WO2016165762A1 - Drug conjugates comprising antibodies against claudin 18.2 - Google Patents

Drug conjugates comprising antibodies against claudin 18.2 Download PDF

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Publication number
WO2016165762A1
WO2016165762A1 PCT/EP2015/058206 EP2015058206W WO2016165762A1 WO 2016165762 A1 WO2016165762 A1 WO 2016165762A1 EP 2015058206 W EP2015058206 W EP 2015058206W WO 2016165762 A1 WO2016165762 A1 WO 2016165762A1
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WIPO (PCT)
Prior art keywords
antibody
binding
amino acid
cancer
acid sequence
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PCT/EP2015/058206
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French (fr)
Inventor
Ugur Sahin
Özlem TÜRECI
Korden Walter
Maria Kreuzberg
Rita Mitnacht-Kraus
Fabrice Le Gall
Stefan Jacobs
Original Assignee
Ganymed Pharmaceuticals Ag
Tron - Translationale Onkologie An Der Universitätsmedizin Der Johannes Gutenberg-Universität Mainz Ggmbh
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Application filed by Ganymed Pharmaceuticals Ag, Tron - Translationale Onkologie An Der Universitätsmedizin Der Johannes Gutenberg-Universität Mainz Ggmbh filed Critical Ganymed Pharmaceuticals Ag
Priority to PCT/EP2015/058206 priority Critical patent/WO2016165762A1/en
Priority to LTEPPCT/EP2016/058056T priority patent/LT3283521T/en
Priority to CN201680021997.6A priority patent/CN107667118A/en
Priority to CA2982401A priority patent/CA2982401C/en
Priority to MDE20180164T priority patent/MD3283521T2/en
Priority to JP2017552461A priority patent/JP6800883B2/en
Priority to SG11201708271TA priority patent/SG11201708271TA/en
Priority to MX2017013075A priority patent/MX2017013075A/en
Priority to DK16715583.7T priority patent/DK3283521T5/en
Priority to HRP20231609TT priority patent/HRP20231609T1/en
Priority to KR1020247001267A priority patent/KR20240011250A/en
Priority to SG10202105142VA priority patent/SG10202105142VA/en
Priority to EP23209136.3A priority patent/EP4331578A3/en
Priority to KR1020177029588A priority patent/KR102336566B1/en
Priority to RU2017139490A priority patent/RU2017139490A/en
Priority to SI201631779T priority patent/SI3283521T1/en
Priority to IL314928A priority patent/IL314928A/en
Priority to RU2021131990A priority patent/RU2021131990A/en
Priority to UAA201711145A priority patent/UA127469C2/en
Priority to BR112017018521A priority patent/BR112017018521A2/en
Priority to KR1020217039609A priority patent/KR102401299B1/en
Priority to US15/565,848 priority patent/US11541127B2/en
Priority to IL254085A priority patent/IL254085B1/en
Priority to PL16715583.7T priority patent/PL3283521T3/en
Priority to ES16715583T priority patent/ES2964813T3/en
Priority to KR1020227016552A priority patent/KR102626316B1/en
Priority to MX2023013476A priority patent/MX2023013476A/en
Priority to EP16715583.7A priority patent/EP3283521B1/en
Priority to RS20231193A priority patent/RS64951B1/en
Priority to PT167155837T priority patent/PT3283521T/en
Priority to HUE16715583A priority patent/HUE064753T2/en
Priority to PCT/EP2016/058056 priority patent/WO2016166122A1/en
Priority to MA41937A priority patent/MA41937B1/en
Priority to AU2016249782A priority patent/AU2016249782B2/en
Priority to FIEP16715583.7T priority patent/FI3283521T3/en
Publication of WO2016165762A1 publication Critical patent/WO2016165762A1/en
Priority to ZA2017/05923A priority patent/ZA201705923B/en
Priority to HK18106396.7A priority patent/HK1247210A1/en
Priority to JP2020195120A priority patent/JP7024152B2/en
Priority to JP2021210851A priority patent/JP2022031979A/en
Priority to US18/062,494 priority patent/US20230270878A1/en
Priority to JP2024012973A priority patent/JP2024036444A/en

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    • A—HUMAN NECESSITIES
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    • A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
    • A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
    • A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
    • A61K47/6835—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site
    • A61K47/6851—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a determinant of a tumour cell
    • A61K47/6859—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a determinant of a tumour cell the tumour determinant being from liver or pancreas cancer cell
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    • A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
    • A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
    • A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
    • A61K47/6801—Drug-antibody or immunoglobulin conjugates defined by the pharmacologically or therapeutically active agent
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    • A61K31/33—Heterocyclic compounds
    • A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
    • A61K31/40—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having five-membered rings with one nitrogen as the only ring hetero atom, e.g. sulpiride, succinimide, tolmetin, buflomedil
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    • A61K47/6801—Drug-antibody or immunoglobulin conjugates defined by the pharmacologically or therapeutically active agent
    • A61K47/6803—Drugs conjugated to an antibody or immunoglobulin, e.g. cisplatin-antibody conjugates
    • A61K47/68031—Drugs conjugated to an antibody or immunoglobulin, e.g. cisplatin-antibody conjugates the drug being an auristatin
    • A—HUMAN NECESSITIES
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    • A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
    • A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
    • A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
    • A61K47/6801—Drug-antibody or immunoglobulin conjugates defined by the pharmacologically or therapeutically active agent
    • A61K47/6803—Drugs conjugated to an antibody or immunoglobulin, e.g. cisplatin-antibody conjugates
    • A61K47/68033—Drugs conjugated to an antibody or immunoglobulin, e.g. cisplatin-antibody conjugates the drug being a maytansine
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    • A61K47/51—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent
    • A61K47/68—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment
    • A61K47/6835—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site
    • A61K47/6849—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a receptor, a cell surface antigen or a cell surface determinant
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    • A61K47/50—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
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    • A61K47/6835—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site
    • A61K47/6851—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a determinant of a tumour cell
    • A61K47/6863—Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being an antibody, an immunoglobulin or a fragment thereof, e.g. an Fc-fragment the modifying agent being an antibody or an immunoglobulin bearing at least one antigen-binding site the antibody targeting a determinant of a tumour cell the tumour determinant being from stomach or intestines cancer cell
    • A—HUMAN NECESSITIES
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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/30—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells
    • C07K16/303—Liver or Pancreas
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K16/00—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/18—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans
    • C07K16/28—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
    • C07K16/30—Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants from tumour cells
    • C07K16/3046—Stomach, Intestines
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    • A61K2039/505—Medicinal preparations containing antigens or antibodies comprising antibodies
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    • A61K2039/62—Medicinal preparations containing antigens or antibodies characterised by the link between antigen and carrier
    • A61K2039/627—Medicinal preparations containing antigens or antibodies characterised by the link between antigen and carrier characterised by the linker
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K2317/00—Immunoglobulins specific features
    • C07K2317/20—Immunoglobulins specific features characterized by taxonomic origin
    • C07K2317/24—Immunoglobulins specific features characterized by taxonomic origin containing regions, domains or residues from different species, e.g. chimeric, humanized or veneered
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K2317/00—Immunoglobulins specific features
    • C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
    • C07K2317/73—Inducing cell death, e.g. apoptosis, necrosis or inhibition of cell proliferation
    • C07K2317/732—Antibody-dependent cellular cytotoxicity [ADCC]
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
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    • C07K2317/00—Immunoglobulins specific features
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    • C07K2317/73—Inducing cell death, e.g. apoptosis, necrosis or inhibition of cell proliferation
    • C07K2317/734—Complement-dependent cytotoxicity [CDC]
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    • C07—ORGANIC CHEMISTRY
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    • C07K2317/00—Immunoglobulins specific features
    • C07K2317/70—Immunoglobulins specific features characterized by effect upon binding to a cell or to an antigen
    • C07K2317/77—Internalization into the cell
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K2317/00—Immunoglobulins specific features
    • C07K2317/90—Immunoglobulins specific features characterized by (pharmaco)kinetic aspects or by stability of the immunoglobulin
    • C07K2317/92—Affinity (KD), association rate (Ka), dissociation rate (Kd) or EC50 value

Definitions

  • mABs Monoclonal antibodies
  • a critical feature of mABs is their high specificity and their ability to target tumor cells, marking them for immune-effector mediated cell killing (complement-dependent cytotoxicity (CDC), antibody- dependent cellular cytotoxicity (ADCC)) and/or leading to reduced proliferation and apoptosis (Kubota, T. et al. (2009) Cancer Sci. 100 (9), 1566-1572).
  • Conjugation to cytotoxic drugs can expand the utility of mABs and improve their potency and effectiveness (Goldmacher, V. S. et al. (2011) Ther. Deliv. 2 (3), 397-416; Sievers, E. L. (2013) Annu. Rev. Med. 64, 15-29).
  • cytotoxic drugs for the treatment of cancer has centered on chemotherapies that target dividing cancer cells. These compounds do not only target cancer cells but also other dividing healthy cells in the body, and patients receiving treatment experience severe side effects that limit the dose.
  • the therapeutic index maximal tolerated dose/minimum efficacious dose
  • the therapeutic index is low, resulting in a narrow therapeutic window (Ismael, G. F. V. et al. (2008) Cancer Treat Rev. 34 (1), 81-91).
  • antibodies can be used to deliver the cytotoxic drug specifically to the tumor.
  • ADCs antibody-drug conjugates
  • ADCs are designed to kill cancer cells in a target-dependent manner.
  • the first step in this process is binding of the antibody to its antigen.
  • the entire antigen-ADC complex is internalized and the cytotoxic payload is released into the tumor cell resulting in cell death.
  • Factors that influence the therapeutic index for ADCs include the antibody, the tumor target antigen, the cytotoxic drug and the linker (Panowksi, S. et al. (2014) MAbs 6 (1), 34-45).
  • the tumor target antigen has to be localized on the cell surface and accessible to the circulating antibody. Furthermore, the tumor selectivity and the expression level of the target antigen are critical parameters for the design of safe and efficacious ADCs.
  • Currently, a variety of tumor-associated cell surface antigens are being evaluated as ADC targets for cancer therapy (Trail, P. A. (2013) Antibodies 2 (1), 113-129; Teicher, B. A. (2009) Curr. Cancer Drug Targets 9 (8), 982-1004).
  • ADC efficiency of an ADC also depends on the cytotoxic drug. As the amount of an antibody that localizes to a tumor is very small compared to the administered dose, toxic compounds with sub-nanomolar potency are required. Auristatins and maytansinoids are two classes of highly potent cytotoxins currently used in ADC development (Trail, P. A. (2013) Antibodies 2 (1), 113-129). Both are antimitotic agents blocking the polymerization of tubulin causing cell death by a G2/M phase cell cycle arrest (Lopus, M. et al. (2010) Mol. Cancer Ther. 9 (10), 2689-2699; Francisco, J. A et al. (2003) Blood 102 (4), 1458-1465).
  • linker In addition to the specificity of the mAB and potency of the drug, the linker is an important element in ADC development.
  • the linker should be stable to exploit the pharmacokinetic half-life of the mAB and should not release the cytotoxic drug until antigen-mediated internalization.
  • Linkers can be classified by their mechanism of drug release: Cleavable linkers release the drug by hydrolysis or enzymatic cleavage following antigen-specific internalization whereas non- cleavable linkers, release the drug via degradation of the mAB in lysosomes following internalization (Dosio, F. et al. (2011) Toxins (Basel) 3 (7), S. 848-883).
  • membrane permeable (lipophilic) toxins mat are released inside target positive cells can pass the cell membrane and kill other cells that are in close proximity, including neighboring cancer cells that lack antigen expression (bystander effect) (Kovtun, Y. V. et al. (2006) Cancer Res. 66 (6), 3214-3221).
  • the ability of these cytotoxic drugs to mediate local bystander killing is an important selection criteria for those ADCs directed against antigens that are heterogeneously expressed in tumors.
  • CLDN18.2 The tight junction molecule claudin 18 isotype 2 (CLDN18.2) is a cancer-associated splice variant of Claudin 18.
  • CLDN18.2 is a 27.8 kDa transmembrane protein comprising four membrane spanning domains with two small extracellular loops (loopl embraced by hydrophobic region 1 and hydrophobic region 2; loop2 embraced by hydrophobic regions 3 and 4).
  • CLDN18.2 is a highly selective gastric lineage antigen, exclusively expressed on short-lived differentiated gastric epithelial cells and not detectable in any other normal human tissue.
  • the antigen is ectopically expressed at significant levels in a diversity of human cancers including gastroesophageal and pancreatic cancer (Sahin, U., et al., Clin Cancer Res, 2008. 14(23): p. 7624-34).
  • the CLDN18.2 protein is also frequently detected in lymph node metastases of gastric cancer and in distant metastases. CLDN18.2 seems to be involved in proliferation of CLDN18.2 positive tumor cells, since down regulation of the target by siRNA technology results in inhibition of proliferation of gastric cancer cells.
  • IMAB362 is a chimeric monoclonal antibody of IgGl subtype directed against CLDN18.2.
  • HMAB362 recognizes the first extracellular domain of CLDN18.2 with high affinity and specificity and does not bind to any other claudin family member including the closely related splice variant 1 of Claudin 18 (CLDN18.1).
  • CLDN18.1 the closely related splice variant 1 of Claudin 18
  • survival benefit and tumor regressions have been observed in mice after administration of IMAB362.
  • no toxicity in gastric tissue is observed as the target epitope is not accessible.
  • the tumor target becomes accessible for IMAB362 during malignant transformation.
  • IMAB362 bundles four independent highly potent mechanisms of action: (i) antibody-dependent cellular cytotoxicity (ADCC), (ii) complement-dependent cytotoxicity (CDC), (iii) induction of apoptosis induced by cross linking of the target at the tumor surface and (iv) direct inhibition of proliferation.
  • ADCC antibody-dependent cellular cytotoxicity
  • CDC complement-dependent cytotoxicity
  • iii induction of apoptosis induced by cross linking of the target at the tumor surface and (iv) direct inhibition of proliferation.
  • CLDN18.2 has a restricted expression pattern in normal cells and, thus, appears to be an ideal target for antibody-directed therapy of cancer expressing CLDN18.2. Accordingly, there is a need for a therapy directed against CLDN18.2-expressing cancer cells that is capable of exerting a clinically useful cytotoxic or cytostatic effect on CLDN18.2- expressing cells, particularly without exerting undesirable effects on non-CLDNl 8.2- expressing cells.
  • the therapy should not be associated with disadvantages and undesirable side effects commonly associated with approaches that have been used for increasing the therapeutic efficacy of antibodies such as radiolabeling and combination with chemotherapy.
  • isotope therapy is associated with myelosuppression
  • combination therapy with antibodies and chemotherapeutics is associated with immunosuppression
  • isotopically labeled substances are difficult to produce, and patients often experience relapse after initial treatment with isotopically labeled substances.
  • the present invention demonstrates the existence of anti-CLDN18.2 monoclonal antibodies that can be highly efficiently internalized upon CLDN18.2 binding on CLND18.2-expressing cells and therefore are suitable for ADC development.
  • the successful conjugation of such antibodies to the drugs DM4 and MMAE using cleavable SPDB or Val- Cit (vc) linkers, respectively, is disclosed.
  • the antibody conjugates reduce viability of gastric and pancreatic cancer cells expressing CLDN18.2.
  • IMAB362-vcMMAE and EMAB362-DM4 do not bind to or influence viability of CLDN18.2 negative cells.
  • Both, the DM4 and vcMMAE conjugates exert bystander killing effects on CLDN18.2 negative cancer cells co-cultured with CLDN18.2 positive cancer cells in vitro.
  • intravenous administration of the antibody conjugates in nude mice with CLDN18.2-positive gastric or pancreatic xenograft tumors results in dose-dependent tumor growth inhibition, survival benefit and even complete regression of early and advanced tumors.
  • anti-CLDN18.2 antibody-drug conjugates such as those described herein are highly potent drugs for the treatment of CLDN18.2-positive human carcinomas such as gastric and pancreatic carcinomas.
  • the present invention generally provides a therapy for effectively treating and/or preventing cancer associated with cells expressing CLDN18.2 such as gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancer of the gallbladder and metastases thereof, in particular gastric cancer metastasis such as Krukenberg tumors, peritoneal metastasis and lymph node metastasis.
  • Particularly preferred cancer diseases are adenocarcinomas of the stomach, the esophagus, the pancreatic duct, the bile ducts, the lung and the ovary.
  • the present invention provides a method of treating or preventing a CLDN18.2- expressing cancer comprising administering an antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety to a cancer patient.
  • the antibody-drug conjugate is internalized into cells following binding to CLDN18.2 expressed by the cells.
  • the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2. In one embodiment, the antibody-drug conjugate specifically binds to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 is a monoclonal, chimeric or humanized antibody, or a fragment of an antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody.
  • the antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i).
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment.
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment.
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN 18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain compris
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN 18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN 18.2.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: IS or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • An antibody which competes with a second antibody for binding to a target preferably is antagonistic to said second antibody.
  • the toxin drug moiety is cell membrane-permeable. In one embodiment, the toxin drug moiety is a cytotoxic or cytostatic agent. In one embodiment, the toxin drug moiety is a maytansinoid or an auristatin. In one embodiment, the maytansinoid is selected from the group consisting of DM1 and DM4. In one embodiment, the auristatin is selected from the group consisting of monomethyl auristatin E (MMAE) and monomethyl auristatin F (MMAF).
  • MMAE monomethyl auristatin E
  • MMAF monomethyl auristatin F
  • the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker.
  • the linker is a cleavable linker.
  • the linker is cleavable under intracellular conditions.
  • the linker is hydrolyzable at a pH of less than 5.5.
  • the linker is cleavable by an intracellular protease.
  • the linker is a cathepsin- cleavable linker.
  • the linker comprises a dipeptide.
  • the dipeptide is val-cit or phe-lys.
  • the antibody is attached to the linker through a cysteine thiol of the antibody.
  • the antibody is attached to the linker through amine groups, in particular amine groups of lysine residues of the antibody.
  • the antibody-drug conjugate is administered in an amount effective for the treatment or prevention of the CLDN18.2-expressing cancer. In one embodiment, the antibody-drug conjugate is administered at a dose of between 3 to 30 mg/kg body weight, such as between 4 to 25, 5 to 20, 10 to 18, or IS to 16 mg/kg body weight. In one embodiment, the antibody-drug conjugate is administered at a dose of between 8 to ISO, 9 to 100 or 9 to 90 mg/m 2 body surface of a human patient, such as between 12 to 75, IS to 60, 30 to 54, or 45 to 48 mg/m 2 body surface of a human patient. In one embodiment, a single dose of the antibody-drug conjugate or two or more doses of the antibody-drug conjugate are administered. In one embodiment, the antibody-drug conjugate is administered by intravenous injection.
  • the method of the invention further comprises administering surgery, chemotherapy and/or radiation therapy.
  • expression of CLDN18.2 is at the cell surface of cancer cells.
  • the cancer is an adenocarcinoma, in particular an advanced adenocarcinoma.
  • the cancer is selected from the group consisting of gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), breast cancer, ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, cancer of the gallbladder and the metastasis thereof, a Krukenberg tumor, peritoneal metastasis and/or lymph node metastasis.
  • NSCLC non small cell lung cancer
  • the cancer is selected from the group consisting of cancer of the stomach, cancer of the esophagus, in particular the lower esophagus, cancer of the eso-gastric junction and gastroesophageal cancer.
  • the patient is a HER2/neu negative patient or a patient with HER2/neu positive status but not eligible to trastuzumab therapy.
  • CLDN18.2 has the amino acid sequence according to SEQ ID NO: 1.
  • the present invention provides an antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety.
  • the antibody-drug conjugate is internalized into cells following binding to CLDN18.2 expressed by the cells.
  • the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2. In one embodiment, the antibody-drug conjugate specifically binds to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 is a monoclonal, chimeric or humanized antibody, or a fragment of an antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells, hi one embodiment, the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i).
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment.
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment.
  • the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: IS or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN 18.2 -binding antibody for binding to CLDN18.2.
  • An antibody which competes with a second antibody for binding to a target preferably is antagonistic to said second antibody.
  • the toxin drug moiety is cell membrane-permeable. In one embodiment, the toxin drug moiety is a cytotoxic or cytostatic agent In one embodiment, the toxin drug moiety is a maytansinoid or an auristatin. In one embodiment, the maytansinoid is selected from the group consisting of DM1 and DM4. In one embodiment, the auristatin is selected from the group consisting of monomethyl auristatin E (MMAE) and monomethyl auristatin F (MMAF). In one embodiment, the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker. In one embodiment, the linker is a cleavable linker.
  • the linker is cleavable under intracellular conditions. In one embodiment, the linker is hydrolyzable at a pH of less than 5.5. In one embodiment, the linker is cleavable by an intracellular protease. In one embodiment, the linker is a cathepsin- cleavable linker. In one embodiment, the linker comprises a dipeptide. In one embodiment, the dipeptide is val-cit or phe-lys. In one embodiment, the antibody is attached to the linker through a cysteine thiol of the antibody. In one embodiment, the antibody is attached to the linker through amine groups, in particular amine groups of lysine residues of the antibody.
  • CLDN18.2 has the amino acid sequence according to SEQ ID NO: 1.
  • the present invention provides a pharmaceutical formulation comprising the antibody-drug conjugate of the invention, and a pharmaceutically acceptable diluent, carrier or excipient.
  • the present invention provides a medical preparation comprising the antibody-drug conjugate of the invention.
  • the medical preparation is present in the form of a kit comprising a container including the antibody-drug conjugate.
  • the medical preparation further includes printed instructions for use of the preparation in a method of treating or preventing cancer, in particular a CLDN18.2-expressing cancer.
  • the present invention provides the antibody-drug conjugate of the invention, the pharmaceutical composition of the invention or the medical preparation of the invention for use in therapy, in particular for use in a method of treating or preventing cancer, in particular a CLDN18.2-expressing cancer.
  • the method of treating or preventing cancer is a method of treating or preventing a CLDN18.2-expressing cancer of the invention.
  • Figure 2 Reduction of viability after co-incubation of HEK293-CLDN18.2 cells with chimeric anti-CLDN18.2 mAbs and Fab-ZAP (indirect evaluation of internalization).
  • Figure 3 Reduction of viability after co-incubation of HEK293-CLDN18.2 cells with murine anti-CLDN18.2 antibodies and Fab-ZAP (indirect evaluation of internalization).
  • HEK293-CLDN18.2 cells were incubated for 72 h with anti-CLDN18.2 reactive murine antibodies and saporin conjugated anti-mouse IgG Fab fragment (Fab-ZAP murine). Endocytosis of different anti-CLDN18.2 reactive murine antibodies was indirectly determined by measuring cell viability.
  • Figure 4 Relative binding affinities of IMAB362-DM4 and IMAB362-vcMMAE to CLDN18.2 positive cells.
  • Figure 5 CLDN18.2-mediated binding of ⁇ 362- ⁇ 4 and IMAB362-vcMMAE.
  • Figure 6 Binding specificities of IMAB362-DM4 and EVtAB362-vcMMAE.
  • Figure 7 Effect of EWAB362-DM4 and IMAB362-vcMMAE on viability of CLDN18J expressing human carcinoma cell lines.
