石蜡不相溶,而二甲苯既能溶于乙醇又能溶于石蜡,所以脱水后还要经过二甲苯以过渡,当组织中全部被二甲苯占有时,光线可以透过,组织呈现出不同程度的透明状态);(5) Transparent: 100% alcohol, xylene equal volume mixture for 15min, xylene 0.5h (or until transparent), xylene must be changed once (because ethanol is incompatible with paraffin, and xylene is soluble in ethanol) It is also soluble in paraffin, so it needs to pass through xylene to transfer after dehydration. When the whole part of the tissue is occupied by xylene, the light can pass through, and the tissue shows different degrees of transparency);
(6)透蜡:放入二甲苯和石蜡各半的混合液15min,再放入石蜡I、石蜡II透蜡各20~30min(透蜡的目的是除去组织中的透明剂如二甲苯等,使石蜡渗透到组织内部达到饱和程度以便包埋。透蜡时间根据组织的透蜡时间较长,约需1-2天,透蜡应在恒温箱内进行,并保持箱内温度在55-60℃左右,注意温度不要过高,以免组织发脆。置于恒温箱0.5h);(6) Permeation wax: a mixture of xylene and paraffin wax is placed for 15 minutes, and then paraffin I and paraffin II permeation wax are placed for 20 to 30 minutes each time (the purpose of permeating wax is to remove the transparent agent such as xylene in the tissue, etc. The paraffin is infiltrated into the interior of the tissue to be saturated for embedding. The wax penetration time is longer depending on the waxing time of the tissue, which takes about 1-2 days. The wax penetration should be carried out in the incubator and keep the temperature inside the box at 55-60. °C or so, pay attention to the temperature is not too high, so as not to be brittle. Placed in the incubator 0.5h);
(7)包埋:将经过透蜡的组织连同熔化的石蜡,一起倒入容器内,然后立即投入冷水中,使其立刻凝固成蜡块。用于包埋的石蜡的熔点在50-60℃之间,包埋时应根据组织材料、切片厚度、气候条件等因素,选择不同熔点的石蜡,一般动物材料常用的石蜡熔点为52-56℃;(7) Embedding: The wax-transparent tissue was poured into a container together with the melted paraffin, and then immediately poured into cold water to immediately solidify into a wax block. The melting point of paraffin wax used for embedding is between 50-60 ° C. When embedded, the paraffin wax with different melting point should be selected according to the materials of the tissue, the thickness of the slice, the climatic conditions, etc. The melting point of paraffin wax commonly used in animal materials is 52-56 ° C. ;
(8)切片、贴片;(8) slicing, patching;
(9)免疫组化制片与观察,本实验需要使用免疫组化DAB法检测试剂盒:(9) Immunohistochemical preparation and observation, this experiment requires the use of immunohistochemical DAB assay kit:
1)组织切片在60℃恒温箱中烘烤2小时;2)组织切片置于二甲苯(I)中浸泡10min,更换到二甲苯(II)后再浸泡10min;3)无水乙醇(I)中浸泡5min;4)无水乙醇(II)中浸泡2min;5)95%乙醇中浸泡2min;6)70%乙醇中浸泡2min;7)单蒸水中浸泡2min;8)抗原修复:用0.01M柠檬酸三钠微波法修复;9)静置20min使切片恢复至室温 后,三蒸水中浸泡冲洗;10)PBS洗浸泡5min;11)3%H2O2去离子水,室温静置10min,TBST洗2-3次各5min;12)滴加正常山羊血清封闭液,室温15min;13)甩去多余液体,加入HIF-1α抗体(1∶100,Proteintech,#20960-I-AP),4度过夜;14)TBST洗3次各3min;15)滴加辣根过氧化化物酶标记的二抗40-50μl,室温静置30min;TBST洗3次各3min;16)DAB显色,在显微镜下掌握染色程度;17)PBS或自来水冲洗10min;18)苏木精复染1min左右,1%盐酸酒精分化;19)自来水冲洗10-15min;20)脱水:95%酒精10秒两次,100%酒精10秒两次,二甲苯10秒两次;21)烘片封片;22)显微镜观察并扫描获得肝脏肿瘤及正常肝脏组织中HIF-1α蛋白的表达情况并统计细胞表达的统计差异,结果如图1(B)-图1(C)所示;1) Tissue sections were baked in a 60 ° C incubator for 2 hours; 2) Tissue sections were placed in xylene (I) for 10 min, replaced with xylene (II) and then soaked for 10 min; 3) Anhydrous ethanol (I) Soak for 5 min; 4) soak for 2 min in absolute ethanol (II); 5) soak for 2 min in 95% ethanol; 6) soak for 2 min in 70% ethanol; 7) soak for 2 min in single distilled water; 8) antigen repair: use 0.01M Trisodium citrate microwave method; 9) After standing for 20 minutes, the slice was returned to room temperature, soaked in three steamed water; 10) immersed in PBS for 5 min; 11) 3% H 2 O 2 deionized water, and allowed to stand at room temperature for 10 min. Wash TBST 2-3 times for 5 min each time; 12) Add normal goat serum blocking solution at room temperature for 15 min; 13) Remove excess liquid and add HIF-1α antibody (1:100, Proteintech, #20960-I-AP), 4 Overnight; 14) TBST was washed 3 times for 3 min each; 15) 40-50 μl of horseradish peroxidase-labeled secondary antibody was added dropwise, allowed to stand at room temperature for 30 min; TBST was washed 3 times for 3 min each; 16) DAB was developed in a microscope Understand the degree of dyeing; 17) PBS or tap water rinse for 10 min; 18) hematoxylin counterstaining for about 1 min, 1% hydrochloric acid alcohol differentiation; 19) tap water rinse for 10-15 min; 20) dehydration: 95% alcohol for 10 seconds twice, 100 % Alcohol 10 seconds twice, xylene 10 seconds twice; 21) baking sheet; 22) microscopic observation and scanning to obtain the expression of HIF-1α protein in liver tumor and normal liver tissue and statistical differences in cell expression, results As shown in Figure 1 (B) - Figure 1 (C);
从图1(B)可以看出,免疫组化结果表明HCC肿瘤组织(HCC)中高表达HIF1-α蛋白,而癌旁正常肝脏组织(Normal)中表达的HIF1-α蛋白偏低。从图1(C)统计20个HCC病人HCC组织及癌旁正常肝脏组织中HIF1-α蛋白的表达情况,统计表明两者差异显著(*,p≤0.05)。As can be seen from Fig. 1(B), immunohistochemistry results indicated that HIF1-α protein was highly expressed in HCC tumor tissues (HCC), while HIF1-α protein expressed in normal liver tissues (Normal) was low. From Figure 1 (C), the expression of HIF1-α protein in HCC tissues and adjacent normal liver tissues of 20 HCC patients was statistically analyzed. The statistics showed that the difference was significant (*, p ≤ 0.05).
实施例2:针对HIF1-α基因敲除的CRISPR/Cas9慢病毒构建Example 2: Construction of CRISPR/Cas9 Lentiviral Against HIF1-α Knockout
所述CRISPR/Cas9慢病毒构建的方法,包括如下步骤:The method for constructing the CRISPR/Cas9 lentivirus comprises the following steps:
1、pLenti-CAS-sg719/sg720/sg721-egfp质粒的构建1. Construction of pLenti-CAS-sg719/sg720/sg721-egfp plasmid
通过在线软件(www.crispr.mit.edu)设计针对HIF-1α第一个外显子序列的目的sgRNAs(包括sgRNA719,sgRNA720和sgRNA721),设计的三个sgRNAs的核苷酸序列如下:The sgRNAs (including sgRNA719, sgRNA720 and sgRNA721) targeting the first exon sequence of HIF-1α were designed by online software (www.crispr.mit.edu). The nucleotide sequences of the three sgRNAs were designed as follows:
sgRNA719(SEQ ID NO.1):CCTCACACGCAAATAGCTGA;sgRNA719 (SEQ ID NO. 1): CCTCACACGCAAATAGCTGA;
sgRNA720(SEQ ID NO.2):TACTCATCCATGTGACCATG;sgRNA720 (SEQ ID NO. 2): TACTCATCCATGTGACCATG;
sgRNA721(SEQ ID NO.3):GTTATGGTTCTCACAGATGA;sgRNA721 (SEQ ID NO. 3): GTTATGGTTCTCACAGATGA;
将目的sgRNAs插入质粒pLenti-CAS-sgRNA-egfp(GeneChem,上海)中并测序鉴定,构建成功pLenti-CAS-sg719/sg720/sg721-egfp,如图2(A)所示;The sgRNAs of interest were inserted into the plasmid pLenti-CAS-sgRNA-egfp (GeneChem, Shanghai) and identified by sequencing, and the successful pLenti-CAS-sg719/sg720/sg721-egfp was constructed as shown in Fig. 2(A);
如图2(A)所示,我们针对HIF-1α第一个外显子序列设计了3个不同的sgRNAs,包括sgRNA719,sgRNA720和sgRNA721。图中显示了质粒pLenti-CAS-sgRNA-egfp基本结构。As shown in Figure 2(A), we designed three different sgRNAs for the first exon sequence of HIF-1α, including sgRNA719, sgRNA720 and sgRNA721. The basic structure of the plasmid pLenti-CAS-sgRNA-egfp is shown in the figure.
2、重组慢病毒包装及纯化2. Recombinant lentivirus packaging and purification
(1)将1×107个HEK 293T细胞(ATCC,美国)铺入15cm直径的细胞皿中。细胞使用完全培养基培养DMEM(GIBCO),包括10%FBS(GIBCO)。20μg pLenti-CAS-sg719/sg720/-sg721质粒,15μg psPAX2、10μg pMD2.G(Addgene,美国)和PEImax(Polysciences,美国)充分混合并加在0.5ml Opti MEM(GIBCO)培养基中,再加入HEK293T细胞上,加少许培养基没过细胞层;(1) 1 × 10 7 HEK 293T cells (ATCC, USA) were plated in a 15 cm-diameter cell dish. The cells were cultured in DMEM (GIBCO) using complete medium, including 10% FBS (GIBCO). 20 μg of pLenti-CAS-sg719/sg720/-sg721 plasmid, 15 μg of psPAX2, 10 μg of pMD2.G (Addgene, USA) and PEImax (Polysciences, USA) were thoroughly mixed and added to 0.5 ml of Opti MEM (GIBCO) medium, followed by On HEK293T cells, add a little medium to the cell layer;
(2)培养6小时培后,移去混合液并用完全培养基进行培养,48-h,96-h后收集上清培养液并使用0.45μm滤膜(Merck Millipore,美国)过滤; (2) After 6 hours of culture, the mixture was removed and cultured in complete medium. After 48-h, 96-h, the supernatant was collected and filtered using a 0.45 μm filter (Merck Millipore, USA);
(3)上清滤液在20,000rpm超高速离心机中离心2小时(4℃),去除上清,PBS小心收集底部LV-CAS病毒颗粒(LV-H719/720/721)并保存在-80℃冰箱;(3) The supernatant filtrate was centrifuged in a 20,000 rpm ultracentrifuge for 2 hours (4 ° C), the supernatant was removed, and the bottom LV-CAS virus particles (LV-H719/720/721) were carefully collected in PBS and stored at -80 ° C. refrigerator;
