WO2016201523A1 - Composition - Google Patents
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- WO2016201523A1 WO2016201523A1 PCT/AU2016/050517 AU2016050517W WO2016201523A1 WO 2016201523 A1 WO2016201523 A1 WO 2016201523A1 AU 2016050517 W AU2016050517 W AU 2016050517W WO 2016201523 A1 WO2016201523 A1 WO 2016201523A1
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- dsrna
- composition
- insect
- double stranded
- stranded rna
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N25/00—Biocides, pest repellants or attractants, or plant growth regulators, characterised by their forms, or by their non-active ingredients or by their methods of application, e.g. seed treatment or sequential application; Substances for reducing the noxious effect of the active ingredients to organisms other than pests
- A01N25/22—Biocides, pest repellants or attractants, or plant growth regulators, characterised by their forms, or by their non-active ingredients or by their methods of application, e.g. seed treatment or sequential application; Substances for reducing the noxious effect of the active ingredients to organisms other than pests containing ingredients stabilising the active ingredients
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N25/00—Biocides, pest repellants or attractants, or plant growth regulators, characterised by their forms, or by their non-active ingredients or by their methods of application, e.g. seed treatment or sequential application; Substances for reducing the noxious effect of the active ingredients to organisms other than pests
- A01N25/08—Biocides, pest repellants or attractants, or plant growth regulators, characterised by their forms, or by their non-active ingredients or by their methods of application, e.g. seed treatment or sequential application; Substances for reducing the noxious effect of the active ingredients to organisms other than pests containing solids as carriers or diluents
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N57/00—Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds
- A01N57/10—Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds having phosphorus-to-oxygen bonds or phosphorus-to-sulfur bonds
- A01N57/16—Biocides, pest repellants or attractants, or plant growth regulators containing organic phosphorus compounds having phosphorus-to-oxygen bonds or phosphorus-to-sulfur bonds containing heterocyclic radicals
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- A—HUMAN NECESSITIES
- A01—AGRICULTURE; FORESTRY; ANIMAL HUSBANDRY; HUNTING; TRAPPING; FISHING
- A01N—PRESERVATION OF BODIES OF HUMANS OR ANIMALS OR PLANTS OR PARTS THEREOF; BIOCIDES, e.g. AS DISINFECTANTS, AS PESTICIDES OR AS HERBICIDES; PEST REPELLANTS OR ATTRACTANTS; PLANT GROWTH REGULATORS
- A01N63/00—Biocides, pest repellants or attractants, or plant growth regulators containing microorganisms, viruses, microbial fungi, animals or substances produced by, or obtained from, microorganisms, viruses, microbial fungi or animals, e.g. enzymes or fermentates
- A01N63/60—Isolated nucleic acids
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/111—General methods applicable to biologically active non-coding nucleic acids
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/11—DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
- C12N15/113—Non-coding nucleic acids modulating the expression of genes, e.g. antisense oligonucleotides; Antisense DNA or RNA; Triplex- forming oligonucleotides; Catalytic nucleic acids, e.g. ribozymes; Nucleic acids used in co-suppression or gene silencing
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/10—Type of nucleic acid
- C12N2310/14—Type of nucleic acid interfering N.A.
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2310/00—Structure or type of the nucleic acid
- C12N2310/30—Chemical structure
- C12N2310/35—Nature of the modification
- C12N2310/351—Conjugate
- C12N2310/3511—Conjugate intercalating or cleaving agent
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2320/00—Applications; Uses
- C12N2320/30—Special therapeutic applications
- C12N2320/32—Special delivery means, e.g. tissue-specific
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N2320/00—Applications; Uses
- C12N2320/50—Methods for regulating/modulating their activity
- C12N2320/51—Methods for regulating/modulating their activity modulating the chemical stability, e.g. nuclease-resistance
Definitions
- the present invention relates to, inter alia, compositions for insects, to methods of preparing such compositions, and to methods of using such compositions.
- H. armigera is also a major agricultural pest endemic to Europe, Asia and Africa.
- H. armigera has been estimated to cause US$2 billion in crop damage annually, despite the expenditure of US$500 million worth of pesticides for its control.
- H. armigera is just one species in the order of Lepidoptera, which is the second largest insect order comprised of moths and butterflies. The larval stage of moths cause major damage to many economically valuable crops including cotton, tobacco, tomato, corn, sorghum, lucerne, sunflower, pulses and wheat.
- RNAi or RNA interference (also known as RNA silencing), has been used for genetic research in insects and it has promise in entomology as it provides target- specific silencing of gene expression.
- RNAi RNA interference
- RNA silencing also known as RNA silencing
- RNAi mechanism involves first introducing double stranded RNA (dsRNA) into the insect haemocoel (for example via ingestion/injection/soaking), after which the dsRNA proceeds to enter the insect cells via endocytosis or via transmembrane proteins.
- dsRNA double stranded RNA
- RISC RNA induced silencing complex
- RNAi mechanism A major difficulty in using the RNAi mechanism is how to effectively deliver dsRNA to insects.
- most laboratory studies of RNAi in insects have utilised microinjection of in vitro synthesised dsRNAs into embryos or the hemocoel.
- microinjection as a delivery mechanism is not feasible for large-scale plant protection.
- Another strategy is for insects to ingest the dsRNA by providing it mixed in the diet, but this means that the dsRNA enters the insect alimentary canal, and especially the midgut.
- the environment of the midgut is hostile to dsRNA, due to the pH of the midgut and the presence of gut nucleases.
- Nucleases capable of degrading dsRNA may also be present in the saliva of insects (as recently reported for the tarnished plant bug Lygus lineolaris by Allen and Walker (2012) Saliva of Lygus lineolaris digests double stranded ribonucleic acids. Journal of Insect Physiology, 58, 391-396). Furthermore, research indicates that systemic RNAi responses may be more robust in less derived insect species, but some more derived Dipteran and Lepidopteran species may be refractory to systemic RNAi.
- dsRNA is vulnerable to nucleases in the environment, and also to ultraviolet light, specifically if it has to be provided as a topical application on the plant surface.
- dsRNA topically applied to a plant for protection against viruses could not protect the plants 7 days post application.
- the dsRNA was not able to protect the plants against the virus (Tenllado, F. & J.R. Diaz -Ruiz, (2001) Double-stranded RNA-mediated interference with plant virus infection. Journal Virology 75: 12288-12297).
- RNAi Major challenges for application of RNAi to insects (after effective gene targets have been identified) are the stability of dsRNA prior to administration to the insect, and the delivery of dsRNA to the insect.
- the present invention provides a composition for delivery of dsRNA to an insect having a basic pH within its alimentary canal, wherein the composition comprises dsRNA adsorbed onto a clay complex, and wherein the clay complex is configured to release the dsRNA at the basic pH.
- the composition protects the dsRNA from UV light and from nucleases.
- the composition advantageously may be sprayed on crops, for example, to protect the crop against the insects.
- the dsRNA remains adsorbed on the clay complex until the composition encounters a basic pH, such as within the insects' alimentary canal.
- a basic pH such as within the insects' alimentary canal.
- insecticidal dsRNA is used in a clay composition sprayed on plant leaves, it has been shown that a significant proportion of insects eating these leaves are adversely affected by the dsRNA or die.
- the composition accordingly provides a system for delivery of dsRNA to insects having a basic pH within its alimentary canal.
- the dsRNA accordingly may be any suitable dsRNA for use with insects and need not be limited to insecticidal dsRNA.
- the dsRNA adversely affects the insect, and is especially insecticidal dsRNA.
- the composition may be an insecticidal composition.
- the composition may be for protecting plants. Insects may also be carriers for various diseases (such as malaria and dengue fever). The composition therefore may be for use in protecting humans and animals against disease.
- dsRNA that adversely affects an insect may include dsRNA that causes insect mortality or affects the normal function or behaviour of that insect or affects the physiological function of the insect, including sterilisation, viral infection and decreased mobility.
- the composition may be suitable for any type of insect, as long as the insect has a basic pH within its alimentary canal.
- the insect is a chewing or a biting insect.
- a chewing or biting insect will ingest the composition upon consuming a food coated with the composition.
- the insect is of the order Diptera, Lepidoptera or Coleoptera.
- Exemplary insects include one or more of the following:
- Insects of the order Diptera especially flies, mosquitos, gnats or midges; especially insects of the family Tephritidae or Drosophilidae; more especially of the family Tephritidae; even more especially of the genus Bactrocera or Vidalia; most especially fruit flies;
- Insects of the order Lepidoptera especially moths or butterflies (including caterpillars)); especially:
- Insects of the order Coleoptera especially example weevils or other beetles
- insects of the superfamily Curculionoidea especially of the family Curculionidae, most especially weevils.
- the insect may be an insect larvae (for example, for the order Lepidoptera the insect larvae may be a caterpillar).
- the insect may be a pest to plants (such plants may be as further defined below).
- the insect is of the order Lepidoptera, especially of the family Noctuidae; especially of the genus Helicoverpa; most especially Helicoverpa armigera.
- the insect has a basic pH within its alimentary canal.
- the insect may have a basic pH within one or more of its foregut (stomodeam), midgut (mesenteron) or hindgut (proctodeam); especially within the midgut.
- the basic pH may be a pH greater than 7.5, 8.0, 8.5, 9.0, 9.5, 10.0, 10.5 or 11.0.
- the basic pH may be a basic pH less than 11.0, 10.5, 10.0, 9.5, or 9.0.
- the basic pH may be a pH from 8.0 to 11.0, 8.5 to 11.0, 8.0 to 10.5, 9.0 to 10.0, 9.0 to 9.5, 9.0 to 10.5 or 9.0 to 11.0.
- the composition may be a plant-protecting composition.
- the composition may be for protecting any suitable type of plant (or crop including a plurality of plants).
- the plant may be an embryophyte, especially a spermatophyte, more especially an angiosperm (such as a monocotyledon (or monocot), dicotyledon or eudicotyledon (eudicot)) or a gymnosperm.