  • IMAB362-DM4- and IMAB362-vcMMAE-mediated reduction of A) NUGC-4 10cF7-5 sort 3a, (B) NCI-N87-CLDN18.2 and (C) BxPC-3 ⁇ CLDN18.2 cell viability.
  • Figure 8 CLDN18.2 dependency of EVIAB362-vcMMAE mediated reduction of tumor cell viability .
  • IMAB362-vcMMA£-mediated reduction of cell viability was deteraiined on NCI-N87 cells (CLDN18.2 negative) and NCI-N87-CLDN18.2 cells ectopically expressing the target.
  • the cells were incubated for 72 h with IMAB 362- vcMMAE or unconjugated IMAB362 at concentrations up to 1687S ng/ml.
  • IMAB362 is known to have no activity under the experimental conditions used here.
  • Figure 9 Specificity of IMAB362-vcMMAE mediated reduction of cell viability.
  • IMAB362-DM4- and IMAB362-vcMMAE-mediated induction of bystander effects were determined in co-culture experiments using PA- 1 (Luc) cells (CLDN18.2 negative/luciferase positive) and NUGC-4 10cE8 cells (CLDN18.2 positive/luciferase negative).
  • PA-l(Luc) cells were incubated with either IMAB362-DM4- or IMAB362-vcMMAE.
  • cells were cultivated for 4 days in the presence of 200 ng/ml IMAB362-DM4, 800 ng/ml IMAB362-vcMMAE or 800 ng/ml IMAB362. Luciferase activity was measured.
  • Figure 11 Tumor growth inhibition of advanced BxPC-3 ⁇ CLDN18.2 xenograft tumors by IM AB362-DM4.
  • Figure 12 Mean body weight of mice treated with IMAB362-DM4.
  • the body weight of the 4 groups is presented as mean.
  • Group size n 5.
  • FIG. 13 Clinical chemistry parameters from the single and repeated dose administration of IMAB362-DM4 in xenograft nude mice- Clinical chemistry of BxPC-3 ⁇ CLDNl 8.2-tumor bearing female nude mice treated intravenously with a single dose of vehicle, 7.5 mg/kg, 15 mg/kg IMAB362-DM4 or a repeated dose of 15 mg/kg IMAB362-DM4 was analyzed on day 49 after engraftment A) Alanine transaminase (GPT), B) aspartate transaminase (GOT), C) glutamate dehydrogenase, D) alkaline phosphatase, E) a-amylase, F) cholinesterase, G) creatine kinase (CK), H) lactate dehydrogenase (LDH), I) lipase, J) urea, K) glucose, L) total protein and M) albumin.
  • Figure 14 Histological analysis of stomach sections from IMAB362-DM4
  • mice bearing BxPC-3 ⁇ CLDN18.2 xenograft tumors were treated with EMAB362-DM4.
  • mice On day 49 post-graft mice were sacrificed and selected organs dissected and formalin fixed. Sections of these FFPE tissue were stained with hematoxylin-eosin and examined microscopically for morphological alterations.
  • A, C Stomach tissues of a representative mouse from the treatment group with the highest IMAB362-DM4 exposure (IS mg/kg IMAB362-DM4 on day 14 and day 21 post-graft).
  • B, D Stomach tissue of mouse of the control group treated with the vehicle only. Magnification: see scale bar.
  • Figure 15 Tumor growth inhibition of advanced BxPC-3 ⁇ CLDN18.2 xenograft tumors IMAB362-vcMMAE.
  • Figure 16 Mean body weight of mice treated with IMAB362-vcMMAE.
  • the body weight of tumor bearing female nude mice treated with a single dose of vehicle control, 8 mg/kg or 16 mg/kg, or repeated doses of 16 mg/kg IMAB362-vcMMAE was monitored twice a week.
  • the body weight of the 4 groups is presented as mean.
  • Group size n 5.
  • Figure 17 Clinical chemistry parameters from the single and repeated dose administration of IMAB362-vcMMAE in xenograft nude mice.
  • Figure 18 Dose-dependent antt-tumoral efficacy of IMAB362-DM4 and IMAB362- vcMMAE in an advanced human NCI-N87 ⁇ CLDN18.2 gastric xenograft tumor model
  • NCI-N87-CLDN18.2 cells ectopically expressing human CLDN18.2 were engrafted subcutaneously into the flank of female nude mice.
  • mice On day 10 post engraftment, mice were organized into groups and injected intravenously with a single dose of vehicle, 3.8, 7.6 or 15.2 mg/kg IMAB362-DM4 or 4, 8 or 16 mg/kg IMAB362-vcMMAE on day 13.
  • Another control group received repeated doses of ⁇ 8 mg/kg IMAB362 twice a week by alternating IV and i.p. injections. Tumor volumes were measured two times a week. Animals were sacrificed when the tumor volume exceeded 1400 mm 3 or when the tumors ulcerated.
  • Figure 19 Antt-tumoral efficacy of IMAB362-DM4 and EMAB362-vcMMAE in an early human NUGC-4 10cF7-5 sort3a gastric xenograft tumor model.
  • NUGC-4 10cF7-5 sort3a cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 3, mice received vehicle, 15.2 mg/kg EMAB362-DM4 or 16 mg/kg IMAB362-vcMMAE by a single IV injection. Tumor volumes were measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm 3 or when the tumors ulcerated or after the pre-defined observation period of 120 days.
  • Figure 20 Dose-dependent antt-tumoral efficacy of IMAB362-DM4 and IMAB362- vcMMAE in an advanced human BxPC-3 ⁇ CLDN18.2 pancreatic xenograft tumor model.
  • BxPC-3 ⁇ CLDN18.2 cells ectopically expressing human CLDN18.2 were engrafted subcutaneously into the flank of female nude mice.
  • mice were organized into groups and injected intravenously with a single dose of vehicle, 3.8, 7.6 or 1S.2 mg/kg IMAB362-DM4 or 4, 8 or 16 mg/kg IMAB362-vcMMAE on day 14.
  • Mice from the antibody control group received ⁇ 8 mg/kg unconjugated IMAB362 two times a week by alternating IV and i.p. injections. Tumor size was measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm 3 or when the tumors ulcerated.
  • Figure 21 Anti-tumoral efficacy of IMAB362-DM4 and EVIAB362-vcMMAE in an early human DAN-G 1C5F2 pancreatic xenograft tumor model.
  • DAN-G 1CSF2 cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice.
  • mice were treated with a single IV injection of vehicle control, 1S.2 mg/kg IMAB362-DM4 or 16 mg/kg IMAB362-vcMMAE.
  • Tumor volumes were measured twice a week. Animals were sacrificed when the mice lost more than 10% body weight due to cancer cachexia, when the tumors ulcerated or after the pre-defined observation period of 120 days.
  • Statistical analysis of tumor growth was performed using Kruskal-Wallis and post-hoc Dunn Test.
  • Figure 22 Histological analysis of stomach sections from BMAB362-vcMMAE and vehicle treated mice.
  • mice bearing BxPC-3 ⁇ CLDN18.2 xenograft tumors were treated with IMAB362-vcMMAE.
  • mice On day 37 post-graft mice were sacrificed and selected organs dissected and formalin fixed. Sections of these FFPE tissues were stained with hematoxylin-eosin and examined microscopically for morphological alterations.
  • A, C Stomach tissue of a representative mouse from the treatment group with the highest IMAB362-vcMMAE exposure (16 mg/kg IMAB362-VCMMAE on day 14 and day 21 post-graft).
  • B, D Stomach tissue of a mouse of the control group treated with the vehicle only. Magnification: see scale bar.
  • Figure 23 Induction of apoptosis by IMAB362-DM4 and EMAB362-vcMMAE.
  • IMAB362-DM4- and IMAB362-vcMMAE-mediated induction of apoptosis was determined by measuring caspase 3/7 activity and staining with annexin V using target positive NUGC-4 10cE8 cells.
  • A) Caspase 3/7 activity was analyzed after the cells were incubated for 3 days in the presence of 2.5 ⁇ IMAB362 antibodies (n 3 replicates, mean ⁇ SD).
  • B) Flow cytometric analysis of cells co-stained with annexin V and propidium iodide (PI) was performed 4 days after treatment with 2.5 ⁇ IMAB362 antibodies (n 3 replicates). Untreated cells served as control.
  • Figure 24 Anti-tumoral efficacy of IMAB362-DM4 and IMAB362-vcMMAE in an advanced human NUGC-4 10cF7-S sort3a gastric xenograft tumor model.
  • NUGC-4 10cF7-5 sort3a cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice.
  • mice received vehicle, 15.2 mg/kg MAB362-DM4 or 16 mg/kg IMAB362-vcMMAE by a single IV injection.
  • Tumor volumes were measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm3, when tumors ulcerated or after the pre-defined observation period of 120 days.
  • Statistical analysis of tumor growth was performed using Kruskal-Wallis and post- hoc Dunn Test.
  • the terms used herein are defined as described in "A multilingual glossary of biotechnological terms: (IUPAC Recommendations) " , H.G.W. Leuenberger, B. Nagel, and H. Kolbl, Eds., Helvetica Chimica Acta, CH-4010 Basel, Switzerland, (1995).
  • Claudins are a family of proteins that are the most important components of tight junctions, where they establish the paracellular barrier that controls the flow of molecules in the intercellular space between cells of an epithelium. Claudins are transmembrane proteins spanning the membrane 4 times with the N-terminal and the C-terminal end both located in the cytoplasm. The first extracellular loop or domain consists on average of 53 amino acids, and the second extracellular loop or domain consists of around 24 amino acids. Cell surface proteins of the claudin family, such as CLDN18.2, are expressed in tumors of various origins, and are particularly suited as target structures in connection with antibody-mediated cancer immunotherapy due to their selective expression (no expression in a toxicity relevant normal tissue) and localization to the plasma membrane.
  • CLDN means claudin and includes CLDN18.2.
  • a claudin is a human claudin.
  • CLDN18 relates to claudin 18 and includes any variants, including claudin 18 splice variant 1 (claudin 18.1 (CLDN18.1)) and claudin 18 splice variant 2 (claudin 18.2 (CLDN18.2)).
  • CLDN18.2 preferably relates to human CLDN18.2, and, in particular, to a protein comprising, preferably consisting of the amino acid sequence according to SEQ ID NO: 1 of the sequence listing or a variant of said amino acid sequence.
  • the first extracellular loop or domain of CLDN18.2 preferably comprises amino acids 27 to 81, more preferably amino acids 29 to 78 of the amino acid sequence shown in SEQ ID NO: 1.
  • the second extracellular loop or domain of CLDN18.2 preferably comprises amino acids 140 to 180 of the amino acid sequence shown in SEQ ID NO: 1. Said first and second extracellular loops or domains preferably form the extracellular portion or domain of CLDN18.2.
  • CLDN18.2 is selectively expressed in normal tissues in differentiated epithelial cells of the gastric mucosa. CLDN18.2 is expressed in cancers of various origins such as pancreatic carcinoma, esophageal carcinoma, gastric carcinoma, bronchial carcinoma, breast carcinoma, and ENT tumors.
  • CLDN18.2 is a valuable target for the prevention and/or treatment of primary tumors, such as gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancers of the gallbladder, and metastases thereof, in particular gastric cancer metastasis such as Krukenberg tumors, peritoneal metastasis, and lymph node metastasis.
  • primary tumors such as gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancers of the gallbladder, and metastases thereof, in particular gastric cancer metastasis such as Krukenberg tumors, peritoneal metastasis, and lymph node metastasis.
  • CLDN18.1 preferably relates to human CLDN18.1, and, in particular, to a protein comprising, preferably consisting of the amino acid sequence according to SEQ ID NO: 2 of the sequence listing or a variant of said amino acid sequence.
  • allelic variant refers, in particular, to mutants, splice variants, conformations, isoforms, allelic variants, species variants and species homologs, in particular those which are naturally present
  • An allelic variant relates to an alteration in the normal sequence of a gene, the significance of which is often unclear.
  • Complete gene sequencing often identifies numerous allelic variants for a given gene.
  • a species homolog is a nucleic acid or amino acid sequence with a different species of origin from that of a given nucleic acid or amino acid sequence.
  • variant shall encompass any posttranslationally modified variants and conformation variants.
  • CLDN18.2-expressing cancer or "CLDN18.2-positive cancer” means a cancer involving cancer cells expressing CLDN18.2, preferably on the surface of said cancer cells.
  • Cell surface is used in accordance with its normal meaning in the art, and thus includes the outside of the cell which is accessible to binding by proteins and other molecules.
  • CLDN18.2 is expressed on the surface of cells if it is located at the surface of said cells and is accessible to binding by CLDN18.2-specific antibodies added to the cells.
  • extracellular portion or “extracellular domain” in the context of the present invention refers to a part of a molecule such as a protein that is facing the extracellular space of a cell and preferably is accessible from the outside of said cell, e.g., by antigen-binding molecules such as antibodies located outside the cell.
  • the term refers to one or more extracellular loops or domains or a fragment thereof.
  • CLDN18.2 is not substantially expressed in a cell if the level of expression is lower compared to expression in stomach cells or stomach tissue.
  • the level of expression is less than 10%, preferably less than 5%, 3%, 2%, 1%, 0.5%, 0.1% or 0.05% of the expression in stomach cells or stomach tissue or even lower.
  • CLDN18.2 is not substantially expressed in a cell if the level of expression exceeds the level of expression in non-cancerous tissue other than stomach by no more than 2-fold, preferably 1,5-fold, and preferably does not exceed the level of expression in said non-cancerous tissue.
  • CLDN18.2 is not substantially expressed in a cell if the level of expression is below the detection limit and/or if the level of expression is too low to allow binding by CLDN18.2-specific antibodies added to the cells.
  • CLDN18.2 is expressed in a cell if the level of expression exceeds the level of expression in non-cancerous tissue other than stomach preferably by more than 2- fold, preferably 10-fold, 100-fold, 1000-fold, or 10000-fold.
  • CLDN18.2 is expressed in a cell if the level of expression is above the detection limit and/or if the level of expression is high enough to allow binding by CLDN18.2-specific antibodies added to the cells.
  • CLDN18.2 expressed in a cell is expressed or exposed on the surface of said cell.
  • disease refers to an abnormal condition mat affects the body of an individual.
  • a disease is often construed as a medical condition associated with specific symptoms and signs.
  • a disease may be caused by factors originally from an external source, such as infectious disease, or it may be caused by internal dysfunctions, such as autoimmune diseases.
  • disease is often used more broadly to refer to any condition that causes pain, dysfunction, distress, social problems, or death to the individual afflicted, or similar problems for those in contact with the individual. In this broader sense, it sometimes includes injuries, disabilities, disorders, syndromes, infections, isolated symptoms, deviant behaviors, and atypical variations of structure and function, while in other contexts and for other purposes these may be considered distinguishable categories.
  • Diseases usually affect individuals not only physically, but also emotionally, as contracting and living with many diseases can alter one's perspective on life, and one's personality.
  • the term "disease” includes cancer, in particular those forms of cancer described herein. Any reference herein to cancer or particular forms of cancer also includes cancer metastasis thereof.
  • a disease to be treated according to the present application involves cells expressing CLDN18.2.
  • “Disease involving cells expressing CLDN18.2” or “disease associated with cells expressing CLDN18.2” or similar expressions means according to the invention that CLDN18.2 is expressed in cells of a diseased tissue or organ.
  • expression of CLDN18.2 in cells of a diseased tissue or organ is increased compared to the state in a corresponding healthy tissue or organ.
  • An increase refers to an increase by at least 10%, in particular at least 20%, at least 50%, at least 100%, at least 200%, at least 500%, at least 1000%, at least 10000% or even more.
  • expression is only found in a diseased tissue, while expression in a corresponding healthy tissue is repressed.
  • diseases associated with cells expressing CLDN18.2 include cancer diseases.
  • cancer diseases preferably are those wherein the cancer cells express CLDN18.2.
  • cancer disease refers to or describe the physiological condition in an individual that is typically characterized by unregulated cell growth.
  • cancers include, but are not limited to, carcinoma, lymphoma, blastema, sarcoma, and leukemia.
  • examples of such cancers include bone cancer, blood cancer, lung cancer, liver cancer, pancreatic cancer, skin cancer, cancer of the head or neck, cutaneous or intraocular melanoma, uterine cancer, ovarian cancer, rectal cancer, cancer of the anal region, stomach cancer, colon cancer, breast cancer, prostate cancer, uterine cancer, carcinoma of the sexual and reproductive organs, Hodgkin's Disease, cancer of the esophagus, cancer of the small intestine, cancer of the endocrine system, cancer of the thyroid gland, cancer of the parathyroid gland, cancer of the adrenal gland, sarcoma of soft tissue, cancer of the bladder, cancer of the kidney, renal cell carcinoma, carcinoma of the renal pelvis, neoplasms of the central nervous system (CNS), neuroectodermal cancer, spinal axis tumors, glioma, meningioma, and pituitary adenoma.
  • CNS central nervous system
  • cancer also comprises cancer metastases.
  • a “cancer disease” is characterized by cells expressing CLDN18.2 and a cancer cell expresses CLDN18.2.
  • a cell expressing CLDN18.2 preferably is a cancer cell, preferably of the cancers described herein.
  • tumor refers to an abnormal growth of cells (called neoplastic cells, tumorigenous cells or tumor cells) preferably forming a swelling or lesion.
  • tumor cell is meant an abnormal cell that grows by a rapid, uncontrolled cellular proliferation and continues to grow after the stimuli that initiated the new growth cease. Tumors show partial or complete lack of structural organization and functional coordination with the normal tissue, and usually form a distinct mass of tissue, which may be either benign, pre-malignant or malignant.
  • a “cancer disease” preferably is a “tumor disease”.
  • cancer and “tumor” are used interchangeably herein.
  • a cancer according to the invention involves cancer cells expressing CLDN18.2.
  • the cancer is CLDN18.2 positive.
  • expression of CLDN18.2 is at the surface of the cells.
  • at least 50%, preferably 60%, 70%, 80% or 90% of the cancer cells are CLDN18.2 positive and/or at least 40%, preferably at least 50% of the cancer cells are positive for surface expression of CLDN18.2.
  • at least 95% or at least 98% of the cancer cells are CLDN18.2 positive.
  • at least 60%, at least 70%, at least 80% or at least 90% of the cancer cells are positive for surface expression of CLDN18.2.
  • a CLDN 18.2-expressing cancer a cancer involving cancer cells expressing CLDN18.2 or a CLDN18.2 positive cancer is selected from the group consisting of gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancer of the gallbladder and metastases thereof, in particular gastric cancer metastasis such as Knikenberg tumors, peritoneal metastasis and lymph node metastasis.
  • the cancer is an adenocarcinoma, in particular an advanced adenocarcinoma.
  • cancer diseases are adenocarcinomas of the stomach, the esophagus, the pancreatic duct, the bile ducts, the lung and the ovary.
  • the cancer is selected from the group consisting of cancer of the stomach, cancer of the esophagus, in particular the lower esophagus, cancer of the eso- gastric junction and gastroesophageal cancer.
  • the cancer is gastroesophageal cancer such as metastatic, refractory or recurrent advanced gastroesophageal cancer.
  • a "carcinoma” is a malignant tumor derived from epithelial cells. This group represents the most common cancers, including the common forms of breast, prostate, lung and colon cancer.
  • Adenocarcinoma is a cancer that originates in glandular tissue. This tissue is also part of a larger tissue category known as epithelial tissue. Epithelial tissue includes skin, glands and a variety of other tissue that lines the cavities and organs of the body. Epithelium is derived embryologically from ectoderm, endoderm and mesoderm. To be classified as adenocarcinoma, the cells do not necessarily need to be part of a gland, as long as they have secretory properties. This form of carcinoma can occur in some higher mammals, including humans.
  • adenocarcinomas tend to resemble the glandular tissue that they are derived from, while poorly differentiated may not By staining the cells from a biopsy, a pathologist will determine whether the tumor is an adenocarcinoma or some other type of cancer.
  • Adenocarcinomas can arise in many tissues of the body due to the ubiquitous nature of glands within the body. While each gland may not be secreting the same substance, as long as there is an exocrine function to the cell, it is considered glandular and its malignant form is therefore named adenocarcinoma. Malignant adenocarcinomas invade other tissues and often metastasize given enough time to do so.
  • Ovarian adenocarcinoma is the most common type of ovarian carcinoma. It includes the serous and mucinous adenocarcinomas, the clear cell adenocarcinoma and the endometrioid adenocarcinoma.
  • metastasis is meant the spread of cancer cells from its original site to another part of the body.
  • the formation of metastasis is a very complex process and depends on detachment of malignant cells from the primary tumor, invasion of the extracellular matrix, penetration of the endothelial basement membranes to enter the body cavity and vessels, and then, after being transported by the blood, infiltration of target organs. Finally, the growth of a new tumor at the target site depends on angiogenesis. Tumor metastasis often occurs even after the removal of the primary tumor because tumor cells or components may remain and develop metastatic potential.
  • the term "metastasis” according to the invention relates to "distant metastasis” which relates to a metastasis which is remote from the primary tumor and the regional lymph node system.
  • the term "metastasis” according to the invention relates to lymph node metastasis.
  • One particular form of metastasis which is treatable using the therapy of the invention is metastasis originating from gastric cancer as primary site.
  • gastric cancer metastasis is Krukenberg tumors, peritoneal metastasis and/or lymph node metastasis.
  • Krukenberg tumor is an uncommon metastatic tumor of the ovary accounting for 1% to 2% of all ovarian tumors. Prognosis of Krukenberg tumor is still very poor and there is no established treatment for Krukenberg tumors.
  • Krukenberg tumor is a metastatic signet ring cell adenocarcinoma of the ovary. Stomach is the primary site in most Krukenberg tumor cases (70%). Carcinomas of colon, appendix, and breast (mainly invasive lobular carcinoma) are the next most common primary sites. Rare cases of Krukenberg tumor originating from carcinomas of the gallbladder, biliary tract, pancreas, small intestine, ampulla of Vater, cervix, and urinary bladder/urachus have been reported.
  • the interval between the diagnosis of a primary carcinoma and the subsequent discovery of ovarian involvement is usually 6 months or less, but longer periods have been reported.
  • the primary tumor is very small and can escape detection.
  • a history of a prior carcinoma of the stomach or another organ can be obtained in only 20% to 30% of the cases.
  • (therapeutic) treatment in particular in connection with the treatment of cancer as used herein, relates to any treatment which aims at improving the health status and/or prolonging (increasing) the lifespan of a patient.
  • Said treatment may eliminate cancer, reduce the size or the number of tumors in a patient, arrest or slow the development of cancer in a patient, inhibit or slow the development of new cancer in a patient, decrease the frequency or severity of symptoms in a patient, and/or decrease recurrences in a patient who currently has or who previously has had cancer.
  • a (therapeutic) treatment of cancer may be selected from the group consisting of surgery, chemotherapy, radiation therapy and targeted therapy.
  • the term "surgery”, as used herein, includes the removal of tumors in an operation. It is a common treatment for cancer. A surgeon may remove the tumors using local excision.
  • chemotherapeutic agents refers to the use of chemotherapeutic agents or combinations of chemotherapeutic agents, preferably to stop the growth of cancer cells, either by killing the cells or by stopping them from dividing.
  • chemotherapy is taken by mouth or injected into a vein or muscle, the drugs enter the bloodstream and can reach cancer cells throughout the body (systemic chemotherapy).