3、重组慢病毒的滴定3. Titration of recombinant lentivirus
(1)HEK293T细胞用于重组慢病毒的滴定,具体方法为qPCR法定量细胞内gfp的基因表达量,其中β-actin基因作为内参基因。具体方案为:(1) HEK293T cells were used for titration of recombinant lentivirus. The specific method was to quantify the gene expression level of gfp in cells by qPCR method, wherein β-actin gene was used as an internal reference gene. The specific plan is:
(1’)5×104HEK293T细胞铺入24孔板中;(1') 5×10 4 HEK293T cells were plated into 24-well plates;
(2’)过夜后,将10μl浓缩的慢病毒存储液与90μl的DMEM混合,将该混合液稀释10倍,依次类推稀释7个梯度。将不同浓度的慢病毒加入HEK293T细胞中,每个浓度重复三个梯度。(2') After overnight, 10 μl of the concentrated lentiviral stock solution was mixed with 90 μl of DMEM, the mixture was diluted 10-fold, and then 7 gradients were diluted by analogy. Different concentrations of lentivirus were added to HEK293T cells, and three gradients were repeated for each concentration.
(3’)48小时后,Trizol提取细胞的总RNA,RT-PCR鉴定不同浓度慢病毒感染后HEK293T细胞中GFP的mRNA表达水平(具体可参考文献“Construction and characterization of a PDCD5 recombinant lentivirus vector and its expression in tumor cells,DOI:10.3892/or.2012.1756”方法与材料中的“Detection of the recombinant lentiviral titer by real-time PCR”部分)。After (3') 48 hours, Trizol extracted total RNA from cells, and RT-PCR identified the expression level of GFP mRNA in HEK293T cells after different concentrations of lentivirus infection (specification "Construction and characterization of a PDCD5 recombinant lentivirus vector and its Expression in tumor cells, DOI: 10.3892/or.2012.1756" "Detection of the recombinant lentiviral titer by real-time PCR" section in Methods and Materials.
(4’)病毒滴定用引物为:(4') Primers for virus titration are:
β-actin-F(SEQ ID NO.4):5’-GTCCACCGCAAATGCTTCTA-3’;β-actin-F (SEQ ID NO. 4): 5'-GTCCACCGCAAATGCTTCTA-3';
β-actin-R(SEQ ID NO.5):5’-TGCTGTCACCTTCACCGTTC-3’;β-actin-R (SEQ ID NO. 5): 5'-TGCTGTCACCTTCACCGTTC-3';
GFP-F(SEQ ID NO.6):5′-TGCTTCAGCCGCTACCC-3′;GFP-F (SEQ ID NO. 6): 5'-TGCTTCAGCCGCTACCC-3';
GFP-R(SEQ ID NO.7):5′-AGTTCACCTTGATGCCGTTC-3′;GFP-R (SEQ ID NO. 7): 5'-AGTTCACCTTGATGCCGTTC-3';
结果表明各重组病毒:LV-Ctrl、LV-H719、LV-H720和LV-H721的病毒滴度分别为:3×108、5×108、3×108、5×108Tu/ml。The results showed that the virus titers of each recombinant virus: LV-Ctrl, LV-H719, LV-H720 and LV-H721 were: 3×10 8 , 5×10 8 , 3×10 8 , 5×10 8 Tu/ml .
实施例3:表达CRISPR/Cas9的慢病毒对SMMC-7721细胞及HCC肿瘤HIF1-α基因的敲除Example 3: Cnr CRISPR/Cas9-expressing lentivirus knockout of SMMC-7721 cells and HCC tumor HIF1-α gene
1、表达CRISPR/Cas9的慢病毒对SMMC-7721细胞的感染1. The infection of SMMC-7721 cells by the expression of CRISPR/Cas9 lentivirus
(1)将3×105个SMMC-7721细胞(ATCC,美国)铺入6孔板中,共铺2个细胞板,细胞使用完全培养基培养DMEM(GIBCO),包括10%FBS(GIBCO);(1) 3×10 5 SMMC-7721 cells (ATCC, USA) were plated into 6-well plates, and 2 cell plates were plated together. The cells were cultured in complete medium DMEM (GIBCO), including 10% FBS (GIBCO). ;
(2)培养8小时后,分别将LV-Ctrl、LV-H719、LV-H720和LV-H721加入上清培养液中,加入Polybrene(Sigma),每个样品3个重复;(2) After 8 hours of culture, LV-Ctrl, LV-H719, LV-H720 and LV-H721 were added to the supernatant culture solution, and Polybrene (Sigma) was added, and each sample was repeated 3 times;
(3)6-8小时后,去除上清培养基,加入新鲜培养基;在缺氧实验中,培养基中需要加入150μM CoCl2(Sigma)作为缺氧诱导剂;(3) After 6-8 hours, the supernatant medium was removed and fresh medium was added; in the hypoxia experiment, 150 μM CoCl 2 (Sigma) was added to the medium as an hypoxia inducing agent;
(4)48小时后,收集细胞并取部分流式(C6,BD Biosciences)检测GFP阳性细胞表 达率;(4) After 48 hours, collect the cells and take a partial flow (C6, BD Biosciences) to detect GFP positive cells. Rate of achievement;
(5)采用QIAamp DNA血液试剂盒(QIAGEN)提取细胞基因组DNA,经分光光度仪定量和测定浓度后,保存于-20℃,同时提取细胞总RNA及总蛋白保存;(5) The genomic DNA of the cells was extracted by QIAamp DNA Blood Kit (QIAGEN), quantified and determined by spectrophotometer, and then stored at -20 ° C, and the total RNA and total protein were extracted.
2、T7E1核酸内切酶对SMMC-7721细胞中HIF1-α基因敲除的鉴定2. Identification of HIF1-α gene knockout in SMMC-7721 cells by T7E1 endonuclease
T7E1核酸内切酶错配检测试剂盒用于鉴定CRISPR/Cas9介导的基因断裂和片段紊乱,其操作步骤参考说明书,具体来说,PCR克隆出缺陷区域的DNA片段,取200ng,95℃变性5min,然后缓慢降温至35℃-37℃条件下,样品再用5U量的T7E1核酸内切酶在缓冲液(NEB)中孵育处理,DNA电泳并分析结果,结果如图2(B)所示;The T7E1 endonuclease mismatch detection kit is used to identify CRISPR/Cas9-mediated gene breaks and fragmental disorders. The procedure is described with reference to the specification. Specifically, the DNA fragment of the defective region is cloned by PCR and denatured at 200 ng and 95 °C. 5 min, then slowly cooled to 35 ° C -37 ° C conditions, the sample was further incubated with 5 U of T7E1 endonuclease in buffer (NEB), DNA electrophoresis and analysis results, the results shown in Figure 2 (B) ;
从图2(B)可以看出,LV-H719/720/721慢病毒介导了HIF-1α的基因敲除。As can be seen from Figure 2 (B), LV-H719/720/721 lentivirus mediates gene knockdown of HIF-1α.
3、蛋白印记检测缺氧条件下LV-H719/720/721感染的SMMC-7721细胞中HIF1-α蛋白3. Western blot detection of HIF1-α protein in SMMC-7721 cells infected with LV-H719/720/721 under hypoxia 的表达情况Expression
(1)样品制备:1)LV-H719/720/721感染SMMC-7721细胞8小时后(MOI=2.5),培养基中需要加入150μM CoCl2(Sigma),作为缺氧诱导剂,72小时后收集细胞样品;2)加入300μl的RIPA于SMMC-7721细胞内,迅速用枪用力吹打混匀,放置于冰上裂解20min,期间每隔2-3min用力弹打管壁;3)4℃12000g/min离心20分钟;4)将上清转移到新管,用蛋白定量试剂盒测定蛋白的浓度,并记录,向每个样内加入1/4体积的5×上样缓冲液,用枪混匀后于沸水浴煮沸5min;5)4℃最大速度离心10分钟;6)上清转移至新管并分装,保存于-80℃冰箱。(1) Sample preparation: 1) After LV-H719/720/721 infection of SMMC-7721 cells for 8 hours (MOI=2.5), 150 μM CoCl 2 (Sigma) was added to the medium as hypoxia inducer, 72 hours later. Collect cell samples; 2) Add 300 μl of RIPA to SMMC-7721 cells, mix rapidly with a gun, and place on ice for 20 min. During the 2-3 min period, force the tube wall; 3) 4 °C 12000 g/ Centrifuge for 20 minutes at min; 4) Transfer the supernatant to a new tube, measure the protein concentration with a protein quantification kit, and record, add 1/4 volume of 5× loading buffer to each sample and mix with a gun. After boiling in a boiling water bath for 5 min; 5) Centrifuge at a maximum speed of 4 ° C for 10 minutes; 6) Transfer the supernatant to a new tube and dispense, and store in a -80 ° C refrigerator.
(2)Western-blot鉴定HIF1-α蛋白在不同处理组中的表达情况:具体步骤同实施例1。(2) Western-blot was used to identify the expression of HIF1-α protein in different treatment groups: the specific procedure was the same as in Example 1.
保存图片,实验结果如图2(C)所示,从图2(C)可以看出,与LV-H719/720慢病毒比较,LV-H721病毒介导的HIF-1α敲除效果良好,其蛋白HIF-1α表达明显下降;所以在下面的实施例中将使用LV-H721慢病毒并用于研究中。The picture was saved, and the experimental results are shown in Fig. 2(C). It can be seen from Fig. 2(C) that the LV-H721 virus-mediated HIF-1α knockout effect is good compared with the LV-H719/720 lentivirus. The expression of protein HIF-1α was significantly decreased; therefore, LV-H721 lentivirus will be used in the following examples and used in the study.
4、Trizol提取不同慢病毒处理组SMMC-7721细胞的总mRNA4. Trizol extracts total mRNA of SMMC-7721 cells from different lentivirus treatment groups
(1)准备试剂:氯仿,异丙醇,75%乙醇(DEPC水配),RNAase-free的水或0.5%SDS溶液,具体为加水到RNase-free的玻璃瓶,加DEPC到终浓度0.01%(V/V),过夜并高压,SDS也要用处理过的DEPC水配置;(1) Prepare reagents: chloroform, isopropanol, 75% ethanol (DEPC water), RNAase-free water or 0.5% SDS solution, specifically add water to RNase-free glass bottle, add DEPC to the final concentration of 0.01% (V/V), overnight and high pressure, SDS should also be treated with treated DEPC water;
(2)贴壁生长的SMMC-7721细胞在感染LV-H721等慢病毒感染48-h后:加1ml Trizol,反复吹打(1ml Trizol用于10cm2的面积,Trizol不够量可能导致DNA污染),室温放置5min,以保证核蛋白复合体完全解离;(2) SMMC-7721 cells adherently grown after infection with lentiviruses such as LV-H721 for 48-h: add 1 ml of Trizol and repeatedly beat (1 ml of Trizol for 10 cm 2 area, and insufficient amount of Trizol may cause DNA contamination). Leave at room temperature for 5 min to ensure complete dissociation of the nucleoprotein complex;
(3)每1ml Trizol加0.2ml氯仿,盖好管盖,颠倒混合15s,室温放置2-3min; (3) Add 1 ml of Trizol plus 0.2 ml of chloroform, cover the tube cover, mix for 15 s, and let stand for 2-3 min at room temperature;
(4)离心15min,4℃,所述离心的转速不超过12000g;(4) Centrifugation for 15 min, 4 ° C, the centrifugal speed does not exceed 12000 g;