- Exemplary monocots include plants of the order: Asparagales (including Amaryllidaceae (such as leek, onion, garlic, shallots and chives) and Asparagaceae (such as asparagus)); Arecales (including Arecaceae (such as palms, for example coconut palm)); Dioscoreales (including Dioscoreaceae (such as yam)); Poales (including Bromeliaceae (such as pineapple) and Poaceae (including corn (maize), wheat, rice, barley, millet, sorghum, oats and bamboo)); and Zingiberales (including Musaceae (including banana) and Zingiberaceae (including ginger and galangal)).
- Asparagales including Amaryllidaceae (such as leek, onion, garlic, shallots and chives) and Asparagaceae (such as asparagus)
- Arecales including Arecaceae (such as palms, for example coconut palm)
- Exemplary eudicots include plants of the order:
- Apiales including Apiaceae (such as parsnip, carrot and celery));
- Asterales including Asteraceae (such as lettuce, artichoke and sunflower)); Brassicales (including Brassicaceae (such as broccoli, cabbage, kale, cauliflower, brussel sprouts, bok choy, choi sum, kohlrabi, radish, turnip and rapeseed) and Capparaceae (such as capers));
- Asteraceae such as lettuce, artichoke and sunflower
- Brassicales including Brassicaceae (such as broccoli, cabbage, kale, cauliflower, brussel sprouts, bok choy, choi sum, kohlrabi, radish, turnip and rapeseed) and Capparaceae (such as capers));
- Caryophyllales including Amaranthaceae (such as spinach, chard and beet) and Polygonaceae (such as rhubarb));
- Cucurbitales including Cucurbitaceae (such as cucumber, squash, pumpkin, rockmelon, honeydew melon, zucchini and watermelon));
- Fabales including Fabaceae (such as various beans, pea, soy bean, mung bean, lentil, peanut and alfalfa (lucerne)));
- Lamiales including Oleaceae (such as olive));
- Malvales including Malvaceae (such as cotton)
- Malvaceae such as cotton
- Myrtales including Myrtaceae (such as guava)
- Myrtaceae such as guava
- Rosales including Cannabaceae (such as hemp), Rosaceae (such as strawberry, apple, pear, apricot, plum, cherry, peach, raspberry, almond, and nectarine) and Moraceae (such as fig));
- Sapindales including Rutaceae (such as citrus, for example orange, lemon, grapefruit, lime and mandarin) and Sapindaceae (such as lychee));
- Solanales including Convolvulaceae (such as sweet potato) and Solanaceae (such as potato, tomato, eggplant, peppers (such as capsicum) and tobacco)); and
- the composition is for protecting commercial agricultural crops.
- crops include cereals, vegetables (including roots and tubers), fruits, pulses, oilcrops and fibre crops.
- Cereals may include corn (maize), rice, wheat, barley, sorghum, millet and oats.
- Vegetables may include broccoli, cauliflower, cabbage, artichokes, capers, kale, spinach, lettuce, bok choy, chard, choi sum, leeks, brussel sprouts, kohlrabi, galangal, ginger, celery, rhubarb, asparagus, bamboo shoots, potatoes, sweet potatoes, yams, soybeans, mung beans, alfalfa, carrots, parsnips, beets, radishes, turnips, onions, shallots and garlic.
- Fruits may include tomatoes, grapes, kiwifruit, berrys (including strawberry s, blueberry s and rasberrys), guava, pears, melons (including rockmelons, watermelons and honeydew melons), citrus (including oranges, mandarins, lemons, limes and grapefruits), stonefruit (including apricots, nectarines, plums, cherries and peaches), lychees, pineapples, figs, apples, bananas, cucumbers, squash, zucchinis, pumpkins, peppers, eggplants and avocados.
- Pulses may include beans, peas and lentils.
- Oilcrops may include crops from which oil may be obtained, such as palms, soybeans, rapeseeds, sunflower seeds, peanuts, cottonseeds, palm kernels, coconuts and olives.
- Fibre crops may include cotton, flax, hemp and bamboo.
- the crop may also be tobacco or a flowering plant.
- the dsRNA may be plant-protecting dsRNA (or crop-protecting dsRNA).
- the plant- protecting double-stranded RNA (dsRNA) may be capable of protecting a plant (especially via RNA interference) against insects.
- the crop -protecting dsRNA may be capable of protecting a crop against insects.
- the dsRNA may be insecticidal dsRNA. Insects may be as described above.
- a specific dsRNA sequence may be selected based on the insect against which protection is sought, and an appropriate sequence may be readily selected by a skilled person.
- RNA nucleotide sequence in order for RNA interference to occur, the RNA nucleotide sequence must match the insect perfectly. Consequently, the dsRNA is likely to be highly specific to the target insect, limiting the possibility of adverse effects on predators to the insect, on the environment or on people at the time of consumption (in the case of vegetables and fruits, for example).
- the term "plant protecting”, “crop protecting” and the like means that the composition/dsRNA is able to prevent or ameliorate the impact of an insect on a plant or crop.
- dsRNA which protects a plant or crop against an insect may kill the insect, adversely affect the insect, or may deter the insect from feeding on the plant or crop.
- the length of the dsRNA may vary depending on the insect(s) against which protection is sought.
- RNases in insects will cleave long dsRNA sequences into much smaller fragments, each of which is typically 20-25 nucleotides in length. Therefore, long dsRNA sequences of, for example, 100 to 3000 base pairs may be used, and these longer sequences would be cleaved into such smaller fragments by the insect after the insect ingests the dsRNA. It is believed that these smaller nucleotide fragments (e.g. 21 nucleotides) are involved in the RNA interference mechanism.
- a single dsRNA construct may be engineered by combining specific sequences from multiple insects or genetic targets which could target multiple organisms or genetic targets (including multiple genetic targets for the same insect), as each insect will cleave the dsRNA sequence into shorter fragments.
- a single dsRNA construct could be used to target three different insects or genetic targets.
- the dsRNA may target at least two insects or genetic targets, more especially from 2 to 10 insects or genetic targets, even more especially from 4 to 8 insects or genetic targets.
- the dsRNA may therefore be from 20 or 21 to 3000 base pairs in length; especially from 21 to 2500, or from 21 to 2000 base pairs in length; more especially from 80 to 1750, from 80 to 1500, or from 80 to 1200 base pairs in length; most especially from 100 to 1200, or from 250 to 1200 base pairs in length.
- use of such longer dsRNA sequences provides a much greater likelihood of the sequence being cleaved to a nucleotide sequence that will match with the desired insect to affect (e.g. kill) the insect.
- the dsRNA may be a plurality of dsRNAs (or two or more dsRNAs). Each dsRNA sequence in said plurality of dsRNAs may have a different genetic target, target a different insect or target a combination of different genetic targets/insects. Consequently, in one embodiment the dsRNA is a plurality of dsRNAs for targeting a plurality of insects or genetic targets.
- the clay complex is able to adsorb dsRNA sequences of a variety of lengths regardless of the sequence.
- the dsRNA targets the electron transport chain (ETC) of an insect, especially the Rieske gene of an insect.
- the dsRNA targets a voltage-dependent channel of an insect, especially a voltage -dependent anionic channel (VDAC) of an insect, more especially a VDAC in the mitochondrial outer membrane of an insect.
- the dsRNA targets the muscles of an insect, especially the Arginine Kinase (AK) gene and SERCA (sarco/endoplasmic reticulum Ca 2+ -ATPase) gene of an insect.
- the AK gene is mainly involved in energy metabolism whereas the SERCA gene is involved in calcium uptake in the endoplasmic reticulum.
- the dsRNA targets a gut of an insect, especially the Glutathione Transferase (GTT) gene of an insect.
- GTT Glutathione Transferase
- the GTT gene is important in the detoxification of compounds.
- the dsRNA targets the body wall and appendages of an insect, especially the Acetylcholinesterase (AchE) gene of an insect.
- AchE Acetylcholinesterase
- the AchE gene is important in growth and development.
- the dsRNA targets an intracellular receptor of an insect, especially the methoprene-tolerant (Met) receptor of an insect.
- the dsRNA targets a GTPase hydrolase enzyme of an insect, especially the Rab4b GTPase of an insect.
- the dsRNA targets a juvenile hormone esterase of an insect.
- the dsRNA targets the mitochondria of an insect, especially the NV2 gene of an insect.
- the NV2 gene plays an important role in the electron transport chain (ETC).
- the dsRNA targets the gut of an insect, especially the foregut of an insect, more especially the prophenoloxidase gene of an insect.
- the prophenoloxidase gene is involved in detoxification of compounds.
- the dsRNA targets the cuticle and epidermis of an insect, especially the cathepsin L gene of an insect.
- the cathepsin L gene plays an important role in the moulting process.
- the dsRNA targets at least one of the group consisting of: the electron transport chain (ETC) of an insect, a voltage-dependent channel of an insect, a muscle of an insect, a gut of an insect, a body wall and/or appendages of an insect, an intracellular receptor of an insect, a GTPase hydrolase enzyme of an insect, a juvenile hormone esterase of an insect, the mitochondria of an insect, and the cuticle and/or epidermis of an insect.
- ETC electron transport chain
- the dsRNA includes a strand (antisense or sense) which is complementary to or at least partly complementary to a sequence as set forth in any one of SEQ ID NOs. 1, 2 and 4-14; more especially SEQ ID NOs. 1 or 2.
- a strand which is "at least partly complementary” means that one strand of the dsRNA has at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, or at least 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% sequence identity with the sequence. It would be appreciated that this definition takes into account that RNA uses a U instead of a T, as found in DNA.
- At least a portion of a strand of the dsRNA is complementary to or at least partly complementary to a sequence as set forth in any one of SEQ ID NOs. 1, 2 and 4-14; more especially SEQ ID NOs. 1 or 2.
- at least a portion of a strand which is "at least partly complementary” means that at least a portion of one strand of the dsRNA has at least 50%, at least 55%, at least 60%, at least 65%, at least 70%, at least 75%, at least 80%, at least 85%, at least 90%, or at least 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98% or 99% sequence identity with the sequence. It would be appreciated that this definition takes into account that RNA uses a U instead of a T, as found in DNA.
- the dsRNA includes or includes at least a portion of a strand (antisense or sense) which is complementary to or at least partly complementary to a fragment of a sequence as set forth in any one of SEQ ID NOs. 1, 2 and 4-14; more especially SEQ ID NOs. 1 or 2.