  • systemic chemotherapy When chemotherapy is placed directly into the cerebrospinal fluid, an organ, or a body cavity such as the abdomen, the drugs mainly affect cancer cells in those areas (regional chemotherapy).
  • Chemotherapeutic agents according to the invention include cytostatic compounds and cytotoxic compounds.
  • Traditional chemotherapeutic agents act by killing cells that divide rapidly, one of the main properties of most cancer cells. This means that chemotherapy also harms cells that divide rapidly under normal circumstances such as cells in the bone marrow, digestive tract, and hair follicles. This results in the most common side-effects of chemotherapy.
  • the term "chemotherapy” preferably does not include antibodies that target proteins that are abnormally expressed in cancer cells (tumor antigens such as CLDN18.2) and act through recruiting the patient's immune system to destroy tumor cells.
  • Antibodies that target proteins that are abnormally expressed in cancer cells can be viewed as a form of chemotherapy.
  • chemotherapy does not include targeted therapy.
  • targeted therapy relates to any therapy that can be used to target preferentially diseased cells such as cancer cells while non-diseased cells are not targeted or targeted to a lesser extent Targeting of diseased cells preferably results in killing and/or impairment of proliferation or viability of diseased cells.
  • Such therapy includes i) antibodies, antibody fragments, and proteins that are either naked or conjugated to a therapeutic moiety that target certain cell surface targets on diseased cells, such as tumor antigens, for example, CLDN18.2, (e.g. antibodies or antibody conjugates against CLDN18.2 as described herein) or ii) small molecules which impair proliferation or viability of diseased cells.
  • the agent binds to an antigen that is expressed at a greater level on diseased than on normal stem cells.
  • the agent binds specifically to a tumor antigen.
  • Traditional chemotherapy or radiotherapy is not considered a "targeted therapy" despite its often being aimed at the tumours.
  • antibody therapy preferably does not include therapy with antibodies, fragments or derivatives thereof that are conjugated to a therapeutic moiety but merely relates to therapy with antibodies, fragments or derivatives thereof acting through recruiting the patient's immune system to destroy tumor cells.
  • terms such as “protect”, “prevent” or “prophylactic” relate to the prevention of the occurrence and/or the propagation of a disease in a subject and, in particular, to minimizing the chance that a subject will develop a disease or to delaying the development of a disease.
  • a subject at risk for cancer would be a candidate for therapy to prevent cancer.
  • being at risk is meant a subject that is identified as having a higher than normal chance of developing a disease, in particular cancer, compared to the general population.
  • a subject who has had, or who currently has, a disease, in particular cancer is a subject who has an increased risk for developing a disease, as such a subject may continue to develop a disease.
  • Subjects who currently have, or who have had, a cancer also have an increased risk for cancer metastases.
  • the terms “individual” and “subject” are used herein interchangeably. They refer to human beings, non-human primates or other mammals (e.g. mouse, rat, rabbit, dog, cat, cattle, swine, sheep, horse or primate) that can be afflicted with or are susceptible to a disease or disorder (e.g., cancer) but may or may not have the disease or disorder.
  • the individual is a human being.
  • the terms “individual” and “subject” do not denote a particular age, and thus encompass adults, elderlies, children, and newborns.
  • the "individual” or “subject” is a "patient".
  • patient means according to the invention a subject for treatment, in particular a diseased subject.
  • an antigen relates to an agent such as a protein or peptide comprising an epitope against which an immune response is directed and/or is to be directed.
  • an antigen is a tumor-associated antigen, such as CLDN18.2, i.e., a constituent of cancer cells which may be derived from the cytoplasm, the cell surface and the cell nucleus, in particular those antigens which are produced, preferably in large quantity, intracellular or as surface antigens on cancer cells.
  • tumor-associated antigen or “tumor antigen” preferably relates to proteins that are under normal conditions specifically expressed in a limited number of tissues and/or organs or in specific developmental stages and are expressed or aberrantly expressed in one or more tumor or cancer tissues.
  • the tumor-associated antigen is preferably associated with the cell surface of a cancer cell and is preferably not or only rarely expressed in normal tissues.
  • epitope refers to an antigenic determinant in a molecule, i.e., to the part in a molecule that is recognized by the immune system, for example, that is recognized by an antibody.
  • epitopes are the discrete, three-dimensional sites on an antigen, which are recognized by the immune system.
  • Epitopes usually consist of chemically active surface groupings of molecules such as amino acids or sugar side chains and usually have specific three dimensional structural characteristics, as well as specific charge characteristics. Conformational and non-conformational epitopes are distinguished in that the binding to the former but not the latter is lost in the presence of denaturing solvents.
  • An epitope of a protein such as CLDN18.2 preferably comprises a continuous or discontinuous portion of said protein and is preferably between S and 100, preferably between 5 and 50, more preferably between 8 and 30, most preferably between 10 and 25 amino acids in length, for example, the epitope may be preferably 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, or 25 amino acids in length.
  • the term "antibody” includes a glycoprotein comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds, and any molecule comprising an antigen-binding portion of such glycoprotein.
  • antibody includes monoclonal antibodies, recombinant antibodies, human antibodies, humanized antibodies, chimeric antibodies, molecules comprising binding fragments or derivatives of antibodies, including, without limitation, single chain antibodies, e.g., scFv's and antigen-binding antibody fragments such as Fab and Fab' fragments and also includes all recombinant forms of antibodies, e.g., antibodies expressed in prokaryotes, unglycosylated antibodies, and any antigen-binding antibody fragments and derivatives as described herein.
  • Each heavy chain is comprised of a heavy chain variable region (abbreviated herein as VH) and a heavy chain constant region.
  • Each light chain is comprised of a light chain variable region (abbreviated herein as VL) and a light chain constant region.
  • VH and VL regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR).
  • CDR complementarity determining regions
  • FR framework regions
  • Each VH and VL is composed of three CDRs and four FRs, arranged from ammo-terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4.
  • the variable regions of the heavy and light chains contain a binding domain that interacts with an antigen.
  • the constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g., effector cells) and the first component (Clq) of the classical complement system.
  • the term "monoclonal antibody” as used herein refers to a preparation of antibody molecules of single molecular composition.
  • a monoclonal antibody displays a single binding specificity and affinity.
  • the monoclonal antibodies are produced by a hybridoma which includes a B cell obtained from a non-human animal, e.g., mouse, fused to an immortalized cell.
  • recombinant antibody includes all antibodies that are prepared, expressed, created or isolated by recombinant means, such as (a) antibodies isolated from an animal (e.g., a mouse) that is transgenic or transchromosomal with respect to the immunoglobulin genes or a hybridoma prepared therefrom, (b) antibodies isolated from a host cell transformed to express the antibody, e.g., from a transfectoma, (c) antibodies isolated from a recombinant, combinatorial antibody library, and (d) antibodies prepared, expressed, created or isolated by any other means that involve splicing of immunoglobulin gene sequences to other DNA sequences.
  • human antibody is intended to include antibodies having variable and constant regions derived from human germline immunoglobulin sequences. Human antibodies may include amino acid residues not encoded by human germline immunoglobulin sequences (e.g., mutations introduced by random or site-specific mutagenesis in vitro or by somatic mutation in vivo).
  • humanized antibody refers to a molecule having an antigen binding site that is substantially derived from an immunoglobulin from a non-human species, wherein the remaining immunoglobulin structure of the molecule is based upon the structure and/or sequence of a human immunoglobulin.
  • the antigen binding site may either comprise complete variable domains fused onto constant domains or only the complementarity determining regions (CDR) grafted onto appropriate framework regions in the variable domains.
  • Antigen binding sites may be wild-type or modified by one or more amino acid substitutions, e.g. modified to resemble human immunoglobulins more closely.
  • Some forms of humanized antibodies preserve all CDR sequences (for example a humanized mouse antibody which contains all six CDRs from the mouse antibody). Other forms have one or more CDRs which are altered with respect to the original antibody.
  • chimeric antibody refers to those antibodies wherein one portion of each of the amino acid sequences of heavy and light chains is homologous to corresponding sequences in antibodies derived from a particular species or belonging to a particular class, while the remaining segment of the chain is homologous to corresponding sequences in another.
  • variable region of both light and heavy chains mimics the variable regions of antibodies derived from one species of mammals, while the constant portions are homologous to sequences of antibodies derived from another.
  • One clear advantage to such chimeric forms is that the variable region can conveniently be derived from presently known sources using readily available B-cells or hybridomas from non-human host organisms in combination with constant regions derived from, for example, human cell preparations.
  • variable region has the advantage of ease of preparation and the specificity is not affected by the source, the constant region being human, is less likely to elicit an immune response from a human subject when the antibodies are injected than would the constant region from a non human source.
  • definition is not limited to this particular example.
  • antigen-binding portion of an antibody (or simply “binding portion") or "antigen- binding fragment” of an antibody (or simply “binding fragment”) or similar terms refer to one or more fragments of an antibody that retain the ability to specifically bind to an antigen. It has been shown that the antigen-binding function of an antibody can be performed by fragments of a full-length antibody.
  • binding fragments encompassed within the term "antigen-binding portion" of an antibody include (i) Fab fragments, monovalent fragments consisting of the VL, VH, CL and CH domains; (ii) F(ab')2 fragments, bivalent fragments comprising two Fab fragments linked by a disulfide bridge at the hinge region; (iii) Fd fragments consisting of the VH and CH domains; (iv) Fv fragments consisting of the VL and VH domains of a single arm of an antibody, (v) dAb fragments (Ward et al., (1989) Nature 341: 544-546), which consist of a VH domain; (vi) isolated complementarity detennining regions (CDR), and (vii) combinations of two or more isolated CDRs which may optionally be joined by a synthetic linker.
  • Fab fragments monovalent fragments consisting of the VL, VH, CL and CH domains
  • F(ab')2 fragments bivalent
  • the two domains of the Fv fragment, VL and VH are coded for by separate genes, they can be joined, using recombinant methods, by a synthetic linker that enables them to be made as a single protein chain in which the VL and VH regions pair to form monovalent molecules (known as single chain Fv (scFv); see e.g., Bird et al. (1988) Science 242: 423-426; and Huston et al. (1988) Proc. Natl. Acad. Sci. USA 85: 5879-5883).
  • single chain Fv single chain Fv
  • Such single chain antibodies are also intended to be encompassed within the term "antigen-binding fragment" of an antibody.
  • a further example is binding- domain immunoglobulin fusion proteins comprising (i) a binding domain polypeptide that is fused to an immunoglobulin hinge region polypeptide, (ii) an immunoglobulin heavy chain CH2 constant region fused to the hinge region, and (iii) an immunoglobulin heavy chain CH3 constant region fused to the CH2 constant region.
  • the binding domain polypeptide can be a heavy chain variable region or a light chain variable region.
  • the binding-domain immunoglobulin fusion proteins are further disclosed in US 2003/0118592 and US 2003/0133939. These antibody fragments are obtained using conventional techniques known to those with skill in the art, and the fragments are screened for utility in the same manner as are intact antibodies.
  • Naturally occurring antibodies are generally monospecific, i.e. they bind to a single antigen.
  • the present invention comprises antibodies binding to a target cell (by engaging a tumor antigen) and a second entity such as a cytotoxic cell (e.g. by engaging the CD3 receptor).
  • the antibodies of the present invention may be bispecific or multispecific such as trispecific, tetraspecific and so on.
  • bispecific molecule is intended to include an agent which has two different binding specificities.
  • the molecule may bind to, or interact with (a) a cell surface antigen such as CLDN18.2, and (b) a receptor such as an Fc receptor on the surface of an effector cell.
  • a cell surface antigen such as CLDN18.2
  • a receptor such as an Fc receptor on the surface of an effector cell.
  • multispecific molecule is intended to include an agent which has more than two different binding specificities.
  • the molecule may bind to, or interact with (a) a cell surface antigen such as CLDN18.2, (b) a receptor such as an Fc receptor on the surface of an effector cell, and (c) at least one other component
  • a cell surface antigen such as CLDN18.2
  • a receptor such as an Fc receptor on the surface of an effector cell
  • at least one other component includes, but is not limited to, bispecific, trispecific, tetraspecific, and other multispecific molecules which are directed to a tumor antigen, and to other targets, such as Fc receptors on effector cells.
  • bispecific antibodies also includes diabodies.
  • Diabodies are bivalent, bispecific antibodies in which the VH and VL domains are expressed on a single polypeptide chain, but using a linker that is too short to allow for pairing between the two domains on the same chain, thereby forcing the domains to pair with complementary domains of another chain and creating two antigen binding sites (see e.g. , Holliger, P., et al. (1993) Proc. Natl. Acad. Sci. USA 90: 6444-6448; Poljak, R. J., et al. (1994) Structure 2: 1121-1123).
  • Antibodies may be derived from different species, including but not limited to mouse, rat, rabbit, guinea pig and human.
  • isotype refers to the antibody class (e.g., IgM or IgGl) that is encoded by heavy chain constant region genes.
  • isotype switching refers to the phenomenon by which the class, or isotype, of an antibody changes from one Ig class to one of the other Ig classes.
  • Antibodies described herein include IgA such as IgAl or IgA2, IgGl, IgG2, IgG3, IgG4, IgE, IgM, and IgD antibodies.
  • the antibody is an IgGl antibody, more particularly an IgGl, kappa or IgGl, lambda isotype (i.e. IgGl, ⁇ , ⁇ ), an IgG2a antibody (e.g. IgG2a, K, ⁇ ), an IgG2b antibody (e.g. IgG2b, ⁇ , ⁇ ), an IgG3 antibody (e.g. IgG3, ⁇ , ⁇ ) or an IgG4 antibody (e.g. IgG4, ⁇ , ⁇ ).
  • a heterologous antibody is defined in relation to a transgenic organism producing such an antibody. This term refers to an antibody having an amino acid sequence or an encoding nucleic acid sequence corresponding to that found in an organism not consisting of the transgenic organism, and being generally derived from a species other than the transgenic organism.
  • heterohybrid antibody refers to an antibody having light and heavy chains of different organismal origins.
  • an antibody having a human heavy chain associated with a murine light chain is a heterohybrid antibody.
  • the antibodies described herein are preferably isolated.
  • An "isolated antibody” as used herein, is intended to refer to an antibody which is substantially free of other antibodies having different antigenic specificities (e.g., an isolated antibody that specifically binds to a tumor antigen is substantially free of antibodies that specifically bind antigens other than the tumor antigen).
  • An isolated antibody that specifically binds to an epitope, isoform or variant of a human tumor antigen may, however, have cross-reactivity to other related antigens, e.g., from other species (e.g., tumor antigen species homologs).
  • an isolated antibody may be substantially free of other cellular material and/or chemicals.
  • a combination of "isolated" monoclonal antibodies relates to antibodies having different specificities and being combined in a well defined composition or mixture.
  • an antibody is capable of acting through recruiting the patient's immune system to destroy tumor cells if the antibody, in particular when bound to its target such as a tumor antigen on a diseased cell, elicits immune effector functions as described herein.
  • said immune effector functions are directed against cells such as cancer cells carrying a tumor antigen such as CLDN18.2 on their surface.
  • immune effector functions in the context of the present invention includes any functions mediated by components of the immune system that result e.g. in the inhibition of tumor growth and/or inhibition of tumor development, including inhibition of tumor dissemination and metastasis.
  • immune effector functions result in killing of cancer cells.
  • Such functions comprise complement dependent cytotoxicity (CDC), antibody- dependent cell-mediated cytotoxicity (ADCC), antibody-dependent cell-mediated phagocytosis (ADCP), induction of apoptosis in the cells carrying the tumor antigen, cytolysis of the cells carrying the tumor antigen, and/or inhibition of proliferation of the cells carrying the tumor antigen.
  • ADCC describes the cell-killing ability of effector cells, in particular lymphocytes, which preferably requires the target cell being marked by an antibody.
  • ADCC preferably occurs when antibodies bind to antigens on tumor cells and the antibody Fc domains engage Fc receptors (FcR) on the surface of immune effector cells.
  • FcR Fc receptors
  • Several families of Fc receptors have been identified, and specific cell populations characteristically express defined Fc receptors.
  • ADCC can be viewed as a mechanism to directly induce a variable degree of immediate tumor destruction that leads to antigen presentation and the induction of tumor-directed T-cell responses.
  • in vivo induction of ADCC will lead to tumor- directed T-cell responses and host-derived antibody responses.
  • CDC is another cell-killing method that can be directed by antibodies.
  • IgM is the most effective isotype for complement activation.
  • IgGl and IgG3 are also both very effective at directing CDC via the classical complement-activation pathway.
  • the formation of antigen-antibody complexes results in the uncloaking of multiple Clq binding sites in close proximity on the CH2 domains of participating antibody molecules such as IgG molecules (Clq is one of three subcomponents of complement CI).
  • these uncloaked Clq binding sites convert the previously low-affinity Clq-IgG interaction to one of high avidity, which triggers a cascade of events involving a series of other complement proteins and leads to the proteolytic release of the effector-cell chemotactic/activating agents C3a and CSa.
  • the complement cascade ends in the formation of a membrane attack complex, which creates pores in the cell membrane that facilitate free passage of water and solutes into and out of the cell.
  • an antibody is "derived from" a particular germline sequence if the antibody is obtained from a system by immunizing an animal or by screening an immunoglobulin gene library, and wherein the selected antibody is at least 90%, more preferably at least 95%, even more preferably at least 96%, 97%, 98%, or 99% identical in amino acid sequence to the amino acid sequence encoded by the germline immunoglobulin gene.
  • an antibody derived from a particular germline sequence will display no more than 10 amino acid differences, more preferably, no more than 5, or even more preferably, no more than 4, 3, 2, or 1 amino acid difference from the amino acid sequence encoded by the germline immunoglobulin gene.
  • heteroantibodies refers to two or more antibodies, derivatives thereof, or antigen binding regions linked together, at least two of which have different specificities. These different specificities include a binding specificity for an Fc receptor on an effector cell, and a binding specificity for an antigen or epitope on a target cell, e.g., a tumor cell.
  • transfectoma includes recombinant eukaryotic host cells expressing an antibody, such as CHO cells, NS/0 cells, HEK293 cells, HEK293T cells, plant cells, or fungi, including yeast cells.
  • antibody derivatives refers to any modified form of an antibody, e.g., a conjugate of the antibody and another agent or antibody, or an antibody fragment
  • antibody against a tumor antigen or similar terms relates to an antibody directed to or having the ability of binding to the tumor antigen.
  • binding according to the invention preferably relates to a specific binding.
  • an antibody or antibody-drug conjugate is capable of binding to a predetermined target if it has a significant affinity for said predetermined target and binds to said predetermined target in standard assays.
  • "Affinity” or "binding affinity” is often measured by equilibrium dissociation constant (KD).
  • KD equilibrium dissociation constant
  • the term "significant affinity” refers to the binding to a predetermined target with a dissociation constant (KD) of 10 -5 M or lower, 10 -6 M or lower, 10 -7 M or lower, 10 -8 M or lower, 10 -9 M or lower, 10 '10 M or lower, 10 -11 M or lower, or 10 -12 M or lower.
  • An antibody or antibody-drug conjugate is not (substantially) capable of binding to a target if it has no significant affinity for said target and does not bind significantly, in particular does not bind detectably, to said target in standard assays.
  • the antibody or antibody- drug conjugate does not detectably bind to said target if present in a concentration of up to 2, preferably 10, more preferably 20, in particular 50 or 100 ⁇ or higher.
  • an antibody or antibody-drug conjugate has no significant affinity for a target if it binds to said target with a Ko that is at least 10-fold, 100-fold, ltf-fold, ltf-fold, lO ⁇ fold, or 10 6 -fold higher than the Ko for binding to the predetermined target to which the antibody or antibody- drug conjugate is capable of binding.
  • the KD for binding of an antibody or antibody-drug conjugate to the target to which the antibody or antibody-drug conjugate is capable of binding is 10 -7 M
  • the KD for binding to a target for which the antibody or antibody-drug conjugate has no significant affinity would be is at least 10 -6 M, 10 ⁇ s M, 10"* M, 10 '3 M, lO -2 M, or 10 1 M.
  • an antibody or antibody-drug conjugate is specific for a predetermined target if it is capable of binding to said predetermined target while it is not capable of binding to other targets, i.e. has no significant affinity for other targets and does not significantly bind to other targets in standard assays.
  • an antibody or antibody-drug conjugate is specific for a tumor antigen such as CLDN18.2 if it is capable of binding to the tumor antigen but is not (substantially) capable of binding to other targets.
  • an antibody or antibody-drug conjugate is specific for a tumor antigen if the affinity for and the binding to such other targets does not significantly exceed the affinity for or binding to tumor antigen- unrelated proteins such as bovine serum albumin (BSA), casein, human serum albumin (HSA) or non-tumor antigen transmembrane proteins such as MHC molecules or transferrin receptor or any other specified polypeptide.
  • BSA bovine serum albumin
  • HSA human serum albumin
  • non-tumor antigen transmembrane proteins such as MHC molecules or transferrin receptor or any other specified polypeptide.
  • an antibody or antibody-drug conjugate is specific for a pr ⁇ etermined target if it binds to said target with a KD that is at least 10-fold, 100-fold, lO ⁇ fold, ltf-fold, 10 -5 -fold, or 10 6 -fold lower than the KD for binding to a target for which it is not specific.
  • the KD for binding of an antibody or antibody-drug conjugate to the target for which it is specific is 10 '7 M
  • the KD for binding to a target for which it is not specific would be at least 10 -6 M, 10 -5 M, 10 -4 M, 10 -3 M, 10 -2 M, or 10 1 M.
  • Binding of an antibody to a target can be determined experimentally using any suitable method; see, for example, Berzofsky et al., "Antibody-Antigen Interactions" In Fundamental Immunology, Paul, W. E., Ed., Raven Press New York, N Y (1984), Kuby, Janis Immunology, W. H. Freeman and Company New York, N Y (1992), and methods described herein. Affinities may be readily determined using conventional techniques, such as by equilibrium dialysis; by using the BIAcore 2000 instrument, using general procedures outlined by the manufacturer; by radioimmunoassay using radiolabeled target antigen; or by another method known to the skilled artisan.
  • the affinity data may be analyzed, for example, by the method of Scatchard et al., Ann N.Y. Acad. ScL, 51:660 (1949).
  • the measured affinity of a particular antibody-antigen interaction can vary if measured under different conditions, e.g., salt concentration, pH.
  • affinity and other antigen-binding parameters e.g., KD, ICSO, are preferably made with standardized solutions of antibody and antigen, and a standardized buffer.
  • naturally occurring' 1 refers to the fact that an object can be found in nature.
  • a polypeptide or polynucleotide sequence that is present in an organism (including viruses) that can be isolated from a source in nature and which has not been intentionally modified by man in the laboratory is naturally occurring.
  • rearranged 11 refers to a configuration of a heavy chain or light chain immunoglobulin locus wherein a V segment is positioned immediately adjacent to a D-J or J segment in a conformation encoding essentially a complete VH or VL domain, respectively.
  • a rearranged immunoglobulin (antibody) gene locus can be identified by comparison to germline DNA; a rearranged locus will have at least one recombined heptamer/nonamer homology element
  • V segment configuration refers to the configuration wherein the V segment is not recombined so as to be immediately adjacent to a D or J segment.