(5)取上层水相到新管中,如分离DNA或蛋白可保留有机相,每1ml Trizol加0.5ml异丙醇,室温孵育10min;(5) taking the upper aqueous phase into a new tube, such as separating DNA or protein to retain the organic phase, adding 0.5 ml of isopropanol per 1 ml of Trizol, incubating for 10 min at room temperature;
(6)12000×15min,4℃,去上清,每1ml Trizol至少加1ml 75%乙醇,蜗旋混合,7500g×5min,4℃,去上清,短时空气干燥RNA沉淀,用RNase-free的水或0.5%SDS溶解;(6) 12000×15min, 4°C, remove the supernatant, add at least 1ml of 75% ethanol per 1ml of Trizol, mix with vortex, 7500g×5min, 4°C, remove the supernatant, short-time air drying RNA precipitation, use RNase-free Dissolved in water or 0.5% SDS;
(7)吹打数次,55-60℃孵育10min,-80℃保存;(7) Blow several times, incubate at 55-60 ° C for 10 min, and store at -80 ° C;
5、LV-H721感染的SMMC-7721细胞中vegf和mar1基因mRNA水平表达情况5. Expression of vegf and mar1 mRNA in SMMC-7721 cells infected with LV-H721
(1)向一无RNase的PCR管内加入2μl提取的总RNA,2μl M-MLV逆转录缓冲液,2μl的dNTP,1μl RNasin(Life Technology),补加9μl无RNase的超纯水至总体积为16μl,充分混匀;(1) Add 2 μl of extracted total RNA to an RNase-free PCR tube, 2 μl of M-MLV reverse transcription buffer, 2 μl of dNTP, 1 μl of RNasin (Life Technology), and add 9 μl of RNase-free ultrapure water to the total volume. 16μl, mix well;
(2)取两新的无RNase的PCR管,分别标记上RT+,RT-,将上述16μl混合液平分至此两管;(2) Take two new RNase-free PCR tubes, labeled with RT+, RT-, and divide the above 16 μl mixture into two tubes;
(3)每管加1μl HIV-1 gag的反向引物,加1μl的M-MLV反转录缓冲液(Life Technology)至RT+管中,加1μl的无RNase的超纯水至RT-管中,混匀;(3) Add 1 μl of reverse primer of HIV-1 gag to each tube, add 1 μl of M-MLV Reverse Transcription Buffer (Life Technology) to RT+ tube, add 1 μl of RNase-free ultrapure water to RT-tube. Mix well;
(4)42℃水域中逆转录1小时;(4) Reverse transcription for 1 hour in 42 °C water;
(5)93℃下3min失活逆转录酶;(5) Inactivation of reverse transcriptase at 93 ° C for 3 min;
(6)以逆转录的cDNA为模板,进行PCR;(6) performing PCR using reverse transcription cDNA as a template;
(7)PCR完成后,电泳检测;(7) After the completion of PCR, electrophoresis detection;
(8)经紫外分光光度仪定量和测定浓度后,保存于-20℃;(8) After quantitative determination and concentration by ultraviolet spectrophotometer, stored at -20 ° C;
(9)qPCR鉴定VEGF1和MDR1在mRNA水平的表达情况,引物为:(9) qPCR was used to identify the expression of VEGF1 and MDR1 at the mRNA level. The primers were:
VEGF1-F(SEQ ID NO.8):5’-TGCTCTACCTCCACCATGCCA-3’;VEGF1-F (SEQ ID NO. 8): 5'-TGCTCTACCTCCACCATGCCA-3';
VEGF 1-R(SEQ ID NO.9):5’-GAAGATGTCCACCAGGGTCTCG-3’;VEGF 1-R (SEQ ID NO. 9): 5'-GAAGATGTCCACCAGGGTCTCG-3';
MDR1-F(SEQ ID NO.10):5’-TGATGCTGCTCAAGTTAAAGGG-3’;MDR1-F (SEQ ID NO. 10): 5'-TGATGCTGCTCAAGTTAAAGGG-3';
MDR1-R(SEQ ID NO.11):5’-TTGCCAACCATAGATGAAGGATAT-3’;MDR1-R (SEQ ID NO. 11): 5'-TTGCCAACCATAGATGAAGGATAT-3';
β-actin-F(SEQ ID NO.12):5’-GTCCACCGCAAATGCTTCTA-3’;β-actin-F (SEQ ID NO. 12): 5'-GTCCACCGCAAATGCTTCTA-3';
β-actin-R(SEQ ID NO.13):5’-TGCTGTCACCTTCACCGTTC-3;β-actin-R (SEQ ID NO. 13): 5'-TGCTGTCACCTTCACCGTTC-3;
使用qPCR试剂盒(Thunderbird SYBR Green qPCR Mix,TOYOBO)和PCR仪(Roche Light Cycler 384,Roche),模板DNA:1∶10稀释使用;Using a qPCR kit (Thunderbird SYBR Green qPCR Mix, TOYOBO) and a PCR instrument (Roche Light Cycler 384, Roche), template DNA: 1:10 dilution;
PCR程序为:变性94℃,1min;40个循环PCR:变性94℃,10s;退火58℃,10s;延伸:20s;最后延伸:10min;4℃持续维持; The PCR procedure was: denaturation 94 ° C, 1 min; 40 cycles of PCR: denaturation 94 ° C, 10 s; annealing 58 ° C, 10 s; extension: 20 s; final extension: 10 min; 4 ° C continued;
数据分析使用2-ΔΔCT方法,结果如图2(D)和图2(E)所示。The data analysis was performed using the 2 -ΔΔCT method, and the results are shown in Fig. 2 (D) and Fig. 2 (E).
从图2(D)可以看到当MOI=2.5时,LV-H721慢病感染的SMMC-7721细胞表达GFP的比例达到93.6%。图2图(E)可以看出,LV-H721病毒介导的HIF-1α敲除效果良好,HIF-1α蛋白控制下的vegf及mdr1基因在mRNA水平都表达下调,其表达得到明显的抑制(*,p≤0.001)。It can be seen from Fig. 2(D) that when MOI=2.5, the proportion of GFP-expressing SMMC-7721 cells infected with LV-H721 chronic disease reached 93.6%. As shown in Fig. 2(E), the LV-H721 virus-mediated HIF-1α knockout effect was good, and the vegf and mdr1 genes under the control of HIF-1α protein were down-regulated at the mRNA level, and their expression was significantly inhibited ( *, p ≤ 0.001).
6、蛋白印记检测正常条件下LV-H721感染的SMMC-7721细胞中VEGF及MDR1蛋白6. Western blot detection of VEGF and MDR1 protein in SMMC-7721 cells infected with LV-H721 under normal conditions 的表达情况Expression
(1)样品制备:1)LV-H721感染SMMC-7721细胞8小时后(MOI=2.5),加入完全培养基,72小时后收集细胞样品;2)加入300μl的RIPA于SMMC-7721细胞内,迅速用枪用力吹打混匀,放置于冰上裂解20min,期间每隔2-3min用力弹打管壁;3)4℃12000g/min离心20分钟;4)将上清转移到新管,用蛋白定量试剂盒测定蛋白的浓度,并记录,向每个样内加入1/4体积的5×上样缓冲液,用枪混匀后于沸水浴煮沸5min;5)4℃最大速度离心10分钟;6)上清转移至新管并分装,保存于-80℃冰箱。(1) Sample preparation: 1) LV-H721 was infected with SMMC-7721 cells for 8 hours (MOI=2.5), complete medium was added, and cell samples were collected 72 hours later; 2) 300 μl of RIPA was added to SMMC-7721 cells, Quickly blow and mix with a gun, place on ice for 20 min, and force the wall every 2-3 min; 3) Centrifuge at 12000 g/min for 4 minutes at 4 °C; 4) Transfer the supernatant to a new tube with protein The concentration of the protein was determined by a quantitative kit, and it was recorded that 1/4 volume of 5× loading buffer was added to each sample, mixed with a gun and boiled in a boiling water bath for 5 min; 5) centrifuged at a maximum speed of 4 ° C for 10 minutes; 6) The supernatant was transferred to a new tube and dispensed and stored in a -80 ° C refrigerator.
(2)Western blot鉴定VEGF及MDR1蛋白在不同处理组中的表达情况,具体步骤同实施例1。(2) The expression of VEGF and MDR1 protein in different treatment groups was identified by Western blot. The specific steps were the same as in Example 1.
保存图片,实验结果如图2(F)所示,从图2(F)可以看出,LV-H721病毒介导的HIF-1α敲除后,其下游靶蛋白VEGF及MDR1蛋白表达明显下降。The results of the experiment were as shown in Fig. 2(F). It can be seen from Fig. 2(F) that the expression of VEGF and MDR1 protein in the downstream target proteins was significantly decreased after LV-H721 virus-mediated HIF-1α knockout.
7、免疫组化检测LV-H721感染小鼠HCC肿瘤后,其肿瘤中的HIF-1α蛋白表达情况7. Immunohistochemical detection of HIF-1α protein expression in tumors of mice infected with LV-H721 infected with HCC
(1)LV-H721慢病毒感染小鼠HCC肿瘤:1,5×107个SMMC-7721细胞皮下注入裸鼠皮下。9天后,小鼠肿瘤长大到200mm3后,瘤内注入5×107个LV-H721慢病毒,其中LV-Ctrl慢病毒作为对照组注入另一组小鼠瘤内。PBS组为阴性对照组,每组4只小鼠。(1) LV-H721 lentivirus-infected mouse HCC tumor: 1,5×10 7 SMMC-7721 cells were subcutaneously injected into nude mice. After 9 days, after the tumor of the mouse grew to 200 mm 3 , 5 × 10 7 LV-H721 lentiviruses were injected into the tumor, and LV-Ctrl lentivirus was injected into the tumor of another group as a control group. The PBS group was a negative control group with 4 mice in each group.
(2)慢病毒感染3天后,取出肿瘤组织,固定并进行免疫组化。方法参考实施例1:免疫组化检测HCC肿瘤组织中HIF1-α的表达情况。结果如图2(G)。(2) After 3 days of lentivirus infection, tumor tissues were taken out, fixed, and subjected to immunohistochemistry. Methods Reference Example 1: Immunohistochemistry was used to detect the expression of HIF1-α in HCC tumor tissues. The result is shown in Figure 2 (G).
如图2(G)所示,LV-H721慢病毒感染SMMC-7721细胞建立的小鼠HCC肿瘤后,其HIF-1α蛋白表达较其它两组肿瘤的表达受到明显抑制,差异显著(***,p≤0.001)。As shown in Figure 2(G), the expression of HIF-1α protein was significantly inhibited by LV-H721 lentivirus infection in mouse HCC tumors established by SMMC-7721 cells, and the difference was significant (*** , p ≤ 0.001).
实施例4:HIF1-α基因敲除对SMMC-7721细胞迁移和侵袭的影响Example 4: Effect of HIF1-α knockout on migration and invasion of SMMC-7721 cells
1、细胞培养及CoCl2诱导的缺氧条件培养1. Cell culture and CoCl 2 induced hypoxic condition culture
(1)SMMC-7721细胞使用完全培养基培养DMEM(GIBCO),包括10%FBS(GIBCO)培养,使用CoCl2来创造细胞缺氧培养条件;(1) SMMC-7721 cells were cultured in DMEM (GIBCO) using complete medium, including 10% FBS (GIBCO), and CoCl 2 was used to create cell hypoxic culture conditions;
(2)在本实验中,SMMC-7721细胞接种在6孔板中,6-8小时后,分别使用慢病毒(LV-Ctrl 和LV-H721)感染或对照处理,处理8小时后,部分6孔板可用于划痕实验。部分细胞可用于Transwell实验。部分细胞可种入96孔板中,换取新的完全培养基并加入150μM CoCl2工作液,48-h和96-h后MTT检测细胞增殖情况。同时,感染后24-h和48-h收集处理的细胞,可进行后续操作,如细胞周期和细胞凋亡的检测。(2) In this experiment, SMMC-7721 cells were seeded in 6-well plates, and after 6-8 hours, they were infected with lentivirus (LV-Ctrl and LV-H721) or treated separately. After 8 hours of treatment, part 6 Orifice plates can be used for scratch testing. Some cells can be used in Transwell experiments. Some cells can be seeded into 96-well plates in exchange for new complete medium and 150 μM CoCl 2 working solution. After 48-h and 96-h, MTT was used to detect cell proliferation. At the same time, the treated cells were collected at 24-h and 48-h after infection, and subsequent operations such as cell cycle and apoptosis were detected.