- a fragment may include at least 5%, 10%, 15%, 20%, 25%, 30%, 35%, 40%, 45%, 50%, 55%, 60%, 65%, 70%, 75%, 80%, 85%, 90% or 95% of a sequence which is complementary to or at least partly complementary to a sequence as set forth in any one of SEQ ID NOs. 1, 2 and 4-14; more especially SEQ ID NOs. 1 or 2.
- the dsRNA may be produced in any suitable way.
- the dsRNA may be produced in vitro via a kit, in vitro or in vivo via a bacteriophage (such as via a Pseudomonas syringae dsRNA bacteriophage), or in vivo using a specialised strain of organism, especially using a bacteria (such as a strain of E. coli).
- a bacteriophage such as via a Pseudomonas syringae dsRNA bacteriophage
- a bacteria such as a strain of E. coli
- in vitro methods are suitable for smaller scale dsRNA production.
- the dsRNA used may be a crude bacterial extract.
- the dsRNA may be in any suitable form and be of any suitable sequence.
- the dsRNA may include any suitable modifications.
- the dsRNA may include one or more modified phosphate groups, modified nucleic acids/nucleotides, modified sugars and/or modified 5 or 3 prime ends.
- Exemplary modified groups which may be present in the dsRNA include, for example, inosine, methylinosine, pseudouridine, morpholine, locked nucleic acids, peptides (such as peptide nucleic acids (PNA)), biotin, cholesterol, fluorophores, radionuclides and metals.
- PNA peptide nucleic acids
- the dsRNA may also be in the form of a dsRNA construct. Such modifications may enhance the stability and/or longevity of the dsRNA.
- the clay complex may include a clay.
- the clay may be an anionic clay.
- the clay may include a plurality of positively charged layers or sheets.
- the clay is a cationic clay.
- the clay may include a plurality of negatively charged layers or sheets.
- the clay may be a silica-based clay.
- the clay may be a swelling clay.
- the clay may be bentonite.
- the clay may include, consist essentially of, or consist of montmorillonite.
- the clay may have a charge density of from 10 to 400 millimolar equivalent charge per 100 g of clay (meq/100 g), especially a charge density of from 20 to 300 meq/100 g, more especially a charge density of from 30 to 250, from 40 to 200, from 50 to 200, from 70 to 150, from 80 to 120, from 90 to 110, or about 100 meq/100 g.
- the clay may include a plurality of clay particles.
- the clay particles may have a z- average value of the particle size of up to 5 ⁇ , more especially up to 1 ⁇ , most especially up to 750 nm or up to 500 nm.
- the clay particles may have a z-average value of the particle size of within the range 20-800 nm, more especially 100-800 nm or 250-650 nm, even more especially about 450 nm.
- the clay includes a plurality of negatively charged layers or sheets a further positively charged component is needed to enable the formation of a composition including both the clay and the dsRNA (as dsRNA carries a negative charge (due to the phosphate groups)).
- the clay complex includes a molecule having a plurality of positively charged groups (or a positively charged molecule), especially in a solution in which the pH is from 5.0 to 7.0.
- the molecule may be for complexing with a cationic clay and with dsRNA.
- the molecule may be adsorbed onto the clay.
- the molecule may be a macromolecule, especially a polymer.
- the molecule may be a dendrimer.
- the polymer may be a co-polymer or a block co-polymer.
- the positive charge in the positively charged groups may be located (or at least partially located) on a nitrogen atom and/or a transition metal; especially a nitrogen atom.
- the positively charged group may be a positively charged amine (including primary, secondary, tertiary, or quarternary amines), an imine (including primary and secondary imines), a guanidine group, or an aromatic amino group.
- exemplary amines include alkylamine, alkylaminoalkyl or alkylamino(alkyl)alkyl (in which each alkyl group may be independently selected from Ci -12 alkyl, especially C 1-6 alkyl, more especially methyl, ethyl, propyl, butyl, pentyl or hexyl); and a nitrogen-containing saturated heterocyclic ring (examples include a nitrogen-containing saturated heterocyclic ring having from 1 to 10 carbon atoms; especially pyrrolidinyl, pyrazolidinyl, piperidinyl, morpholinyl and quinuclidinyl).
- Exemplary imines include an alkylimine and an alkyhminoalkyl (in which each alkyl group may be independently selected from Ci_ 12 alkyl, especially Ci- 6 alkyl, more especially methyl, ethyl, propyl, butyl, pentyl or hexyl).
- An exemplary guanidine group is an alkylguanidino group ((in which the alkyl may be independently selected from C 1-12 alkyl, especially C 1-6 alkyl, more especially methyl, ethyl, propyl, butyl, pentyl or hexyl).
- Exemplary aromatic amino groups may include aromatic nitrogen containing heterocycles; especially aromatic nitrogen containing heterocycles having from 1 to 10 carbon atoms; more especially imidazolyl, triazolyl or purinyl.
- the molecule or positively charged groups may be optionally substituted with at least one (and especially a plurality) of pKa modifying groups, as described below.
- the pKa modifying groups may be geminal or vicinal to the positively charged groups (such as groups including nitrogen atoms) in the molecule.
- alkyl or “alkylene” refers to a straight chain or branched saturated hydrocarbon group.
- the alkyl group may have a specified number of carbon atoms, for example, C 1-12 alkyl refers to alkyl groups having 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 or 12 carbon atoms in a linear or branched arrangement.
- alkyl may be Ci_i 2 lkyl or Ci_ 6 alkyl.
- alkyl groups may include, but are not limited to, methyl, ethyl, propyl (n-propyl and /-propyl), butyl (n-butyl, -butyl and i-butyl), n-pentyl, 2- methylbutyl, 3-methylbutyl, 4-methylbutyl, 2-ethylpropyl, n-hexyl, 2-methylpentyl, 3- methylpentyl, 4-methylpentyl, 2-ethylbutyl, 3-ethylbutyl, heptyl, octyl, nonyl, decyl, undecyl, dodecyl, cyclopentyl, cyclohexyl and cycloheptyl.
- the molecule may be a molecule having a plurality of positively charged groups (or two or more positively charged groups), wherein the groups are selected from one or more of amine, imine, guanido, and aromatic amino groups.
- positively charged groups or two or more positively charged groups
- the terms "positively charged groups”, “positively charged molecule” or the like refer to a group or molecule with a positive charge at pH 5.0 to 7.0.
- the composition may form through electrostatic interactions between, for example, a negatively charged clay, a positively charged molecule, and a negatively charged dsRNA. Consequently, if the positive charge of the positively charged groups in the molecule are neutralised (for example due to the basic pH within the insects' alimentary canal), the composition dissociates, releasing the dsRNA. Therefore, specific molecules having a plurality of positively charged groups may be selected for use with specific insects, and the pKa of the positively charged groups in the molecule can be manipulated or selected to control the release of dsRNA in the insect.
- a composition including a molecule with positively charged groups having a pKa of 9.0 would be expected to release dsRNA in the insects' alimentary canal more quickly and completely than a composition including a molecule with positively charged groups having a pKa of 10.5.
- the pKa of the positively charged groups may be greater than 7.5, 8.0, 8.5, 9.0, 9.5, 10.0, 10.5 or 11.0.
- the pKa of the positively charged groups may be less than 11.0, 10.5, 10.0, 9.5, or 9.0.
- the pKa of the positively charged groups may be from 8.0 to 11.0, 8.5 to 11.0, 8.0 to 10.5, 9.0 to 10.0, 9.0 to 9.5, 9.0 to 10.5 or 9.0 to 11.0.
- the dsRNA may be released from the composition at a pH of greater than 7.5, 8.0, 8.5, 9.0, 9.5, 10.0, 10.5 or 11.0.
- the dsRNA may be released from the composition at a pH of less than 11.0, 10.5, 10.0, 9.5, or 9.0.
- the dsRNA may be released from the composition at a pH of from 8.0 to 11.0, 8.5 to 11.0, 8.0 to 10.5, 9.0 to 10.0, 9.0 to 9.5, 9.0 to 10.5 or 9.0 to 11.0. If the pKa of the positively charged groups is, for example, 9.0, then it would be expected that dsRNA would be released from a composition including a molecule with those positively charged groups at a pH of 9.0.
- the molecule having a plurality of positively charged groups may be of any suitable type.
- the molecule is a polymer.
- the polymer may have a molecular weight of greater than 200, especially greater than 400, more especially greater than 600.
- the polymer may have a molecular weight of from 400 to 100,000, especially from 600 to 80,000.
- the polymer may have a molecular weight of from 10,000 to 50,000; especially from 10,000 to 40,000; most especially about 15,000 or about 33,000.
- the polymer may be a co-polymer or a block co-polymer formed with at least one monomer providing at least one positively charged group.
- the polymer may also be a homopolymer, formed by only one monomer providing at least one positively charged group.
- the polymer may have a plurality of positively charged nitrogen atoms (the positively charged groups may be positively charged nitrogen atoms).
- the pKa of the nitrogen atoms may be as described above for the positively charged groups.
- the polymer may be a branched or linear polymer.
- the polymer may be or include an optionally substituted polyalkyleneamine (may be known as polyalkyleneimine).
- An exemplary polyalkyleneamine may be polyhexyleneamine (may be known as polyhexyleneimine), polypentyleneamine (may be known as polypentyleneimine), polybutyleneamine (may be known as polybutyleneimine), polypropyleneamine (may be known as polypropyleneimine) or polyethyleneamine (may be known as polyethyleneimine); especially polyethyleneamine.
- Polyethyleneamine includes amino groups having pKa values from 10.5 to 11.0 and thus would be expected to release dsRNA at a pH of about or greater than 10.5.
- the optional substituents for the polyalkyleneamine may be pKa modifying groups or a plurality of pKa modifying groups.
- the polymer may be a polyalkyleneamine substituted by a plurality of pKa modifying groups.
- the pKa modifying groups may be electron withdrawing groups or electron donating groups.
- the pKa modifying groups may be geminal or vicinal to the amine groups in the polymer.
- Exemplary electron withdrawing groups may include carbonyl-containing groups (such as esters (including -CO-O-alkyl groups) and carboxylic acids (including a -CO-OH group)), nitro groups, cyano groups, protonated amino groups (such as a tetra-alkyl substituted nitrogen) and sulfate groups.