  • an antibody having the ability of binding to CLDN18.2 is an antibody capable of binding to an epitope present in CLDN18.2, preferably an epitope located within the extracellular domains of CLDN18.2, in particular the first extracellular domain, preferably amino acid positions 29 to 78 of CLDN18.2.
  • an antibody having the ability of binding to CLDN18.2 is an antibody capable of binding to (i) an epitope on CLDN18.2 which is not present on CLDN18.1, preferably SEQ ID NO: 3, 4, and S, (ii) an epitope localized on the CLDN18.2-loopl, preferably SEQ ID NO: 8, (iii) an epitope localized on the CLDN18.2-loop2, preferably SEQ ID NO: 10, (iv) an epitope localized on the CLDN18.2-loopD3, preferably SEQ ID NO: 11, (v) an epitope, which encompass CLDN18.2-loopl and CLDN18.2-loopD3, or (vi) a non-glycosylated epitope localized on the CLDN18.2-loopD3, preferably SEQ ID NO: 9.
  • an antibody having the ability of binding to CLDN18.2 preferably is an antibody having the ability of binding to CLDN18.2 but not to CLDN18.1.
  • an antibody having the ability of binding to CLDN18.2 is specific for CLDN18.2.
  • an antibody having the ability of binding to CLDN18.2 preferably is an antibody having the ability of binding to CLDN18.2 expressed on the cell surface.
  • an antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells.
  • an antibody having the ability of binding to CLDN18.2 binds to one or more peptides selected from the group consisting of SEQ ID NOs: 1, 3-11, 44, 46, and 48-50.
  • an antibody having the ability of binding to CLDN18.2 is specific for the afore mentioned proteins, peptides or immunogenic fragments or derivatives thereof.
  • An antibody having the ability of binding to CLDN18.2 may be obtained by a method comprising the step of immunizing an animal with a protein or peptide comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 1, 3-11, 44, 46, and 48-50, or a nucleic acid or host cell expressing said protein or peptide.
  • the antibody binds to cancer cells, in particular cells of the cancer types mentioned above and, preferably, does not bind substantially to non-cancerous cells.
  • an antibody having the ability of binding to CLDN18.2 is produced by a hybridoma deposited at the DSMZ (Mascheroder Weg lb, 31824 Braunschweig, Germany, new address: Inhoffenstr. 7B, 31824 Braunschweig, Germany) and having the following designation and accession number:
  • accession no. DSM ACC2742 deposited on October 19, 2005
  • accession no. DSM ACC2743 deposited on October 19, 2005
  • accession no. DSM ACC2745 deposited on Nov. 17, 2005
  • accession no. DSM ACC2746 deposited on Nov. 17, 2005
  • Preferred antibodies according to the invention are those produced by and obtainable from the above-described hybridomas; i.e. 37G11 in the case of 182-D1106-055, 37H8 in the case of 182-D 1106-056, 38G5 in the case of 182-D 1106-057, 38H3 in the case of 182-D 1106-058, 39F11 in the case of 182-D1106-059, 43A11 in the case of 182-D 1106-062, 61C2 in the case of 182-D1106-067, 26B5 in the case of 182-D758-035, 26D12 in the case of 182-D758-036, 28D10 in the case of 182-D758-040, 42E12 in the case of 182-D 1106-061, 125E1 in the case of 182-D1106-279, 163E12 in the case of 182-D1106-294, and 175D10 in the case of 182- Dl 106-362; and the chimerized and humanized forms thereof.
  • an antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i), and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i).
  • antibodies, in particular chimerised forms of antibodies according to the invention include antibodies comprising a heavy chain constant region (CH) comprising an amino acid sequence derived from a human heavy chain constant region such as the amino acid sequence represented by SEQ ID NO: 13 or a fragment thereof.
  • antibodies, in particular chimerised forms of antibodies according to the invention include antibodies comprising a light chain constant region (CL) comprising an amino acid sequence derived from a human light chain constant region such as the amino acid sequence represented by SEQ ID NO: 12 or a fragment thereof.
  • antibodies in particular chimerised forms of antibodies according to the invention include antibodies which comprise a CH comprising an amino acid sequence derived from a human CH such as the amino acid sequence represented by SEQ ID NO: 13 or a fragment thereof and which comprise a CL comprising an amino acid sequence derived from a human CL such as the amino acid sequence represented by SEQ ID NO: 12 or a fragment thereof.
  • an antibody having the ability of binding to CLDN18.2 is a chimeric mouse/human IgGl monoclonal antibody comprising kappa, murine variable light chain, human kappa light chain constant region allotype Km(3), murine heavy chain variable region, human IgGl constant region, allotype Glm(3).
  • chimerised forms of antibodies include antibodies comprising a heavy chain comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 14, IS, 16, 17, 18, 19, 51, and a fragment thereof and/or comprising a light chain comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 20, 21, 22, 23, 24, 25, 26, 27, 28, and a fragment thereof.
  • chimerised forms of antibodies include antibodies comprising a combination of heavy chains and light chains selected from the following possibilities (i) to (ix):
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 14 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 21 or a fragment thereof,
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof,
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 16 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 22 or a fragment thereof,
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 18 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 25 or a fragment thereof,
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 17 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 23 or a fragment thereof
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 26 or a fragment thereof,
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 27 or a fragment thereof;
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 28 or a fragment thereof, and
  • the heavy chain comprises an amino acid sequence represented by SEQ ID NO: SI or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof.
  • the antibodies according to (ii), (v) or (x) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2".
  • the antibody according to (v) or (x) is particularly preferred.
  • “Fragment” or “fragment of an amino acid sequence” as used above relates to a part of an antibody sequence, i.e. a sequence which represents the antibody sequence shortened at the N- and/or C-terminus, which when it replaces said antibody sequence in an antibody retains binding of said antibody to CLDN18.2.
  • a fragment of an amino acid sequence comprises at least 80%, preferably at least 90%, 95%, 96%, 97%, 98%, or 99% of the amino acid residues from said amino acid sequence.
  • a fragment of an amino acid sequence selected from the group consisting of SEQ ID NOs: 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28 and 51 preferably relates to said sequence wherein 17, 18, 19, 20, 21, 22 or 23 amino acids at the N-terminus are removed.
  • an antibody having the ability of binding to CLDN18.2 comprises a heavy chain variable region (VH) comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 29, 30, 31, 32, 33, 34, and a fragment thereof.
  • an antibody having the ability of binding to CLDN18.2 comprises a light chain variable region (VL) comprising an amino acid sequence selected mom the group consisting of SEQ ID NO: 35, 36, 37, 38, 39, 40, 41, 42, 43, and a fragment thereof.
  • an antibody having the ability of binding to CLDN18.2 comprises a combination of heavy chain variable region (VH) and light chain variable region (VL) selected from the following possibilities (i) to (ix):
  • VH comprises an amino acid sequence represented by SEQ ID NO: 29 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 36 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 31 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 37 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 33 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 40 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 38 or a fragment thereof,
  • VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 41 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 42 or a fragment thereof,
  • the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 43 or a fragment thereof.
  • the antibodies according to (ii) or (v) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2". The antibody according to (v) is particularly preferred.
  • fragment refers, in particular, to one or more of the complementarity-determining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable region (VH) and/or of the light chain variable region (VL).
  • said one or more of the complementarity-determining regions (CDRs) are selected from a set of complementarity-determining regions CDR1, CDR2 and CDR3.
  • fragment refers to the complementarity- determining regions CDR1, CDR2 and CDR3 of the heavy chain variable region (VH) and/or of the light chain variable region (VL).
  • an antibody having the ability of binding to CLDN18.2 comprises a VH comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (vi):
  • CDR1 positions 45-52 of SEQ ID NO: 14
  • CDR2 positions 70-77 of SEQ ID NO: 14
  • CDR3 positions 116-125 of SEQ ID NO: 14
  • CDR1 positions 45-52 of SEQ ID NO: 15
  • CDR2 positions 70-77 of SEQ ID NO: 15
  • CDR3 positions 116-126 of SEQ ID NO: 15
  • CDR1 positions 45-52 of SEQ ID NO: 16
  • CDR2 positions 70-77 of SEQ ID NO: 16
  • CDR3 positions 116-124 of SEQ ID NO: 16
  • CDR1 positions 45-52 of SEQ ID NO: 17
  • CDR2 positions 70-77 of SEQ ID NO: 17
  • CDR3 positions 116-126 of SEQ ID NO: 17
  • CDR1 positions 45-53 of SEQ ID NO: 19
  • CDR2 positions 71-78 of SEQ ID NO: 19
  • CDR3 positions 117-128 of SEQ ID NO: 19.
  • an antibody having the ability of binding to CLDN18.2 comprises a VL comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (ix):
  • CDR1 positions 47-58 of SEQ ID NO: 20
  • CDR2 positions 76-78 of SEQ ID NO: 20
  • CDR3 positions 115-123 of SEQ ID NO: 20
  • CDR1 positions 49-53 of SEQ ID NO: 21
  • CDR2 positions 71-73 of SEQ ID NO: 21
  • CDR3 positions 110-118 of SEQ ED NO: 21
  • CDR1 positions 47-52 of SEQ ED NO: 22
  • CDR2 positions 70-72 of SEQ ED NO: 22
  • CDR3 positions 109-117 of SEQ ED NO: 22
  • CDR1 positions 47-58 of SEQ ED NO: 23
  • CDR2 positions 76-78 of SEQ ED NO: 23
  • CDR3 positions 115-123 of SEQ ED NO: 23
  • CDR1 positions 47-58 of SEQ ED NO: 25
  • CDR2 positions 76-78 of SEQ ED NO: 25
  • CDR3 positions 115-122 of SEQ ED NO: 25
  • CDR1 positions 47-52 of SEQ ED NO: 28
  • CDR2 positions 70-72 of SEQ ED NO: 28
  • CDR3 positions 109-117 of SEQ ED NO: 28.
  • an antibody having the ability of binding to CLDN18.2 comprises a combination of VH and VL each comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (ix):
  • VH CDR1: positions 45-52 of SEQ ED NO: 14
  • CDR2 positions 70-77 of SEQ ED NO:
  • CDR2 positions 71-73 of SEQ ED NO: 21
  • CDR3 positions 110-118 of SEQ ED NO: 21
  • VH CDR1: positions 45-52 of SEQ ED NO: 15, CDR2: positions 70-77 of SEQ ED NO:
  • CDR3 positions 116-126 of SEQ ED NO: 15, VL: CDR1: positions 47-58 of SEQ ED NO: 20, CDR2: positions 76-78 of SEQ ED NO: 20, CDR3: positions 115-123 of SEQ ED NO: 20,
  • VH CDR1: positions 45-52 of SEQ ED NO: 16
  • CDR2 positions 70-77 of SEQ ED NO:
  • CDR2 positions 70-72 of SEQ ED NO: 22
  • CDR3 positions 109-117 of SEQ ED NO: 22
  • VH CDRl: positions 45-53 of SEQ ID NO: 19
  • CDR2 positions 71-78 of SEQ ID NO: 19
  • CDR3 positions 117-128 of SEQ ID NO: 19
  • VL CDRl: positions 47-58 of SEQ ID NO: 23
  • CDR2 positions 76-78 of SEQ ID NO: 23
  • CDR3 positions 115-123 of SEQ ID NO: 23
  • VH CDRl: positions 45-53 of SEQ ID NO: 19
  • CDR2 positions 71-78 of SEQ ID NO: 19
  • CDR3 positions 117-128 of SEQ ID NO: 19
  • VL CDRl: positions 47-58 of SEQ ID NO:
  • CDR2 positions 76-78 of SEQ ID NO: 26
  • CDR3 positions 115-123 of SEQ ID NO: 26
  • VH CDRl: positions 45-53 of SEQ ID NO: 19
  • CDR2 positions 71-78 of SEQ ID NO: 19
  • CDR3 positions 117-128 of SEQ ID NO: 19
  • VL CDRl: positions 47-58 of SEQ ID NO:
  • CDR2 positions 76-78 of SEQ ID NO: 27
  • CDR3 positions 115-123 of SEQ ID NO: 27
  • VH CDRl: positions 45-53 of SEQ ID NO: 19
  • CDR2 positions 71-78 of SEQ ID NO: 19
  • CDR3 positions 117-128 of SEQ ID NO: 19
  • VL CDRl: positions 47-52 of SEQ ID NO:
  • the antibodies according to (ii) or (v) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2".
  • the antibody according to (v) is particularly preferred.
  • an antibody having the ability of binding to CLDN18.2 preferably comprises one or more of the complementarity-determining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable region (VH) and/or of the light chain variable region (VL) of a monoclonal antibody against CLDN18.2, preferably of a monoclonal antibody against CLDN18.2 described herein, and preferably comprises one or more of the complementarity-deterinining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable regions (VH) and/or light chain variable regions (VL) described herein.
  • CDRs complementarity-determining regions
  • VH heavy chain variable region
  • VL light chain variable region
  • said one or more of the complementarity-determining regions are selected from a set of complementarity- determining regions CDRl, CDR2 and CDR3 described herein.
  • an antibody having the ability of binding to CLDN18.2 preferably comprises the complementarity-detennining regions CDRl, CDR2 and CDR3 of the heavy chain variable region (VH) and/or of the light chain variable region (VL) of a monoclonal antibody against CLDN18.2, preferably of a monoclonal antibody against CLDN18.2 described herein, and preferably comprises the cxtmplementarity-determining regions CDR1, CDR2 and CDR3 of the heavy chain variable regions (VH) and/or light chain variable regions (VL) described herein.
  • an antibody comprising one or more CDRs, a set of CDRs or a combination of sets of CDRs as described herein comprises said CDRs together with their intervening framework regions.
  • the portion will also include at least about 50% of either or both of the first and fourth framework regions, the 50% being the C-terminal 50% of the first framework region and the N-terminal 50% of the fourth framework region.
  • Construction of antibodies made by recombinant DNA techniques may result in the introduction of residues N- or C-terminal to the variable regions encoded by linkers introduced to facilitate cloning or other manipulation steps, including the introduction of linkers to join variable regions of the invention to farmer protein sequences including immunoglobulin heavy chains, other variable domains (for example in the production of diabodies) or protein labels.
  • an antibody comprising one or more CDRs, a set of CDRs or a combination of sets of CDRs as described herein comprises said CDRs in a human antibody framework.
  • Reference herein to an antibody comprising with respect to the heavy chain thereof a particular chain, or a particular region or sequence preferably relates to the situation wherein all heavy chains of said antibody comprise said particular chain, region or sequence. This applies correspondingly to the light chain of an antibody.
  • an antibody having the ability of binding to CLDN18.2 according to the invention relates to an antibody which recognizes, i.e. binds to, the same or essentially the same epitope as a CLDN18.2-binding antibody described herein, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
  • endocytosis refers to the process where eukaryotic cells internalize segments of plasma membrane, cell-surface receptors and components from the extracellular fluid. Endocytosis mechanisms include receptor mediated endocytosis.
  • receptor-mediated endocytosis refers to a biological mechanism by which a ligand, upon binding to its target, triggers membrane invagination and pinching, gets internalized and delivered into cytosol or transferred to appropriate intracellular compartments.
  • a "binding agent to CLDN18.2” includes any compound that has a binding capacity to CLDN18.2.
  • such binding agent comprises at least one binding domain for CLDN18.2.
  • the term includes all artificial binding molecules (scaffolds) having a binding capacity to CLDN18.2 including but not limited to nanobodies, affibodies, anticalins, DARPins, monobodies, avimers, and microbodies.
  • said binding agent binds to an extracellular domain of CLDN18.2.
  • said binding agent binds to native epitopes of CLDN18.2 present on the surface of living cells. In one embodiment said binding agent binds to the first extracellular loop of CLDN18.2. In one embodiment said binding to CLDN18.2 is a specific binding.
  • binding domain characterizes in connection with the present invention a structure, e.g. of an antibody, which binds to/interacts with a given target structure/antigen/epitope.
  • binding domain designates an "antigen-interaction-site".
  • any agent that exerts a therapeutic effect on cancer cells can be used as the drug for conjugation to an anti-CLDN18.2 antibody or derivative thereof.
  • conjugation of the drug does not alter or significantly alter the binding characteristics, in particular the specificity, of the antibody, as discussed herein.
  • the antibody-drug conjugate according to the invention preferably has the same or essentially the same binding characteristics, in particular the specificity, as the antibody used for conjugation. Accordingly, if certain binding characteristics are described herein for the antibody used for conjugation, it is preferred that also the antibody-drug conjugate has such binding characteristics.
  • the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2 and/or binds to the first extracellular loop of CLDN18.2, it is preferred that also the antibody-drug conjugate binds to an extracellular domain of CLDN18.2 and/or binds to the first extracellular loop of CLDN18.2.
  • the drug is a cytotoxic or cytostatic agent.
  • a cytotoxin or cytotoxic agent includes any agent that is detrimental to and, in particular, kills cells.
  • cytotoxic agents include, for example, antitubulin agents, DNA minor groove binders (e.g., enediynes and lexitropsins), DNA replication inhibitors, alkylating agents (e.g., platinum complexes such as cis-platin, mono(platinum), bis(platinum) and tri- nuclear platinum complexes and carboplatin), anthracyclines, antibiotics, antifolates, antimetabolites, chemotherapy sensitizers, duocarmycins, etoposides, fluorinated pyrimidines, ionophores, nitrosoureas, platinols, pre-forming compounds, purine antimetabolites, puromycins, radiation sensitizers, steroids, taxanes (e.g., paclitaxel and docetaxel), topoisomerase inhibitors, vinca alkaloids, or the like.
  • alkylating agents e.g., platinum complexes such as cis-platin, mono(
  • cytotoxic agents include, for example, an androgen, anthramycin (AMC), asparaginase, 5-azacytidine, azathioprine, bleomycin, busulfan, buthionine sulfoximine, camptothecin, carboplatin, carmustine (BSNU), CC-1065, chlorambucil, cisplatin, colchicine, cyclophosphamide, cytarabine, cytidine arabinoside, cytochalasin B, dacarbazine, dactinomycin (formerly actinomycin), daunorubicin, decarbazine, docetaxel, doxorubicin, an estrogen, S-fluordeoxyuridine, 5-fluorouracil, gramicidin D, hydroxyurea, idarubicin, ifosfamide, irinotecan, lomustine (CCNU), mecMorethamine, melphalan, 6-
  • anti-tubulin agents include, but are not limited to, dolastatins (e.g., auristatin E, AFP, MMAF, MMAE, AEB, AEVB), maytansinoids, taxanes (e.g., paclitaxel, docetaxel), T67 (Tularik), vinca alkyloids (e.g., vincristine, vinblastine, vindesine, and vinorelbine), baccatin derivatives, taxane analogs (e.g., epothilone A and B), nocodazole, colchicine and colcimid, estramustine, cryptophysins, cemadotin, combretastatins, discodermolide, and eleutherobin.
  • dolastatins e.g., auristatin E, AFP, MMAF, MMAE, AEB, AEVB
  • maytansinoids e.g., paclitaxel,
  • the cytotoxic or cytostatic agent is auristatin E (also known in the art as dolastatin-10) or a derivative thereof.
  • the auristatin E derivative is, e.g., an ester formed between auristatin E and a keto acid.
  • auristatin E can be reacted with paraacetyl benzoic acid or benzoylvaleric acid to produce AEB and AEVB, respectively.
  • Other typical auristatin derivatives include AFP, MMAF, and MMAE.
  • the cytotoxic or cytostatic agent is a maytansinoid, another group of anti-tubulin agents.
  • the maytansinoid is maytansine, DM-1 orDM-4.
  • Maytansinoids are potent microtubule-targeted compounds that inhibit proliferation of cells at mitosis.
  • Maytansinoids are derivatives of maytansine which is a 19-membered ansa macrolide structure attached to a chlorinated benzene ring.
  • Maytansine has the following formula:
  • Maytansinoids are well known in the art and can be synthesized by known techniques or isolated from natural sources.
  • Particularly preferred maytansinoids according to the invention are the thiol-containing derivatives of maytansine, such as DM1 and DM4.
  • Such thiol- containing derivatives of maytansine include compounds wherein the methyl group bound to the carbonyl group is replaced by a group containg a tree sulfhydryl group such as the group - R-SH where R represents an alkylene group or other carbon-containing group of atoms.
  • DM1 also known as mertansine, is a maytansinoid having the following formula:
  • mertansine or “DM1” refers to the compound N ⁇ -deacetyl-N 2 '- ⁇ - mercapto- 1 -oxopropyl)-maytansine.
  • DM4 refers to the compound -deacetyl-N 2 -(4-methyl-4-mercapto- 1 -oxopentyl)- maytansine.
  • Anti-CLDN18.2 antibody-maytansinoid conjugates may be prepared by chemically linking an anti-CLDN18.2 antibody to a maytansinoid molecule without significantly diminishing the biological activity of either the antibody or the maytansinoid molecule.
  • An average of 3-4 maytansinoid molecules may be conjugated per antibody molecule, although even one molecule of toxin/antibody is expected to enhance cytotoxicity over the use of naked antibody.
  • the term "antibody covalently attached to at least one toxin drug moiety” includes situations where one or more molecules of the same drug are covalently attached to an antibody molecule as well as where different drugs are covalently attached to an antibody molecule. In the latter situation, one or more molecules of each of the different drugs may be attached to an antibody molecule, or a combination thereof (e.g. one molecule of one drug is attached while several molecules of another drug are attached). In some embodiments of the invention, an antibody is conjugated to dolastatins or dolostatin peptidic analogs and derivatives, the auristatins (US Patent Nos. 5,635,483; 5,780,588, herein incorporated by reference).
  • Auristatins are synthetic analogs of dolostatin 10, a natural product derived from a marine mollusk, Dolabela auricularia. Like the maytansinoids, auristatins are microtubule disrupters.
  • the dolastatin or auri statin drug moiety may be attached to the antibody through the N (amino) terminus or the C (carboxyl) terminus of the peptidic drug moiety.
  • Exemplary auristatin embodiments include monomethylauri statin drug moieties such as MMAE and MMAF which preferably are N-terminus linked.
  • MMAE also known as Monomethyl auristatin E, has the following formula:
  • MMAE refers to the compound (S>N-((3R,4S,5S)-l-((S)-2- (( 1 R,2R)-3-((( 1 S,2R)- 1 -hydroxy- 1 -phenylpropan-2-yl)amino> 1 -methoxy-2-methyl-3 - oxopropyl)pyrrolidin- 1 -yl)-3 -methoxy-5-methyl-l -oxoheptan-4-yl)-N,3 -dimethyl-2-((S)-3 - methyl-2-(methylaniino)butanamido)butanarnide.
  • MMAE is actually desmethyl-auristatin E, i.e., the N-tenninal amino group has only one methyl substituent instead of two as in auristatin E itself.
  • antibody-vcAuristatin conjugates such as antibody-vcMMAE conjugates.
  • the term "antibody-vcAuristatin” or “vcMMAE” refers to an antibody-drug conjugate (ADC) comprising an auristatin such as MMAE, linked via a linker comprising the lysosomally cleavable dipeptide, valine-citrulline (vc), to the antibody.
  • ADC antibody-drug conjugate
  • MMAF also known as Monomethyl auri statin F, refers to the compound (S)-2- ⁇ (2R,3R)-3- ((S>H(3MS,5S) ⁇ (S)-N,3-dmethyl-2-((S)-3-methyl-2-
  • antibody-drug conjugates can be accomplished by any technique known to the skilled artisan.
