WO2016197837A1 - Fluorescence detection primers of three types of wolbachia and detection method and detection kit thereof - Google Patents

Fluorescence detection primers of three types of wolbachia and detection method and detection kit thereof Download PDF

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WO2016197837A1
WO2016197837A1 PCT/CN2016/084213 CN2016084213W WO2016197837A1 WO 2016197837 A1 WO2016197837 A1 WO 2016197837A1 CN 2016084213 W CN2016084213 W CN 2016084213W WO 2016197837 A1 WO2016197837 A1 WO 2016197837A1
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probe
wolbachia
fluorescence
aedes
type
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高秀洁
杨翠
周其伟
李丽梅
奚志勇
朱俭
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广州威佰昆生物科技有限公司
中山大学达安基因股份有限公司
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    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
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    • C12Q1/6851Quantitative amplification

Definitions

  • the invention belongs to the field of molecular biology, and particularly relates to three kinds of Wolbachia fluorescent detection primers, a detection method thereof and a detection kit.
  • Wolbachia is a symbiotic microbe that is widely distributed in arthropods and is probably the most abundant group of insect symbiotic microorganisms. It is distributed in insect species such as Coleoptera, Diptera, Hemiptera, Homoptera, Hymenoptera, Lepidoptera. It uses vertical propagation as its basic mode of transmission between host generations. It is stably present in the germ cells of the host, is transmitted to the host progeny through the egg cells, and can regulate the reproductive activities of the host by various means such as cytoplasmic incompatibility, femaleification and male sterility. Through these regulatory actions, it promotes its widespread spread within the host population.
  • Cytoplasmic Incompatibility is the most common type of host reproductive behavior change caused by Wolbachia. It is manifested by the fact that when male mosquitoes infected with Wolbachia are mated with uninfected female mosquitoes or male and female mosquitoes infected with different species of Wolbachia, the embryos cannot develop after sperm and egg binding.
  • the cytoplasmic incompatibility of Wolbachia can cause Wolbachia-infected mosquitoes to invade mosquitoes that are not infected or infected with different species of Wolbachia for population suppression and population replacement. Its application has great value for the prevention and control of mosquito-borne diseases.
  • Aedes aegypti and Culex pipiens mosquitoes are divided into Aedes albopictus and Aedes aegypti, in which Aedes aegypti does not carry Wolbachia. Because Wolbachia can only survive in the host and cannot live freely in vitro, how to effectively and specifically detect Wolbachia is an indispensable tool for the study of this bacterium. The more commonly used detection methods are polymerase chain reaction (PCR) and immunostaining. Immunostaining is time consuming and labor intensive.
  • PCR polymerase chain reaction
  • the object of the present invention is to provide a fluorescence detecting primer for three kinds of Wolbachia, such as Aedes type A, Aedes type B and Culex bacillus, which are highly specific, highly specific and sensitive.
  • wAlbAF 5'-CAGGGTTGATGTTGAAGGAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 1);
  • wAlbAR 5'-GCACCAGCTTTTACTTGACC-3' (the nucleotide sequence thereof is shown in SEQ ID NO. 2);
  • Probe A 5'-TATCTTCAATTGCTATATCGTAATAAACG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 3);
  • the two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
  • wAlbBF 5'-AAAGGAACCGAAGTTCATGAT-3' (the nucleotide sequence of which is shown in SEQ ID NO. 4);
  • wAlbBR 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 5);
  • Probe B 5'-CAACATTTGCTCCAACAACTGTTGC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 6);
  • the two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
  • wPipF 5'-GTTTGTGCAGCTAATAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 7);
  • wPipR 5'-GTCTGCAAGGCCTATTTCTACTG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 8);
  • Probe C 5'-CTTTCAATTGAAAAGATTCGATCAAC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 9);
  • Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
  • a second object of the present invention is to provide a method for detecting three Wolbachia for non-disease diagnosis and treatment purposes, characterized in that sample DNA is extracted, and the sample DNA is used as a template to Fluke detection primers wAlbAF, wAlbAR, probe A, wAlbBF, wAlbBR, probe B, wPipF, wPipR and The probe C is subjected to real-time PCR amplification. After the amplification reaction is completed, the PCR cycle number Ct of the sample is read and recorded according to the fluorescence signal of the fluorescence-generating group labeled by the probe, and the Ct value of the sample is determined according to the establishment. Standard, determine whether the sample contains Aedes type A, Aedes type B and Culex pipiens.
  • the fluorescent quantitative PCR amplification is carried out, and the reaction conditions are preferably: pre-denaturation 50 ° C for 5 minutes, 95 ° C for 15 minutes; amplification 94 ° C for 15 seconds, 55 ° C for 45 seconds, 40 cycles; 55 ° C when collecting fluorescence signal.
  • a third object of the present invention is to provide a test kit for three Wolbachia, comprising a fluorescent detection primer and a PCR reagent, wherein the fluorescent detection primer comprises:
  • wAlbAF 5'-CAGGGTTGATGTTGAAGGAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 1);
  • wAlbAR 5'-GCACCAGCTTTTACTTGACC-3' (the nucleotide sequence thereof is shown in SEQ ID NO. 2);
  • Probe A 5'-TATCTTCAATTGCTATATCGTAATAAACG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 3);
  • the two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
  • wAlbBF 5'-AAAGGAACCGAAGTTCATGAT-3' (the nucleotide sequence of which is shown in SEQ ID NO. 4);
  • wAlbBR 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 5);
  • Probe B 5'-CAACATTTGCTCCAACAACTGTTGC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 6);
  • the two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
  • wPipF 5'-GTTTGTGCAGCTAATAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 7);
  • wPipR 5'-GTCTGCAAGGCCTATTTCTACTG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 8);
  • Probe C 5'-CTTTCAATTGAAAAGATTCGATCAAC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 9);
  • Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
  • the detection method of the invention can quickly and efficiently detect the Aedes type A, the Aedes type B and the Culex pipiens, which have specificity and high specificity.
  • Mosquitoes detected A. sinensis Wolbachia
  • Culex pipiens detected only C. sinensis, and the sensitivity was high.
  • the minimum detection limit was 100 copies/ml.
  • the invention has the advantages of rapid and high efficiency, simple operation, high specificity, high sensitivity, and simple identification.
  • Figure 1 is a graph showing the results of the sensitivity of Aedes A type Wolbachia, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
  • FIG. 2 is a graph showing experimental results of the sensitivity of Aedes B-type Wolbachia, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
  • FIG. 3 is a graph showing experimental results of the sensitivity of Culex pipiens, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
  • Figure 4 is a graph showing the experimental results of the repeatability of Aedes aegypti and Culex pipiens, wherein I and II represent amplification curves of different samples, respectively;
  • Figure 5 is a graph showing the results of the specificity of the FAM detection channel for Aedes type A Wolbachia
  • Figure 6 is a graph showing the experimental results of the specificity of the FAM detection channel for Aedes type B and wPip type Wolbachia (Culex vaccae);
  • Figure 7 is a graph showing the results of the specificity of the HEX detection channel for Aedes B-type Wolbachia
  • Figure 8 is a graph showing the results of the specificity of the HEX detection channel for Aedes type A and wPip type Wolbachia (Culex vaccae);
  • Figure 9 is a graph showing the results of experiments on the specificity of the Texas Red detection channel for wPip type Wolbachia (Culex vaccae);
  • Figure 10 is a graph showing the experimental results of the specificity of the Texas Red detection channel for Aedes type A and B type Wolbachia.