- carbonyl-containing groups such as esters (including -CO-O-alkyl groups) and carboxylic acids (including a -CO-OH group)
- nitro groups such as esters (including -CO-O-alkyl groups) and carboxylic acids (including a -CO-OH group)
- nitro groups such as esters (including -CO-O-alkyl groups) and carboxylic acids (including a -CO-OH group)
- nitro groups such as esters (including -CO-O-alkyl groups) and carboxylic acids (including a -CO-OH group)
- nitro groups such as esters (including
- the pKa modifying groups may also include -alkyl, -OH, ethers (including -O-alkyl groups), and amines (including -NH- alkyl and -N(alkyl)-alkyl groups), in which the alkyl groups may be optionally substituted with one or more of -OH, -O-alkyl, -halo (including -F, -CI, -Br of -I), -CO-alkyl, -CO-O-alkyl, -O- CO-alkyl, -NH-alkyl, -N(alkyl) 2 , -CO-NH-alkyl and -NH-CO-alkyl.
- the polymer is a polyalkyleneamine substituted with pKa modifying groups geminal or vicinal to the amine groups in the polymer.
- the polymer may be a polyalkyleneamine substituted with hydroxyl groups or -O-alkyl groups vicinal to the amine groups in the polymer.
- the polymer may be ethoxylated polyethyleneamine.
- Ethoxylated polyethyleneamine includes amino groups having pKa values of about 9.0 - 9.5.
- a polyalkyleneamine may include either or both of amine and imine groups.
- ethoxylated polyethyleneamine may include one or more of the following units: - NH(CH 2 CH 2 OH), -N(CH 2 CH 2 OH) 2 , and -N(CH 2 CH 2 OH)-.
- the polymer may be polyalkylene-based; especially polyhexylene-based, polypentylene-based, polybutylene -based, polypropylene-based or polyethylene-based; most especially polyethylene-based.
- the polyalkylene-based polymer may include a positively charged group geminal or vicinal to a pKa modifying group (especially an electron withdrawing group).
- the alkylene group (especially an ethylene group) in the polyalkylene-based polymer may be substituted by an amino group, and optionally vicinal to the amino group is an electron withdrawing group.
- the polymer may be polyethylene -based, wherein the ethylene group in the polyethylene -based polymer is substituted by an amino group and optionally substituted by an electron withdrawing group vicinal to the amino group.
- the amino group may be a dialkylamino group; more especially a diethylamino or dimethylamino group; most especially a dimethylamino group.
- the electron withdrawing group may be an alkyleneester (-R-COO-), alkyleneether (-R-0-) or alkylene-carbonyl (-R-CO-); more especially an ethylene-CO-O- group).
- the electron withdrawing group may be derived from a methacrylate.
- the polymer may be or include a polydialkylaminoalkylmethacrylate.
- the polymer may be poly(2-dimethylaminoethyl methacrylate) (or pDMAEMA).
- pDMAEMA includes alkylated amino groups having pKa values of about 7.0-7.5.
- the polymer may be poly(2-(diethylamino)ethyl methacrylate) (or pDEAEMA).
- pDEAEMA has similar pKa values to pDMAEMA.
- the polymer may be a homopolymer, co-polymer or block co-polymer including a dialkylaminoalkylmethacrylate (such as a 2-(dimethylamino)ethyl methacrylate or DMAEMA).
- the co-polymer or block co-polymer including a dialkylaminoalkylmethacrylate may also include a second dialkylaminoalkylmethacrylate, a polyalkyleneoxide (such as polyethyleneoxide or PEO), or a polyalkylacrylamide (such as poly(N-isopropylacrylamide) or ⁇ ).
- Exemplary co-polymers or block co-polymers include pDMAEMA-pDEAEMA, pDMAEMA-PEO, and pDMAEMA-PNIPAM.
- the pKa of the amino group may vary, allowing the dsRNA to be released at different pHs.
- the composition may include up to 40 wt% dsRNA, especially up to 30 wt% dsRNA, more especially up to 25 wt% or 20 wt% dsRNA.
- the composition may include more than 0.5 wt% dsRNA; especially more than 1 wt% dsRNA, 2 wt% dsRNA, 3 wt dsRNA, 4 wt% dsRNA or 7 wt% dsRNA; more especially more than 5 wt% dsRNA.
- the composition may include from 0.5 to 30 wt% dsRNA, from 1 to 30 wt% dsRNA, from 5 to 30 wt% dsRNA or from 5 to 20 wt% dsRNA; more especially from 5 to 25 wt% dsRNA or from 7 to 25 wt% dsRNA; most especially about 8 to 25 wt% dsRNA.
- the N:P ratio in the composition i.e. the nitrogens in the molecule (N):the phosphorous in the dsRNA(P)
- N:P ratio in the composition may be at least 1, 2, or 3, especially at least 4, more especially at least 5.
- the N:P ratio in the composition may be less than 30, less than 20, less than 10, or less than 7; especially less than 6.
- the N:P ratio in the composition may be from 3-7, especially from 4-6, more especially about 5.
- the mass ratio of clay : molecule/dsRNA may be from 1:1 to 10: 1, especially from 3:1 to 8:1, more especially from 4:1 to 7: 1 or 5:1 to 7: 1, most especially about 6:1 or about 5: 1.
- the mass ratio of clay : molecule : dsRNA may be about 5:1:2.
- the loading ratio of different components in the composition may affect the release of dsRNA.
- a composition including a higher proportion of positively charged groups would be expected to release dsRNA more slowly than a composition including a lower proportion of positively charged groups (as the base has a greater amount of positive charges to neutralise).
- the composition has a z-average value of particle size of up to 5000 nm, especially up to 3000 nm, more especially of up to 2500 nm.
- the composition has a z-average value of particle size of at least 50 nm, 100 nm, 250 nm or 500 nm, especially at least 1000 nm, more especially at least 1500 nm, most especially at least 2000 nm.
- the composition has a z-average value of particle size of about 2100 nm.
- the composition may have a z-average value of particle size of from 50 nm to 5 ⁇ , especially from 100 nm to 1 ⁇ .
- the ideal particle size of the composition may vary depending on the food to which the composition is to be applied.
- the composition has a positive zeta potential, especially a zeta potential of greater than 0.5 mV. In another embodiment, the composition has a zeta potential of less than 25 mV, especially less than 15 mV, more especially less than 10 mV, even more especially less than 5 mV. In a further embodiment, the composition has a zeta potential of about 1.3 mV.
- the term "dsRNA adsorbed onto a clay complex” and the like includes circumstances in which dsRNA is adsorbed onto the surface of the clay complex, circumstances in which dsRNA is intercalated between clay complex layers, and circumstances in which dsRNA is adsorbed onto the molecule having a plurality of positively charged groups where the dsRN A/molecule is adsorbed on the surface of a clay or between clay layers. Therefore, the term “adsorbed” includes both adsorption onto the surface of the clay or clay complex, as well as intercalation between clay or clay complex layers.
- the dsRNA when dsRNA is adsorbed onto the clay complex, the dsRNA substantially does not degrade, even when stored for more than 60 days.
- the clay complex advantageously protects the dsRNA against RNase and UV light.
- the present invention relates to a preparation including the composition of the first aspect of the present invention.
- Context permitting, features of the second aspect of the present invention may be as described for the first aspect of the present invention.
- the preparation may include one composition of the first aspect of the present invention, or a plurality of compositions of the first aspect of the present invention.
- a user may be provided multiple compositions (for example in solid or powder form) which each target one insect pest. If the user wishes to target three insect pests when spraying a crop, for example, the user may mix three compositions and a fluid to prepare a single preparation for spraying.
- the preparation may be in any suitable form.
- the preparation may be in the form of a solid, ointment, gel, cream, powder, paste, suspension, colloid, foam or aerosol; especially a suspension or a colloid.
- Solid forms of the preparation may include dusts, powders, granules, pellets, pills, pastilles, tablets, filled films (including seed coatings) and the like, which may be water-dispersible ("wettable").
- the preparation is in the form of a concentrate, especially a concentrate in the form of a colloid or suspension.
- the preparation is heterogeneous, especially comprising a solid phase dispersed within a fluid phase.
- the solid phase may comprise the composition.
- the fluid phase may be, for example, a liquid, a gas, or a free flowing solid, or a combination thereof; especially a liquid; more especially an aqueous liquid; most especially water.
- the water may be sterile or non-sterile.
- the solid-phase may be dispersed within the fluid phase in any suitable way. This will depend upon the nature of the solid-phase and the fluid-phase.
- the preparation may include a variety of other agents.
- agents include, but are not limited to, one or more of the following types of ingredients: diluents, carriers, excipients, suspension agents, agglomeration agents, bases, buffers, bittering agents, fragrances, preservatives, propellants, thixotropic agents, surfactants, anti-freezing agents, and colouring agents.
- Suitable agents may be selected by a skilled person.
- the preparation may also include one or more other active ingredients.
- An active ingredient as defined herein, is an ingredient that provides benefit to plant protection.
- the active ingredient may be, for example, an insecticide, a pesticide, a fungicide, an antibiotic, an insect attractant, an anti-parasitic agent, an anti-viral agent, or a nematicide.
- the preparation when in the form of a colloid or suspension, it may include the composition at up to 30% w/w, up to 20% w/w, up to 10% w/w, up to 5% w/w, up to 2% w/w, up to 1% w/w, less than 1% w/w, less than 0.1% (less than 1 mg/ml) or less than 0.01% w/w (less than 0.1 mg/ml).
- the preparation may be in a concentrated form which requires dilution prior to application to an insect food, plant or crop.
- the preparation for application to an insect food, plant or crop may include the composition at less than 1 %w/w, less than 0.1% (less than 1 mg/ml) or less than 0.01% w/w (less than 0.1 mg/ml).
- the preparation when in the form of a colloid or suspension, it may include the composition at up to 100 mg/L; especially up to 50 mg/L; more especially up to 20 mg/L or up to 10 mg/L; most especially less than 10 mg/L.
- the concentration of the composition in a colloid or suspension is from 1-100 mg/L.
- the preparation may be formulated for administration to a plant, or to any part of a plant, in any suitable way.
- the preparation may be formulated for administration to the leaves, stem, roots, fruit, vegetables, grains and/or pulses of the plant.