  • Antibody-drug conjugates can be prepared by binding the drug to an antibody in accordance with a conventional technique.
  • An antibody and a drug may be directly bound to each other via their own linker groups or indirectly via a linker or other substance.
  • a number of different reactions are available for covalent attachment of drugs to antibodies. This is often accomplished by reaction of the amino acid residues of the antibody molecule, including the amine groups of lysine, the free carboxylic acid groups of glutamic and aspartic acid, the sulfhydryl groups of cysteine and the various moieties of the aromatic amino acids.
  • One of the most commonly used non-specific methods of covalent attachment is the carbodiimide reaction to link a carboxy (or amino) group of a compound to amino (or carboxy) groups of the antibody.
  • bifunctional agents such as dialdehydes or imidoesters have been used to link the amino group of a compound to amino groups of the antibody molecule.
  • the Schiff base reaction is also available for attachment of drugs to antibodies.
  • This method involves the periodate oxidation of a drug that contains glycol or hydroxy groups, thus forming an aldehyde which is then reacted with the antibody molecule. Attachment occurs via formation of a Schiff base with amino groups of the antibody molecule.
  • Isothiocyanates can also be used as coupling agents for covalently attaching drugs to antibodies. Other techniques are known to the skilled artisan and within the scope of the present invention.
  • a linker preferably comprises one or more functional groups that react with either or bom of the antibody and the drug.
  • functional groups include amino, carboxyl, mercapto, maleimide, and pyridinyl groups.
  • an antibody is linked with a drug via a bifunctional crosslinking reagent.
  • a bifunctional crosslinking reagent refers to a reagent that possesses two reactive groups one of which is capable of reacting with an antibody, while the other one is capable of reacting with the drug to link the antibody with the drug, thereby forming a conjugate.
  • Any suitable bifunctional crosslinking reagent can be used in connection with the invention, so long as the linker reagent provides for retention of the drug, e.g., cytotoxicity, and targeting characteristics of the antibody.
  • the linker molecule joins the drug to the antibody through chemical bonds, such that the drug and the antibody are chemically coupled (e.g., covalently bonded) to each other.
  • the bifunctional crosslinking reagent comprises non-cleavable linkers.
  • a non-cleavable linker is any chemical moiety that is capable of linking a drug, such as a maytansinoid, to an antibody in a stable, covalent manner.
  • a non-cleavable linker is not cleavable under physiological conditions, in particular inside a cell.
  • non-cleavable linkers are substantially resistant to acid-induced cleavage, light-induced cleavage, peptidase- induced cleavage, esterase-induced cleavage, and disulfide bond cleavage, at conditions under which the drug or the antibody remains active.
  • Suitable crosslinking reagents mat form non- cleavable linkers between a drug and an antibody are well known in the art
  • the drug is linked to the antibody through a thioether bond.
  • the linking reagent is a cleavable linker.
  • a cleavable linker is cleavable under physiological conditions, in particular inside a cell.
  • suitable cleavable linkers include disulfide linkers, acid labile linkers, photolabile linkers, peptidase labile linkers, and esterase labile linkers.
  • linkers include, but are not limited to, N-succinimidyl-3-(2-aminoethyl)-2-aminoethyl-(2-aminoethyl)-2-aminoethyl-(2-aminoethyl)-2-aminoethyl-(2-aminoethyl)-2-aminoethyl-(2-aminoethyl)-2-succinimidyl-3-(2-aminoe
  • peptide linker such as valine-citrulline (Val-Cit) or alanine-phenylalanine (ala-phe) may also be used, and any of the aforementioned linkers may be used in adequate combination.
  • Disulfide containing linkers are linkers cleavable through disulfide exchange, which can occur under physiological conditions.
  • the linker is cleavable under reducing conditions (e.g., a disulfide linker).
  • disulfide linkers are known in the art, including, for example, those that can be formed using SATA (N-succinimidyl-5- acetylthioacetate), SPDP (N-succinimidyW-(2-pyridyl(htMo)pro SPDB (N- succinimidyl-3-(2-pyridyl(limio)butyrate) and SMPT (N-succinimidyl-oxycarbonyl-alpha- memyl-alpha-(2-pyridyl-dithio)toluene).
  • SATA N-succinimidyl-5- acetylthioacetate
  • SPDP N-succinimidyW-(2-pyridyl(htMo)pro SPDB (N- succinimidyl-3-(2-pyridyl(limio)butyrate)
  • SMPT N-succinimidyl-oxycarbonyl-alpha-
  • Acid labile linkers are linkers cleavable at acid pH.
  • certain intracellular compartments such as endoscmes and lysosomes, have an acidic pH (pH 4-5), and provide conditions suitable to cleave acid labile linkers.
  • Acid labile linkers are relatively stable under neutral pH conditions, such as those in the blood, but are unstable at below pH 5.5 or 5.0.
  • a hydrazone, semicarbazone, thiosemicarbazone, cis-aconitic amide, orthoester, acetal, ketal, or the like can be used.
  • Photolabile linkers are useful at the body surface and in many body cavities that are accessible to light. Furthermore, infrared light can penetrate tissue.
  • Peptidase labile linkers can be used to cleave certain peptides inside or outside cells.
  • the cleavable linker is cleaved under mild conditions, i.e., conditions within a cell under which the activity of the cytotoxic agent is not affected.
  • the linker can be or can comprise, e.g., a peptidyl linker that is cleaved by an intracellular peptidase or protease enzyme, including, but not limited to, a lysosomal or endosomal protease.
  • the peptidyl linker is at least two amino acids long or at least three amino acids long.
  • Cleaving agents can include cathepsins B and D and plasmin, all of which are known to hydrolyze dipeptide drug derivatives resulting in the release of active drug inside target cells.
  • a peptidyl linker mat is cleavable by the thiol-dependent protease cathepsin-B, which is highly expressed in cancerous tissue, can be used (e.g., a Phe-Leu or a Gly-Phe-Leu-Gly linker).
  • the peptidyl linker cleavable by an intracellular protease is a valine- citrulline (V al-Cit; vc) linker or a phenylalanine-lysine (Phe- Lys) linker.
  • V al-Cit; vc valine- citrulline
  • Phe- Lys phenylalanine-lysine
  • the linker according to the invention comprises or consists of the dipeptide valine (Val) - citrulline (Cit) (vc), which is cleaved by cathepsin inside tumour cells.
  • the drug is a maytansinoid such as DM4 which is coupled to an antibody having the ability of binding to CLDN18.2 via an amino and sulmydryl reactive heterobifunctional protein crosslinker which reacts with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and with the sulhydryl group of the maytansinoid to yield a reversible disulfide bond.
  • DM4 maytansinoid such as DM4 which is coupled to an antibody having the ability of binding to CLDN18.2 via an amino and sulmydryl reactive heterobifunctional protein crosslinker which reacts with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and with the sulhydryl group of the maytansinoid to yield a reversible disulfide bond.
  • the amino and sulmydryl reactive heterobifunctional protein crosslinker is SPDB (N-succinimidyl-3 - ⁇ 2- pyridyldithio)butyrate), which reacts via an N-hydroxysuariniinide (NHS) ester with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and via a pyridinyldisulfide group with the sulhydryl group of DM4 to yield a reversible disulfide bond (Figure 1).
  • SPDB N-succinimidyl-3 - ⁇ 2- pyridyldithio
  • the drug is an auristatin such as MMAE which is coupled to an antibody having the ability of binding to CLDN18.2 via a peptide linker such as a cathepsin cleavable peptide linker, in particular Val-Cit (vc).
  • a peptide linker such as a cathepsin cleavable peptide linker, in particular Val-Cit (vc).
  • the antibody having the ability of binding to CLDN18.2 is thiolated, e.g. with the heterobifunctional linker 2- ⁇ (2- iminothiolane) which reacts with free amines of lysine residues.
  • an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to DM4 (preferably through its sulmydryl group).
  • the antibody is coupled to DM4 through a SPDB linker.
  • an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or SI or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to DM4 (preferably through its sulfhydryl group).
  • the antibody is coupled to DM4 through a SPDB linker.
  • an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to MMAE (preferably through its N-terminal amino group).
  • the antibody is coupled to MMAE through a linker comprising the dipeptide vc.
  • an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or SI or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to MMAE (preferably through its N-terminal amino group).
  • the antibody is coupled to MMAE through a linker comprising the dipeptide vc.
  • nucleic acid is intended to include DNA and RNA.
  • a nucleic acid may be single-stranded or double-stranded, but preferably is double-stranded DNA.
  • the term "expression” is used in its most general meaning and comprises the production of RNA or of RNA and protein/peptide. It also comprises partial expression of nucleic acids. Furthermore, expression may be carried out transiently or stably.
  • the teaching given herein with respect to specific amino acid sequences e.g. those shown in the sequence listing, in particular those referred to herein by indicating a SEQ ID NO:, is to be construed so as to also relate to variants of said specific sequences.
  • Such variant sequences may be functionally equivalent to said specific sequences, e.g. amino acid sequences exhibiting properties identical or similar to those of the specific amino acid sequences.
  • One important property is to retain binding of an antibody to its target.
  • a sequence which is a variant with respect to a specific sequence when it replaces the specific sequence in an antibody retains binding of said antibody to CLDN18.2.
  • CDR regions will be either identical or highly homologous to the regions of antibodies specified herein.
  • highly homologous it is contemplated that from 1 to S, preferably from 1 to 4, such as 1 to 3 or 1 or 2 substitutions may be made in the CDRs.
  • the hypervariable and variable regions may be modified so that they show substantial homology with the regions of antibodies specifically disclosed herein.
  • allelic variant refers, in particular, to mutants, splice variants, conformations, isoforms, allelic variants, species variants and species homologs, in particular those which are naturally present
  • An allelic variant relates to an alteration in the normal sequence of a gene, the significance of which is often unclear.
  • Complete gene sequencing often identifies numerous allelic variants for a given gene.
  • a species homolog is a nucleic acid or amino acid sequence with a different species of origin from that of a given nucleic acid or amino acid sequence.
  • variant shall encompass any posttranslationally modified variants and conformation variants.
  • variants of an amino acid sequence comprise amino acid insertion variants, amino acid addition variants, amino acid deletion variants and/or amino acid substitution variants.
  • Amino acid deletion variants that comprise the deletion at the N-terminal and/or C-terminal end of the protein are also called N-terminal and/or C-terminal truncation variants.
  • Amino acid insertion variants comprise insertions of single or two or more amino acids in a particular amino acid sequence.
  • amino acid sequence variants having an insertion one or more amino acid residues are inserted into a particular site in an amino acid sequence, although random insertion with appropriate screening of the resulting product is also possible.
  • Amino acid addition variants comprise amino- and/or carboxy-terminal fusions of one or more amino acids, such as 1, 2, 3, 5, 10, 20, 30, SO, or more amino acids.
  • Amino acid deletion variants are characterized by the removal of one or more amino acids from the sequence, such as by removal of 1, 2, 3, S, 10, 20, 30, SO, or more amino acids.
  • the deletions may be in any position of the protein.
  • Amino acid substitution variants are characterized by at least one residue in the sequence being removed and another residue being inserted in its place. Preference is given to the modifications being in positions in the amino acid sequence which are not conserved between homologous proteins or peptides and/or to replacing amino acids with other ones having similar properties.
  • amino acid changes in protein variants are conservative amino acid changes, i.e., substitutions of similarly charged or uncharged amino acids.
  • a conservative amino acid change involves substitution of one of a family of amino acids which are related in their side chains.
  • Naturally occurring amino acids are generally divided into four families: acidic (aspartate, glutamate), basic (lysine, arginine, histidine), non-polar (alanine, valine, leucine, isoleucine, proline, phenylalanine, methionine, tryptophan), and uncharged polar (glycine, asparagine, glutamine, cysteine, serine, threonine, tyrosine) amino acids. Phenylalanine, tryptophan, and tyrosine are sometimes classified jointly as aromatic amino acids.
  • the degree of similarity, preferably identity between a given amino acid sequence, such as an amino acid sequence referred to herein by indicating a SEQ ID NO:, and an amino acid sequence which is a variant of said given amino acid sequence will be at least about 60%, 65%, 70%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99%.
  • the degree of similarity or identity is given preferably for an amino acid region which is at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90% or about 100% of the entire length of the reference amino acid sequence.
  • the degree of similarity or identity is given preferably for at least about 20, at least about 40, at least about 60, at least about 80, at least about 100, at least about 120, at least about 140, at least about 160, at least about 180, or about 200 amino acids, preferably continuous amino acids.
  • the degree of similarity or identity is given for the entire length of the reference amino acid sequence.
  • sequence similarity preferably sequence identity
  • sequence identity can be done with art known tools, preferably using the best sequence alignment, for example, using Align, using standard settings, preferably EMBOSS::needle, Matrix: Blosum62, Gap Open 10.0, Gap Extend 0.5.
  • Sequence similarity indicates the percentage of amino acids that either are identical or that represent conservative amino acid substitutions.
  • Sequence identity indicates the percentage of amino acids mat are identical between the sequences.
  • percentage identity is intended to denote a percentage of amino acid residues which are identical between the two sequences to be compared, obtained after the best alignment, this percentage being purely statistical and the differences between the two sequences being distributed randomly and over their entire length.
  • Sequence comparisons between two amino acid sequences are conventionally carried out by comparing these sequences after having aligned them optimally, said comparison being carried out by segment or by "window of comparison” in order to identify and compare local regions of sequence similarity.
  • the optimal alignment of the sequences for comparison may be produced, besides manually, by means of the local homology algorithm of Smith and Waterman, 1981, Ads App. Math. 2, 482, by means of the local homology algorithm of Neddleman and Wunsch, 1970, J. Mol. Biol.
  • transgenic animal refers to an animal having a genome comprising one or more transgenes, preferably heavy and/or light chain trans genes, or transchromosomes (either integrated or non-integrated into the animal's natural genomic DNA) and which is preferably capable of expressing the transgenes.
  • a transgenic mouse can have a human light chain transgene and either a human heavy chain transgene or human heavy chain transchromosome, such that the mouse produces human anti-CLDN18.2 antibodies when immunized with CLDN18.2 antigen and/or cells expressing CLDN18.2.
  • the human heavy chain transgene can be integrated into the chromosomal DNA of the mouse, as is the case for transgenic mice, e.g., HuMAb mice, such as HCo7 or HCol2 mice, or the human heavy chain transgene can be maintained extrachromosomally, as is the case for transchromosomal (e.g., KM) mice as described in WO 02/43478.
  • Such transgenic and transchromosomal mice may be capable of producing multiple i so types of human monoclonal antibodies to CLDN18.2 (e.g., IgG, IgA and/or IgE) by undergoing V-D-J recombination and isotype switching.
  • CLDN18.2 e.g., IgG, IgA and/or IgE
  • Reduce means an overall decrease or the ability to cause an overall decrease, preferably of 5% or greater, 10% or greater, 20% or greater, more preferably of 50% or greater, and most preferably of 75% or greater, in the level, e.g. in the level of expression or in the level of proliferation of cells.
  • Terms such as "increase” or “enhance” preferably relate to an increase or enhancement by about at least 10%, preferably at least 20%, preferably at least 30%, more preferably at least 40%, more preferably at least 50%, even more preferably at least 80%, and most preferably at least 100%, at least 200%, at least 500%, at least 1000%, at least 10000% or even more.
  • Antibodies described herein can be produced by a variety of techniques, including conventional monoclonal antibody methodology, e.g., the standard somatic cell hybridization technique of Kohler and Milstein, Nature 256: 495 (1975). Although somatic cell hybridization procedures are preferred, in principle, other techniques for producing monoclonal antibodies can be employed, e.g., viral or oncogenic transformation of B- lymphocytes or phage display techniques using libraries of antibody genes.
  • the preferred animal system for preparing hybridomas that secrete monoclonal antibodies is the murine system.
  • Hybridoma production in the mouse is a very well established procedure. Immunization protocols and techniques for isolation of immunized splenocytes for fusion are known in the art. Fusion partners (e.g., murine myeloma cells) and fusion procedures are also known.
  • hybridomas that secrete monoclonal antibodies are the rat and the rabbit system (e.g. described in Spieker-Polet et al., Proc. Natl. Acad. Sci. U.S.A. 92:9348 (1995), see also Rossi et al., Am. J. Clin. Pathol. 124: 295 (2005)).
  • human monoclonal antibodies can be generated using transgenic or transchromosomal mice carrying parts of the human immune system rather than the mouse system.
  • transgenic and transchromosomic mice include mice known as HuMAb mice and KM mice, respectively, and are collectively referred to herein as "transgenic mice.”
  • the production of human antibodies in such transgenic mice can be performed as described in detail for CD20 in WO2004035607
  • Yet another strategy for generating monoclonal antibodies is to directly isolate genes encoding antibodies from lymphocytes producing antibodies of defined specificity e.g. see Babcock et al., 1996; A novel strategy for generating monoclonal antibodies from single, isolated lymphocytes producing antibodies of defined specificities.
  • a novel strategy for generating monoclonal antibodies from single, isolated lymphocytes producing antibodies of defined specificities For details of recombinant antibody engineering see also Welschof and Kraus, Recombinant antibodes for cancer therapy ISBN-0-89603-918-8 and Benny K.C. Lo Antibody Engineering ISBN 1-58829-092-1.
  • mice can be immunized with carrier-conjugated peptides derived from the antigen sequence, i.e. the sequence against which the antibodies are to be directed, an enriched preparation of recombinantly expressed antigen or fragments thereof and/or cells expressing the antigen, as described.
  • mice can be immunized with DNA encoding the antigen or fragments thereof.
  • mice can also be immunized with cells expressing the antigen, e.g., a cell line, to promote immune responses.
  • the immune response can be monitored over the course of the immunization protocol with plasma and serum samples being obtained by tail vein or retroorbital bleeds. Mice with sufficient titers of immunoglobulin can be used for fusions. Mice can be boosted intraperitonealy or intravenously with antigen expressing cells 3 days before sacrifice and removal of the spleen to increase the rate of specific antibody secreting hybridomas.
  • splenocytes and lymph node cells from immunized mice can be isolated and fused to an appropriate immortalized cell line, such as a mouse myeloma cell line. The resulting hybridomas can then be screened for the production of antigen-specific antibodies.
  • Antibodies also can be produced in a host cell transfectoma using, for example, a combination of recombinant DNA techniques and gene transfection methods as are well known in the ait (Morrison, S. (1985) Science 229: 1202).
  • the gene(s) of interest e.g., antibody genes
  • an expression vector such as a eukaryotic expression plasmid such as used by the GS gene expression system disclosed in WO 87/04462, WO 89/01036 and EP 338 841 or other expression systems well known in the art.
  • the purified plasmid with the cloned antibody genes can be introduced in eukaryotic host cells such as CHO cells, NS/0 cells, HEK293T cells or HEK293 cells or alternatively other eukaryotic cells like plant derived cells, fungal or yeast cells.
  • the method used to introduce these genes can be methods described in the art such as electroporation, lipofectine, lipofectamine or others. After introduction of these antibody genes in the host cells, cells expressing the antibody can be identified and selected. These cells represent the transfectomas which can then be amplified for their expression level and upscaled to produce antibodies. Recombinant antibodies can be isolated and purified from these culture supernatants and/or cells.
  • the cloned antibody genes can be expressed in other expression systems, including prokaryotic cells, such as microorganisms, e.g. E. coli.
  • the antibodies can be produced in transgenic non-human animals, such as in milk from sheep and rabbits or in eggs from hens, or in transgenic plants; see e.g. Verma, R., et al. (1998) J. Immunol. Meth. 216: 165-181; Pollock, et al. (1999) J. Immunol. Meth. 231: 147-157; and Fischer, R., et al. (1999) Biol. Chem. 380: 825-839. Chimerization
  • Chimeric antibodies are antibodies, the different portions of which are derived from different animal species, such as those having a variable region derived from a murine antibody and a human immunoglobulin constant region. Chimerisation of antibodies is achieved by joining of the variable regions of the murine antibody heavy and light chain with the constant region of human heavy and light chain (e.g. as described by Kraus et al., in Methods in Molecular Biology series, Recombinant antibodies for cancer therapy ISBN-0-89603-918-8). In a preferred embodiment chimeric antibodies are generated by joining human kappa-light chain constant region to murine light chain variable region.
  • chimeric antibodies can be generated by joining human lambda-light chain constant region to murine light chain variable region.
  • the preferred heavy chain constant regions for generation of chimeric antibodies are IgGl, IgG3 and IgG4.
  • Other preferred heavy chain constant regions for generation of chimeric antibodies are IgG2, IgA, IgD and IgM.
  • Antibodies interact with target antigens predominantly through amino acid residues that are located in the six heavy and light chain complementarity detennining regions (CDRs). For this reason, the amino acid sequences within CDRs are more diverse between individual antibodies than sequences outside of CDRs. Because CDR sequences are responsible for most antibody-antigen interactions, it is possible to express recombinant antibodies that mimic the properties of specific naturally occurring antibodies by constructing expression vectors that include CDR sequences from the specific naturally occurring antibody grafted onto framework sequences from a different antibody with different properties (see, e.g., Riechmann, L. et al. (1998) Nature 332: 323-327; Jones, P. et al. (1986) Nature 321: 522-525; and Queen, C.
  • Such framework sequences can be obtained from public DNA databases that include germline antibody gene sequences. These germline sequences will differ from mature antibody gene sequences because they will not include completely assembled variable genes, which are formed by V (D) J joining during B cell maturation. Germline gene sequences will also differ from the sequences of a high affinity secondary repertoire antibody at individual evenly across the variable region. The ability of antibodies to bind an antigen can be determined using standard binding assays (e.g., ELISA, Western Blot, Immunofluorescence and flow cytometric analysis).
  • hybridomas can be grown in two-liter spinner-flasks for monoclonal antibody purification.
  • antibodies can be produced in dialysis based bioreactors. Supernatants can be filtered and, if necessary, concentrated before affinity chromatography with protein G-sepharose or protein A-sepharose. Eluted IgG can be checked by gel electrophoresis and high performance liquid chromatography to ensure purity. The buffer solution can be exchanged into PBS, and the concentration can be determined by OD280 using 1.43 extinction coefficient.
  • the monoclonal antibodies can be aliquoted and stored at -80°C.
  • site-directed or multi-site directed mutagenesis can be used.
  • isotype ELISAs with various commercial kits (e.g. Zymed, Roche Diagnostics) can be performed.
  • Wells of microtiter plates can be coated with anti-mouse Ig. After blocking, the plates are reacted with monoclonal antibodies or purified isotype controls, at ambient temperature for two hours. The wells can then be reacted with either mouse IgGl, IgG2a, IgG2b or IgG3, IgA or mouse IgM-specific peroxidase- conjugated probes. After washing, the plates can be developed with ABTS substrate (1 mg/ml) and analyzed at OD of 405-650. Alternatively, the IsoStrip Mouse Monoclonal Antibody Isotyping Kit (Roche, Cat. No. 1493027) may be used as described by the manufacturer.
  • flow cytometry can be used.
  • Cell lines expressing naturally or after transfection antigen and negative controls lacking antigen expression grown under standard growth conditions
  • the APC- or Alexa647-labeled ami IgG antibody can bind to antigen-bound monoclonal antibody under the same conditions as the primary antibody staining.