2、Transwell及细胞划痕实验2, Transwell and cell scratch test
(1)Transwell实验使用的是直径为6.5mm,8μm孔径的过滤膜(Corning,Inc.,Corning,NY),用于观察细胞的侵袭能力,将Matrigel(50μL DMEM加入10μl,Corning,#356234)凝胶加入滤膜上,37℃下2-h待其形成一层小的膜层,SMMC-7721细胞感染慢病毒48-h后,1×105个SMMC-7721细胞铺入上层中(无FBS,200μl DMEM),滤膜下层加入20%FBS的DMEM,37℃下培养24-h,滤膜上层细胞轻轻刷除,膜下层的细胞用紫罗兰(crystal violet)染色,200×显微镜下观察,拍照并统计数量。结果如图3(A);(1) The Transwell experiment used a filter membrane (Corning, Inc., Corning, NY) with a diameter of 6.5 mm and a pore size of 8 μm for observing the invasive ability of the cells. Matrigel (50 μL DMEM was added to 10 μl, Corning, #356234) The gel was added to the filter, and a small layer was formed at 37 ° C for 2 h. After SMMC-7721 cells were infected with lentivirus for 48-h, 1×10 5 SMMC-7721 cells were plated into the upper layer (none). FBS, 200μl DMEM), the lower layer of the filter was added with 20% FBS in DMEM, cultured at 37 °C for 24-h, the upper layer of the filter was gently brushed, the cells in the lower layer were stained with crystal violet, observed under a microscope of 200× , take pictures and count the number. The result is shown in Figure 3 (A);
(2)细胞划痕实验:3×105个SMMC-7721细胞铺入6孔板中,6-8-h后,不同慢病毒处理8小时后,去除上清并用黄色枪头划出一条痕迹,使该区域没有任何细胞存在,PBS洗3遍,再加入完全培养基,24-h及48-h分别观察细胞迁移能力并拍照计算划痕距离,在缺氧实验中,不同慢病毒处理24小时后,去除上清并用黄色枪头划出一条痕迹,此时,需要加入150μM CoCl2诱导缺氧培养条件,24-h及48-h分别观察细胞迁移能力并拍照计算划痕距离,结果如图3(B)所示。(2) Cell scratch test: 3×10 5 SMMC-7721 cells were plated into 6-well plates. After 6-8-h, after 8 hours of different lentivirus treatment, the supernatant was removed and a trace was drawn with a yellow gun head. So that no cells exist in this area, wash PBS 3 times, then add complete medium, observe cell migration ability at 24-h and 48-h, and take photos to calculate the scratch distance. In hypoxia experiment, different lentivirus treatment 24 After an hour, the supernatant was removed and a trace was drawn with a yellow tip. At this time, 150 μM CoCl 2 was added to induce hypoxic culture conditions, and 24-h and 48-h were observed for cell migration ability and photographed to calculate the scratch distance. Figure 3 (B) shows.
从图3(A)可以看出,在缺氧条件下,Transwell实验结果表明HIF-1α的敲除对SMMC-7721肝脏肿瘤细胞侵袭有很大的限制作用,各组间的统计差异明显(***,p≤0.001)。从图3(B)可以看出,在缺氧条件下,细胞划痕实验表明HIF-1α的敲除对SMMC-7721肝脏肿瘤细胞迁移有很大的限制作用,各组间的统计差异明显(***,p≤0.001)。It can be seen from Fig. 3(A) that under hypoxic conditions, Transwell results indicate that knockdown of HIF-1α has a significant restriction on SMMC-7721 liver tumor cell invasion, and statistical differences between groups are significant (* **, p ≤ 0.001). It can be seen from Fig. 3(B) that under hypoxic conditions, the cell scratch test showed that the knockdown of HIF-1α had a great restriction on the migration of SMMC-7721 liver tumor cells, and the statistical differences between the groups were significant ( ***, p ≤ 0.001).
实施例5:HIF1-α基因敲除对SMMC-7721细胞增殖、细胞周期和凋亡的影响Example 5: Effect of HIF1-α knockout on proliferation, cell cycle and apoptosis of SMMC-7721 cells
1、MTT方法检测SMMC-7721细胞增殖情况1. MTT assay for detecting proliferation of SMMC-7721 cells
不同组SMMC-7721细胞经慢病毒处理后,1×104个细胞铺入96孔板中,每个时间点做3个重复实验,6-8h后,培养基中加入20μl MTT(5mg/ml)及150μM CoCl2,后续490nm光度计检测浓度,结果如图4(A);After different groups of SMMC-7721 cells were treated with lentivirus, 1×10 4 cells were plated into 96-well plates, and 3 replicate experiments were performed at each time point. After 6-8 h, 20 μl MTT (5 mg/ml) was added to the medium. And 150μM CoCl 2 , the subsequent 490nm photometer to detect the concentration, the results are shown in Figure 4 (A);
2、PI检测细胞周期2, PI detection cell cycle
(1)3×105个细胞铺入6孔板中,每个实验组重复3孔,不同组SMMC-7721细胞经慢病毒处理后,设置24h及48h;(1) 3×10 5 cells were plated into 6-well plates, and each experimental group was repeated for 3 wells. Different groups of SMMC-7721 cells were treated with lentivirus for 24h and 48h;
(2)胰酶消化处理各组细胞后,使用PBS清洗两遍; (2) After treating each group of cells by trypsin digestion, washing twice with PBS;
(3)70%的冷乙醇固定1-h,PBS清洗两遍;(3) 70% of cold ethanol was fixed for 1-h, and PBS was washed twice;
(4)PI(PI-RNase solution;BD)溶液避光染色15分钟,操作参考说明书;(4) PI (PI-RNase solution; BD) solution was protected from light for 15 minutes, and the operation reference manual;
(5)流式细胞仪(FACScan analyzer,BD)检测PI荧光强度,FlowJo软件分析结果,结果如图4(B)及图4(C)所示;(5) The fluorescence intensity of PI was detected by flow cytometry (FACScan analyzer, BD), and the results of FlowJo software analysis showed the results as shown in Fig. 4 (B) and Fig. 4 (C);
3、Annexin V-PE、7-AAD抗体检测细胞凋亡3, Annexin V-PE, 7-AAD antibody detection of apoptosis
(1)3×105个细胞铺入6孔板中,每个实验组重复3孔。不同组SMMC-7721细胞经慢病毒处理后(对照组:Ctrl;慢病毒对照组:LV-Ctrl;慢病毒实验组:LV-H721),培养基中150μM CoCl2诱导缺氧条件,设置24h及48h;(1) 3 × 10 5 cells were plated into 6-well plates, and 3 wells were repeated for each experimental group. Different groups of SMMC-7721 cells were treated with lentivirus (control group: Ctrl; lentivirus control group: LV-Ctrl; lentivirus experimental group: LV-H721), and 150 μM CoCl 2 was used to induce hypoxic conditions in the medium, set for 24 h and 48h;
(2)胰酶消化处理各组细胞后,使用凋亡检测试剂盒(BD Biosciences,#7026588)中Annexin V-PE、7-AAD抗体孵育细胞,操作参考说明书;(2) After each group of cells were trypsinized, the cells were incubated with Annexin V-PE and 7-AAD antibody in an apoptosis detection kit (BD Biosciences, #7026588), and the reference manual was operated;
(3)流式细胞仪(FACScan analyzer,BD)检测各荧光强度,FlowJo软件分析结果,结果如图4(D);(3) Flow cytometry (FACScan analyzer, BD) to detect each fluorescence intensity, FlowJo software analysis results, the results are shown in Figure 4 (D);
从图4(A)可以看出,在缺氧条件下,HIF-1α的敲除对SMMC-7721肝脏肿瘤细胞的增殖有很大的限制作用,48-h及96-h感染后各组间的统计差异明显(***,p≤0.001);同时,图4(B)HIF-1α的敲除使得SMMC-7721细胞停留的G2/M期;图4(C)显示其G0/G1期的细胞数在HIF-1α的敲除显著降低,各组间的统计差异明显(***,p≤0.001)。图4(D)表明HIF-1α的敲除促使SMMC-7721细胞的早期凋亡;在CoCl2诱导的厌氧条件下,HIF-1α诱导SMMC-7721细胞的凋亡高达到28.6%,各组间的统计差异明显(***,p≤0.001)。It can be seen from Fig. 4(A) that under hypoxic conditions, knockdown of HIF-1α has a great restriction on the proliferation of SMMC-7721 liver tumor cells, and between groups after 48-h and 96-h infection. The statistical difference was significant (***, p ≤ 0.001); at the same time, Figure 4 (B) knockdown of HIF-1α caused SMMC-7721 cells to stay in the G2/M phase; Figure 4 (C) shows its G0/G1 phase The number of cells in the HIF-1α knockdown was significantly reduced, and the statistical difference between the groups was significant (***, p ≤ 0.001). FIG. 4 (D) shows that of HIF-1α knockout causes of early apoptotic cells SMMC-7721; under anaerobic conditions induced CoCl 2, HIF-1α induces apoptosis SMMC-7721 cells reached 28.6% higher, each group The statistical difference between the two is significant (***, p ≤ 0.001).
实施例6:慢病毒LV-H721联合HAL对小鼠原位肿瘤的治疗Example 6: Treatment of orthotopic tumors in mice by lentiviral LV-H721 in combination with HAL
1、萤火虫荧光素酶基因标记的SMMC-7721细胞的构建1. Construction of SMMC-7721 cells labeled with firefly luciferase gene
(1)携带萤火虫荧光素酶(Firefly luciferase)及mCherry标记的慢病毒LV-Fluc构建:构建pWPXLd-mCherry-Fluc质粒,并与pMD2.0及psPAX2质粒在HEK293T细胞中转染和构建慢病毒LV-Fluc,方法同实施例2;(1) Construction of lentiviral LV-Fluc carrying firefly luciferase and mCherry: construction of pWPXLd-mCherry-Fluc plasmid, and transfection and construction of lentiviral LV in HEK293T cells with pMD2.0 and psPAX2 plasmids -Fluc, the method is the same as in the embodiment 2;
(2)慢病毒LV-Fluc感染SMMC-7721细胞(MOI=2.5),稳定表达7天后,流式分选mCherry阳性标记细胞,扩大培养及冻存保存;(2) Lentivirus LV-Fluc infected SMMC-7721 cells (MOI=2.5), after stable expression for 7 days, flow sorting mCherry positive labeled cells, expanded culture and cryopreservation;
2、SMMC-7721-Fluc细胞建立的原位肿瘤及治疗2. In situ tumor and treatment established by SMMC-7721-Fluc cells