  • a mosquito carrying Aedes A-type Wolbachia is smoked by carbon dioxide, and the abdomen is placed in a 0.2ul EP tube;
  • DNA extract (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
  • the DNA extract is subjected to 10, 100, 1000 gradient dilution, and each gradient has two parallel, a total of 8 samples, and PCR amplification is performed as template DNA;
  • the PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 ⁇ l) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescence quenching group BHQ1), 10 pmol of a fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), and 10 pmol of a fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC -3'), 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC-3', both ends of the probe are bound to the fluorescence generating group HEX and the fluorescence quenching group BHQ1, respectively), 10 pmol of the fluorescent
  • the PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 ⁇ l of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
  • the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution
  • the concentration is 100 copies/ml.
  • the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
  • the experimental procedure for the sensitivity of Aedes B-type Wolbachia is the same as that of Aedes A-type Wolbachia, except that the template DNA is replaced with the genomic DNA of Aedes B-type Wolbachia.
  • the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution
  • the concentration is 100 copies/ml.
  • the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
  • the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution
  • the concentration is 100 copies/ml.
  • the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
  • Aedes albopictus (carrying Aedes type A, Aedes type B and Culex mosquitoes) after being smoked by carbon dioxide, the anatomical abdomen was placed in a 0.2ul EP tube;
  • DNA extract (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
  • the PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 ⁇ l) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescence quenching group BHQ1), 10 pmol of a fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), and 10 pmol of a fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC -3'), 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC-3', both ends of the probe are bound to the fluorescence generating group HEX and the fluorescence quenching group BHQ1, respectively), 10 pmol of the fluorescent
  • the PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 ⁇ l of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
  • the genomic DNA samples of two Aedes type A, Aedes type B and Culex bacillus can amplify the reaction curve for 10 times, and the Ct is less than 38, which is judged as Positive, thereby indicating that the fluorescent detection primer of the present invention can simultaneously detect Aedes type A, Aedes type B and Culex pipiens, and has good repeatability.
  • DNA extract (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
  • the PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 ⁇ l) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescent quenching group BHQ1), and the rest are buffers having a pH of 8.0.
  • the buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
  • the PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 ⁇ l of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
  • the PCR A solution contains 10 pmol of fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), 10 pmol of fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC-3'), and 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC- per 18 ⁇ l) 3', both ends of the probe are combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1), and the rest are buffers having a pH of 8.0.
  • the buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
  • the PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 ⁇ l of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
  • the PCR A solution contains 10 pmol of fluorescent detection primer wPipF (5'-GTTTGTGCAGCTAATAG-3'), 10 pmol of fluorescent detection primer wPipR (5'-GTCTGCAAGGCCTATTTCTACTG-3'), and 5 pmol of probe C (5'-CTTTCAATTGAAAAGATTCGATCAAC- per 18 ⁇ l) 3', the two ends of the probe are respectively combined with a fluorescent generating group Texas Red and a fluorescence quenching group BHQ2), and the rest are buffers having a pH of 8.0.
  • the buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
  • the PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 ⁇ l of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
  • the result judgment criterion is: if the amplification reaction curve of the gene to be detected appears, and the Ct value is less than 38, it is judged to be positive if 38 ⁇ Ct ⁇ 40, judged to be suspicious, suspiciously increased the amount of template, repeated amplification, if the same experimental result is obtained, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
  • the FAM channel (only for the Aedes type A Wolbachia fluorescent detection primers wAlbAF, wAlbAR and probe A, PCR group 1) only shows Aedes type A Wolbach The austenite amplification curve is positive, while both B-type Wolbachia and Culex pipiens have no amplification curve and are negative.
  • the HEX channel (only for fluorescence detection primers for Aedes B-type Wolbachia) wAlbBF, wAlbBR and probe B, PCR group 2) only shows the amplification curve of Aedes B type Wolbachia, which is positive, while neither type A Wolbachia nor C. sinensis Wolbachia The amplification curve was negative.
  • the Texas Red channel (only for the fluorescence detection primers for Culex pipa, wPipF, wPipR and probe C, PCR group 3) only shows the mosquitoes of Volkswagen The amplification curve was positive, while both type A Wolbachia and B-type Wolbachia had no amplification curve and were negative.
  • the fluorescent detection primer of the present invention can detect Aedes A, Aedes B type Wolbachia and Culex pipiens, and can distinguish Aedes type A and Aedes type B Wall Bark's body and Culex pipiens.

Abstract

Disclosed are fluorescence detection primers of three types of Wolbachia and a detection method and detection kit thereof. Using the fluorescence detection primers of the present invention, Aedes type A, Aedes type B and Culex Wolbachia can be detected according to the detection method of the present invention, and only Aedes Wolbachia is detected in the Aedes, while only Culex Wolbachia is detected in the Culex, and the lowest detection limit is 100 copies/ml.

Description

三种沃尔巴克氏体的荧光检测引物及其检测方法和检测试剂盒Three kinds of Wolbachia fluorescence detection primers, detection method and detection kit thereof 技术领域:Technical field:
本发明属于分子生物学领域,具体涉及三种沃尔巴克氏体的荧光检测引物及其检测方法和检测试剂盒。The invention belongs to the field of molecular biology, and particularly relates to three kinds of Wolbachia fluorescent detection primers, a detection method thereof and a detection kit.
背景技术:Background technique:
沃尔巴克氏体(Wolbachia)是广泛分布于节肢动物体内的共生微生物,它可能是昆虫共生微生物中最为丰富的类群。它分布于鞘翅目、双翅目、半翅目、同翅目、膜翅目、鳞翅目等昆虫种类中。它以垂直传播作为其在宿主世代间传递的基本模式。它稳定地存在于宿主的生殖细胞内,通过卵细胞传递给宿主子代,并可通过多种方式如细胞质不亲和、雌性化和杀雄性等调控宿主的生殖活动。通过这些调控作用促进其在宿主种群内广泛传播。Wolbachia is a symbiotic microbe that is widely distributed in arthropods and is probably the most abundant group of insect symbiotic microorganisms. It is distributed in insect species such as Coleoptera, Diptera, Hemiptera, Homoptera, Hymenoptera, Lepidoptera. It uses vertical propagation as its basic mode of transmission between host generations. It is stably present in the germ cells of the host, is transmitted to the host progeny through the egg cells, and can regulate the reproductive activities of the host by various means such as cytoplasmic incompatibility, femaleification and male sterility. Through these regulatory actions, it promotes its widespread spread within the host population.
在沃尔巴克氏体(Wolbachia)引起的宿主生殖行为改变中,细胞质不亲和(Cytoplasmic Incompatibility,CI)是最常见的一种类型。它表现为当被沃尔巴克氏体(Wolbachia)感染的雄蚊与未感染雌蚊或感染不同种类Wolbachia的雌雄蚊交配时,精子和卵子结合后胚胎无法发育。沃尔巴克氏体(Wolbachia)的胞质不亲和的特性可导致Wolbachia感染的蚊能侵入未感染或感染不同种Wolbachia的蚊群进行种群压制和种群替代。它的应用对蚊媒病防治具有巨大的价值。近期研究发现,沃尔巴克氏体(Wolbachia)不仅具有上述的特性外,同时它还能在蚊子体内与蚊子携带的一些重要的病原生物(如登革病毒,疟原虫等)相互作用,抑制它们在蚊子体内的增值和扩散从而在阻断这些病原生物传播于人类。沃尔巴克氏体(Wolbachia)的这种抑制作用与它在蚊子体内组织的分布相关,所以,了解沃尔巴克氏体(Wolbachia)在蚊子体内组织分布有助于快速筛选出传播阻断效果最好的沃尔巴克氏体(Wolbachia)感染的蚊子,也有助于监测沃尔巴克氏体(Wolbachia)在蚊群中的垂直传播,同时也有利于高效率地监测大规模大地域范围的沃尔巴克氏体(Wolbachia)在蚊子组织中的感染情况。Cytoplasmic Incompatibility (CI) is the most common type of host reproductive behavior change caused by Wolbachia. It is manifested by the fact that when male mosquitoes infected with Wolbachia are mated with uninfected female mosquitoes or male and female mosquitoes infected with different species of Wolbachia, the embryos cannot develop after sperm and egg binding. The cytoplasmic incompatibility of Wolbachia can cause Wolbachia-infected mosquitoes to invade mosquitoes that are not infected or infected with different species of Wolbachia for population suppression and population replacement. Its application has great value for the prevention and control of mosquito-borne diseases. Recent studies have found that Wolbachia not only has the above characteristics, but also interacts with some important pathogens (such as dengue viruses, malaria parasites, etc.) carried by mosquitoes in mosquitoes and inhibits them. The proliferation and spread in mosquitoes thus blocks the transmission of these pathogens to humans. This inhibition of Wolbachia is related to its distribution in the tissues of mosquitoes. Therefore, understanding the tissue distribution of Wolbachia in mosquitoes can help to quickly screen out the most blocking effects. Good Wolbachia-infected mosquitoes also help to monitor the vertical transmission of Wolbachia in mosquitoes, and also to efficiently monitor large-scale large-area Walls. Infection of Wolbachia in mosquito tissues.