- the preparation is formulated for administration to the leaves of the plant, and is especially sprayable onto the leaves of the plant.
- the preparation may be sprayable onto the plant.
- the preparation may be administered to the plant as a metered dose.
- the preparation may be formulated for administration to the plant, for example, by spraying, by brush or by another applicator.
- the preparation may be formulated for administration to the plant by spraying (including via a fine mist), drip-feeding and/or irrigation.
- the preparation may be in the form of a suspension, in which case the composition may be sprayable onto the plant.
- the suspension may be substantially stable.
- a “substantially stable" suspension is a suspension in which, once formed, the solid phase remains sufficiently dispersed (i.e. does not significantly aggregate) in the fluid phase (especially a liquid phase, more especially water) for the suspension to be sprayed onto a plant.
- the solid phase remains dispersed in the fluid phase for at least 24 hours after the suspension is formed, especially at least 5 days after the suspension is formed, more especially at least 10, 15, 20 or 30 days after the suspension is formed, most especially at least 60 days after the suspension is formed.
- the suspension is not substantially stable, then the solid phase may aggregate leading to blockages in equipment when the suspension is sprayed onto plants, or alternatively leading to variable amounts of solid phase material being applied in a given area, resulting in incomplete protection for plants.
- the present invention provides a method of preparing the composition of the first aspect of the present invention.
- the method may include the step of adsorbing dsRNA onto a clay complex.
- the method may include the steps of: adsorbing a molecule having a plurality of positively charged groups onto a clay to form a clay complex; and adsorbing dsRNA onto the clay complex.
- the method may include the steps of adsorbing dsRNA onto a molecule having a plurality of positively charged groups; and adsorbing the dsRN A/molecule onto a clay.
- the molecule has a plurality of positively charged nitrogen groups.
- the N:P ratio i.e. the nitrogens in the molecule (N):the phosphorous in the dsRNA(P)
- the N:P ratio may be at least 1, 2 or 3, especially at least 4, more especially at least 5.
- the N:P ratio may be less than 30, less than 20, less than 10, or less than 7, especially less than 6.
- the N:P ratio may be from 3-7, especially from 4-6, more especially about 5.
- the step of adsorbing dsRNA onto the molecule may include contacting or incubating the dsRNA with the molecule in an aqueous solution with shaking or inversion. This step may be performed below 25 °C, especially below 15 °C, more especially below 10 °C, most especially below 5 °C. This step may be performed on ice. This step may be performed at about pH 7.
- the step of adsorbing the dsRN A/molecule onto a clay may include contacting or incubating the dsRNA/molecule with the clay in an aqueous solution with shaking or inversion. This step may be performed below 25 °C, especially below 15 °C, more especially below 10 °C, most especially below 5 °C. This step may be performed on ice. This step may be performed at about pH 7.
- the composition formed by the method includes a clay, a molecule having a plurality of positively charged groups, and dsRNA.
- the mass ratio of clay : molecule/dsRNA may be from 1:1 to 10: 1, especially from 3: 1 to 8:1, more especially from 4: 1 to 7: 1 or from 5: 1 to 7:1, most especially about 6: 1 or about 5:1.
- the present invention relates to a method of delivering dsRNA to an insect having a basic pH within its alimentary canal, the method comprising administering (or applying) the composition of the first aspect or the preparation of the second aspect of the present invention to an insect food.
- the composition may be administered to any insect food.
- Such foods may include plants and plant parts (including fruits and vegetables, for example), but also may include synthetic insect food sources, insect baits or water traps.
- the insect food is a plant (including parts of plants).
- the insect may ingest the composition while ingesting the food.
- the step of administering the composition to an insect food may involve spraying, dripping or pouring the composition or preparation onto the food, or brushing the composition or preparation onto the food.
- the present invention relates to a method of protecting a crop against an insect having a basic pH within its alimentary canal, the method comprising the step of administering (or applying) to a crop the composition of the first aspect or the preparation of the second aspect of the present invention.
- the crop may include a plurality of plants as defined above.
- the step of administering the composition or preparation to the crop may involve administering the preparation or composition to the leaves, stem, roots, fruit, vegetables, grains and/or pulses of the plants within the crop.
- the step may involve spraying the composition or preparation onto the crop, especially onto the leaves of the plants in the crop.
- the step may involve brushing the composition or preparation onto the crop, especially onto the leaves of the plants within the crop.
- the step may involve administering the composition or preparation to the crop by spraying, drip-feeding or irrigation.
- the dsRNA is insecticidal dsRNA.
- the composition is an insecticidal composition.
- the present invention provides the composition of the first aspect, or a preparation of the second aspect, when applied to a plant.
- Features of the sixth aspect may be as described above for the first and second aspects.
- the composition or preparation once applied to a plant or crop, is capable of protecting the plant or crop for at least 15 days, especially at least 20 days, more especially at least 25 days, most especially at least 30 days.
- the composition once administered to a plant or crop, is capable of protecting the plant or crop for from 2 to 8 weeks, especially from 3 to 6 weeks, most especially from 4 to 5 weeks.
- the composition may degrade at a rate of 10-30% per week, especially 15-25% per week, more especially at a rate of 15-20% per week.
- the duration of protection may be affected, for example, by the amount of rainfall on the plant or crop.
- the composition may also be administered to the plant or insect food at any suitable concentration, and advantageously the dsRNA in the composition may be effective at relatively low concentrations. In one embodiment, less than 100 ⁇ g of dsRNA per plant may be administered, especially less than 50 ⁇ g, more especially less than 40, 30, 20, 10 or 5 ⁇ g, most especially less than 1 ⁇ g or 0.5 ⁇ g of dsRNA per plant.
- compositions When the composition is administered to the leaf of the plant, less than 100 ⁇ g of dsRNA per leaf may be administered to the plant, especially less than 50 ⁇ g, more especially less than 40, 30, 20, 10 or 5 ⁇ g, most especially less than 1 ⁇ g or 0.5 ⁇ g or 0.1 ⁇ g of dsRNA per leaf is administered to the plant.
- composition or preparation may include an effective amount of dsRNA.
- effective amount means that a sufficient quantity of dsRNA is administered so as to affect the targeted insect.
- the present invention provides dsRNA adsorbed onto a molecule having a plurality of positively charged groups.
- Features of the seventh aspect of the present invention may be as described for the first aspect of the present invention.
- the present invention provides a molecule having a plurality of positively charged groups adsorbed onto a clay.
- Features of the eighth aspect of the present invention may be as described for the first aspect of the present invention.
- the present invention provides a method of preparing the preparation of the second aspect of the present invention.
- This method may include the step of mixing the composition of the first aspect of the present invention with a fluid, such as a liquid, especially an aqueous liquid.
- the method may also include the step of mixing the composition with one or more other active agents or other agents, as defined in the second aspect of the present invention.
- Features of the ninth aspect of the present invention may be as described for the second aspect of the present invention.
- the present invention provides double- stranded RNA adsorbed onto a clay complex.
- Features of the tenth aspect of the present invention may be as described for the first aspect of the present invention.
- the present invention provides a kit comprising:
- a clay complex (or a clay and a molecule having a plurality of positively charged groups);
- the clay complex (or the clay and the molecule having a plurality of positively charged groups) and/or the double-stranded RNA is provided in solid or liquid (especially aqueous) form.
- the clay complex (or the clay and the molecule having a plurality of positively charged groups) and/or the dsRNA may, depending on their form, include a variety of other agents.
- Exemplary agents include, but are not limited to, one or more of the following types of ingredients: diluents, carriers, excipients, suspension agents, agglomeration agents, bases, buffers, bittering agents, fragrances, preservatives, propellants, surfactants, thixotropic agents, anti-freezing agents, and colouring agents. Suitable agents may be selected by a skilled person.
- the kit may also include one or more other active ingredients.
- An active ingredient as defined herein, is an ingredient that provides benefit to a plant.
- the active ingredient may be, for example, an insecticide, a pesticide, a fungicide, an antibiotic, an insect attractant, an anti- paracitic agent, an anti- viral agent, or a nematicide.
- the present invention provides a composition comprising dsRNA adsorbed onto a clay complex, and wherein the clay complex includes positively charged groups having a pKa of greater than 7.5.
- the twelfth aspect may be as described above for the first aspect of the present invention.
- the present invention provides a composition comprising a clay complex and a negatively charged active agent.
- the negatively charged active agent may be dsRNA or a chemical agent (including insecticides).
- Features of the thirteenth aspect of the present invention may be as described for the first aspect of the present invention.
- the present invention provides a method of adversely affecting an insect or insect population, the method comprising the step of administering the composition of the first or thirteenth aspect of the present invention to the insect or insect population.
- the step of administering the composition may include administering (or applying) the composition to an insect food for consumption by the insect or insect population (or individuals within that population).
- Features of the fourteenth aspect of the present invention may be as described above for the first aspect of the present invention.
- the insect food may be as described for the fourth aspect of the present invention.
- Any of the features described herein can be combined in any combination with any one or more of the other features described herein within the scope of the invention.