(1)裸鼠(BALB/c nu/nu小鼠,雌性,6-8周)购于上海史莱克有限生物公司((license:SCXK(HU)2007-0003,中国),小鼠在SPF级动物房操作,并按照暨南大学动物实验管理条例及广州动物伦理福利规定进行实验操作;(1) Nude mice (BALB/c nu/nu mice, female, 6-8 weeks) were purchased from Shanghai Shrek Limited Biosystems ((license: SCXK(HU) 2007-0003, China), mice at SPF level) Animal room operation, and carry out experimental operations in accordance with the regulations of the Animal Experiment Management of Jinan University and the Animal Ethics Provisions of Guangzhou;
(2)10%水合氯醛(400mg/kg)麻醉裸鼠后,原位接种3×106个SMMC-7721-Fluc细胞/只、LV-Ctr或LV-H721感染的SMMC-7721-Fluc细胞接种小鼠肝脏,缝合针(Reflex Wound Clips 7mm,Reflex Skin Closure System,Harvard apparatus)缝合伤口,7天后开展治疗实验;(2) After inoculation of nude mice with 10% chloral hydrate (400 mg/kg), inoculate 3×10 6 SMMC-7721-Fluc cells/SMMC-7721-Fluc cells infected with LV-Ctr or LV-H721 in situ. The liver of the mice was inoculated, and the wound was sutured with a suture needle (Reflex Wound Clips 7 mm, Reflex Skin Closure System, Harvard apparatus), and a treatment experiment was carried out 7 days later;
(3)HCC荷瘤小鼠分4组,每组8只,具体操作为:(1)SMMC-7721-Fluc建立的HCC肿瘤(Ctrl;n=8),(2)SMMC-7721-Fluc建立的HCC肿瘤+动脉结扎(hepatic artery ligation,HAL;n=8),(3)LV-Ctrl感染的SMMC-7721-Fluc建立的HCC肿瘤+HAL(LV-Ctrl+HAL; n=8),(4)LV-H721感染的SMMC-7721-Fluc建立的HCC肿瘤+HAL(LV-H721+HAL;n=8).其中,肿瘤细胞接种小鼠肝脏,5天后,各组进行小鼠动脉结扎实验。;(3) HCC tumor-bearing mice were divided into 4 groups, 8 in each group. The specific operations were: (1) HCC tumor established by SMMC-7721-Fluc (Ctrl; n=8), and (2) establishment of SMMC-7721-Fluc HCC tumor + arterial ligation (HAL; n = 8), (3) LV-Ctrl infected SMMC-7721-Fluc established HCC tumor + HAL (LV-Ctrl + HAL; n=8), (4) LV-H721 infected SMMC-7721-Fluc established HCC tumor + HAL (LV-H721 + HAL; n = 8). Among them, tumor cells were inoculated into mouse liver, 5 days later, each group Mouse arterial ligation experiments were performed. ;
(4)活体成像仪观察小鼠原位肝脏肿瘤的生长情况,腹腔注射200μl体积的15mg/ml的D-荧光素钾盐(Goldbio),观察时间点为HAL及慢病毒处理后的第5、10、15和20天,拍照记录数据;(4) The growth of orthotopic liver tumors in mice was observed by a living imager. A volume of 15 mg/ml of D-luciferin potassium salt (Goldbio) was intraperitoneally injected, and the time point was HAL and the fifth time after lentivirus treatment. 10, 15 and 20 days, photo recording data;
(5)制作小鼠肿瘤区域荧光强度与时间的关系图;(5) A relationship between the fluorescence intensity of the mouse tumor region and time;
(6)小鼠HAL及慢病毒处理后第20天,处死小鼠并取出肿瘤组织,检测其CD31表达情况及细胞凋亡情况,结果如图5(A)-图5(D)所示;(6) On the 20th day after treatment with mouse HAL and lentivirus, the mice were sacrificed and the tumor tissues were taken out, and the expression of CD31 and apoptosis were detected. The results are shown in Fig. 5(A)-Fig. 5(D);
图5(A)表明,在处理后的第20天,活体成像结果表明HAL处理组能够显著抑制HCC肿瘤的生长,其中LV-H721+HAL实验组抑制HCC生长效果最好。图5(B)显示在处理后的第20天,小鼠原位肿瘤在小鼠活体生长时观察到的各组荧光情况。图5(C)在处理后的第20天,小鼠原位肿瘤在小鼠剥离情况下的生长情况。图5(D)各处理组小鼠生存曲线图结果表明LV-H721+HAL实验组能够显著延长荷瘤小鼠的生存时间,统计差异明显(*,p≤0.05)。Figure 5 (A) shows that on the 20th day after treatment, the results of in vivo imaging showed that the HAL-treated group significantly inhibited the growth of HCC tumors, and the LV-H721+HAL experimental group had the best inhibition of HCC growth. Fig. 5(B) shows the fluorescence of each group observed in the mouse in situ tumor in vivo growth on the 20th day after the treatment. Fig. 5(C) shows the growth of mouse orthotopic tumors in the case of mouse exfoliation on the 20th day after the treatment. Fig. 5(D) Survival curve of mice in each treatment group showed that LV-H721+HAL experimental group can significantly prolong the survival time of tumor-bearing mice, and the statistical difference is obvious (*, p≤0.05).
3、肿瘤组织的获得和免疫组化检测肿瘤组织中CD31蛋白的表达情况3. Tumor tissue acquisition and immunohistochemistry were used to detect the expression of CD31 protein in tumor tissues.
(1)取出上述不同处理组的原位肝脏肿瘤组织;(1) taking out the orthotopic liver tumor tissues of the different treatment groups described above;
(2)剥离了的小鼠肿瘤,4%多聚甲醛固定肿瘤组织;(2) Stripped mouse tumor, 4% paraformaldehyde fixed tumor tissue;
(3)洗涤:材料经固定后,组织中的固定液必须冲洗干净,因为残留在组织中的固定液,有的不利于染色,有的产生沉淀或结晶影响观察;(3) Washing: After the material is fixed, the fixing liquid in the tissue must be washed out, because the fixing liquid remaining in the tissue is not conducive to dyeing, and some precipitation or crystallization influence observation;
(4)脱水:30%、50%、70%、80%、90%各级乙醇溶液脱水各40min,放入95%、100%各两次,每次20min(各种材料经固定与洗涤后,组织中含有大量水分,由于水与石蜡不能互溶,所以必须将组织中的水分除去);(4) Dehydration: 30%, 50%, 70%, 80%, 90% ethanol solution of each stage is dehydrated for 40 minutes, placed in 95%, 100% twice each for 20 minutes (after fixing and washing various materials) , the tissue contains a lot of water, because water and paraffin can not be mutually soluble, so the water in the tissue must be removed);
(5)透明:100%酒精、二甲苯等量混合液15min,二甲苯0.5h(或至透明为止),须换一次二甲苯(由于乙醇与石蜡不相溶,而二甲苯既能溶于乙醇又能溶于石蜡,所以脱水后还要经过二甲苯以过渡,当组织中全部被二甲苯占有时,光线可以透过,组织呈现出不同程度的透明状态);(5) Transparent: 100% alcohol, xylene equal volume mixture for 15min, xylene 0.5h (or until transparent), xylene must be changed once (because ethanol is incompatible with paraffin, and xylene is soluble in ethanol) It is also soluble in paraffin, so it needs to pass through xylene to transfer after dehydration. When the whole part of the tissue is occupied by xylene, the light can pass through, and the tissue shows different degrees of transparency);
(6)透蜡:放入二甲苯和石蜡各半的混合液15min,再放入石蜡I、石蜡II透蜡各20~30min(透蜡的目的是除去组织中的透明剂如二甲苯等,使石蜡渗透到组织内部达到饱和程度以便包埋。透蜡时间根据组织的透蜡时间较长,约需1-2天,透蜡应在恒温箱内进行,并保持箱内温度在55-60℃左右,注意温度不要过高,以免组织发脆。置于恒温箱0.5h);(6) Permeation wax: a mixture of xylene and paraffin wax is placed for 15 minutes, and then paraffin I and paraffin II permeation wax are placed for 20 to 30 minutes each time (the purpose of permeating wax is to remove the transparent agent such as xylene in the tissue, etc. The paraffin is infiltrated into the interior of the tissue to be saturated for embedding. The wax penetration time is longer depending on the waxing time of the tissue, which takes about 1-2 days. The wax penetration should be carried out in the incubator and keep the temperature inside the box at 55-60. °C or so, pay attention to the temperature is not too high, so as not to be brittle. Placed in the incubator 0.5h);
(7)包埋:将经过透蜡的组织连同熔化的石蜡,一起倒入容器内,然后立即投入冷水中,使其立刻凝固成蜡块。用于包埋的石蜡的熔点在50-60℃之间,包埋时应根据组织材料、切片厚度、气候条件等因素,选择不同熔点的石蜡,一般动物材料常用的石蜡熔点为52-56℃;(7) Embedding: The wax-transparent tissue was poured into a container together with the melted paraffin, and then immediately poured into cold water to immediately solidify into a wax block. The melting point of paraffin wax used for embedding is between 50-60 ° C. When embedded, the paraffin wax with different melting point should be selected according to the materials of the tissue, the thickness of the slice, the climatic conditions, etc. The melting point of paraffin wax commonly used in animal materials is 52-56 ° C. ;
(8)切片、贴片;(8) slicing, patching;
(9)免疫组化制片与观察,本实验需要使用免疫组化DAB法检测试剂盒:(9) Immunohistochemical preparation and observation, this experiment requires the use of immunohistochemical DAB assay kit:
1)组织切片在60℃恒温箱中烘烤2小时;2)组织切片置于二甲苯(I)中浸泡10min,更换到二甲苯(II)后再浸泡10min;3)无水乙醇(I)中浸泡5min;4)无水乙醇(II)中浸泡2min;5)95%乙醇中浸泡2min;6)70%乙醇中浸泡2min;7)单蒸水中浸泡2min;8)抗原修复:用0.01M柠檬酸三钠微波法修复;9)静置20min使切片恢复至室温后,三蒸水中浸泡冲洗;10)PBS洗浸泡5min;11)3%H2O2去离子水,室温静置10min,TBST洗2-3次各5min;12)滴加正常山羊血清封闭液,室温15min;13)甩去多余液体,加入CD31抗体(1∶100,CST,USA),4度过夜;14)TBST洗3次各3min;15)滴加辣根过氧化化物酶标记的二抗40-50μl,室温静置30min;TBST洗3次各3min;16)DAB显色, 在显微镜下掌握染色程度;17)PBS或自来水冲洗10min;18)苏木精复染1min左右,1%盐酸酒精分化;19)自来水冲洗10-15min;20)脱水:95%酒精10秒两次,100%酒精10秒两次,二甲苯10秒两次;21)烘片封片;22)显微镜观察并扫描获得肝脏肿瘤组织中CD31蛋白的表达情况并统计细胞面积及统计差异,结果如图6(A)-图6(B)所示;1) Tissue sections were baked in a 60 ° C incubator for 2 hours; 2) Tissue sections were placed in xylene (I) for 10 min, replaced with xylene (II) and then soaked for 10 min; 3) Anhydrous ethanol (I) Soak for 5 min; 4) soak for 2 min in absolute ethanol (II); 5) soak for 2 min in 95% ethanol; 6) soak for 2 min in 70% ethanol; 7) soak for 2 min in single distilled water; 8) antigen repair: use 0.01M Trisodium citrate microwave method; 9) After standing for 20 minutes, the slice was returned to room temperature, soaked in three steamed water; 10) immersed in PBS for 5 min; 11) 3% H 2 O 2 deionized water, and allowed to stand at room temperature for 10 min. TBST wash 2-3 times for 5 min each; 12) Add normal goat serum blocking solution at room temperature for 15 min; 13) Remove excess liquid, add CD31 antibody (1:100, CST, USA), 4 degrees overnight; 14) TBST wash 3 times each for 3 min; 15) add 40-50 μl of horseradish peroxidase-labeled secondary antibody, let stand for 30 min at room temperature; wash TBST 3 times for 3 min each; 16) DAB color, grasp the degree of staining under the microscope; 17) Rinse with PBS or tap water for 10 min; 18) Hematoxylin counterstaining for 1 min, 1% hydrochloric acid alcohol differentiation; 19) Tap water rinse for 10-15 min; 20) Dehydration: 95% alcohol for 10 seconds twice, 100% alcohol for 10 seconds twice Xylene twice in 10 seconds; 21) baking sheet; 22) microscopic observation and scanning to obtain the expression of CD31 protein in liver tumor tissue and statistical cell area and statistical difference, the results are shown in Figure 6 (A) - Figure 6 (B )
4、TUNEL试剂盒检测HCC肿瘤组织中细胞的凋亡情况4, TUNEL kit to detect cell apoptosis in HCC tumor tissue
DNA断裂位点的3’-羟基末端标记法结合组织化学方法(TUNEL)检测凋亡细胞,该法可以准确定位并发现凋亡发生中早期的DNA断裂,使用的是Promega的试剂盒(DeadEndTM Colorimetric TUNEL DAB系统):Apoptosis cells were detected by 3'-hydroxyl end labeling of DNA cleavage sites in combination with histochemical methods (TUNEL). This method can accurately locate and detect early DNA breaks during apoptosis, using Promega kit (DeadEndTM Colorimetric) TUNEL DAB system):
1)用二甲苯浸洗2次,每次5min;2)用梯度乙醇(100%、95%、90%、80%、70%)各浸洗1次,每次3min;3)PBS漂洗2次;4)用蛋白酶K工作液处理组织15-30min在21-37℃或者加细胞通透液8min;5)PBS漂洗2次;6)制备TUNEL反应混合液,处理组用50μl TdT+450μl荧光素标记的dUTP液混匀;而阴性对照组仅加50μl荧光素标记的dUTP液,阳性对照组先加入100μl DNase I,反应在15-25℃×10min,后面步骤同处理组;7)玻片干后,加50μl TUNEL反应混合液(阴性对照组仅加50μl荧光素标记的dUTP液)于标本上,加盖玻片或封口膜在暗湿盒中反应37℃×1-h;8)PBS漂洗3次;9)可以加1滴PBS在荧光显微镜下计数凋亡细胞(激发光波长为450-500nm,检测波长为515-565nm);10)玻片干后加50μl converter-POD于标本上,加盖玻片或封口膜在暗湿盒中反应37℃×30min;11)PBS漂洗3次;12)在组织处加50-100μl DAB底物,反应15-25℃×10min;13)PBS漂洗3次;14)拍照后再用苏木素或甲基绿复染,几秒后立即用自来水冲洗,梯度酒精脱水、二甲苯透明、中性树胶封片,结果如图6(C)-图6(D)所示;1) Dip twice with xylene for 5 min each time; 2) Dip with gradient ethanol (100%, 95%, 90%, 80%, 70%) for 3 min each time; 3) PBS rinse 2 4) Treatment of tissue with proteinase K working solution for 15-30 min at 21-37 ° C or addition of cell permeable solution for 8 min; 5) rinsing twice with PBS; 6) Preparation of TUNEL reaction mixture, treatment group with 50 μl TdT + 450 μl fluorescence The labeled dUTP solution was mixed. In the negative control group, only 50 μl of fluorescein-labeled dUTP solution was added. The positive control group was firstly added with 100 μl of DNase I, and the reaction was carried out at 15-25 ° C for 10 min, followed by the same treatment group; 7) slide After drying, add 50 μl of TUNEL reaction mixture (negative control group only add 50 μl of fluorescein-labeled dUTP solution) to the specimen, and cover the slide or sealant in a dark humid chamber to react at 37 ° C × 1-h; 8) PBS Rinsing 3 times; 9) Apoptotic cells can be counted under fluorescent microscope with 1 drop of PBS (excitation wavelength is 450-500 nm, detection wavelength is 515-565 nm); 10) slide is dried and 50 μl of converter-POD is added to the specimen. , cover glass or seal film in a dark wet box reaction 37 ° C × 30min; 11) PBS rinse 3 times; 12) add 50-100μl DAB substrate in the tissue, the reaction 15-25 ° C × 10min; 13) rinsing 3 times with PBS; 14) After dyeing with hematoxylin or methyl green, immediately rinse with tap water after a few seconds, gradient alcohol dehydration, xylene transparent, neutral gum seal, the result is shown in Figure 6 (C) - Figure 6 (D);
TUNEL:细胞核中出现棕黄色颗粒为阳性,即凋亡细胞,每例切片计数5个高倍镜视野下的凋亡细胞数,其平均值即为该例肿瘤的凋亡细胞数;TUNEL: Brown-yellow granules were positive in the nucleus, ie apoptotic cells. The number of apoptotic cells in 5 high-power fields was counted in each section, and the average value was the number of apoptotic cells in the tumor.
MVD(微血管密度):首先在低倍镜下观察每例切片中5个血管密度最高区域,然后再高倍镜下计数每个视野下的微血管数目。其平均值为该例肿瘤的MVD值;MVD (microvessel density): First, the five regions with the highest vascular density in each section were observed under a low power microscope, and then the number of microvessels in each field of view was counted under high magnification. The average value is the MVD value of the tumor of this case;
统计分析:本发明中所有的统计结果由SPSS 17.0软件(SPSS Inc.,Chicago,IL,USA)获得,两组数据间的统计学差异由t检验获得(unpaired two-tailed Student’s t-test),小鼠的生存时间曲线Kaplan-Meier分析结果获得,统计差异由log-rank检验获得,统计显著性差异标记为:*,p≤0.05,**,p≤0.01,***,p≤0.001。本发明中所以实验已经重复四遍。Statistical analysis: All statistical results in the present invention were obtained by SPSS 17.0 software (SPSS Inc., Chicago, IL, USA), and statistical differences between the two sets of data were obtained by untested two-tailed Student's t-test. The survival time curve of the mice was obtained by Kaplan-Meier analysis, and the statistical difference was obtained by log-rank test. The statistically significant differences were marked as: *, p ≤ 0.05, **, p ≤ 0.01, ***, p ≤ 0.001. In the present invention, the experiment has been repeated four times.
从图6(A)可以看出,经HAL处理后的肿瘤血管存在新生成的情况,CD31阳性细胞在LV-H721+HAL实验组中表达量少,预示着其肿瘤内的血管生成受到明显抑制。图6(B)统计结果也表明,与其他HAL处理的两组比较,CD31+细胞的面积在LV-H721+HAL实验组中显著性抑制(*,p≤0.05)。同时,图6(C)TUNEL结果也表明,在LV-H721+HAL实验组中,HCC的肿瘤组织中细胞凋亡效果明显。图6(D)统计结果表明,与其他对照组比较,LV-H721+HAL实验组中肿瘤细胞凋亡率十分显著(*,p≤0.05)。It can be seen from Fig. 6(A) that there is a new generation of tumor blood vessels after HAL treatment, and the expression of CD31 positive cells in the LV-H721+HAL experimental group is small, indicating that the angiogenesis in the tumor is significantly inhibited. . The statistical results of Fig. 6(B) also showed that the area of CD31+ cells was significantly inhibited in the LV-H721+HAL experimental group (*, p ≤ 0.05) compared with the other HAL-treated groups. At the same time, the TUNEL results in Fig. 6(C) also showed that the apoptosis effect was evident in the tumor tissues of HCC in the LV-H721+HAL experimental group. Figure 6 (D) statistical results show that compared with other control groups, the apoptosis rate of tumor cells in the LV-H721 + HAL experimental group is very significant (*, p ≤ 0.05).
综上所述,用于靶向敲除HIF-1α的慢病毒在SMMC-7721肝脏肿瘤细胞中能够有效敲除HIF-1α基因,并且能够有效抑制肿瘤细胞生长,它包括抑制肿瘤细胞迁移与细胞侵袭,G2/M期的细胞周期停滞以及促进肿瘤细胞凋亡等,效果明显并具备显著性统计差异,不仅如此,LV-H721与肝动脉结扎术HAL(hepatic artery ligation)能够显著抑制小鼠HCC生长和延长原位HCC荷瘤小鼠的生存时间。因此,这种基因治疗与TAE/TACE结合的方法较单纯使用TAE/TACE治疗HCC的效果更明显,其临床使用潜力更大。In summary, the lentivirus used to target knockout of HIF-1α can effectively knock out the HIF-1α gene in SMMC-7721 liver tumor cells, and can effectively inhibit tumor cell growth, including inhibition of tumor cell migration and cells. Invasion, G2/M phase cell cycle arrest and promotion of tumor cell apoptosis, etc., the effect is obvious and statistically significant difference, not only that, LV-H721 and hepatic artery ligation HAL (hepatic artery ligation) can significantly inhibit mouse HCC Growth and prolongation of survival time in in situ HCC tumor-bearing mice. Therefore, the combination of gene therapy and TAE/TACE is more effective than TAE/TACE in the treatment of HCC, and its clinical use potential is greater.
申请人声明,本发明通过上述实施例来说明本发明的详细方法,但本发明并不局限于上述详细方法,即不意味着本发明必须依赖上述详细方法才能实施。所属技术领域的技术人员应该明了,对本发明的任何改进,对本发明产品各原料的等效替换及辅助成分的添加、具体方式的选择等,均落在本发明的保护范围和公开范围之内。 The Applicant declares that the present invention is described by the above-described embodiments, but the present invention is not limited to the above detailed methods, that is, it does not mean that the present invention must be implemented by the above detailed methods. It should be apparent to those skilled in the art that any modifications of the present invention, equivalent substitution of the various materials of the products of the present invention, addition of auxiliary components, selection of specific means, and the like, are all within the scope of the present invention.