在自然界中,蚊子的种类有很多,常见的有伊蚊和库蚊两种。伊蚊分为白纹伊蚊和埃及伊蚊,其中埃及伊蚊不携带沃尔巴克氏体。由于沃尔巴克氏菌只能存活于宿主体内,不能在体外自由生活,因而如何有效特异地检测沃尔巴克氏菌是对该细菌研究的必备工具。比较常用的检测手段有聚合酶链反应法(PCR法)和免疫染色法。免疫染色法耗时耗力,而且特异性不好。随着PCR方法的普及,针对沃尔巴克氏体的检测有了很大的进步。不同蚊种 携带不同的沃尔巴克氏体,通过PCR结果能够直观的看出蚊子携带的不同沃尔巴克氏体类型,这样为我们的日常检测提供了很大的便利。目前针对不同沃尔巴克氏体PCR检测的方法还不完善。In nature, there are many types of mosquitoes, and there are two types of mosquitoes, Aedes aegypti and Culex pipiens. Aedes mosquitoes are divided into Aedes albopictus and Aedes aegypti, in which Aedes aegypti does not carry Wolbachia. Because Wolbachia can only survive in the host and cannot live freely in vitro, how to effectively and specifically detect Wolbachia is an indispensable tool for the study of this bacterium. The more commonly used detection methods are polymerase chain reaction (PCR) and immunostaining. Immunostaining is time consuming and labor intensive. With the popularity of PCR methods, great progress has been made in the detection of Wolbachia. Different mosquito species Carrying different Wolbachia, the results of the PCR can visually show the different types of Wolbachia carried by mosquitoes, which provides great convenience for our daily testing. At present, the methods for different Wolbachia PCR detection are still not perfect.
发明内容:Summary of the invention:
本发明的目的是提供一种专一性强、特异性高和灵敏度高的伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体等三种沃尔巴克氏体的荧光检测引物。The object of the present invention is to provide a fluorescence detecting primer for three kinds of Wolbachia, such as Aedes type A, Aedes type B and Culex bacillus, which are highly specific, highly specific and sensitive.
本发明的三种沃尔巴克氏体的荧光检测引物,其特征在于,包括Three kinds of Wolbachia fluorescence detecting primers of the present invention, characterized in that
(1)针对伊蚊A型沃尔巴克氏体:(1) For Aedes type A Wolbachia:
wAlbAF:5’-CAGGGTTGATGTTGAAGGAG-3’(其核苷酸序列如SEQ ID NO.1所示);wAlbAF: 5'-CAGGGTTGATGTTGAAGGAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 1);
wAlbAR:5’-GCACCAGCTTTTACTTGACC-3’(其核苷酸序列如SEQ ID NO.2所示);wAlbAR: 5'-GCACCAGCTTTTACTTGACC-3' (the nucleotide sequence thereof is shown in SEQ ID NO. 2);
探针A:5’-TATCTTCAATTGCTATATCGTAATAAACG-3’(其核苷酸序列如SEQ ID NO.3所示);Probe A: 5'-TATCTTCAATTGCTATATCGTAATAAACG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 3);
探针A两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1;The two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
(2)针对伊蚊B型沃尔巴克氏体:(2) For Aedes B type Wolbachia:
wAlbBF:5’-AAAGGAACCGAAGTTCATGAT-3’(其核苷酸序列如SEQ ID NO.4所示);wAlbBF: 5'-AAAGGAACCGAAGTTCATGAT-3' (the nucleotide sequence of which is shown in SEQ ID NO. 4);
wAlbBR:5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’(其核苷酸序列如SEQ ID NO.5所示);wAlbBR: 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 5);
探针B:5’-CAACATTTGCTCCAACAACTGTTGC-3’(其核苷酸序列如SEQ ID NO.6所示);Probe B: 5'-CAACATTTGCTCCAACAACTGTTGC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 6);
探针B两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1;The two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
(3)针对库蚊沃尔巴克氏体:(3) For Culex mosquitoes:
wPipF:5’-GTTTGTGCAGCTAATAG-3’(其核苷酸序列如SEQ ID NO.7所示);wPipF: 5'-GTTTGTGCAGCTAATAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 7);
wPipR:5’-GTCTGCAAGGCCTATTTCTACTG-3’(其核苷酸序列如SEQ ID NO.8所示);wPipR: 5'-GTCTGCAAGGCCTATTTCTACTG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 8);
探针C:5’-CTTTCAATTGAAAAGATTCGATCAAC-3’(其核苷酸序列如SEQ ID NO.9所示);Probe C: 5'-CTTTCAATTGAAAAGATTCGATCAAC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 9);
探针C两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2。Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
本发明的第二个目的是提供一种非疾病的诊断和治疗目的的三种沃尔巴克氏体的检测方法,其特征在于,提取样品DNA,以该样品DNA为模板,以上述三种沃尔巴克氏体的荧光检测引物wAlbAF、wAlbAR、探针A、wAlbBF、wAlbBR、探针B、wPipF、wPipR和 探针C进行荧光定量PCR扩增,扩增反应完成后,根据探针标记的荧光发生基团的荧光信号,读取并记录样品的PCR循环次数Ct,根据样品的Ct值,按照建立的判断标准,判断样品是否含有伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体。A second object of the present invention is to provide a method for detecting three Wolbachia for non-disease diagnosis and treatment purposes, characterized in that sample DNA is extracted, and the sample DNA is used as a template to Fluke detection primers wAlbAF, wAlbAR, probe A, wAlbBF, wAlbBR, probe B, wPipF, wPipR and The probe C is subjected to real-time PCR amplification. After the amplification reaction is completed, the PCR cycle number Ct of the sample is read and recorded according to the fluorescence signal of the fluorescence-generating group labeled by the probe, and the Ct value of the sample is determined according to the establishment. Standard, determine whether the sample contains Aedes type A, Aedes type B and Culex pipiens.
所述的进行荧光定量PCR扩增,其反应条件优选为:预变性50℃5分钟,95℃15分钟;扩增94℃15秒、55℃45秒,40个循环;55℃的时候收集荧光信号。The fluorescent quantitative PCR amplification is carried out, and the reaction conditions are preferably: pre-denaturation 50 ° C for 5 minutes, 95 ° C for 15 minutes; amplification 94 ° C for 15 seconds, 55 ° C for 45 seconds, 40 cycles; 55 ° C when collecting fluorescence signal.