  • the samples can be analyzed by flow cytometry with a FACS instrument using light and side scatter properties to gate on single, living cells.
  • the method of co-transfection can be employed.
  • Cells transiently transfected with plasmids encoding antigen and a fluorescent marker can be stained as described above.
  • Transfected cells can be detected in a different fluorescence channel than antibody-stained cells.
  • An alternative assay using fluorescence microscopy may be used in addition to or instead of the flow cytometry assay.
  • Cells can be stained exactly as described above and examined by fluorescence microscopy.
  • immunofluorescence microscopy analysis can be used.
  • cell lines expressing either spontaneously or after transfection antigen and negative controls lacking antigen expression are grown in chamber slides under standard growth conditions in DMEM/F12 medium, supplemented with 10 % fetal calf serum (FCS), 2 mM L-glutamine, 100 IU/ml penicillin and 100 ⁇ streptomycin.
  • FCS fetal calf serum
  • Cells can then be fixed with methanol or paraformaldehyde or left untreated.
  • Cells can then be reacted with monoclonal antibodies against the antigen for 30 min. at 25°C. After washing, cells can be reacted with an AlexaSSS-labelled anti-mouse IgG secondary antibody (Molecular Probes) under the same conditions. Cells can then be examined by fluorescence microscopy.
  • Cell extracts from cells expressing antigen and appropriate negative controls can be prepared and subjected to sodium dodecyl sulfate (SDS) polyacrylamide gel electrophoresis. After electrophoresis, the separated antigens will be transferred to nitrocellulose membranes, blocked, and probed with the monoclonal antibodies to be tested. IgG binding can be detected using anti-mouse IgG peroxidase and developed with ECL substrate.
  • SDS sodium dodecyl sulfate
  • Antibodies can be further tested for reactivity with antigen by Immunohistochemistry in a manner well known to the skilled person, e.g. using paraformaldehyde or acetone fixed cryosections or paraffin embedded tissue sections fixed with paraformaldehyde from non- cancer tissue or cancer tissue samples obtained from patients during routine surgical procedures or from mice carrying xenografted tumors inoculated with cell lines expressing spontaneously or after transfection antigen.
  • antibodies reactive to antigen can be incubated followed by horseradish-peroxidase conjugated goat anti-mouse or goat anti-rabbit antibodies (DAKO) according to the vendors instructions.
  • Antibody conjugates which bind to CLDN18.2 also can be tested in an in vivo model (e.g. in immune deficient mice carrying xenografted tumors inoculated with cell lines expressing CLDN18.2, e.g. DAN-G, SNU-16, or ⁇ - ⁇ , or after transfection, e.g. HEK293) to determine their efficacy in controlling growth of CLDN18.2-expressing tumor cells.
  • an in vivo model e.g. in immune deficient mice carrying xenografted tumors inoculated with cell lines expressing CLDN18.2, e.g. DAN-G, SNU-16, or ⁇ - ⁇ , or after transfection, e.g. HEK293
  • Antibody conjugates can be administered to tumor free mice followed by injection of tumor cells to measure the effects of the antibody conjugates to prevent formation of tumors or tumor-related symptoms. Antibody conjugates can be administered to tumor-bearing mice to determine the therapeutic efficacy of respective antibody conjugates to reduce tumor growth, metastasis or tumor related symptoms. Antibody conjugate application can be combined with application of other substances as cytostatic drugs, growth factor inhibitors, cell cycle blockers, angiogenesis inhibitors or other antibodies to determine synergistic efficacy and potential toxicity of combinations. To analyze toxic side effects mediated by antibody conjugates animals can be inoculated with antibody conjugates or control reagents and thoroughly investigated for symptoms possibly related to CLDN18.2 antibody conjugate therapy. Possible side effects of in vivo application of CLDN18.2 antibody conjugates particularly include toxicity at CLDN18.2 expressing tissues including stomach.
  • the compounds and agents described herein may be administered in the form of any suitable pharmaceutical composition.
  • compositions are preferably sterile and contain an effective amount of the antibody conjugates described herein and optionally of further agents as discussed herein to generate the desired reaction or the desired effect.
  • Pharmaceutical compositions ace usually provided in a uniform dosage form and may be prepared in a manner known per se.
  • a pharmaceutical composition may e.g. be in the form of a solution or suspension.
  • a pharmaceutical composition may comprise salts, buffer substances, preservatives, carriers, diluents and/or excipients all of which are preferably pharmaceutically acceptable.
  • pharmaceutically acceptable refers to the non-toxicity of a material which does not interact with the action of the active component of the pharmaceutical composition.
  • Salts which are not pharmaceutically acceptable may used for preparing pharmaceutically acceptable salts and are included in the invention.
  • Pharmaceutically acceptable salts of this kind comprise in a non limiting way those prepared from the following acids: hydrochloric, hydrobromic, sulfuric, nitric, phosphoric, maleic, acetic, salicylic, citric, formic, malonic, succinic acids, and the like.
  • Pharmaceutically acceptable salts may also be prepared as alkali metal salts or alkaline earth metal salts, such as sodium salts, potassium salts or calcium salts.
  • Suitable buffer substances for use in a pharmaceutical composition include acetic acid in a salt, citric acid in a salt, boric acid in a salt and phosphoric acid in a salt
  • Suitable preservatives for use in a pharmaceutical composition include benzalkonium chloride, chlorobutanol, paraben and thimerosal.
  • An injectible formulation may comprise a pharmaceutically acceptable excipient such as Ringer Lactate.
  • carrier refers to an organic or inorganic component, of a natural or synthetic nature, in which the active component is combined in order to facilitate, enhance or enable application.
  • carrier also includes one or more compatible solid or liquid fillers, diluents or encapsulating substances, which are suitable for administration to a patient.
  • Possible carrier substances for parenteral administration are e.g. sterile water, Ringer, Ringer lactate, sterile sodium chloride solution, polyalkylene glycols, hydrogenated naphthalenes and, in particular, biocompatible lactide polymers, lacti.de/glycolide copolymers or polyoxyethylene/polyoxy- propylene copolymers.
  • excipient when used herein is intended to indicate all substances which may be present in a pharmaceutical composition and which are not active ingredients such as, e.g., carriers, binders, lubricants, thickeners, surface active agents, preservatives, emulsifiers, buffers, flavoring agents, or colorants.
  • agents and compositions described herein may be administered via any conventional route, such as by parenteral administration including by injection or infusion.
  • Adrninistration is preferably parenterally, e.g. intravenously, intraarterially, subcutaneously, intradermally or intramuscularly.
  • compositions suitable for parenteral administration usually comprise a sterile aqueous or nonaqueous preparation of the active compound, which is preferably isotonic to the blood of the recipient.
  • suitable carriers and solvents are Ringer solution and isotonic sodium chloride solution.
  • sterile, fixed oils are used as solution or suspension medium.
  • an "effective amount” refers to the amount which achieves a desired reaction or a desired effect alone or together with further doses.
  • the desired reaction preferably relates to inhibition of the course of the disease. This comprises slowing down the progress of the disease and, in particular, interrupting or reversing the progress of the disease.
  • the desired reaction in a treatment of a disease or of a condition may also be delay of the onset or a prevention of the onset of said disease or said condition.
  • an effective amount of an agent or composition described herein will depend on the condition to be treated, the severeness of the disease, the individual parameters of the patient, including age, physiological condition, size and weight, the duration of treatment, the type of an accompanying therapy (if present), the specific route of administration and similar factors. Accordingly, the doses administered of the agents described herein may depend on various of such parameters. In the case that a reaction in a patient is insufficient with an initial dose, higher doses (or effectively higher doses achieved by a different, more localized route of administration) may be used.
  • agents and compositions provided herein may be used alone or in combination with conventional therapeutic regimens such as surgery, irradiation, chemotherapy and/or bone marrow transplantation (autologous, syngeneic, allogeneic or unrelated).
  • a cancer treatment may be effectively combined with various other drugs.
  • those are e.g. combinations with conventional tumor therapies, multi-epitope strategies, additional immunotherapy, and treatment approaches targeting angiogenesis or apoptosis (for review see e.g. Andersen et al. 2008: Cancer treatment: the combination of vaccination with other therapies.
  • Sequential administration of different agents may inhibit cancer cell growth at different check points, while other agents may e.g. inhibit neo-angiogenesis, survival of malignant cells or metastases, potentially converting cancer into a chronic disease.
  • the agents and compositions described herein can be administered to patients, e.g., in vivo, to treat or prevent a variety of disorders such as those described herein.
  • Preferred patients include human patients having disorders that can be corrected or ameliorated by administering the agents and compositions described herein. This includes disorders involving cells characterized by an altered expression pattern of CLDN18.2.
  • the agents and compositions described herein can be used to treat a patient with a cancer disease, e.g., a cancer disease such as described herein characterized by the presence of cancer cells expressing CLDN18.2.
  • a cancer disease e.g., a cancer disease such as described herein characterized by the presence of cancer cells expressing CLDN18.2.
  • compositions and methods of treatment described according to the invention may also be used for immunization or vaccination to prevent a disease described herein.
  • present invention is further illustrated by the following examples which are not construed as limiting the scope of the invention.
  • Endocytosis of CLDN18.2 bound IMAB362 was determined using a cytotoxicity based endocytosis assay that relies on the co-internalization of the target bound antibody and a saporin-conjugated anti-human or anti-mouse IgG Fab fragment (Fab-ZAP human, Advanced Targeting Systems, ⁇ -51, Lot: #93-23; Fab-ZAP mouse, Advanced Targeting Systems, ⁇ - 48, Lot: #93-21).
  • Saporin is a ribosome-inactivating protein, which upon internalization inhibits protein biosynthesis and therefore results in cell death.
  • Fab-ZAP antibody was applied in at least 6-fold molarity compared to the target antibody.
  • Stably transfected HEK293-CLDN18.2 cells were harvested with 0.05% Trypsin/EDTA (Gibco, 25300-054) and 2.5 x 10 3 cells/well were seeded in 50 ⁇ l growth medium in a 96-well cell culture plate. After 24 h, 25 ⁇ l of Fab-ZAP and 25 ⁇ l of anti-CLDN18.2 mAB or isotype control antibody diluted in cell culture medium were added to the cells (Table 1). Cells were cultured for additional 72 h.
  • Table 1 Antf-CLDN18.2 mAB and Fab-ZAP concentrations for endocytosis assay. Molecular weight: ⁇ 150 kDa for IMAB362 and 110 kDa for FabZAP.
  • the antigenic epitope responsible for CLDN18.2 specificity was analyzed by flow cytometry (see 5) on HEK293T cells transiently overexpressing CLDN18.2 mutants. A total of eight CLDN18.2 mutants with single amino acid substitutions within the first extracellular domain were generated by PCR. Therefore, amino acids of CLDN18.2 were substituted with amino acids of the homologous protein CLDN18.1 at corresponding positions.
  • HEK293T cells were co-transfected with plasmids coding for a specific CLDN18.2 mutant and EGFP as reporter gene. Purified antibodies were tested at a concentration of 5 ⁇ g/ml, whereas antibodies derived from hybridoma supernatants were diluted up to 1:4 before testing.
  • MFI mean fluorescence intensity
  • DM4 was coupled to IMAB362 via SPDB (N-succiniimdyl-3-(2-pyridy
  • SPDB N-succiniimdyl-3-(2-pyridy
  • the SPDB reagent is an amino and sulfhydryl reactive heterobifunctional protein crosslinker which reacts via an N -hydroxysuccinimide (NHS) ester with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and via a pyridinyldisulfide group with the sulhydryl group of DM4 to yield a reversible disulfide bond (Figure 1).
  • NHS N -hydroxysuccinimide
  • IMAB362 was diafiltered into PBS buffer (pH 7.2) using an ultra centrifugal filter and coupled to SPDB at a molar ratio of 1:6 (IMAB362:SPDB) for 1 h at RT.
  • the modified antibody was dialyzed against 35 mM citrate buffer (pH 5.5) and the linker to antibody ratio was determined.
  • DM4 was conjugated to IMAB362-SPDB at a molar ratio of 1:6 (IMAB362-SPDB:DM4) for 19 h at 2-8°C.
  • the conjugated antibody was adjusted to the storage buffer (20 mM His, 85 mg/ml sucrose, pH 5.8) and stored at -80 °C.
  • Drug antibody ratio was analyzed by UV spectrometry, the monomer content by SEC-HPLC and free drug content by RP-HPLC.
  • vcMMAE was coupled to thiolated IMAB362. Therefore, IMAB362 was initially thiolated with the heterobifunctional linker 2- ⁇ (2-iminothiolane) which reacts with free amines of lysine residues. Then, vcMMAE, containing the cathepsin cleavable peptide linker Val-Cit (vc), was conjugated via valine to the sulfhydryl group of the thiolated antibody ( Figure 1). In brief, IMAB362 was diafiltered into PBS buffer (pH 7.2) using an ultra centrifugal filter and incubated with 2- ⁇ at a molar ratio of 1:20 (IMAB362:2-IT) for 2 h at RT.
  • 2- ⁇ 2-iminothiolane
  • the modified antibody was dialyzed into 35 mM citrate buffer (pH 5.5) and the linker to antibody ratio was determined. Thereafter, vcMMAE was conjugated to thiolated IMAB362 at a molar ratio of 1:6 (IMAB362-SH:vcMMAE) by incubation for 20 h at 2-8°C. Conjugated antibodies were dialyzed into storage buffer (20 mM His, 85 mg/mL sucrose, pH 5.8) and stored at -80°C. Drug antibody ratio was analyzed by UV spectrometry, the monomer content by SEC-HPLC and free drug content by RP-HPLC.
  • Cell lines were cultivated in accordance with the suppliers' instructions and Ganymed's cell line data sheets in cell-type specific medium at 37°C in humidified incubators with 5% or 7.5% CO2 (Table 2).
  • Cell culture media and supplements were obtained from Invitrogen, Gibco and Sigma.
  • the relative binding affinities and specificities of anti-CLDN18.2 naked antibodies and antibody drug conjugates were determined by flow cytometry using CLDN18.2 positive and negative cell lines.
  • Cells from an exponentially growing culture were harvested with 0.05% Trypsin/EDTA (Gibco, 2S300-0S4), and counted using a Neubauer counting chamber. Cells were centrifuged 5 min at 1,500 rpm (468 x g), the supernatant was discarded and cells were resuspended in FACS buffer (PBS containing 2% FCS (Gibco, 10270-106) for analysis with toxin-conjugated antibodies, PBS containing 2% FCS and 2 raM EDTA for screening of CLDN18.2 reactive naked antibodies) at 2 x 10 6 cells/ml.
  • FACS buffer PBS containing 2% FCS (Gibco, 10270-106) for analysis with toxin-conjugated antibodies, PBS containing 2% FCS and 2 raM EDTA for screening of CLDN18.2 reactive naked antibodies
  • FACS buffer containing APC-conjugated anti-human IgG (Jackson Immuno Research, 109-136-170) or APC-conjugated goat-anti-mouse IgG (Jackson Immuno Research, 115-136-146) or Protein L-FITC (1 ⁇ g/ml, analysis of chim mAB294) and incubated for 30 min at 4°C (Table 3). After incubation, 100 ⁇ l FACS buffer were added to each sample, the cells were centrifuged for 1 min at 1500 rpm and the supernatant was discarded. The washing step with FACS buffer was repeated twice. Finally, the cells were resuspended in 100 ⁇ l FACS buffer and binding was determined using a BD FACS Array Bioanalyzer.
  • toxin-conjugated and naked antibodies were applied at equal concentrations. Differences between the molecular weight of the antibodies were neglected.
  • JMAB362-DM4 and IMAB362-vcMMAE were determined using a colorimetric assay that detects cellular metabolic activities.
  • the assay is based on the ability of metabolically active cells to reduce yellow XTT (2,3-Bis-(2-methoxy-4-nitro-5- sulfophenyl)-2H-tetrazolium- 5 -caiboxanilide) to an orange colored formazan compound which can be detected by spectrophotometry.
  • the intensity of the dye is proportional to the number of living cells.
  • Table 4 Overview of cell lines used in viability assays.
  • IMAB362-DM4, IMAB362-vcMMAE or unconjugated IMAB362 as negative control were added and cells were cultured for another 72 h.
  • Cell viability was analyzed as described in 6. Lysis of target negative cells was determined by measuring the bioluminescence of luciferase expressing PA-l(Luc) cells. Therefore, 50 ⁇ l luciferin mix (1.92 mg/ml D-luciferin (Sigma, 50227) and 160 mM HEPES in ddH 2 0) were added per well. The plate was incubated in the dark at RT for 90 min and bioluminescence was measured using a luminometer (Infinite M200, TECAN). Results are expressed as integrated digital relative light units (RLU). Reduction of viability was calculated as described in 6.
  • Xenograft tumors were inoculated by subcutaneous injection of 8.5 x 10 6 BxPC-3 ⁇ CLDNl 8.2 human pancreatic tumor cells in 200 ⁇ l PBS into the flanks of female Hsd:Athymic Nude- Foxnlnu mice.
  • tumor-bearing mice received different doses of IMAB362-DM4 or IMAB362-vcMMAE.
  • the maximal applicable dose was limited by the antibody concentration and the injection volume recommended from GV-SOLAS for intravenous injection in mice ( ⁇ 200 ⁇ l). Both antibodies were applied in the maximal concentration as single and repeated dose (i.e.
  • mice were perfused with PBS followed by a perfusion with 4% formalin under general anesthesia.
  • Selected organs and tissues stomach, esophagus, brain, heart, kidney, liver, lung, pancreas, spleen, duodenum, ileum, colon, uterus and ovaries
  • stomach esophagus, brain, heart, kidney, liver, lung, pancreas, spleen, duodenum, ileum, colon, uterus and ovaries
  • FFPE formalin fixated paraffin embedded
  • adhesive slides SuperFrost Ultra Plus, Thermo Fisher Scientific
  • the FFPE tissue sections were deparaffinized using xylene and rehydrated through a graded ethanol series (2x 100%, 2x 96%, 2x 70% ethanol for 3 min each).
  • Nuclei were stained with for 5 min at RT with Mayer's hematoxyline, followed by blueing in tap H 2 0.
  • the cytoplasm was counterstained with aqueous 0.5% eosin for 2 min at RT.
  • dehydration through a graded ethanol series and xylene sections were mounted using non-aqueous mounting media X-TRA Kit
  • IMAB362-DM4 or IMAB362-vcMMAE were treated with a single intravenous injection of IMAB362-DM4 or IMAB362-vcMMAE at doses not exceeding the MTD.
  • the naked antibody control was administered semi-weekly by alternating IV/i.p. injections of ⁇ 8 mg/kg IMAB362.
  • tumors were grown to a volume between SO and 200 mm 3 and mice were redistributed into control and antibody groups with homogenous tumor mean volumes before treatment Body weight, animal health, behavior and tumor size were monitored semi-weekly with a caliper. Tumor volumes were calculated by the following formula: [length x width x (width/2)]. An abort criterion was a tumor size with >16 mm in length or width or with a calculated volume of >1400 mm 3 . Further abort criterions were ulcerating tumors or when the animal lost more than 10% body weight In case of complete tumor growth inhibition, mice were observed for 120 days after treatment. Persisting tumors were prepared and fixated in 4% formalin for subsequent IHC studies.
  • EXAMPLE 2 ENDOCYTOSIS SCREENING OF ANTI-CLDN18.2 SPECIFIC ANTIBODIES
  • endocytosis is an essential feature for the development of antibody-drug conjugates (ADC).
  • ADC antibody-drug conjugates
  • One important property of the ADCs is the endocytosis of the target-ADC complex. Therefore, the endocytosis rate of the naked antibody is one of the essential key factors for the development of toxin-conjugated antibodies.
  • Binding properties i.e. relative affinity to CLDN18.2, cross-reactivity to CLDN18.1 and antigenic epitope mediating CLDN18.2 specificity, were determined for different murine and chimeric anti-CLDN18.2 antibodies by flow cytometric analysis (Table 5 and Table 6).
  • Antibodies demonstrating high binding to CLDN18.2 were selected for further endocytosis screening.
  • chim mAB308 and chim mAB359 did not reduce cell viability (Figure 2).
  • Piramal Healthcare performed the toxin conjugation including final buffer exchange. Stability studies were performed to show that the ADCs remain within specification during a certain period if stored under defined storage conditions.
  • 1MAB362 was conjugated to MMAE via the cleavable valine-citrulline linker (vc linker) or to DM4 via the cleavable N-succinimidyl- 4- ⁇ 2-pyridyldithio)butyrate linker (SPDB linker).
  • the IMAB362 toxin conjugates were stored in storage buffer (20 mM histidine and 85 mg/ml sucrose, pH S.8) at 2-8 °C.
  • IMAB362-DM4 and IMAB362-vcMMAE both demonstrate a high monomer content of >95% and only low amounts of free drug ( ⁇ 1%).
  • the 28-day stability testing of toxin- conjugated IMAB362 antibodies at a storage temperature of 2-8 °C show only a small decrease of the monomer content and a low increase in free drug for both ADCs. Both antibodies were efficiently conjugated and exhibit a drug to antibody ratio of 3.2 for IMAB362-DM4 and 4.5 for IMAB362-vcMMAE (Table 7).
  • IMAB362 binds to the first extracellular loop of claudin 18 splice variant 2 (CLDN18.2).
  • DM4- and MMAE -conjugated IMAB362 showed slightly reduced relative binding affinities on cells endogenously and ectopically expressing CLDN18.2 ( Figure 4, Table 8). Both toxin-conjugated antibodies had very similar ECSO values, but slightly different maximum binding values in which IMAB362-DM4 exhibited higher maxinmm binding (Table 8).
  • EXAMPLE 5 EFFICACY AND SPECIFICITY OF IMAB362-ADCS IN VITRO 1. Influence on cell viability
  • IMAB362-DM4 and IMAB362-vcMMAE were tested with several human gastric and pancreatic cancer cell lines endogenously and ectopically expressing CLDN18.2 using a colorimetric XTT-based assay for the spectrophotometric quantification of metabolically active cells.
  • the anti-tumoral activities were tested at different antibody concentrations in a range of 3 to 16875 ng/ml ( Figure 7, Table 9).
  • IMAB362-DM4 and IMAB362-vcMMAE efficiently inhibited the viability of the gastric cancer cell line NUGC-4, NCI-N87-CLDN18.2 and the pancreatic cell line BxPC-3 ⁇ CLDN18.2 in vitro ( Figure 7). Both IMAB362-toxin conjugates inhibited cell viabilities of endogenously
  • CLDN18.2 expressing NUGC-4 cells ECSO values: 155 - 631 ng/ml, maximum reduction of viability. > 85%
  • ectopically CLDN18.2 expressing BxPC-3 ⁇ CLDN18.2 cells EC50 values:
  • Table 9 Overview of caH viability assays performed with IMAB362-toxin conjugates on CLDN1&2 positive cell lines.
  • IMAB362-vcMMAE reduces cell viability on CLDN18.2 positive but not on CLDN18.2 negative cells. The effect is strictly CLDN18.2 specific because no inhibition of cell proliferation could be observed on cells expressing the homologous protein 18.1 ( Figure 9).
  • IMAB362-vcMMAE and IMAB362-DM4 showed similar efficacies in vitro and both ADCs highly efficiently inhibited cell viability of several human gastric and pancreatic cancer cell lines. The effect strictly depends on target expression.