Claims (10)

  1. 一种sgRNA,其特征在于,所述sgRNA的核苷酸序列如SEQ ID NO.1-3所示或与其就有至少80%同一性的核苷酸序列。A sgRNA characterized in that the nucleotide sequence of the sgRNA is as shown in SEQ ID NO. 1-3 or a nucleotide sequence having at least 80% identity thereto.
  2. 根据权利要求1所述的sgRNA,其特征在于,所述sgRNA的核苷酸序列如SEQ ID NO.3所示。The sgRNA according to claim 1, wherein the nucleotide sequence of the sgRNA is as shown in SEQ ID NO.
  3. 一种CRISP/Cas9慢病毒载体,其特征在于,所述慢病毒载体包含如权利要求1或2所述的sgRNA的核苷酸序列。A CRISP/Cas9 lentiviral vector, characterized in that the lentiviral vector comprises the nucleotide sequence of the sgRNA of claim 1 or 2.
  4. 一种如权利要求3所述的CRISP/Cas9慢病毒载体的构建方法,其特征在于,包括如下步骤:A method for constructing a CRISP/Cas9 lentiviral vector according to claim 3, comprising the steps of:
    (1)根据HIF-1α第一个外显子序列设计sgRNAs;(1) designing sgRNAs according to the first exon sequence of HIF-1α;
    (2)将得到的sgRNAs插入pLenti-CAS载体中,得到所述CRISP/Cas9慢病毒载体。(2) The obtained sgRNAs were inserted into a pLenti-CAS vector to obtain the CRISP/Cas9 lentiviral vector.
  5. 一种重组慢病毒,其特征在于,将包含如权利要求3所述的CRISP/Cas9慢病毒载体与包装辅助质粒psPAX2、pMD2.G和PEImax共转染哺乳细胞得到的重组慢病毒。A recombinant lentivirus characterized by comprising a recombinant lentivirus comprising a CRISP/Cas9 lentiviral vector according to claim 3 and a packaging helper plasmid psPAX2, pMD2.G and PEImax co-transfected with a mammalian cell.
  6. 根据权利要求5所述的重组慢病毒,其特征在于,所述哺乳细胞为HEK293T细胞。The recombinant lentivirus according to claim 5, wherein the mammalian cell is a HEK293T cell.
  7. 一种如权利要求3所述的CRISP/Cas9慢病毒载体用于敲除HIF-1α基因。A CRISP/Cas9 lentiviral vector according to claim 3 for use in knocking out the HIF-1α gene.
  8. 一种药物组合物,其特征在于,所述药物组合物包括如权利要求3所述的慢病毒载体和/或如权利要求5所述的重组慢病毒。A pharmaceutical composition comprising the lentiviral vector of claim 3 and/or the recombinant lentivirus of claim 5.
  9. 如权利要求3所述的慢病毒载体、如权利要求5所述的重组慢病毒或如权利要求8所述的药物组合物在制备抗肿瘤药物中的应用;Use of the lentiviral vector according to claim 3, the recombinant lentivirus according to claim 5 or the pharmaceutical composition according to claim 8 for the preparation of an antitumor drug;
    优选地,所述肿瘤为肝脏肿瘤,优选为肝癌;Preferably, the tumor is a liver tumor, preferably liver cancer;
    优选地,所述组合物还包括药学上接受的辅料;Preferably, the composition further comprises a pharmaceutically acceptable excipient;
    优选地,所述辅料为赋形剂、稀释剂、载体、调味剂、粘合剂和填充剂中的任意一种或至少两种的组合。Preferably, the excipient is any one or a combination of at least two of an excipient, a diluent, a carrier, a flavoring agent, a binder, and a filler.
  10. 如权利要求3所述的慢病毒载体、如权利要求5所述的重组慢病毒或如权利要求8所述的药物组合物用于治疗肝癌;The lentiviral vector according to claim 3, the recombinant lentivirus according to claim 5 or the pharmaceutical composition according to claim 8 for treating liver cancer;
    优选地,所述重组慢病毒和/或药物组合物与手术、化学药物治疗或放射治疗中的任意一种或至少两种的组合联合使用;Preferably, the recombinant lentivirus and/or pharmaceutical composition is used in combination with any one or a combination of at least two of surgery, chemotherapy or radiation therapy;
    优选地,所述手术为肝脏动脉栓塞术和/或肝动脉化疗栓塞术。 Preferably, the surgery is hepatic artery embolization and/or transcatheter arterial chemoembolization.
PCT/CN2017/115331 2017-12-08 2017-12-08 Sgrna, lentivirus vector constructed therefrom, and application thereof WO2019109359A1 (en)