本发明的第三个目的是提供一种三种沃尔巴克氏体的检测试剂盒,包括荧光检测引物和PCR试剂,其特征在于,所述的荧光检测引物包括:A third object of the present invention is to provide a test kit for three Wolbachia, comprising a fluorescent detection primer and a PCR reagent, wherein the fluorescent detection primer comprises:
(1)针对伊蚊A型沃尔巴克氏体:(1) For Aedes type A Wolbachia:
wAlbAF:5’-CAGGGTTGATGTTGAAGGAG-3’(其核苷酸序列如SEQ ID NO.1所示);wAlbAF: 5'-CAGGGTTGATGTTGAAGGAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 1);
wAlbAR:5’-GCACCAGCTTTTACTTGACC-3’(其核苷酸序列如SEQ ID NO.2所示);wAlbAR: 5'-GCACCAGCTTTTACTTGACC-3' (the nucleotide sequence thereof is shown in SEQ ID NO. 2);
探针A:5’-TATCTTCAATTGCTATATCGTAATAAACG-3’(其核苷酸序列如SEQ ID NO.3所示);Probe A: 5'-TATCTTCAATTGCTATATCGTAATAAACG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 3);
探针A两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1;The two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
(2)针对伊蚊B型沃尔巴克氏体:(2) For Aedes B type Wolbachia:
wAlbBF:5’-AAAGGAACCGAAGTTCATGAT-3’(其核苷酸序列如SEQ ID NO.4所示);wAlbBF: 5'-AAAGGAACCGAAGTTCATGAT-3' (the nucleotide sequence of which is shown in SEQ ID NO. 4);
wAlbBR:5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’(其核苷酸序列如SEQ ID NO.5所示);wAlbBR: 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 5);
探针B:5’-CAACATTTGCTCCAACAACTGTTGC-3’(其核苷酸序列如SEQ ID NO.6所示);Probe B: 5'-CAACATTTGCTCCAACAACTGTTGC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 6);
探针B两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1;The two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
(3)针对库蚊沃尔巴克氏体:(3) For Culex mosquitoes:
wPipF:5’-GTTTGTGCAGCTAATAG-3’(其核苷酸序列如SEQ ID NO.7所示);wPipF: 5'-GTTTGTGCAGCTAATAG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 7);
wPipR:5’-GTCTGCAAGGCCTATTTCTACTG-3’(其核苷酸序列如SEQ ID NO.8所示);wPipR: 5'-GTCTGCAAGGCCTATTTCTACTG-3' (the nucleotide sequence of which is shown in SEQ ID NO. 8);
探针C:5’-CTTTCAATTGAAAAGATTCGATCAAC-3’(其核苷酸序列如SEQ ID NO.9所示);Probe C: 5'-CTTTCAATTGAAAAGATTCGATCAAC-3' (the nucleotide sequence of which is shown in SEQ ID NO. 9);
探针C两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2。Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
利用本发明的荧光检测引物按照本发明的检测方法能够快速高效专一的检测出伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体,具有专一性强,特异性高(伊蚊只检测出伊蚊沃尔巴克氏体,而库蚊只检测出库蚊沃尔巴克氏体),灵敏度高,其最低检测限为100copies/ml。According to the detection method of the invention, the detection method of the invention can quickly and efficiently detect the Aedes type A, the Aedes type B and the Culex pipiens, which have specificity and high specificity. Mosquitoes detected A. sinensis Wolbachia, while Culex pipiens detected only C. sinensis, and the sensitivity was high. The minimum detection limit was 100 copies/ml.
因此,本发明具有快速高效、操作简便、高特异性、高灵敏度、鉴定简便等优点。 Therefore, the invention has the advantages of rapid and high efficiency, simple operation, high specificity, high sensitivity, and simple identification.
附图说明:BRIEF DESCRIPTION OF THE DRAWINGS:
图1是伊蚊A型沃尔巴克氏体的灵敏度的实验结果图,其中Ⅰ、Ⅱ、Ⅲ、Ⅳ分别代表DNA抽提液,10、100、1000倍稀释的DNA抽提液;Figure 1 is a graph showing the results of the sensitivity of Aedes A type Wolbachia, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
图2是伊蚊B型沃尔巴克氏体的灵敏度的实验结果图,其中Ⅰ、Ⅱ、Ⅲ、Ⅳ分别代表DNA抽提液,10、100、1000倍稀释的DNA抽提液;2 is a graph showing experimental results of the sensitivity of Aedes B-type Wolbachia, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
图3是库蚊沃尔巴克氏体的灵敏度的实验结果图,其中Ⅰ、Ⅱ、Ⅲ、Ⅳ分别代表DNA抽提液,10、100、1000倍稀释的DNA抽提液;3 is a graph showing experimental results of the sensitivity of Culex pipiens, wherein I, II, III, and IV represent DNA extracts, 10, 100, and 1000-fold diluted DNA extracts, respectively;
图4是伊蚊和库蚊沃尔巴克氏体的重复性的实验结果图,其中Ⅰ、Ⅱ分别代表不同的样品的扩增曲线;Figure 4 is a graph showing the experimental results of the repeatability of Aedes aegypti and Culex pipiens, wherein I and II represent amplification curves of different samples, respectively;
图5是FAM检测通道对伊蚊A型沃尔巴克氏体的特异性的实验结果图;Figure 5 is a graph showing the results of the specificity of the FAM detection channel for Aedes type A Wolbachia;
图6是FAM检测通道对伊蚊B型和wPip型沃尔巴克氏体(库蚊沃尔巴克氏体)的特异性的实验结果图;Figure 6 is a graph showing the experimental results of the specificity of the FAM detection channel for Aedes type B and wPip type Wolbachia (Culex vaccae);
图7是HEX检测通道对伊蚊B型沃尔巴克氏体的特异性的实验结果图;Figure 7 is a graph showing the results of the specificity of the HEX detection channel for Aedes B-type Wolbachia;
图8是HEX检测通道对伊蚊A型和wPip型沃尔巴克氏体(库蚊沃尔巴克氏体)的特异性的实验结果图;Figure 8 is a graph showing the results of the specificity of the HEX detection channel for Aedes type A and wPip type Wolbachia (Culex vaccae);
图9是Texas Red检测通道对wPip型沃尔巴克氏体(库蚊沃尔巴克氏体)的特异性的实验结果图;Figure 9 is a graph showing the results of experiments on the specificity of the Texas Red detection channel for wPip type Wolbachia (Culex vaccae);
图10是Texas Red检测通道对伊蚊A型和B型沃尔巴克氏体的特异性的实验结果图。Figure 10 is a graph showing the experimental results of the specificity of the Texas Red detection channel for Aedes type A and B type Wolbachia.
具体实施方式:detailed description:
以下实施例是对本发明的进一步说明,而不是对本发明的限制。The following examples are intended to further illustrate the invention and not to limit the invention.
实施例1:灵敏度Example 1: Sensitivity
一、伊蚊A型沃尔巴克氏体的灵敏度First, the sensitivity of Aedes A type Wolbachia
1、一只携带伊蚊A型沃尔巴克氏体的蚊子经二氧化碳熏晕后,解剖腹部置于0.2ul EP管中;1. A mosquito carrying Aedes A-type Wolbachia is smoked by carbon dioxide, and the abdomen is placed in a 0.2ul EP tube;
2、加入20ulDNA提取液(DNA提取液的配方为:30mM NaOH、0.25mM EDTA、15mMTris-HCl,溶剂为水,使用前需振荡,将白色片状物一同加入);2. Add 20 ul of DNA extract (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
3、充分混匀;3, fully mix;
4、瞬时离心后,99℃温浴10分钟;4. After transient centrifugation, warm bath at 99 ° C for 10 minutes;
5、得到DNA抽提液,-20℃保存,即获得伊蚊A型沃尔巴克氏体的基因组DNA; 5. Obtaining the DNA extract and storing at -20 ° C to obtain the genomic DNA of Aedes type A Wolbachia;
6、将DNA抽提液进行10,100,1000梯度稀释,每个梯度有两个平行,共8个样本,作为模板DNA进行PCR扩增;6. The DNA extract is subjected to 10, 100, 1000 gradient dilution, and each gradient has two parallel, a total of 8 samples, and PCR amplification is performed as template DNA;
7、PCR扩增体系:7. PCR amplification system:
模板DNA 2μl、PCR A液18μl和PCR B液2μl。2 μl of template DNA, 18 μl of PCR A solution and 2 μl of PCR B solution.