- Figure 1A provides a gel retardation image of bentonite - polyethyleneimine - dsRNA compositions (BEN-PEI-dsRNA) at different dsRNA:BEN-PEI loading ratios, in which the polyethyleneimine (PEI) has a molecular weight of 60,000;
- Figure IB provides a gel retardation image of bentonite - polyethyleneimine - dsRNA compositions (BEN-PEI-dsRNA) at different dsRNA:BEN-PEI loading ratios, in which the polyethyleneimine (PEI) has a molecular weight of 800;
- Figure 2A provides a gel retardation image of dsRNA release from bentonite - polyethyleneimine - dsRNA compositions (BEN-PEI-dsRNA) at various pH, in which the polyethyleneimine (PEI) has a molecular weight of 60,000;
- Figure 2B provides a gel retardation image of dsRNA release from bentonite - polyethyleneimine - dsRNA compositions (BEN-PEI-dsRNA) at various pH, in which the polyethyleneimine (PEI) has a molecular weight of 800;
- Figure 3 provides a gel electrophoresis image of dsRNA-etPEI complexes with N:P ratios of 1, 2, 3, 4 and 5 (N: amine in PEI and P: phosphate in dsRNA);
- Figure 4A provides a gel electrophoresis image of dsRNA release from a dsRNA- etPEI complex, with an N/P ratio of 3 (i.e. NP3; N: amine in PEI and P: phosphate in dsRNA);
- Figure 4B provides a gel electrophoresis image of dsRNA release from a dsRNA- etPEI complex, with an N/P ratio of 4 (i.e. NP4; N: amine in PEI and P: phosphate in dsRNA);
- Figure 5 illustrates the change in pH of a etPEI solution as increasing volumes of NaOH is added
- Figure 6A provides a gel electrophoresis image in which the presence of free dsRNA is investigated in a Bentonite - etPEI - dsRNA complex with a N:P ratio of 3 (N: amine in PEI and P: phosphate in dsRNA; denoted BReP3) at pH 8.0 and 8.5;
- Figure 6B provides a gel electrophoresis image in which the presence of free dsRNA is investigated in a Bentonite - etPEI - dsRNA complex with N:P ratios of 4 and 5 (N: amine in PEI and P: phosphate in dsRNA; denoted BReP4 and BReP5) at pH 8.0 and 8.5;
- Figure 7 provides a gel electrophoresis image showing the pH dependent release profile of dsRNA from BReP4;
- Figure 8 provides a gel electrophoresis image showing the pH dependent release profile of dsRNA from BReP5;
- Figure 9 provides a gel electrophoresis image showing the pH dependent release profile of dsRNA from BReP6;
- Figure 10A is a scanning electron microscope image of bentonite
- Figure 10B is a scanning electron microscope image of BEN-etPEI
- Figure 11 illustrates the particle size distribution of bentonite, etPEI, etPEI-dsRNA complex, and BEN-etPEI-dsRNA;
- Figure 12 is a gel electrophoresis image illustrating the nuclease protection of dsRNA in BReP5 in a high salt Nuclease A bioassay
- Figure 13 is a photograph illustrating the mortality of H. armigera fed with DEPC water, BEN-etPEI, naked Rieske dsRNA and BReP5. Dead larvae was indicated by red arrows;
- Figure 14 provides statistical data for the effect at day 12 of ingestion by larvae of Nicotiana tabacum leaves coated with DEPC water, BEN-etPEI, naked Rieske dsRNA and BReP5;
- Figure 15 provides a gel electrophoresis image of dsRNA - pDMAEMA complexes with N:P ratios of 1/2, 1, 2, and 3 (N: amine in pDMAEMA and P: phosphate in dsRNA), in which pDMAEMA has molecular weight of 33, 000;
- Figure 16 provides a gel retardation image of dsRNA release from bentonite - pDMAEMA - dsRNA (BPR) complex with an N/P ratio of 1 (i.e. NP1, N: amine in pDMAEMA and P: phosphate in dsRNA) and a mass ratio of bentonite:pDMAEMA of 5: 1 (i.e. BPR5), in which pDMAEMA has molecular weight of 33, 000;
- Figure 17 is a gel electrophoresis image illustrating the nuclease protection of dsRNA in BPR5 in a low salt Nuclease A bioassay;
- Figure 18 is a graph of relative transcript levels of VDAC in Helicoverpa armigera larvae continuously fed for 3 days (once a day) on GFP dsRNA (as control), bentonite- pDMAEMA (BP), VDAC dsRNA, and bentonite-pDMAEMA-VDAC (BP VDAC). The data are presented as means + SD; and
- Figure 19 is a graph of relative transcript levels of Rieske in Helicoverpa armigera larvae continuously fed for 3 days (once a day) on GFP dsRNA (as control), bentonite- pDMAEMA (BP), Rieske dsRNA and bentonite-pDMAEMA-Rieske (BP Rie). The data are presented as means + SD.
- Targets for the composition of the present invention or dsRNA gene sequences for use in the composition of the present invention include (unless otherwise stated, the sequences below are intended to target Helicoverpa armigera):
- Rieske gene expresses an iron sulphur cluster involved in the electron transport chain (ETC) which when targeted by RNAi causes mortality in insects.
- ETC electron transport chain
- the cDNA sequence used for the Rieske gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 1 below (300bp):
- VDAC Voltage-Dependent Anionic Channels
- Green Fluorescent Protein (GFP) - GFP was used as a negative control in some experiments.
- the cDNA sequence used for GFP (which corresponds to the RNA sequence) is provided in SEQ ID NO. 3 below (339bp):
- Arginine Kinase (AK) gene - targeting the AK gene may affect the muscles of an insect.
- the AK gene is mainly involved in energy metabolism.
- the cDNA sequence for the AK gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 4 below (200bp):
- GTT Glutathione Transferase
- the GTT gene is important in the detoxification of compounds.
- the cDNA sequence for the Glutathione S -transferase gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 6 below (300bp):
- Acetylcholinesterase (AchE) gene - targeting the AchE gene may affect the body wall and appendages of an insect.
- the AchE gene is important in growth and development.
- the cDNA sequence for the AchE gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 7 below (310bp):
- Methoprene-tolerant (Met) receptor gene the Met receptor is an intracellular receptor in the insect.
- the cDNA sequence for the Met receptor gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 9 below (375bp):
- Rab4b GTPase gene - Rab4b GTPase is a GTPase hydrolase enzyme.
- the cDNA sequence for the Rab4b GTPase gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 10 below (313bp):
- Prophenoloxidase gene - targeting the prophenoloxidase gene may affect the foregut of an insect.
- the prophenoloxidase gene is involved in detoxification of compounds.
- the cDNA sequence for the prophenoloxidase gene (prophenoloxidase subunit 2) (which corresponds to the RNA sequence) is provided in SEQ ID NO. 11 below (242bp):
- Cathepsin L gene - targeting the cathepsin L gene may affect the cuticle and epidermis of an insect.
- the cathepsin L gene plays an important role in the moulting process.
- the cDNA sequence for the cathepsin L gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 12 below (280bp):
- NV2 gene - targeting the NV2 gene may affect the mitochondria of an insect.
- the NV2 gene plays an important role in the electron transport chain (ETC).
- ETC electron transport chain
- cDNA sequence for the NV2-2 gene (which corresponds to the RNA sequence) is provided in SEQ ID NO. 14 (255bp) below:
- dsRNA Double Stranded RNA
- the Rieske gene sequence was cloned into pGEM-T-Easy vector, sequenced and used for in vitro dsRNA synthesis.
- the T7 promoter sequences were added to gene specific primers (provided below).
- the T7 DNA template (300 bp) for dsRNA synthesis was synthesised using PCR.
- the dsRNA synthesis was performed using MEGAscript T7 Transcription Kit and purified by Trizol extraction protocol.
- the dsRNA concentration was analysed using NanoDrop 1000 and integrity was checked by agarose gel electrophoresis (1%).
- the primer sequences used were as follows (T7 sequence underlined):
- SEQ ID NO. 15 TAATACGACTCACTATAGGGAGTCGGGGTAGCTGATGTCG
- SEQ ID NO. 16 TAATACGACTCACTATAGGGAGGCAAGTTCATCGGTGGTT
- the Rieske and VDAC sequences were also synthesised by an in vitro transcription method by AgroRNA company (Seoul, South Korea).
- the Rieske sequence is 300 bp (conserved region of sequence) and the VDAC sequence is 232 bp (conserved region of sequence), as outlined above.
- bentonite - polyethyleneimine (BEN-PEI) was prepared first by mixing dispersed bentonite in excess PEI solution overnight (-16 hrs) followed by washing away of excess PEI and dispersing the collected BEN-PEI.
- dsRNA was mixed with the dispersed BEN- PEI at varied dsRNA:BEN-PEI mass ratios, which was subjected to the gel test to determine the best loading ratio of dsRNA and BEN-PEI.
- Polyethyleneimine (PEI) was purchased from Sigma Aldrich, and had a molecular weight of 60,000 and 800.
- BEN-PEI was prepared, using PEI with both a molecular weight of 60,000 and a molecular weight of 800.
- bentonite saturated Cation Exchange Capacity (CEC) was 100 meq/lOOg
- CEC Composed Cation Exchange Capacity
- 0.5 g of a 50% PEI solution was dispersed in 10 mL deionized water and the pH was adjusted to 6-7 using 1.0 M HC1 while stirring. While vigorously stirring, the dispersed PEI solution was then added dropwise into the bentonite solution. The bentonite PEI solution was stirred overnight at 50 °C.
- BEN-PEI bentonite - polyethyleneimine
- the mass concentration was 11.7 mg/ml for BEN-PEI (60,000 molecular weight) and 8.3 mg/ml for BEN-PEI (800 molecular weight). Mass concentration was determined by centrifugation (4,000 rpm, 20 min) of 10 mL sonicated bentonite or bentonite-PEI (BEN-PEI) suspension. Resulting supernatant was discarded and the pellet vacuum-dried (2 hrs), followed by air-drying (16 hrs). The dried pellet was weighed for calculation of the mass concentration. dsRNA Loading onto BEN-PEI
- the mass loading ratio i.e. the ratio of complete dsRNA binding with Ben-PEI was determined by mixing 500 ng MEGAscript control dsRNA (500 bp) with BEN-PEI (60,000 and 800 molecular weight) at mass ratios of 1:1, 1:10, and 1:20 up to 1:140 and 1:150. The resulting mixtures were subjected to orbital shaking (20 min) followed by gel electrophoresis (1.0%).
- pH release testing was performed by preparing BEN-PEI-dsRNA solutions at the mass ratio with complete dsRNA association (as discussed in the preceding paragraph: 1 : 100 for BEN-PEI-dsRNA (in which PEI has a molecular weight of 60,000) and 1 : 120 for BEN-PEI- dsRNA (in which PEI has a molecular weight of 800)).
- the resulting suspensions were centrifuged at 13,000 rpm for 15 min and the supernatant electrophoresed (1.0%) to check for the absence of free dsRNA before discarding the supernatant.
- the pellets were resuspended in 20 aqueous solutions ranging from pH 2-12.5, and orbital shaken for 30 min. Gel electrophoresis (1.0%) was then used to examine the release of dsRNA from the BEN-PEI-dsRNA composition, and the results are provided in Figure 2.
- the dsRNA release was pH dependent and was substantially released from the compositions at pH 11. However, the pH in the final mixed solution would be lower than the initial value. This means that dsRNA release would start at a pH lower than 11.0 but higher than 10.5.