Priority Applications (2)

Application Number Priority Date Filing Date Title
PCT/CN2017/115331 WO2019109359A1 (en) 2017-12-08 2017-12-08 Sgrna, lentivirus vector constructed therefrom, and application thereof
CN201780001959.9A CN108337893B (en) 2017-12-08 2017-12-08 Slow virus carrier and the application of a kind of sgRNA and its building

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/CN2017/115331 WO2019109359A1 (en) 2017-12-08 2017-12-08 Sgrna, lentivirus vector constructed therefrom, and application thereof

Publications (1)

Publication Number Publication Date
WO2019109359A1 true WO2019109359A1 (en) 2019-06-13

Family

ID=62924209

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/CN2017/115331 WO2019109359A1 (en) 2017-12-08 2017-12-08 Sgrna, lentivirus vector constructed therefrom, and application thereof

Country Status (2)

Country Link
CN (1) CN108337893B (en)
WO (1) WO2019109359A1 (en)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN114703183A (en) * 2022-03-10 2022-07-05 中山大学附属第六医院 sgRNA and CRISPR/Cas9 lentivirus system for targeted knockout of HIF-1 alpha gene and application

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003029406A2 (en) * 2001-09-28 2003-04-10 The Regents Of The University Of California USE OF HIF-1α VARIANTS TO ACCELERATE WOUND HEALING
CN105709239A (en) * 2016-03-22 2016-06-29 山东省肿瘤医院 Inhibitor for HIF-1alpha relevant to non-small cell lung cancer radiotherapy
CN106580512A (en) * 2017-01-03 2017-04-26 哈尔滨医科大学 Colorectal cancer early hepatic metastasis animal model and construction method and application thereof
CN107106669A (en) * 2014-11-04 2017-08-29 南加利福尼亚大学 Composition and method for treating the cancer for over-expressing the α of HIF 1

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003029406A2 (en) * 2001-09-28 2003-04-10 The Regents Of The University Of California USE OF HIF-1α VARIANTS TO ACCELERATE WOUND HEALING
CN107106669A (en) * 2014-11-04 2017-08-29 南加利福尼亚大学 Composition and method for treating the cancer for over-expressing the α of HIF 1
CN105709239A (en) * 2016-03-22 2016-06-29 山东省肿瘤医院 Inhibitor for HIF-1alpha relevant to non-small cell lung cancer radiotherapy
CN106580512A (en) * 2017-01-03 2017-04-26 哈尔滨医科大学 Colorectal cancer early hepatic metastasis animal model and construction method and application thereof

Also Published As

Publication number Publication date
CN108337893A (en) 2018-07-27
CN108337893B (en) 2019-11-26

Similar Documents

Publication Publication Date Title
Sun et al. HIF-1α overexpression in mesenchymal stem cell-derived exosomes mediates cardioprotection in myocardial infarction by enhanced angiogenesis
Lai et al. MicroRNA-221/222 mediates ADSC-exosome-induced cardioprotection against ischemia/reperfusion by targeting PUMA and ETS-1
Enomoto et al. Tissue remodeling induced by hypersecreted epidermal growth factor and amphiregulin in the airway after an acute asthma attack
KR101573009B1 (en) Compositions and methods to modulate cell membrane resealing
Zhang et al. Hes1, a Notch signaling downstream target, regulates adult hippocampal neurogenesis following traumatic brain injury
Li et al. HIMF deletion ameliorates acute myocardial ischemic injury by promoting macrophage transformation to reparative subtype
Du et al. Pentamethylquercetin protects against cardiac remodeling via activation of Sestrin2
Li et al. Suppression of the expression of hypoxia-inducible factor-1α by RNA interference alleviates hypoxia-induced pulmonary hypertension in adult rats
Dong et al. Mesenchymal-endothelial transition-derived cells as a potential new regulatory target for cardiac hypertrophy
EP3747440A1 (en) Method for destroying cellular mechanical homeostasis and promoting regeneration and repair of tissues and organs, and use thereof
WO2019109359A1 (en) Sgrna, lentivirus vector constructed therefrom, and application thereof
Tang et al. TMSB4 overexpression enhances the potency of marrow mesenchymal stromal cells for myocardial repair
Sato et al. Detection of TUNEL-positive cardiomyocytes and c-kit-positive progenitor cells in children with congenital heart disease
Guo et al. NKRF in Cardiac Fibroblasts Protects against Cardiac Remodeling Post‐Myocardial Infarction via Human Antigen R
Qin et al. Wisp2 disruption represses Cxcr4 expression and inhibits BMSCs homing to injured liver
CN110613847B (en) Application of substance for inhibiting angiopoietin-like protein 8
US20240026354A1 (en) Suppressing hippo signaling in the stem cell niche promotes skeletal muscle regeneration
Zou et al. MCPIP-1 knockdown enhances endothelial colony-forming cell angiogenesis via the TFRC/AKT/mTOR signaling pathway in the ischemic penumbra of MCAO mice
He et al. The innate immune sensor STING accelerates neointima formation via NF-κB signaling pathway
CN116426469B (en) Application of LAP2 alpha in mesenchymal stem cell adipogenic differentiation
CN114058591B (en) Recombinant mesenchymal stem cell and application thereof
EP4009051A1 (en) Use of dkk1 inhibitor in prevention and/or treatment of tumor cachexia and diseases associated with diabetes
Xiao et al. Cardiopulmonary progenitors facilitate cardiac repair via exosomal transfer of miR‐27b‐3p targeting the SIK1‐CREB1 axis
Yang et al. Astragaloside IV-induced BMSC exosomes promote neovascularization and protect cardiac function in myocardial infarction mice via the miR-411/HIF-1α axis
Adnani The Role of Neuropeptide Y and NPY5R in Ewing Sarcoma Metastasis

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 17934020

Country of ref document: EP

Kind code of ref document: A1

NENP Non-entry into the national phase

Ref country code: DE

122 Ep: pct application non-entry in european phase

Ref document number: 17934020

Country of ref document: EP

Kind code of ref document: A1