所述的PCR A液,每18μl含有10pmol荧光检测引物wAlbAF(5’-CAGGGTTGATGTTGAAGGAG-3’)、10pmol荧光检测引物wAlbAR(5’-GCACCAGCTTTTACTTGACC-3’)、5pmol探针A(5’-TATCTTCAATTGCTATATCGTAATAAACG-3’,探针的两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1),10pmol荧光检测引物wAlbBF(5’-AAAGGAACCGAAGTTCATGAT-3’)、10pmol荧光检测引物wAlbBR(5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’)、5pmol探针B(5’-CAACATTTGCTCCAACAACTGTTGC-3’,探针的两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1),10pmol荧光检测引物wPipF(5’-GTTTGTGCAGCTAATAG-3’)、10pmol荧光检测引物wPipR(5’-GTCTGCAAGGCCTATTTCTACTG-3’)、5pmol探针C(5’-CTTTCAATTGAAAAGATTCGATCAAC-3’,探针的两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2),其余为pH值为8.0的缓冲液。所述的缓冲液成份为50mmol/L Tris-HCl、8mmol/L MgCl2、250mmol/L KCl,溶剂为水。The PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 μl) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescence quenching group BHQ1), 10 pmol of a fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), and 10 pmol of a fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC -3'), 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC-3', both ends of the probe are bound to the fluorescence generating group HEX and the fluorescence quenching group BHQ1, respectively), 10 pmol of the fluorescent detection primer wPipF (5'-GTTTGTGCAGCTAATAG -3'), 10pmol fluorescence detection primer wPipR (5'-GTCTGCAAGGCCTATTTCTACTG-3'), 5pmol probe C (5'-CTTTCAATTGAAAAGATTCGATCAAC-3', both ends of the probe are bound to the fluorescence generating group Texas Red and fluorescence quenching The group BHQ2), the rest is a buffer with a pH of 8.0. The buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
所述的PCR B液由热启动Taq酶、逆转录酶、dNTPs组成,每2μl PCR B液中含有热启动Taq酶5U、逆转录酶2.5U和dNTPs 10mmol,其余为水。The PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 μl of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
8、混匀后进行PCR扩增;8. After mixing, perform PCR amplification;
9、PCR反应条件:9, PCR reaction conditions:
预变性  50℃  2minPre-denaturation 50 ° C 2 min
        95℃  15min95 ° C 15 min
扩增    94℃  15sAmplification 94 ° C 15s
        55℃  45s  40个循环,55℃时收集荧光55 ° C 45s 40 cycles, collecting fluorescence at 55 ° C
10、扩增结束后观察扩增曲线。10. Observe the amplification curve after the end of amplification.
具体结果如图1所示,结果判断标准:如果出现待测基因的扩增反应曲线,且Ct值小于38,则判断为阳性,如果38<Ct<40,判断为可疑,可疑加大模板量,重复扩增,如果得到相同的实验结果,则判断为阳性,否则为阴性,如果Ct值为0或40,则判断为阴性。The specific results are shown in Figure 1. The result is judged as follows: If the amplification reaction curve of the gene to be tested appears, and the Ct value is less than 38, it is judged as positive. If 38<Ct<40, it is judged to be suspicious. Repeat amplification, if it is the same experimental result, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
从图1可以看出,DNA抽提液、10、100、1000倍稀释的DNA抽提液都能扩增出反应曲线,其Ct都小于38,判断为阳性,1000倍稀释的溶液中的DNA浓度为100copies/ml。 由此,本发明的荧光检测引物的检测下限为100copies/ml。It can be seen from Fig. 1 that the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution The concentration is 100 copies/ml. Thus, the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
二、伊蚊B型沃尔巴克氏体的灵敏度Second, the sensitivity of Aedes B type Wolbachia
伊蚊B型沃尔巴克氏体的灵敏度的实验流程同伊蚊A型沃尔巴克氏体的灵敏度试验,只是模板DNA换成伊蚊B型沃尔巴克氏体的基因组DNA。The experimental procedure for the sensitivity of Aedes B-type Wolbachia is the same as that of Aedes A-type Wolbachia, except that the template DNA is replaced with the genomic DNA of Aedes B-type Wolbachia.
具体结果如图2所示,结果判断标准:如果出现待测基因的扩增反应曲线,且Ct值小于38,则判断为阳性,如果38<Ct<40,判断为可疑,可疑加大模板量,重复扩增,如果得到相同的实验结果,则判断为阳性,否则为阴性,如果Ct值为0或40,则判断为阴性。The specific results are shown in Figure 2. The result is judged as follows: If the amplification reaction curve of the gene to be tested appears, and the Ct value is less than 38, it is judged as positive. If 38<Ct<40, it is judged as suspicious and suspiciously increases the amount of template. Repeat amplification, if it is the same experimental result, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
从图2可以看出,DNA抽提液、10、100、1000倍稀释的DNA抽提液都能扩增出反应曲线,其Ct都小于38,判断为阳性,1000倍稀释的溶液中的DNA浓度为100copies/ml。由此,本发明的荧光检测引物的检测下限为100copies/ml。It can be seen from Fig. 2 that the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution The concentration is 100 copies/ml. Thus, the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
二、库蚊沃尔巴克氏体的灵敏度Second, the sensitivity of Culex pipa
库蚊沃尔巴克氏体的灵敏度的实验流程同伊蚊A型沃尔巴克氏体的灵敏度试验,只是模板DNA换成库蚊沃尔巴克氏体的基因组DNA。The experimental procedure for the sensitivity of Culex mosquitoes to Wolbachia was tested with the sensitivity of Aedes type A Wolbachia, except that the template DNA was replaced with the genomic DNA of Culex pipiens.
具体结果如图3所示,结果判断标准:如果出现待测基因的扩增反应曲线,且Ct值小于38,则判断为阳性,如果38<Ct<40,判断为可疑,可疑加大模板量,重复扩增,如果得到相同的实验结果,则判断为阳性,否则为阴性,如果Ct值为0或40,则判断为阴性。The specific results are shown in Figure 3. The result is judged as follows: If the amplification reaction curve of the gene to be tested appears, and the Ct value is less than 38, it is judged as positive. If 38<Ct<40, it is judged to be suspicious, and the amount of template is suspected to be increased. Repeat amplification, if it is the same experimental result, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
从图3可以看出,DNA抽提液、10、100、1000倍稀释的DNA抽提液都能扩增出反应曲线,其Ct都小于38,判断为阳性,1000倍稀释的溶液中的DNA浓度为100copies/ml。由此,本发明的荧光检测引物的检测下限为100copies/ml。It can be seen from Fig. 3 that the DNA extract, 10, 100, and 1000-fold diluted DNA extracts can amplify the reaction curve, and the Ct is less than 38, which is judged to be positive, and the DNA in the 1000-fold diluted solution The concentration is 100 copies/ml. Thus, the detection limit of the fluorescent detection primer of the present invention is 100 copies/ml.