  • the bystander activity of IMAB362-DM4 and IMAB362-vcMMAE in vitro was determined using mixed tumor cell cultures consisting of CLDN18.2 positive and negative cell lines.
  • Target- negative PA- 1 (Luc) cells stably expressing firefly luciferase were used as reporter cells to measure cell lysis.
  • Luciferase activity of co-cultures of luciferase expressing PA- 1 (Luc) and luciferase negative NUGC-4 cells showed that treatment with IMAB362-DM4 or IMAB362-vcMMAE eliminated target negative PA- 1 (Luc) cells very effectively in the presence of target positive NUGC-4 cells.
  • PA- 1 (Luc) cells were unaffected in the absence of CLDN18.2 expressing cells ( Figure 10).
  • IMAB362-DM4 and IMAB362-vcMMAE ADCs were able to induce a bystander effect on neighboring CLDN18.2-negative tumor cells. Both toxins were efficiently released from EMAB362 within CLDN18.2 positive cancer cells and, due to their membrane permeability, are able to exert cytotoxic activity on bystander cells.
  • the maximum tolerated dose (MTD) of IMAB362-DM4 and IMAB362-vcMMAE was determined in nude mice with advanced human BxPC-3 ⁇ CLDN18.2 pancreatic xenograft tumors.
  • the MTD refers to the highest dose in a treatment that will produce the desired effect without unacceptable toxicity.
  • mice BxPC-3 ⁇ CLDN8.2 cells ectopically expressing human CLDN18.2 were injected subcutaneously into the flank of female Hsd:Athymic Nude-Foxnlnu mice. After the tumors reached an average size of 75 ⁇ 13 mm 3 (mean ⁇ SD) on day 13, mice were grouped into control and antibody groups. Mice received a single dose of 7.5 or IS mg/kg EMAB362-DM4 by IV bolus injection on day 14 or repeated doses of IS mg/kg IMAB362-DM4 by IV bolus injections on day 14 and day 21, respectively. Mice of the control group got vehicle on day 14. On day 49 after engraftment, animals were sacrificed. To test for toxicity, blood samples were collected and organs were prepared and stored for further histopathological studies.
  • IMAB362-DM4 inhibited tumor growth in mice with advanced human BxPC-3 ⁇ CLDN8.2 xenograft tumors.
  • IMAB362-DM4 single or repeated treatments resulted in nearly complete tumor regressions in all treated mice during the observation period of the study (49 days), independently of the dose.
  • a single dose of 7.S mg/kg IMAB362-DM4 might be sufficient for complete tumor remission (Figure 11).
  • MTD of IMAB362-VCMMAE The MTD of IMAB362-vcMMA£ was tested using the same mouse model as for IMAB362- DM4 (1.1). Mice were grouped after the tumors reached an average size of 111 ⁇ 27 mm 3 (mean ⁇ SD) on day 13 and treated with a single IV bolus injection of 8 or 16 mg/kg IMAB362- vcMMAE (equivalent to 24 and 48 mg/m 2 in human) on day 14 or with repeated doses IV bolus injections of 16 mg/kg EMAB362-vcMMAE on days 14 and 21. Mice of the control group received vehicle control on day 14. Animals were sacrificed on day 37. Clinical biochemistry was determined and organs were collected and stored for further histopathological studies.
  • HMAB362-VCMMAE treatment induced tumor regression and further inhibited tumor growth in mice with advanced human BxPC-3 ⁇ CLDN8.2 xenograft tumors.
  • IMAB362-vcMMAE single or repeated treatments resulted in nearly complete tumor regressions in all treated mice, independently of the dose.
  • a single dose of 8 mg/kg IMAB362-vcMMAE might be sufficient for complete tumor remission (Figure IS).
  • Histological analysis paraffin sections from brain, heart, kidney, liver lung, pancreas, spleen and stomach were hematoxylin-eosin stained and microscopically examined for IMAB362- vcMMAE mediated morphological changes.
  • IMAB362-DM4 and IMAB362-vcMMAE were further analyzed in vivo in athymic Nude-Foxnl nu mice subcutaneously engrafted with endogenously or ectopically CLDN18.2 expressing human carcinoma cells.
  • the optimal therapeutic dose of IMAB362-DM4 and IMAB362-vcMMAE in animal tumor models was determined in dose range finding studies ( Figure 18 and Figure 20, respectively). Further efficacy studies on human xenograft tumors were performed with the optimal dose of IMAB362-DM4 and IMAB362-vcMMAE ( Figure 19 and Figure 21, respectively).
  • EMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibit tumor growth and improve survival of tumor bearing mice in different early xenograft models (therapy initiation 3 days after tumor implantation) as well as in treatments of advanced solid tumors (therapy initiation at ⁇ 100 mm 3 tumor size).
  • IMAB362-DM4 and IMAB362- vcMMAE were analyzed in mice with advanced CLDN18.2 positive NCI-N87-CLDN18.2 xenograft tumors. 13 days after engraftment, animals were treated with 1S.2, 7.6 or 3.8 mg/kg IMAB362-DM4 or 16, 8 or 4 mg/kg IMAB362-vcMMAE or vehicle control applied as single IV bolus injections. Animals from the control group received 8 mg/kg unconjugated EMAB362 (twice a week, IV/i.p.).
  • IMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibited tumor growth, mediated tumor regression and prolonged survival of tumor bearing mice in a dose dependent manner while IMAB362 naked antibody in this advanced treatment model did not exhibit statistically significant anti-tumoral effects (Figure 18).
  • Both IMAB362 toxin-conjugated antibodies prolonged survival of tumor bearing mice (median survival: 73 days in the vehicle group compared to 143 days in the IMAB362-vcMMAE 16 mg/kg and 136 days in the IMAB362-DM4 15.2 mg/kg group) ( Figure 18).
  • IMAB362-DM4 and IMAB362-vcMMAE in vivo were analyzed in a dose range finding study in mice with advanced human BxPC-3 ⁇ CLDN18.2 pancreatic xenograft tumors. Animals were treated on day 14 with 15.2, 7.6 or 3.8 mg/kg IMAB362-DM4, 16, 8 or 4 mg/kg IMAB362-vcMMAE, vehicle administered as single bolus IV injections or with repeated doses of 8 mg/kg IMAB362 (twice a week, IV/i.p.).
  • IMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibited tumor growth, mediated tumor regression and prolonged survival of tumor bearing mice in a dose dependent manner.
  • unconjugated IMAB362 did not exhibit statistically significant anti-tumoral activities in this advanced tumor model ( Figure 20).
  • Both IMAB362 toxin-conjugated antibodies highly significantly prolonged survival of tumor bearing mice (median survival: 48 days in the vehicle group compared to 98.5 days in the ⁇ 362- vcMMAE 16 mg/kg and 81 days in the IMAB362-DM4 15.2 mg/kg group) ( Figure 20).
  • IMAB362-DM4 and IMAB362-vcMMAE in vivo were tested in mice subcutaneously engrafted with DAN-G 1C5F2 pancreatic carcinoma cells endogenously expressing CLDN18.2.
  • DAN-G 1C5F2 cells have only extremely low amounts of CLDN18.2 on the cell surface; although considerable amounts of protein or RNA can be detected by immunoblot or qRT-PCR.
  • IHC analyses of DAN-G 1CSF2 xenograft tumors demonstrated that only a subpopulation of tumor cells showed moderate to strong membrane associated CLDN18.2 staining.
  • DAN-G 1C5F2 xenograft tumors might be suitable for treatment with antibody drug conjugates that exhibit bystander killing.
  • Animals were treated on day 3 post engraftment by single dose IV injection of 1S.2 mg/kg IMAB362-DM4, 16 mg/kg IMAB362- vcMMAE or vehicle control.
  • tumors with low and/or heterogeneous expression of CLDN18.2 can be efficiently treated with IMAB362-DM4 or IMAB362- vcMMAE and a large part of tumor-bearing animals were cured.
  • the anti-tumoral activities of both ADCs can be explained on the basis of the bystander effect: The release of cell membrane- permeable forms of DM4 and MMAE after cellular processing facilitates the killing of neighboring tumor cells even if they are target negative. Therefore, both ADCs are highly effective in eradicating tumors containing only fractions of CLDN18.2 positive cells.
  • the cytotoxicity of toxin-conjugated IMAB362 was evaluated by apoptosis assays measuring caspase 3/7 activity and the extemalization of phosphatidylserine.
  • Caspase activation represents one of the earliest measurable markers of apoptosis which is important for the initiation of programed cell death (Henkart 1996).
  • Caspase 3/7 activity was determined in a luciferase-based assay by the cleavage of a caspase 3/7 specific pro-luminogenic substrate. Another early event in apoptosis was monitored by flow cytometry using fluorescence-conjugated annexin V (Vermes et al. 199S).
  • Annexin V specifically binds to phosphatidylserine which is translocated from the inner leaflet of the plasma membrane to the outer leaflet immediately after the induction of apoptosis.
  • PI propidium iodide
  • EXAMPLE 8 TREATMENT OF ADVANCED HUMAN NUGC-4 10CF7-5 SORT3A GASTRIC XENOGRAFT TUMORS
  • Animals with advanced tumors (tumor size of -200 mm3) were treated on day 10 post engraftment by IV injection of 15.2 mg/kg IMAB362-DM4, 16 mg/kg IMAB362- vcMMAE or vehicle control and after recurrence of tumors in the IMAB362 conjugate treated groups by a second injection of the respective drug (day 38).
  • IMAB362-DM4 and IMAB362-vcMMAE significantly inhibited tumor growth and mediated tumor regression in all treated animals (day 52) while all mice of the control group developed tumors (IMAB362-DM4: p ⁇ 0.05; IMAB362-vcMMAE: p ⁇ 0.001) (Figure 24). 28 days after therapy (day 38 post engraftment) recurrent tumor growth (tumor size > ⁇ 100mm3) was observed in 50% of the animals of the IMAB362-DM4 treated group. The second injection of the respective IMAB362-DM4 and IMAB362-vcMMAE again resulted in partial or complete remission of the tumors.
  • Recurrent tumor growth finally was observed in 7 out of 8 animals in the IMAB362-DM4 group and 4 out of 8 animals in the IMAB362-vcMMAE group.
  • 4 out 8 animals in the IMAB362- vcMMAE group and one animal in the IMAB362-DM4 and IMAB362 group were alive while all animals of the vehicle group died latest on day 52 post engraftment (median survival 32.S days for vehicle, 90 days for IMAB362-DM4 (p ⁇ 0.0003 vs vehicle) and undefined for IMAB362-VCMMAE (p ⁇ 0.0003 vs vehicle)) (Figure 24).

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Abstract

The present invention provides anti-CLDNl 8,2 antibody-drug conjugates which are effective for treating and/or preventing cancer diseases associated with cells expressing CLDN18.2, including gastric cancer, esophageal cancer, pancreatic cancer, lung cancer, ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancer of the gallbladder and metastases thereof.

Description

DRUG CONJUGATES COMPRISING ANTIBODIES AGAINST CLAUDIN 18.2
Monoclonal antibodies (mABs) have revolutionized the treatment of cancer over the past two decades (Sliwkowski, M. X. et al. (2013) Science 341 (6151), 1192-1198). A critical feature of mABs is their high specificity and their ability to target tumor cells, marking them for immune-effector mediated cell killing (complement-dependent cytotoxicity (CDC), antibody- dependent cellular cytotoxicity (ADCC)) and/or leading to reduced proliferation and apoptosis (Kubota, T. et al. (2009) Cancer Sci. 100 (9), 1566-1572). Conjugation to cytotoxic drugs can expand the utility of mABs and improve their potency and effectiveness (Goldmacher, V. S. et al. (2011) Ther. Deliv. 2 (3), 397-416; Sievers, E. L. (2013) Annu. Rev. Med. 64, 15-29).
Historically, the use of cytotoxic drugs for the treatment of cancer has centered on chemotherapies that target dividing cancer cells. These compounds do not only target cancer cells but also other dividing healthy cells in the body, and patients receiving treatment experience severe side effects that limit the dose. The therapeutic index (maximum tolerated dose/minimum efficacious dose) for these drugs is low, resulting in a narrow therapeutic window (Ismael, G. F. V. et al. (2008) Cancer Treat Rev. 34 (1), 81-91). To circumvent this obstacle in drug development and improve the therapeutic index, antibodies can be used to deliver the cytotoxic drug specifically to the tumor. By combining the unique targeting capabilities of an antibody with the cancer-killing ability of a cytotoxic drug, antibody-drug conjugates (ADCs) exhibit lower side effects and provide a wider therapeutic window compared to traditional chemotherapeutic agents (Gerber, H.-P. et al. (2013) Nat Prod. Rep. 30 (5), 625-639).
ADCs are designed to kill cancer cells in a target-dependent manner. The first step in this process is binding of the antibody to its antigen. Upon ADC binding, the entire antigen-ADC complex is internalized and the cytotoxic payload is released into the tumor cell resulting in cell death. Factors that influence the therapeutic index for ADCs include the antibody, the tumor target antigen, the cytotoxic drug and the linker (Panowksi, S. et al. (2014) MAbs 6 (1), 34-45).
As a basic prerequisite for the development of ADCs, the tumor target antigen has to be localized on the cell surface and accessible to the circulating antibody. Furthermore, the tumor selectivity and the expression level of the target antigen are critical parameters for the design of safe and efficacious ADCs. Currently, a variety of tumor-associated cell surface antigens are being evaluated as ADC targets for cancer therapy (Trail, P. A. (2013) Antibodies 2 (1), 113-129; Teicher, B. A. (2009) Curr. Cancer Drug Targets 9 (8), 982-1004).
The efficiency of an ADC also depends on the cytotoxic drug. As the amount of an antibody that localizes to a tumor is very small compared to the administered dose, toxic compounds with sub-nanomolar potency are required. Auristatins and maytansinoids are two classes of highly potent cytotoxins currently used in ADC development (Trail, P. A. (2013) Antibodies 2 (1), 113-129). Both are antimitotic agents blocking the polymerization of tubulin causing cell death by a G2/M phase cell cycle arrest (Lopus, M. et al. (2010) Mol. Cancer Ther. 9 (10), 2689-2699; Francisco, J. A et al. (2003) Blood 102 (4), 1458-1465). In addition to the specificity of the mAB and potency of the drug, the linker is an important element in ADC development. The linker should be stable to exploit the pharmacokinetic half-life of the mAB and should not release the cytotoxic drug until antigen-mediated internalization. Linkers can be classified by their mechanism of drug release: Cleavable linkers release the drug by hydrolysis or enzymatic cleavage following antigen-specific internalization whereas non- cleavable linkers, release the drug via degradation of the mAB in lysosomes following internalization (Dosio, F. et al. (2011) Toxins (Basel) 3 (7), S. 848-883).
Depending on the linker design, membrane permeable (lipophilic) toxins mat are released inside target positive cells can pass the cell membrane and kill other cells that are in close proximity, including neighboring cancer cells that lack antigen expression (bystander effect) (Kovtun, Y. V. et al. (2006) Cancer Res. 66 (6), 3214-3221). The ability of these cytotoxic drugs to mediate local bystander killing is an important selection criteria for those ADCs directed against antigens that are heterogeneously expressed in tumors.
The tight junction molecule claudin 18 isotype 2 (CLDN18.2) is a cancer-associated splice variant of Claudin 18. CLDN18.2 is a 27.8 kDa transmembrane protein comprising four membrane spanning domains with two small extracellular loops (loopl embraced by hydrophobic region 1 and hydrophobic region 2; loop2 embraced by hydrophobic regions 3 and 4). CLDN18.2 is a highly selective gastric lineage antigen, exclusively expressed on short-lived differentiated gastric epithelial cells and not detectable in any other normal human tissue. The antigen is ectopically expressed at significant levels in a diversity of human cancers including gastroesophageal and pancreatic cancer (Sahin, U., et al., Clin Cancer Res, 2008. 14(23): p. 7624-34). The CLDN18.2 protein is also frequently detected in lymph node metastases of gastric cancer and in distant metastases. CLDN18.2 seems to be involved in proliferation of CLDN18.2 positive tumor cells, since down regulation of the target by siRNA technology results in inhibition of proliferation of gastric cancer cells. IMAB362 is a chimeric monoclonal antibody of IgGl subtype directed against CLDN18.2. HMAB362 recognizes the first extracellular domain of CLDN18.2 with high affinity and specificity and does not bind to any other claudin family member including the closely related splice variant 1 of Claudin 18 (CLDN18.1). In human xenografts expressing CLDN18.2 survival benefit and tumor regressions have been observed in mice after administration of IMAB362. When administered intravenously in relevant animal species, no toxicity in gastric tissue is observed as the target epitope is not accessible. However, the tumor target becomes accessible for IMAB362 during malignant transformation. IMAB362 bundles four independent highly potent mechanisms of action: (i) antibody-dependent cellular cytotoxicity (ADCC), (ii) complement-dependent cytotoxicity (CDC), (iii) induction of apoptosis induced by cross linking of the target at the tumor surface and (iv) direct inhibition of proliferation. A previous phase I trial has evaluated IMAB362 as monotherapy in a single dose in patients with late-stage gastroesophageal cancer. This study shows that a single administration of this antibody is safe and well tolerated in a dosage of up to 1000 mg/m2, as no relevant differences in AE profile and other safety parameters between the dose groups could be seen (AE = adverse event). Best results with regard to antitumoral activity were obtained for the 300 mg/m2 and 600 mg/m2 groups. A phase Ila clinical trial was conducted to determine safety, tolerability and antitumoral activity of repetitive doses of IMAB362 in patients with metastatic, refractory or recurrent disease of advanced adenocarcinoma of the stomach or the lower esophagus proven by histology.
As described above, CLDN18.2 has a restricted expression pattern in normal cells and, thus, appears to be an ideal target for antibody-directed therapy of cancer expressing CLDN18.2. Accordingly, there is a need for a therapy directed against CLDN18.2-expressing cancer cells that is capable of exerting a clinically useful cytotoxic or cytostatic effect on CLDN18.2- expressing cells, particularly without exerting undesirable effects on non-CLDNl 8.2- expressing cells. Preferably, the therapy should not be associated with disadvantages and undesirable side effects commonly associated with approaches that have been used for increasing the therapeutic efficacy of antibodies such as radiolabeling and combination with chemotherapy. For example, isotope therapy is associated with myelosuppression, and combination therapy with antibodies and chemotherapeutics is associated with immunosuppression. Further, isotopically labeled substances are difficult to produce, and patients often experience relapse after initial treatment with isotopically labeled substances. The present invention demonstrates the existence of anti-CLDN18.2 monoclonal antibodies that can be highly efficiently internalized upon CLDN18.2 binding on CLND18.2-expressing cells and therefore are suitable for ADC development. Furthermore, the successful conjugation of such antibodies to the drugs DM4 and MMAE using cleavable SPDB or Val- Cit (vc) linkers, respectively, is disclosed. In vitro, the antibody conjugates reduce viability of gastric and pancreatic cancer cells expressing CLDN18.2. IMAB362-vcMMAE and EMAB362-DM4 do not bind to or influence viability of CLDN18.2 negative cells. Both, the DM4 and vcMMAE conjugates exert bystander killing effects on CLDN18.2 negative cancer cells co-cultured with CLDN18.2 positive cancer cells in vitro. Furthermore, in vivo, intravenous administration of the antibody conjugates in nude mice with CLDN18.2-positive gastric or pancreatic xenograft tumors results in dose-dependent tumor growth inhibition, survival benefit and even complete regression of early and advanced tumors. Significant therapeutic effects are observed at single dose intravenous application of ~4-8 mg/kg; optimal therapeutic effects are achieved at 15-16 mg/kg. The maximum tolerated single dose of both conjugates could not be determined as the highest possible tested doses of 1S.2 and 16 mg/kg did not result in liver toxicities or other toxic effects.
From the data presented herein it can be concluded that anti-CLDN18.2 antibody-drug conjugates such as those described herein are highly potent drugs for the treatment of CLDN18.2-positive human carcinomas such as gastric and pancreatic carcinomas.
SUMMARY OF THE INVENTION
The present invention generally provides a therapy for effectively treating and/or preventing cancer associated with cells expressing CLDN18.2 such as gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancer of the gallbladder and metastases thereof, in particular gastric cancer metastasis such as Krukenberg tumors, peritoneal metastasis and lymph node metastasis. Particularly preferred cancer diseases are adenocarcinomas of the stomach, the esophagus, the pancreatic duct, the bile ducts, the lung and the ovary. In one aspect, the present invention provides a method of treating or preventing a CLDN18.2- expressing cancer comprising administering an antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety to a cancer patient.
In one embodiment, the antibody-drug conjugate is internalized into cells following binding to CLDN18.2 expressed by the cells.
In one embodiment, the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2. In one embodiment, the antibody-drug conjugate specifically binds to CLDN18.2.
In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal, chimeric or humanized antibody, or a fragment of an antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody.
In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
In one embodiment, the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i). In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment. In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment. In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN 18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN 18.2-binding antibody for binding to CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN 18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN 18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: IS or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2. An antibody which competes with a second antibody for binding to a target preferably is antagonistic to said second antibody.
In one embodiment, the toxin drug moiety is cell membrane-permeable. In one embodiment, the toxin drug moiety is a cytotoxic or cytostatic agent. In one embodiment, the toxin drug moiety is a maytansinoid or an auristatin. In one embodiment, the maytansinoid is selected from the group consisting of DM1 and DM4. In one embodiment, the auristatin is selected from the group consisting of monomethyl auristatin E (MMAE) and monomethyl auristatin F (MMAF).
In one embodiment, the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker. In one embodiment, the linker is a cleavable linker. In one embodiment, the linker is cleavable under intracellular conditions. In one embodiment, the linker is hydrolyzable at a pH of less than 5.5. In one embodiment, the linker is cleavable by an intracellular protease. In one embodiment, the linker is a cathepsin- cleavable linker. In one embodiment, the linker comprises a dipeptide. In one embodiment, the dipeptide is val-cit or phe-lys. In one embodiment, the antibody is attached to the linker through a cysteine thiol of the antibody. In one embodiment, the antibody is attached to the linker through amine groups, in particular amine groups of lysine residues of the antibody.
In one embodiment, the antibody-drug conjugate is administered in an amount effective for the treatment or prevention of the CLDN18.2-expressing cancer. In one embodiment, the antibody-drug conjugate is administered at a dose of between 3 to 30 mg/kg body weight, such as between 4 to 25, 5 to 20, 10 to 18, or IS to 16 mg/kg body weight. In one embodiment, the antibody-drug conjugate is administered at a dose of between 8 to ISO, 9 to 100 or 9 to 90 mg/m2 body surface of a human patient, such as between 12 to 75, IS to 60, 30 to 54, or 45 to 48 mg/m2 body surface of a human patient. In one embodiment, a single dose of the antibody-drug conjugate or two or more doses of the antibody-drug conjugate are administered. In one embodiment, the antibody-drug conjugate is administered by intravenous injection.
In one embodiment, the method of the invention further comprises administering surgery, chemotherapy and/or radiation therapy.