- PEI 80% ethoxylated branched polyethyleneimine
- etPEI 80% -ethoxylated branched PEI
- Rieske dsRNA 500 ng, insect specific gene, 300 bp, 1.1 ⁇ g/uL was added to etPEI solutions with N:P ratios (N: amine in PEI and P: phosphate in dsRNA) of 1, 2, 3, 4, 5, 10 and 20 (denoted NP1, NP2, NP3, NP4, NP5, NP10 and NP20 herein). The mixtures were then incubated on ice for 15 minutes with gradual mixing by inversion. Gel electrophoresis was used to examine if there is free dsRNA in the dsRNA-etPEI mixed solutions, and these results are provided in Figure 3.
- NP3 and NP4 (dsRNA-etPEI) solutions were prepared, and then mixed in the same volume of buffer.
- the buffer solutions had a pH of from 8.0 to 10.5.
- the mixtures were shaken for 30 minutes, and then gel electrophoresis was used to examine the release of dsRNA from the dsRNA-etPEI complexes.
- the results are provided in Figures 4A (for NP3) and 4B (for NP4).
- etPEI 80% ethoxylated branched polyethyleneimine
- solutions of 0.1 mol/L HC1, etPEI, and NaOH were prepared.
- 10 mL 0.1 mol/L HC1 and 10 mL 0.1 mol/L etPEI were mixed, and the pH recorded.
- To the etPEI solution was added 0.5 mL 0.1 mol/L NaOH while stirring and the pH recorded; this step was repeated until the pH began to increase sharply.
- the previous two steps were then repeated until the pH of the solution was 11-11.5.
- the results are provided in Figure 5. This illustrates that etPEI has a pKa of about 9.0-9.5.
- BEN bentonite
- bentonite 0.5 g was dispersed in 100 mL deionised water via stirring for 5 minutes, and this suspension was then diluted to a final mass concentration of 5 ⁇ g ⁇ L.
- dsRNA-etPEI mixtures at a N:P ratio of 3, 4 and 5 i.e. NP3, NP4 and NP5 were prepared as described above.
- the bentonite suspension was mixed with the dsRNA-etPEI mixtures (NP3, NP4 and NP5) at a bentonite:etPEI mass ratio of 6:1 to form BEN-etPEI-dsRNA complexes (at NP3, NP4 and NP5 - i.e. BReP3, BReP4 and BReP5).
- the mixtures were incubated on ice for 15 minutes with gradual mixing by inversion and then gel electrophoresis was used to examine for the presence of free dsRNA.
- BReP4 and BReP5 suspensions were prepared, as described above. The suspensions were then mixed with the same volume of buffer. The buffer solutions had a pH from 8.5 to 10.0. The mixtures were shaken for 30 minutes, and then gel electrophoresis was used to examine the release of dsRNA from the BReP4 and BReP5 complexes. The results are provided in Figures 6 and 7.
- BReP6 was also prepared to test the pH dependent release behaviour.
- BReP6 was as prepared above for BReP4 and BReP5, except that the N:P ratio (N: amine in etPEI and P: phosphate in dsRNA) in the etPEI -dsRNA was 6 (i.e. NP6).
- N:P ratio N: amine in etPEI and P: phosphate in dsRNA
- NP6 dsRNA-etPEI
- BReP4, BReP5 and BReP6 were able to carry a large amount of dsRNA.
- the mass ratio BEN:dsRNA:etPEI was 6:1.41:1, 6: 1.05:1, 6:0.84:1, and 6:0.70:1 for BReP3, BReP4, BReP5 and BReP6, respectively.
- the dsRNA wt% was 16.7%, 13.0%, 10.7% and 9% in BReP4, BReP5, and BReP6, respectively.
- dsRNA in BReP5 and BReP6 were almost completely associated with BEN-etPEI to form BEN-dsRNA-etPEI complexes, which were stable at pH 6-9, without any obvious release of loaded dsRNA.
- dsRNA started to release at pH 9.5 and 10.0, for BReP5 and BReP6, respectively.
- the release of dsRNA started at pH 8.5-9.0, and completed at pH 10.0.
- Rieske dsRNA 500 ng was loaded on etPEI at a N:P ratios (N: amine in PEI and P: phosphate in dsRNA) of 5 (NP5), as mentioned above.
- NP5 complexes were then loaded on bentonite at mass ratio of 1 :6 to make BReP5.
- the final volume of the mixture was adjusted to 10 ⁇ using diethylpyrocarbonate (DEPC) water. High salt Nuclease A (2 ⁇ ) was added and the mixture incubated at 37 °C for 20 minutes.
- Neonates of Helicoverpa armigera were fed on artificial diet for 4 days and were subsequently used in leaf feeding assay. The larvae were reared under controlled conditions of 27 + 2 °C, 65 ⁇ 5 % relative humidity and 16:8 h of light and dark cycle.
- Nicotiana tabacum (1 month old plant) leaves were selected for the insect feeding assay.
- the assay included four groups of randomly apportioned insects and leaves, with 8 replicates for each group.
- the groups were: DEPC water (negative control), BEN-etPEI, naked Rieske dsRNA and BReP5.
- the single tender leaf was placed on a moist filter paper in a petri-plate.
- a composition was spread on both sides of each leaf using a paint brush.
- the compositions used were: naked dsRNA: 50 ⁇ ⁇ L DEPC water; BReP5: corresponding to 50 ⁇ g dsRNA/100 ⁇ ; BEN-etPEI: at 6: 1 bentonite :etPEI - the same mass as of BReP5 in 100 ⁇ ; or water: 100
- Four day old larvae were transferred to petri-plates and fed with the first fresh leaves with respective treatments for three days, and then repeated with second fresh leaves treated similarly for another three days. After the sixth day of treatment feeding, larvae were shifted to standard artificial diet for further growth.
- pDMAEMA is poly(2-dimethylaminoethyl methacrylate), of the structure shown below.
- pDMAEMA is a pH-sensitive polymer with a pKa of 7.0-7.5.
- pDMAEMA can be readily synthesised by reversible addition fragmentation chain transfer (RAFT) radical polymerization with a predetermined molecular weight and narrow molecular weight distribution.
- RAFT reversible addition fragmentation chain transfer
- pDMAEMA has an average molecular weight of 15,000 Dalton. However, in this example the pDMAEMA has a molecular weight of 33,000.
- pDMAEMA may be prepared according to the method outlined in Fournier D et al., (2007) Macromolecules, 40, 915-920.
- pDMAEMA powder was dissolved in deionised water and the pH was adjusted to 6- 6.5 using 1.0 M HC1 while stirring. The mass concentration of pDMAEMA was then adjusted to 4 mg/mL.
- Control dsRNA 500 ng, MEGAscript RNAi kit, ⁇ .
- N:P ratios N: amine in pDMAEMA and P: phosphate in dsRNA
- the mixture was incubated at room temperature (RT) for 5 minutes with gradual mixing by inversion.
- Gel electrophoresis was used to examine if there is free dsRNA in the dsRNA-pDMAEMA solutions, and results are provided in Figure 15.
- FIG. 15 The image provided in Figure 15 confirms that some free dsRNA was present in the NPl/2 (dsRNA-pDMAEMA) solution. Complete binding of dsRNA with pDMAEMA occurred in the NP1, NP2 and NP3 solutions.
- An N:P ratio of 1 means that the mass ratio of pDMAEMA:dsRNA is about 1:2. This is because the molecular weight of the monomeric unit in pDMAEMA is 157 (and this unit has only one nitrogen atom), and the average molecular weight of a single base-sugar-phosphate unit in DNA is about 330 (this unit includes one phosphorous atom).
- Ben-pDMAEMA-dsRNA may have approximately 63 wt% of Ben, 13 wt% of pDMAEMA and 25 wt% of dsRNA.
- Bentonite 0.5 g was dispersed in 80 mL deionised water via stirring for 5 minutes, and this suspension was then diluted to a final mass concentration of 5 ⁇ / ⁇
- the dsRNA was added into the pDMAEMA solution at pH 6.0 to make dsRNA-pDMAEMA mixtures at the N:P ratio of 1 (NPl).
- the bentonite suspension was then mixed with the dsRNA-pDMAEMA mixtures (NPl) at a bentonite:pDMAEMA mass ratio of 5:1 to form a BEN-pDMAEMA- dsRNA complexes (at NPl - i.e. BPR5).
- the mixtures were incubated on ice for 15 minutes with gradual mixing by inversion. pH Dependent Release ofdsRNA from dsRNA-pDMAEMA-BEN
- a series of buffer solutions of BPR5 (as prepared above) were prepared at pH 8, 8.5, 9, 9.5, 10, 10.5 and 11. Each of the solutions was prepared with same volume buffer. The mixture was incubated at room temperature (RT) for 5 minutes with gradual mixing by inversion, and then gel electrophoresis was run to examine the release of dsRNA from the dsRNA-pDMAEMA-bentonite complexes. The result is provided in Figure 16.
- NPl dsRNA-pDMAEMA-bentonite complexes started to release dsRNA probably at pH 8.0, and that a substantial amount of dsRNA was released at a pH of from 8.5-11.
- Control dsRNA 500 ng was loaded on pDMAEMA at an N:P ratio (N: amine in pDMAEMA and P: phosphate in dsRNA) of 1 (NPl), as mentioned above.
- NPl complexes were then loaded on bentonite at a mass ratio of 1:5 to make BPR5.
- the final volume of the mixture was adjusted to 10 ⁇ using diethylpyrocarbonate (DEPC) water.
- High salt Nuclease A (0.125 ng) was added and the mixture incubated at 37 °C for 20 minutes.
- Solutions were applied onto the surface of artificial diet cubes ( ⁇ 1 cm 2 ) such that 60 i dsRNA was applied to each cube (a volume of 100 ⁇ .), and the solutions were allowed to percolate into the diet cubes.
- the resultant cubes were subsequently fed to newly emerged neonates of Helicoverpa armigera. Solutions were fed to the larvae three times with an interval of 24 hours between consecutive feeding. New artificial diet cubes were used at the time of application of the dsRNA solutions.