实施例2:重复性Example 2: Repeatability
1、两只三重感染的白纹伊蚊(携带伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体)经二氧化碳熏晕后,解剖腹部分别置于0.2ul EP管中;1. Two triple-infected Aedes albopictus (carrying Aedes type A, Aedes type B and Culex mosquitoes) after being smoked by carbon dioxide, the anatomical abdomen was placed in a 0.2ul EP tube;
2、加入20ul DNA提取液(DNA提取液的配方为:30mM NaOH、0.25mM EDTA、15mMTris-HCl,溶剂为水,使用前需振荡,将白色片状物一同加入);2. Add 20 ul of DNA extract (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
3、充分混匀;3, fully mix;
4、瞬时离心后,99℃温浴10分钟;4. After transient centrifugation, warm bath at 99 ° C for 10 minutes;
5、得到DNA抽提液,-20℃保存,即获得伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体的基因组DNA;5. Obtain DNA extract and store at -20 °C to obtain genomic DNA of Aedes type A, Aedes type B and Culex pipiens.
6、上述伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体的基因组DNA作为模板DNA进行 10次重复,共计20个样本;6. Genomic DNA of the above Aedes type A, Aedes type B and Culex platicoides as template DNA 10 repetitions, for a total of 20 samples;
7、PCR扩增体系:7. PCR amplification system:
模板DNA 2μl、PCR A液18μl和PCR B液2μl。2 μl of template DNA, 18 μl of PCR A solution and 2 μl of PCR B solution.
所述的PCR A液,每18μl含有10pmol荧光检测引物wAlbAF(5’-CAGGGTTGATGTTGAAGGAG-3’)、10pmol荧光检测引物wAlbAR(5’-GCACCAGCTTTTACTTGACC-3’)、5pmol探针A(5’-TATCTTCAATTGCTATATCGTAATAAACG-3’,探针的两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1),10pmol荧光检测引物wAlbBF(5’-AAAGGAACCGAAGTTCATGAT-3’)、10pmol荧光检测引物wAlbBR(5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’)、5pmol探针B(5’-CAACATTTGCTCCAACAACTGTTGC-3’,探针的两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1),10pmol荧光检测引物wPipF(5’-GTTTGTGCAGCTAATAG-3’)、10pmol荧光检测引物wPipR(5’-GTCTGCAAGGCCTATTTCTACTG-3’)、5pmol探针C(5’-CTTTCAATTGAAAAGATTCGATCAAC-3’,探针的两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2),其余为pH值为8.0的缓冲液。所述的缓冲液成份为50mmol/L Tris-HCl、8mmol/L MgCl2、250mmol/L KCl,溶剂为水。The PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 μl) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescence quenching group BHQ1), 10 pmol of a fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), and 10 pmol of a fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC -3'), 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC-3', both ends of the probe are bound to the fluorescence generating group HEX and the fluorescence quenching group BHQ1, respectively), 10 pmol of the fluorescent detection primer wPipF (5'-GTTTGTGCAGCTAATAG -3'), 10pmol fluorescence detection primer wPipR (5'-GTCTGCAAGGCCTATTTCTACTG-3'), 5pmol probe C (5'-CTTTCAATTGAAAAGATTCGATCAAC-3', both ends of the probe are bound to the fluorescence generating group Texas Red and fluorescence quenching The group BHQ2), the rest is a buffer with a pH of 8.0. The buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
所述的PCR B液由热启动Taq酶、逆转录酶、dNTPs组成,每2μl PCR B液中含有热启动Taq酶5U、逆转录酶2.5U和dNTPs 10mmol,其余为水。The PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 μl of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
8、混匀后进行PCR扩增;8. After mixing, perform PCR amplification;
9、PCR反应条件:9, PCR reaction conditions:
预变性  50℃  2minPre-denaturation 50 ° C 2 min
        95℃  15min95 ° C 15 min
扩增    94℃  15sAmplification 94 ° C 15s
        55℃  45s  40个循环,55℃时收集荧光55 ° C 45s 40 cycles, collecting fluorescence at 55 ° C
10、扩增结束后观察扩增曲线。10. Observe the amplification curve after the end of amplification.
具体结果如图4所示,结果判断标准:如果出现待测基因的扩增反应曲线,且Ct值小于38,则判断为阳性,如果38<Ct<40,判断为可疑,可疑加大模板量,重复扩增,如果得到相同的实验结果,则判断为阳性,否则为阴性,如果Ct值为0或40,则判断为阴性。The specific results are shown in Figure 4. The result is judged as follows: If the amplification reaction curve of the gene to be tested appears, and the Ct value is less than 38, it is judged as positive. If 38<Ct<40, it is judged to be suspicious, and the amount of template is suspected to be increased. Repeat amplification, if it is the same experimental result, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
从图4可以看出,2份伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体的基因组DNA样品各10次重复都能扩增出反应曲线,其Ct都小于38,判断为阳性,由此说明,本发明的荧光检测引物能够同时检测出伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体,并且重复性好。 It can be seen from Fig. 4 that the genomic DNA samples of two Aedes type A, Aedes type B and Culex bacillus can amplify the reaction curve for 10 times, and the Ct is less than 38, which is judged as Positive, thereby indicating that the fluorescent detection primer of the present invention can simultaneously detect Aedes type A, Aedes type B and Culex pipiens, and has good repeatability.
实施例3:特异性Example 3: Specificity
1、两只含单A型的沃尔巴克氏体、两只含单B型的沃尔巴克氏体的白纹伊蚊和两只广州致倦库蚊(含库蚊沃尔巴克氏体),共6只蚊子经二氧化碳熏晕后,解剖腹部分别置于0.2ul EP管中;1. Two Wolbachia containing a single type A, two Aedes aegypti with a single B type, and two Culex pipiens pallens (including Culex boswellii) After a total of 6 mosquitoes were smoked by carbon dioxide, the anatomical abdomen was placed in a 0.2 ul EP tube;
2、分别加入20ul DNA提取液(DNA提取液的配方为:30mM NaOH、0.25mM EDTA、15mMTris-HCl,溶剂为水,使用前需振荡,将白色片状物一同加入);2. Add 20 ul of DNA extract respectively (the formula of DNA extract is: 30 mM NaOH, 0.25 mM EDTA, 15 mM Tris-HCl, the solvent is water, shake it before use, and add white flakes together);
3、充分混匀;3, fully mix;
4、瞬时离心后,99℃温浴10分钟;4. After transient centrifugation, warm bath at 99 ° C for 10 minutes;
5、得到DNA抽提液,-20℃保存,即分别获得两份伊蚊A型沃尔巴克氏体的基因组DNA、两份伊蚊B型沃尔巴克氏体的基因组DNA和两份库蚊沃尔巴克氏体的基因组DNA共六份,以这六份基因组DNA分别作为模板DNA进行PCR扩增。5. Obtain the DNA extract and store at -20 °C, that is, obtain two genomic DNAs of A. sinensis type A Wolbachia, two genomic DNAs of Aedes B type Wolbachia and two Culex pipiens A total of six genomic DNAs of Wolbachia were used for PCR amplification using these six genomic DNAs as template DNA, respectively.
6、6,
PCR组1:PCR group 1:
模板DNA 2μl、PCR A液18μl和PCR B液2μl。2 μl of template DNA, 18 μl of PCR A solution and 2 μl of PCR B solution.
所述的PCR A液,每18μl含有10pmol荧光检测引物wAlbAF(5’-CAGGGTTGATGTTGAAGGAG-3’)、10pmol荧光检测引物wAlbAR(5’-GCACCAGCTTTTACTTGACC-3’)、5pmol探针A(5’-TATCTTCAATTGCTATATCGTAATAAACG-3’,探针的两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1),其余为pH值为8.0的缓冲液。所述的缓冲液成份为50mmol/L Tris-HCl、8mmol/L MgCl2、250mmol/L KCl,溶剂为水。The PCR A solution contains 10 pmol of fluorescent detection primer wAlbAF (5'-CAGGGTTGATGTTGAAGGAG-3'), 10 pmol of fluorescent detection primer wAlbAR (5'-GCACCAGCTTTTACTTGACC-3'), and 5 pmol of probe A (5'-TATCTTCAATTGCTATATCGTAATAAACG- per 18 μl) 3', both ends of the probe are combined with a fluorescent generating group FAM and a fluorescent quenching group BHQ1), and the rest are buffers having a pH of 8.0. The buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
所述的PCR B液由热启动Taq酶、逆转录酶、dNTPs组成,每2μl PCR B液中含有热启动Taq酶5U、逆转录酶2.5U和dNTPs 10mmol,其余为水。The PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 μl of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
PCR组2:PCR group 2:
模板DNA 2μl、PCR A液18μl和PCR B液2μl。2 μl of template DNA, 18 μl of PCR A solution and 2 μl of PCR B solution.
所述的PCR A液,每18μl含有10pmol荧光检测引物wAlbBF(5’-AAAGGAACCGAAGTTCATGAT-3’)、10pmol荧光检测引物wAlbBR(5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’)、5pmol探针B(5’-CAACATTTGCTCCAACAACTGTTGC-3’,探针的两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1),其余为pH值为8.0的缓冲液。所述的缓冲液成份为50mmol/L Tris-HCl、8mmol/L MgCl2、250mmol/L KCl,溶剂 为水。The PCR A solution contains 10 pmol of fluorescent detection primer wAlbBF (5'-AAAGGAACCGAAGTTCATGAT-3'), 10 pmol of fluorescent detection primer wAlbBR (5'-TTGTTTAGTTGTGAGTAAAGTCCC-3'), and 5 pmol of probe B (5'-CAACATTTGCTCCAACAACTGTTGC- per 18 μl) 3', both ends of the probe are combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1), and the rest are buffers having a pH of 8.0. The buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
所述的PCR B液由热启动Taq酶、逆转录酶、dNTPs组成,每2μl PCR B液中含有热启动Taq酶5U、逆转录酶2.5U和dNTPs 10mmol,其余为水。The PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 μl of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
PCR组3:PCR group 3:
模板DNA 2μl、PCR A液18μl和PCR B液2μl。2 μl of template DNA, 18 μl of PCR A solution and 2 μl of PCR B solution.
所述的PCR A液,每18μl含有10pmol荧光检测引物wPipF(5’-GTTTGTGCAGCTAATAG-3’)、10pmol荧光检测引物wPipR(5’-GTCTGCAAGGCCTATTTCTACTG-3’)、5pmol探针C(5’-CTTTCAATTGAAAAGATTCGATCAAC-3’,探针的两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2),其余为pH值为8.0的缓冲液。所述的缓冲液成份为50mmol/L Tris-HCl、8mmol/L MgCl2、250mmol/L KCl,溶剂为水。The PCR A solution contains 10 pmol of fluorescent detection primer wPipF (5'-GTTTGTGCAGCTAATAG-3'), 10 pmol of fluorescent detection primer wPipR (5'-GTCTGCAAGGCCTATTTCTACTG-3'), and 5 pmol of probe C (5'-CTTTCAATTGAAAAGATTCGATCAAC- per 18 μl) 3', the two ends of the probe are respectively combined with a fluorescent generating group Texas Red and a fluorescence quenching group BHQ2), and the rest are buffers having a pH of 8.0. The buffer component was 50 mmol/L Tris-HCl, 8 mmol/L MgCl 2 , 250 mmol/L KCl, and the solvent was water.
所述的PCR B液由热启动Taq酶、逆转录酶、dNTPs组成,每2μl PCR B液中含有热启动Taq酶5U、逆转录酶2.5U和dNTPs 10mmol,其余为水。The PCR B solution consists of a hot-start Taq enzyme, a reverse transcriptase, and dNTPs, and each 2 μl of the PCR B solution contains a hot-start Taq enzyme 5 U, a reverse transcriptase 2.5 U, and dNTPs 10 mmol, and the rest is water.
8、混匀后进行PCR扩增;8. After mixing, perform PCR amplification;
9、PCR反应条件:9, PCR reaction conditions:
预变性  50℃  2minPre-denaturation 50 ° C 2 min
        95℃  15min95 ° C 15 min
扩增    94℃  15sAmplification 94 ° C 15s
        55℃  45s  40个循环,55℃时收集荧光55 ° C 45s 40 cycles, collecting fluorescence at 55 ° C
10、扩增结束后观察扩增曲线。10. Observe the amplification curve after the end of amplification.
具体结果如图5、图6、图7、图8、图9和图10所示,结果判断标准:如果出现待测基因的扩增反应曲线,且Ct值小于38,则判断为阳性,如果38<Ct<40,判断为可疑,可疑加大模板量,重复扩增,如果得到相同的实验结果,则判断为阳性,否则为阴性,如果Ct值为0或40,则判断为阴性。The specific results are shown in Fig. 5, Fig. 6, Fig. 7, Fig. 8, Fig. 9 and Fig. 10, and the result judgment criterion is: if the amplification reaction curve of the gene to be detected appears, and the Ct value is less than 38, it is judged to be positive if 38<Ct<40, judged to be suspicious, suspiciously increased the amount of template, repeated amplification, if the same experimental result is obtained, it is judged as positive, otherwise it is negative, if the Ct value is 0 or 40, it is judged to be negative.
从图5和图6可以看出,FAM通道(只用针对伊蚊A型沃尔巴克氏体的荧光检测引物wAlbAF、wAlbAR和探针A,PCR组1)只显示伊蚊A型沃尔巴克氏体的扩增曲线,其为阳性,而B型沃尔巴克氏体和库蚊沃尔巴克氏体都没有扩增曲线,为阴性。As can be seen from Fig. 5 and Fig. 6, the FAM channel (only for the Aedes type A Wolbachia fluorescent detection primers wAlbAF, wAlbAR and probe A, PCR group 1) only shows Aedes type A Wolbach The austenite amplification curve is positive, while both B-type Wolbachia and Culex pipiens have no amplification curve and are negative.
从图7和图8可以看出,HEX通道(只用针对伊蚊B型沃尔巴克氏体的荧光检测引物 wAlbBF、wAlbBR和探针B,PCR组2)只显示伊蚊B型沃尔巴克氏体的扩增曲线,其为阳性,而A型沃尔巴克氏体和库蚊沃尔巴克氏体都没有扩增曲线,为阴性。As can be seen from Figure 7 and Figure 8, the HEX channel (only for fluorescence detection primers for Aedes B-type Wolbachia) wAlbBF, wAlbBR and probe B, PCR group 2) only shows the amplification curve of Aedes B type Wolbachia, which is positive, while neither type A Wolbachia nor C. sinensis Wolbachia The amplification curve was negative.
从图9和图10可以看出,Texas Red通道(只用针对库蚊沃尔巴克氏体的荧光检测引物wPipF、wPipR和探针C,PCR组3)只显示库蚊沃尔巴克氏体的扩增曲线,其为阳性,而A型沃尔巴克氏体和B型沃尔巴克氏体都没有扩增曲线,为阴性。As can be seen from Fig. 9 and Fig. 10, the Texas Red channel (only for the fluorescence detection primers for Culex pipa, wPipF, wPipR and probe C, PCR group 3) only shows the mosquitoes of Volkswagen The amplification curve was positive, while both type A Wolbachia and B-type Wolbachia had no amplification curve and were negative.