- dsRNAs for Rieske 300 bp - conserved region of sequence
- VDAC 232 bp - conserved region of sequence
- Figures 18 and 19 show that feeding H. armigera larvae with either bentonite- pDMAEMA-Rieske (BP-Rieske) or bentonite-pDMAEMA-VDAC (BP-VDAC) effectively triggered RNAi in the larvae.
- BP-Rieske bentonite- pDMAEMA-Rieske
- BP-VDAC bentonite-pDMAEMA-VDAC
- the BP-Rieske and BP-VDAC repressed the transcript level by 42.8% and 79.4% respectively compared to GFP dsRNA fed larvae.
- naked VDAC dsRNA repressed the transcript level by 22.6% and naked Rieske dsRNA did not suppress the transcript level significantly.
- Advantages of the present invention may include: dsRNA of a large size can be included in the composition;
- the dsRNA in the composition may be protected from nucleases and U.V. light; the molecule having a plurality of positively charged groups may act as a 'pH control' switch to release the dsRNA from the composition at an alkaline pH (for example, for Lepidopteran insects this occurs in the midgut);
- the dsRNA after being sprayed on an insect food, the dsRNA should be viable for weeks;
- the composition has the capacity to cause mortality of insects feeding on food sources sprayed with or comprising the composition
- dsRNA is highly specific to a target organism and is ecologically friendly.
- the composition should not affect species that are not targeted by the composition;
- composition may be prepared easily at relatively low cost
- composition may have a high dsRNA loading capacity
- the composition may have a low toxicity
- composition may be readily dispersed for spraying, drip-feeding or application via irrigation.
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US15/737,539 US10405539B2 (en) | 2015-06-19 | 2016-06-17 | Composition |
DK16810635.9T DK3322295T3 (en) | 2015-06-19 | 2016-06-17 | COMPOSITION |
EP16810635.9A EP3322295B1 (en) | 2015-06-19 | 2016-06-17 | Composition |
BR112017027356-0A BR112017027356B1 (en) | 2015-06-19 | 2016-06-17 | COMPOSITION AND METHOD OF PREPARATION THEREOF, AGRICULTURAL PREPARATION FOR PROTECTING PLANTS AGAINST INSECTS, METHODS FOR DELIVERY OF DOUBLE-STANNED RNA TO AN INSECT AND FOR PROTECTING A CROP AGAINST AN INSECT, AND KIT |
AU2016279912A AU2016279912B2 (en) | 2015-06-19 | 2016-06-17 | Composition |
CN201680043838.6A CN108024542B (en) | 2015-06-19 | 2016-06-17 | Composition comprising a metal oxide and a metal oxide |
MX2017016922A MX370604B (en) | 2015-06-19 | 2016-06-17 | Composition. |
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Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20140150134A1 (en) * | 2011-03-18 | 2014-05-29 | Shanghi Institutes for Biological Sciences, Chines Academy of Science | Insect-combating preparation and method based on rnai technology |
WO2014122648A1 (en) | 2013-02-05 | 2014-08-14 | B. G. Negev Technologies And Applications Ltd. | Positively charged polysaccharides for rna transfection |
Family Cites Families (20)
Publication number | Priority date | Publication date | Assignee | Title |
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ES2192945B1 (en) | 2001-07-06 | 2005-03-01 | Consejo Superior De Investigaciones Cientificas | A METHOD TO INTERFER WITH VIRUS INFECTION IN PLANTS. |
WO2004032862A2 (en) | 2002-10-09 | 2004-04-22 | Insert Therapeutics, Inc. | Cyclodextrin-based materials, compositions and uses related thereto |
WO2004072267A2 (en) | 2003-02-12 | 2004-08-26 | Incyte Corporation | Enzymes |
WO2005030994A1 (en) | 2003-09-26 | 2005-04-07 | International Institute Of Molecular And Cell Biology In Warsaw | Cells and methods useful in characterising the immunotoxic activity of xenobiotic substances |
US20050244439A1 (en) | 2004-04-30 | 2005-11-03 | Eastman Kodak Company | Composition comprising anionic clay layered host material with intercalated functional-active organic compound |
EP1805308A2 (en) | 2004-10-25 | 2007-07-11 | Devgen NV | Multidomain rna molecules comprising at least one aptamer for delivering double stranded rna to pest organisms |
GB0428186D0 (en) * | 2004-12-23 | 2005-01-26 | Univ Dundee | Insecticide Target |
US20090108233A1 (en) | 2004-12-24 | 2009-04-30 | The Univeristy Of Queensland | Preparation of suspensions |
US7619270B2 (en) | 2005-07-25 | 2009-11-17 | Freescale Semiconductor, Inc. | Electronic device including discontinuous storage elements |
CA2670259A1 (en) | 2006-11-15 | 2008-05-22 | Genetic Technologies Limited | Compounds, compositions and methods for controlling invertebrate pests |
US20090062228A1 (en) | 2007-03-07 | 2009-03-05 | Hannon Gregory J | piRNA and uses related thereto |
EP2392662A3 (en) | 2007-04-23 | 2012-03-14 | Basf Se | Plant productivity enhancement by combining chemical agents with transgenic modifications |
US8865668B2 (en) | 2008-02-20 | 2014-10-21 | Devgen N.V. | Methods and compositions for increasing RNA interference |
CA2806295A1 (en) | 2009-08-03 | 2011-02-10 | Alnylam Pharmaceuticals, Inc. | Methods and compositions for treating insects |
BR112014026363A2 (en) * | 2012-04-23 | 2017-06-27 | Futuragene Israel Ltd | ribonucleic acid molecule, dsrna, vector, host cell, plant tissue, isolated nucleic acid, pest resistant plant production method and pest infestation inhibition method |
AU2013317586B2 (en) | 2012-09-24 | 2017-12-07 | Seminis Vegetable Seeds, Inc. | Methods and compositions for extending shelf life of plant products |
EP2945484A4 (en) | 2013-01-15 | 2017-03-29 | Monsanto Technology LLC | Methods and compositions for plant pest control |
WO2014210041A1 (en) * | 2013-06-25 | 2014-12-31 | The United States Of America, As Represented By The Secretary, Department Of Health & Human Service | Glucan-encapsulated sirna for treating type 2 diabetes mellitus |
MX359191B (en) | 2013-07-19 | 2018-09-18 | Monsanto Technology Llc | Compositions and methods for controlling leptinotarsa. |
US10676743B2 (en) | 2013-12-20 | 2020-06-09 | The University Of Queensland | Plant-protecting RNAi compositions comprising plant-protecting double-stranded RNA adsorbed onto layered double hydroxide particles |
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Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20140150134A1 (en) * | 2011-03-18 | 2014-05-29 | Shanghi Institutes for Biological Sciences, Chines Academy of Science | Insect-combating preparation and method based on rnai technology |
WO2014122648A1 (en) | 2013-02-05 | 2014-08-14 | B. G. Negev Technologies And Applications Ltd. | Positively charged polysaccharides for rna transfection |
Non-Patent Citations (8)
Title |
---|
ALLENWALKER: "Saliva of Lygus lineolaris digests double stranded ribonucleic acids", JOURNAL OF INSECT PHYSIOLOGY, vol. 58, 2012, pages 391 - 396, XP055411969, DOI: 10.1016/j.jinsphys.2011.12.014 |
HE, B. ET AL.: "Fluorescent nanoparticle delivered dsRNA toward genetic control of insect pests", ADVANCED MATERIALS, vol. 25, no. 33, 2013, pages 4580 - 4584, XP055337626 * |
See also references of EP3322295A4 |
TENLLADO, F.J.R. DIAZ-RUIZ: "Double-stranded RNA-mediated interference with plant virus infection", JOURNAL VIROLOGY, vol. 75, 2001, pages 12288 - 12297, XP055411603, DOI: 10.1128/JVI.75.24.12288-12297.2001 |
WHYARD ET AL.: "Ingested double stranded RNAs can act as species-specific insecticides", INSECT BIOCHEMISTRY AND MOLECULAR BIOLOGY, vol. 39, 2009, pages 824 - 832, XP026777046, DOI: 10.1016/j.ibmb.2009.09.007 |
YU, N. ET AL.: "Delivery of dsRNA for RNAi in insects: an overview and future directions", INSECT SCIENCE, vol. 20, no. 1, 2013, pages 4 - 14, XP055337622 * |
ZHANG, X. ET AL.: "Chitosan/double-stranded RNA nanoparticle-mediated RNA interference to silence chitin synthase genes through larval feeding in the African malaria mosquito (Anopheles gambiae", INSECT MOLECULAR BIOLOGY, vol. 19, no. 5, 2010, pages 683 - 693, XP055337613 * |
ZHOU, J. ET AL.: "Nanoparticle-based delivery of RNAi therapeutics: progress and challenges", PHARMACEUTICALS, vol. 6, no. 1, 2013, pages 85 - 107, XP055337621 * |
Cited By (2)
Publication number | Priority date | Publication date | Assignee | Title |
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JP7536062B2 (en) | 2017-02-24 | 2024-08-19 | フラグシップ パイオニアリング イノベーションズ ブイ,インコーポレーテッド | Compositions and Related Methods for Modulating Endosymbionts |
WO2019224142A1 (en) | 2018-05-22 | 2019-11-28 | Syngenta Crop Protection Ag | Formulations |
Also Published As
Publication number | Publication date |
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MX370604B (en) | 2019-12-18 |
AU2016279912B2 (en) | 2020-07-09 |
EP3322295A1 (en) | 2018-05-23 |
CN108024542B (en) | 2021-05-14 |
MY189214A (en) | 2022-01-31 |
US10405539B2 (en) | 2019-09-10 |
CA2989664A1 (en) | 2016-12-22 |
EP3322295B1 (en) | 2022-09-28 |
MX2017016922A (en) | 2018-06-27 |
CN108024542A (en) | 2018-05-11 |
CO2018000429A2 (en) | 2018-04-10 |
BR112017027356B1 (en) | 2024-01-02 |
AR105084A1 (en) | 2017-09-06 |
DK3322295T3 (en) | 2022-12-19 |
AU2016279912A1 (en) | 2018-01-18 |
US20180177185A1 (en) | 2018-06-28 |
EP3322295A4 (en) | 2019-01-09 |
BR112017027356A2 (en) | 2018-08-28 |
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