由此说明,本发明的荧光检测引物能检测出伊蚊A、伊蚊B型沃尔巴克氏体和库蚊沃尔巴克氏体,并能分辨出伊蚊A型、伊蚊B型沃尔巴克氏体和库蚊沃尔巴克氏体。 Therefore, the fluorescent detection primer of the present invention can detect Aedes A, Aedes B type Wolbachia and Culex pipiens, and can distinguish Aedes type A and Aedes type B Wall Bark's body and Culex pipiens.
Figure PCTCN2016084213-appb-000001
Figure PCTCN2016084213-appb-000001
Figure PCTCN2016084213-appb-000002
Figure PCTCN2016084213-appb-000002

Claims (4)

  1. 一种三种沃尔巴克氏体的荧光检测引物,其特征在于,包括A three-volume detection primer for Wolbachia, characterized in that it comprises
    (1)针对伊蚊A型沃尔巴克氏体:(1) For Aedes type A Wolbachia:
    wAlbAF:5’-CAGGGTTGATGTTGAAGGAG-3’;wAlbAF: 5'-CAGGGTTGATGTTGAAGGAG-3';
    wAlbAR:5’-GCACCAGCTTTTACTTGACC-3’;wAlbAR: 5'-GCACCAGCTTTTACTTGACC-3';
    探针A:5’-TATCTTCAATTGCTATATCGTAATAAACG-3’;Probe A: 5'-TATCTTCAATTGCTATATCGTAATAAACG-3';
    探针A两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1;The two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
    (2)针对伊蚊B型沃尔巴克氏体:(2) For Aedes B type Wolbachia:
    wAlbBF:5’-AAAGGAACCGAAGTTCATGAT-3’;wAlbBF: 5'-AAAGGAACCGAAGTTCATGAT-3';
    wAlbBR:5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’;wAlbBR: 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3';
    探针B:5’-CAACATTTGCTCCAACAACTGTTGC-3’;Probe B: 5'-CAACATTTGCTCCAACAACTGTTGC-3';
    探针B两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1;The two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
    (3)针对库蚊沃尔巴克氏体:(3) For Culex mosquitoes:
    wPipF:5’-GTTTGTGCAGCTAATAG-3’;wPipF: 5'-GTTTGTGCAGCTAATAG-3';
    wPipR:5’-GTCTGCAAGGCCTATTTCTACTG-3’;wPipR: 5'-GTCTGCAAGGCCTATTTCTACTG-3';
    探针C:5’-CTTTCAATTGAAAAGATTCGATCAAC-3’;Probe C: 5'-CTTTCAATTGAAAAGATTCGATCAAC-3';
    探针C两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2。Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
  2. 一种非疾病的诊断和治疗目的的三种沃尔巴克氏体的检测方法,其特征在于,提取样品DNA,以该样品DNA为模板,以权利要求1所述的三种沃尔巴克氏体的荧光检测引物wAlbAF、wAlbAR、探针A、wAlbBF、wAlbBR、探针B、wPipF、wPipR和探针C进行荧光定量PCR扩增,扩增反应完成后,根据探针标记的荧光发生基团的荧光信号,读取并记录样品的PCR循环次数Ct,根据样品的Ct值,按照建立的判断标准,判断样品是否含有伊蚊A型、伊蚊B型和库蚊沃尔巴克氏体。A method for detecting Wolbachia for non-disease diagnosis and treatment purposes, characterized in that sample DNA is extracted, the sample DNA is used as a template, and the three Wolbachias according to claim 1 The fluorescent detection primers wAlbAF, wAlbAR, probe A, wAlbBF, wAlbBR, probe B, wPipF, wPipR and probe C are subjected to real-time PCR amplification, and after completion of the amplification reaction, the fluorescent-generating group is labeled according to the probe. Fluorescence signal, read and record the number of PCR cycles of the sample Ct, according to the Ct value of the sample, according to the established judgment criteria, determine whether the sample contains Aedes type A, Aedes type B and Culex bacillus.
  3. 根据权利要求2所述的检测方法,其特征在于,所述的进行荧光定量PCR扩增,其反应条件为:预变性50℃5分钟,95℃15分钟;扩增94℃15秒、55℃45秒,40个循环;55℃的时候收集荧光信号。The detection method according to claim 2, wherein the fluorescence quantitative PCR amplification is carried out under the following conditions: pre-denaturation at 50 ° C for 5 minutes, 95 ° C for 15 minutes; amplification at 94 ° C for 15 seconds, 55 ° C. 45 seconds, 40 cycles; collect fluorescent signal at 55 °C.
  4. 一种三种沃尔巴克氏体的检测试剂盒,包括荧光检测引物和PCR试剂,其特征在于,所述的荧光检测引物包括:A test kit for three Wolbachia, comprising a fluorescent detection primer and a PCR reagent, wherein the fluorescent detection primer comprises:
    (1)针对伊蚊A型沃尔巴克氏体: (1) For Aedes type A Wolbachia:
    wAlbAF:5’-CAGGGTTGATGTTGAAGGAG-3’;wAlbAF: 5'-CAGGGTTGATGTTGAAGGAG-3';
    wAlbAR:5’-GCACCAGCTTTTACTTGACC-3’;wAlbAR: 5'-GCACCAGCTTTTACTTGACC-3';
    探针A:5’-TATCTTCAATTGCTATATCGTAATAAACG-3’;Probe A: 5'-TATCTTCAATTGCTATATCGTAATAAACG-3';
    探针A两端分别结合有荧光发生基团FAM和荧光淬灭基团BHQ1;The two ends of the probe A are respectively combined with a fluorescence generating group FAM and a fluorescence quenching group BHQ1;
    (2)针对伊蚊B型沃尔巴克氏体:(2) For Aedes B type Wolbachia:
    wAlbBF:5’-AAAGGAACCGAAGTTCATGAT-3’;wAlbBF: 5'-AAAGGAACCGAAGTTCATGAT-3';
    wAlbBR:5’-TTGTTTAGTTGTGAGTAAAGTCCC-3’;wAlbBR: 5'-TTGTTTAGTTGTGAGTAAAGTCCC-3';
    探针B:5’-CAACATTTGCTCCAACAACTGTTGC-3’;Probe B: 5'-CAACATTTGCTCCAACAACTGTTGC-3';
    探针B两端分别结合有荧光发生基团HEX和荧光淬灭基团BHQ1;The two ends of the probe B are respectively combined with a fluorescence generating group HEX and a fluorescence quenching group BHQ1;
    (3)针对库蚊沃尔巴克氏体:(3) For Culex mosquitoes:
    wPipF:5’-GTTTGTGCAGCTAATAG-3’;wPipF: 5'-GTTTGTGCAGCTAATAG-3';
    wPipR:5’-GTCTGCAAGGCCTATTTCTACTG-3’;wPipR: 5'-GTCTGCAAGGCCTATTTCTACTG-3';
    探针C:5’-CTTTCAATTGAAAAGATTCGATCAAC-3’;Probe C: 5'-CTTTCAATTGAAAAGATTCGATCAAC-3';
    探针C两端分别结合有荧光发生基团Texas Red和荧光淬灭基团BHQ2。 Both ends of the probe C are bound to a fluorescence generating group Texas Red and a fluorescence quenching group BHQ2, respectively.
PCT/CN2016/084213 2015-06-11 2016-05-31 Fluorescence detection primers of three types of wolbachia and detection method and detection kit thereof WO2016197837A1 (en)

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CN102382898A (en) * 2011-12-07 2012-03-21 广州沃巴克生物科技有限公司 Primer for quickly and quantitatively detecting Wolbachia in tissues of mosquito and reagent box and method thereof

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CALVITTI, M. ET AL.: "Wolbachia Density and Cytoplasmic Incompatibility in Aedes Albopictus: Concerns with Using Artificial Wolbachia Infection as a Vector Suppression Tool", PLOS ONE, vol. 10, no. 3, 26 March 2015 (2015-03-26), XP055333462 *

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