In one embodiment, expression of CLDN18.2 is at the cell surface of cancer cells. In one embodiment, the cancer is an adenocarcinoma, in particular an advanced adenocarcinoma. In one embodiment, the cancer is selected from the group consisting of gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), breast cancer, ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, cancer of the gallbladder and the metastasis thereof, a Krukenberg tumor, peritoneal metastasis and/or lymph node metastasis. In one embodiment, the cancer is selected from the group consisting of cancer of the stomach, cancer of the esophagus, in particular the lower esophagus, cancer of the eso-gastric junction and gastroesophageal cancer. In one embodiment, the patient is a HER2/neu negative patient or a patient with HER2/neu positive status but not eligible to trastuzumab therapy.
In one embodiment, CLDN18.2 has the amino acid sequence according to SEQ ID NO: 1.
In a further aspect, the present invention provides an antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety.
In one embodiment, the antibody-drug conjugate is internalized into cells following binding to CLDN18.2 expressed by the cells.
In one embodiment, the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2. In one embodiment, the antibody-drug conjugate specifically binds to CLDN18.2.
In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal, chimeric or humanized antibody, or a fragment of an antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells, hi one embodiment, the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
In one embodiment, the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i). In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment. In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment. In one embodiment, the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or 51 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2. In one embodiment, the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: IS or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN 18.2 -binding antibody for binding to CLDN18.2. An antibody which competes with a second antibody for binding to a target preferably is antagonistic to said second antibody.
In one embodiment, the toxin drug moiety is cell membrane-permeable. In one embodiment, the toxin drug moiety is a cytotoxic or cytostatic agent In one embodiment, the toxin drug moiety is a maytansinoid or an auristatin. In one embodiment, the maytansinoid is selected from the group consisting of DM1 and DM4. In one embodiment, the auristatin is selected from the group consisting of monomethyl auristatin E (MMAE) and monomethyl auristatin F (MMAF). In one embodiment, the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker. In one embodiment, the linker is a cleavable linker. In one embodiment, the linker is cleavable under intracellular conditions. In one embodiment, the linker is hydrolyzable at a pH of less than 5.5. In one embodiment, the linker is cleavable by an intracellular protease. In one embodiment, the linker is a cathepsin- cleavable linker. In one embodiment, the linker comprises a dipeptide. In one embodiment, the dipeptide is val-cit or phe-lys. In one embodiment, the antibody is attached to the linker through a cysteine thiol of the antibody. In one embodiment, the antibody is attached to the linker through amine groups, in particular amine groups of lysine residues of the antibody.
In one embodiment, CLDN18.2 has the amino acid sequence according to SEQ ID NO: 1.
In a further aspect, the present invention provides a pharmaceutical formulation comprising the antibody-drug conjugate of the invention, and a pharmaceutically acceptable diluent, carrier or excipient.
In a further aspect, the present invention provides a medical preparation comprising the antibody-drug conjugate of the invention. In one embodiment, the medical preparation is present in the form of a kit comprising a container including the antibody-drug conjugate. In one embodiment, the medical preparation further includes printed instructions for use of the preparation in a method of treating or preventing cancer, in particular a CLDN18.2-expressing cancer.
In a further aspect, the present invention provides the antibody-drug conjugate of the invention, the pharmaceutical composition of the invention or the medical preparation of the invention for use in therapy, in particular for use in a method of treating or preventing cancer, in particular a CLDN18.2-expressing cancer. In one embodiment, the method of treating or preventing cancer is a method of treating or preventing a CLDN18.2-expressing cancer of the invention.
Other features and advantages of the instant invention will be apparent from the following detailed description and claims. BRIEF DESCRIPTION OF THE DRAWINGS
Figure 1: Antibody drug conjugation-
Figure 2: Reduction of viability after co-incubation of HEK293-CLDN18.2 cells with chimeric anti-CLDN18.2 mAbs and Fab-ZAP (indirect evaluation of internalization).
HEK293-CLDN18.2 cells were incubated for 72 h with anti-CLDN18.2 specific antibodies and saporin conjugated anti-human IgG Fab fragment (Fab-ZAP human). Endocytosis of IMAB362, chim mAB294, chim mAB308 and chim mAB359 was determined indirectly by measuring cell viability. Data points (n=3 replicates) are depicted as mean ± SD.
Figure 3: Reduction of viability after co-incubation of HEK293-CLDN18.2 cells with murine anti-CLDN18.2 antibodies and Fab-ZAP (indirect evaluation of internalization).
HEK293-CLDN18.2 cells were incubated for 72 h with anti-CLDN18.2 reactive murine antibodies and saporin conjugated anti-mouse IgG Fab fragment (Fab-ZAP murine). Endocytosis of different anti-CLDN18.2 reactive murine antibodies was indirectly determined by measuring cell viability.
Figure 4: Relative binding affinities of IMAB362-DM4 and IMAB362-vcMMAE to CLDN18.2 positive cells.
Relative binding affinities of IMAB362-toxin conjugates in comparison to unconjugated IMAB362 were determined on (A) NUGC-4 10cF7-5 sort3a and (B) DAN-G 1C5F2 cells endogenously expressing CLDN18.2, (C) NCI-N87-CLDN18.2 and (D) BxPC-3~CLDN18.2 cells ectopically overexpressing CLDN18.2 by flow cytometry at antibody concentrations up to 20 μg/ml. Data points (n=2 replicates) are depicted as mean ± SD.
Figure 5: CLDN18.2-mediated binding of ΓΜΑΒ362-ΟΜ4 and IMAB362-vcMMAE.
CLDN 18.2-mediated binding of IMAB362 -toxin conjugates was analyzed on (A) NCI- N87~CLDN18.2 cells ectopically overexpressing CLDN18.2 and on (B) the corresponding CLDN 18.2 negative human tumor cell line by flow cytometry at antibody concentrations up to 20 μg/ml. Data points (n=2 replicates) are depicted as mean ± SD. Figure 6: Binding specificities of IMAB362-DM4 and EVtAB362-vcMMAE.
Binding specificities of IMAB362 -toxin conjugates were determined on (A) HEK293-CLDN18.2, (B) HEK293-CLDN18.1 or (C) HEK293~mock cells as negative control. Binding was analyzed by flow cytometry at antibody concentrations up to 20 μg/ml. Data points (n=2 replicates) are depicted as mean ± SD.
Figure 7: Effect of EWAB362-DM4 and IMAB362-vcMMAE on viability of CLDN18J expressing human carcinoma cell lines.
Dose-response curves of IMAB362-DM4- and IMAB362-vcMMAE-mediated reduction of (A) NUGC-4 10cF7-5 sort 3a, (B) NCI-N87-CLDN18.2 and (C) BxPC-3~CLDN18.2 cell viability. IMAB362 was used as a negative control (no effect in viability assays under these conditions). Cells were incubated for 72 h in the presence of antibody at concentrations up to 16875 ng/ml. The reduction of cell viability was measured using a ΧΊΊ -based viability assay. Data points (n=3 replicates) are depicted as mean ± SD.
Figure 8: CLDN18.2 dependency of EVIAB362-vcMMAE mediated reduction of tumor cell viability .
Target dependency of IMAB362-vcMMA£-mediated reduction of cell viability was deteraiined on NCI-N87 cells (CLDN18.2 negative) and NCI-N87-CLDN18.2 cells ectopically expressing the target. The cells were incubated for 72 h with IMAB 362- vcMMAE or unconjugated IMAB362 at concentrations up to 1687S ng/ml. IMAB362 is known to have no activity under the experimental conditions used here. The reduction of cell viability was measured using a XTT-based viability assay. Data points (n=3 replicates) are depicted as mean ± SD.
Figure 9: Specificity of IMAB362-vcMMAE mediated reduction of cell viability.
Target specificity of IMAB362-vcMMAE-mediated reduction of cell viability was tested with stably transfected HEK293-CLDN18.2, HEK293-CLDN18.1 and HEK293~mock cells. Cells were incubated for 72 h in the presence of IMAB362-vcMMAEat concentrations up to 16875 ng/ml. The reduction of cell viability was measured using a XTT-based viability assay. Data points (n=3 replicates) are depicted as mean ± SD. Figure 10: Bystander activities of EMAB362-DM4 and IMAB362-vcMMAE.
IMAB362-DM4- and IMAB362-vcMMAE-mediated induction of bystander effects were determined in co-culture experiments using PA- 1 (Luc) cells (CLDN18.2 negative/luciferase positive) and NUGC-4 10cE8 cells (CLDN18.2 positive/luciferase negative). As background control PA-l(Luc) cells were incubated with either IMAB362-DM4- or IMAB362-vcMMAE. For treatment, cells were cultivated for 4 days in the presence of 200 ng/ml IMAB362-DM4, 800 ng/ml IMAB362-vcMMAE or 800 ng/ml IMAB362. Luciferase activity was measured.
Figure 11: Tumor growth inhibition of advanced BxPC-3~CLDN18.2 xenograft tumors by IM AB362-DM4.
CLDN18.2-positive BxPC-3~CLDN18.2 cells were engrafted subcutaneously in the flank of female athymic nude mice. On day 14, mice were organized in 4 groups and injected intravenously with a single dose of vehicle, 7.5 mg/kg, IS mg/kg IMAB362-DM4 or a repeated dose of IS mg/kg HMAB362-DM4 (day 14 and 21). The size of subcutaneous tumors was measured twice weekly (mean + SEM). Group size n=5. SD: single dose, RD: repeated dose.
Figure 12: Mean body weight of mice treated with IMAB362-DM4.
The body weight of BxPC-3~CLDN18.2 tumor bearing nude mice treated with a single dose of vehicle control, 7.5 mg/kg or IS mg/kg or repeated doses of IS mg/kg IMAB362-DM4, respectively, was monitored twice a week. The body weight of the 4 groups is presented as mean. Group size n=5.
Figure 13: Clinical chemistry parameters from the single and repeated dose administration of IMAB362-DM4 in xenograft nude mice- Clinical chemistry of BxPC-3~CLDNl 8.2-tumor bearing female nude mice treated intravenously with a single dose of vehicle, 7.5 mg/kg, 15 mg/kg IMAB362-DM4 or a repeated dose of 15 mg/kg IMAB362-DM4 was analyzed on day 49 after engraftment A) Alanine transaminase (GPT), B) aspartate transaminase (GOT), C) glutamate dehydrogenase, D) alkaline phosphatase, E) a-amylase, F) cholinesterase, G) creatine kinase (CK), H) lactate dehydrogenase (LDH), I) lipase, J) urea, K) glucose, L) total protein and M) albumin. Figure 14: Histological analysis of stomach sections from IMAB362-DM4 and vehicle treated mice.
Mice bearing BxPC-3~CLDN18.2 xenograft tumors were treated with EMAB362-DM4. On day 49 post-graft mice were sacrificed and selected organs dissected and formalin fixed. Sections of these FFPE tissue were stained with hematoxylin-eosin and examined microscopically for morphological alterations. (A, C) Stomach tissues of a representative mouse from the treatment group with the highest IMAB362-DM4 exposure (IS mg/kg IMAB362-DM4 on day 14 and day 21 post-graft). (B, D) Stomach tissue of mouse of the control group treated with the vehicle only. Magnification: see scale bar.
Figure 15: Tumor growth inhibition of advanced BxPC-3~CLDN18.2 xenograft tumors IMAB362-vcMMAE.
CLDN18.2-positive BxPC-3~CLDN18.2 cells were engrafted subcutaneously into the flank of female nude mice. On day 14, mice were organized in 4 groups and injected intravenously with a single dose of vehicle, 8 mg/kg, 16 mg/kg IMAB362-vcMMAE or a repeated dose of 16 mg/kg IMAB362-vcMMAE (day 14 and 21). The size of subcutaneous tumors was measured twice a week (mean + SEM). Group size n=5.
Figure 16: Mean body weight of mice treated with IMAB362-vcMMAE.
The body weight of tumor bearing female nude mice treated with a single dose of vehicle control, 8 mg/kg or 16 mg/kg, or repeated doses of 16 mg/kg IMAB362-vcMMAE was monitored twice a week. The body weight of the 4 groups is presented as mean. Group size n=5.
Figure 17: Clinical chemistry parameters from the single and repeated dose administration of IMAB362-vcMMAE in xenograft nude mice.
Clinical chemistry of BxPC-3~CLDN18.2-tumor bearing female nude mice intravenously treated with a single dose of vehicle, 8 mg/kg, 16 mg/kg IMAB362-vcMMAE or a repeated dose of 16 mg/kg IMAB362-vcMMAE was analyzed on day 37 after engraftment. A) Alanine transaminase (GPT), B) aspartate transaminase (GOT), C) glutamate dehydrogenase, D) alkaline phosphatase, E) a-amylase, F) cholinesterase, G) creatine kinase (CK), H) lactate dehydrogenase (LDH), I) lipase, J) urea, K) glucose, L) total protein and M) albumin. Figure 18: Dose-dependent antt-tumoral efficacy of IMAB362-DM4 and IMAB362- vcMMAE in an advanced human NCI-N87~CLDN18.2 gastric xenograft tumor model
NCI-N87-CLDN18.2 cells ectopically expressing human CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 10 post engraftment, mice were organized into groups and injected intravenously with a single dose of vehicle, 3.8, 7.6 or 15.2 mg/kg IMAB362-DM4 or 4, 8 or 16 mg/kg IMAB362-vcMMAE on day 13. Another control group received repeated doses of ~8 mg/kg IMAB362 twice a week by alternating IV and i.p. injections. Tumor volumes were measured two times a week. Animals were sacrificed when the tumor volume exceeded 1400 mm3 or when the tumors ulcerated. Statistical analysis of tumor growth was performed using Kruskal-Wallis and post-hoc Dunn Test. Survival was analyzed using Mantel Cox Test comparing the vehicle control group with IMAB362-DM4 and IMAB362-VCMMAE, respectively. (A-H) Tumor growth curves, (I, K) mean tumor growth (± SEM) and (J, L) survival plots of mice treated with vehicle control, IMAB362 or IMAB362-DM4 or IMAB362-vcMMAE. Group size: n=ll; *: p<0.05; ***p<0.001. The arrow indicates the start of treatment.
Figure 19: Antt-tumoral efficacy of IMAB362-DM4 and EMAB362-vcMMAE in an early human NUGC-4 10cF7-5 sort3a gastric xenograft tumor model.
NUGC-4 10cF7-5 sort3a cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 3, mice received vehicle, 15.2 mg/kg EMAB362-DM4 or 16 mg/kg IMAB362-vcMMAE by a single IV injection. Tumor volumes were measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm3 or when the tumors ulcerated or after the pre-defined observation period of 120 days. Statistical analysis of tumor growth was performed using Kruskal-Wallis and post-hoc Dunn Test Survival was analyzed using Mantel Cox Test (A-C) Tumor growth curves, (D) mean tumor growth (± SEM) and (E, F) survival plots of mice treated with vehicle control, IMAB362-DM4 or IMAB362-vcMMAE. Group size: n=10; ***: pO.OOl; **♦*: p<0.0001. The arrow indicates the time point of treatment
Figure 20: Dose-dependent antt-tumoral efficacy of IMAB362-DM4 and IMAB362- vcMMAE in an advanced human BxPC-3~CLDN18.2 pancreatic xenograft tumor model.
BxPC-3~CLDN18.2 cells ectopically expressing human CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 13, mice were organized into groups and injected intravenously with a single dose of vehicle, 3.8, 7.6 or 1S.2 mg/kg IMAB362-DM4 or 4, 8 or 16 mg/kg IMAB362-vcMMAE on day 14. Mice from the antibody control group received ~8 mg/kg unconjugated IMAB362 two times a week by alternating IV and i.p. injections. Tumor size was measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm3 or when the tumors ulcerated. Statistical analysis of tumor growth was performed using Kruskal-Wallis and post-hoc Dunn Test. Survival was analysed using Mantel Cox Test comparing the vehicle control group with HMAB362-DM4 and HMAB362-vcMMAE, respectively. (A-H) Tumor growth curves (I, K) mean tumor growth (± SEM) and (J, L) survival plots of mice treated with vehicle control, IMAB362, IMAB362- DM4 or IMAB362-VCMMAE. Group size: n=ll; p<0.05; **: p<0.01; ***: p<0.001; *♦**: pO.0001. The arrow indicates the time point of treatment
Figure 21: Anti-tumoral efficacy of IMAB362-DM4 and EVIAB362-vcMMAE in an early human DAN-G 1C5F2 pancreatic xenograft tumor model.
DAN-G 1CSF2 cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 3 post engraftment, mice were treated with a single IV injection of vehicle control, 1S.2 mg/kg IMAB362-DM4 or 16 mg/kg IMAB362-vcMMAE. Tumor volumes were measured twice a week. Animals were sacrificed when the mice lost more than 10% body weight due to cancer cachexia, when the tumors ulcerated or after the pre-defined observation period of 120 days. Statistical analysis of tumor growth was performed using Kruskal-Wallis and post-hoc Dunn Test. Survival was analyzed using Mantel Cox Test (A-C) Tumor growth curves (D) mean tumor growth (± SEM) and (E, F) survival plots of mice treated with vehicle control, IMAB362-DM4 or IMAB362-vcMMAE. Group size: n=10; **: pO.01; ***: p<0.001. The arrow indicates the time point of treatment
Figure 22: Histological analysis of stomach sections from BMAB362-vcMMAE and vehicle treated mice.
Mice bearing BxPC-3~CLDN18.2 xenograft tumors were treated with IMAB362-vcMMAE. On day 37 post-graft mice were sacrificed and selected organs dissected and formalin fixed. Sections of these FFPE tissues were stained with hematoxylin-eosin and examined microscopically for morphological alterations. (A, C) Stomach tissue of a representative mouse from the treatment group with the highest IMAB362-vcMMAE exposure (16 mg/kg IMAB362-VCMMAE on day 14 and day 21 post-graft). (B, D) Stomach tissue of a mouse of the control group treated with the vehicle only. Magnification: see scale bar. Figure 23: Induction of apoptosis by IMAB362-DM4 and EMAB362-vcMMAE.
IMAB362-DM4- and IMAB362-vcMMAE-mediated induction of apoptosis was determined by measuring caspase 3/7 activity and staining with annexin V using target positive NUGC-4 10cE8 cells. A) Caspase 3/7 activity was analyzed after the cells were incubated for 3 days in the presence of 2.5 μ^πιΐ IMAB362 antibodies (n=3 replicates, mean ± SD). B) Flow cytometric analysis of cells co-stained with annexin V and propidium iodide (PI) was performed 4 days after treatment with 2.5 μ^ηιΐ IMAB362 antibodies (n=3 replicates). Untreated cells served as control.
Figure 24: Anti-tumoral efficacy of IMAB362-DM4 and IMAB362-vcMMAE in an advanced human NUGC-4 10cF7-S sort3a gastric xenograft tumor model.
NUGC-4 10cF7-5 sort3a cells endogenously expressing CLDN18.2 were engrafted subcutaneously into the flank of female nude mice. On day 10, mice received vehicle, 15.2 mg/kg MAB362-DM4 or 16 mg/kg IMAB362-vcMMAE by a single IV injection. Tumor volumes were measured twice a week. Animals were sacrificed when the tumor volume exceeded 1400 mm3, when tumors ulcerated or after the pre-defined observation period of 120 days. Statistical analysis of tumor growth was performed using Kruskal-Wallis and post- hoc Dunn Test. Survival was analyzed using Mantel Cox Test (A-C) Tumor growth curves, (D) mean tumor growth (± SEM) and (E, F) survival plots of mice treated with vehicle control, IMAB362-DM4 or lMAB362-vcMMAE. Group size: n=10; *: p<0.05; ***: p<0.001. The arrow indicates the time point of treatment.
DETAILED DESCRIPTION OF THE INVENTION
Although the present invention is described in detail below, it is to be understood that this invention is not limited to the particular methodologies, protocols and reagents described herein as these may vary. It is also to be understood that the terminology used herein is for the purpose of describing particular embodiments only, and is not intended to limit the scope of the present invention which will be limited only by the appended claims. Unless defined otherwise, all technical and scientific terms used herein have the same meanings as commonly understood by one of ordinary skill in the art. In the following, the elements of the present invention will be described. These elements are listed with specific embodiments, however, it should be understood that they may be combined in any manner and in any number to create additional embodiments. The variously described examples and preferred embodiments should not be construed to limit the present invention to only the explicitly described embodiments. This description should be understood to support and encompass embodiments which combine the explicitly described embodiments with any number of the disclosed and/or preferred elements. Furthermore, any permutations and combinations of all described elements in this application should be considered disclosed by the description of the present application unless the context indicates otherwise.
Preferably, the terms used herein are defined as described in "A multilingual glossary of biotechnological terms: (IUPAC Recommendations) " , H.G.W. Leuenberger, B. Nagel, and H. Kolbl, Eds., Helvetica Chimica Acta, CH-4010 Basel, Switzerland, (1995).
The practice of the present invention will employ, unless otherwise indicated, conventional methods of chemistry, biochemistry, cell biology, immunology, and recombinant DNA techniques which are explained in the literature in the field (cf., e.g., Molecular Cloning: A Laboratory Manual, 2nd Edition, J. Sambrook et al. eds., Cold Spring Harbor Laboratory Press, Cold Spring Harbor 1989).
Throughout this specification and the claims which follow, unless the context requires otherwise, the word "comprise", and variations such as "comprises" and "comprising", will be understood to imply the inclusion of a stated member, integer or step or group of members, integers or steps but not the exclusion of any other member, integer or step or group of members, integers or steps although in some embodiments such other member, integer or step or group of members, integers or steps may be excluded, i.e. the subject-matter consists in the inclusion of a stated member, integer or step or group of members, integers or steps. The terms "a" and "an" and "the" and similar reference used in the context of describing the invention (especially in the context of the claims) are to be construed to cover both the singular and the plural, unless otherwise indicated herein or clearly contradicted by context Recitation of ranges of values herein is merely intended to serve as a shorthand method of referring individually to each separate value falling within the range. Unless otherwise indicated herein, each individual value is incorporated into the specification as if it were individually recited herein. All methods described herein can be performed in any suitable order unless otherwise indicated herein or otherwise clearly contradicted by context. The use of any and all examples, or exemplary language (e.g., "such as"), provided herein is intended merely to better illustrate the invention and does not pose a limitation on the scope of the invention otherwise claimed. No language in the specification should be construed as indicating any non-claimed element essential to the practice of the invention.
Several documents are cited throughout the text of this specification. Each of the documents cited herein (including all patents, patent applications, scientific publications, manufacturer's specifications, instructions, etc.), whether supra or infra, are hereby incorporated by reference in their entirety. Nothing herein is to be construed as an admission that the invention is not entitled to antedate such disclosure by virtue of prior invention.
Claudins are a family of proteins that are the most important components of tight junctions, where they establish the paracellular barrier that controls the flow of molecules in the intercellular space between cells of an epithelium. Claudins are transmembrane proteins spanning the membrane 4 times with the N-terminal and the C-terminal end both located in the cytoplasm. The first extracellular loop or domain consists on average of 53 amino acids, and the second extracellular loop or domain consists of around 24 amino acids. Cell surface proteins of the claudin family, such as CLDN18.2, are expressed in tumors of various origins, and are particularly suited as target structures in connection with antibody-mediated cancer immunotherapy due to their selective expression (no expression in a toxicity relevant normal tissue) and localization to the plasma membrane.
The term "CLDN" as used herein means claudin and includes CLDN18.2. Preferably, a claudin is a human claudin.
The term "CLDN18" relates to claudin 18 and includes any variants, including claudin 18 splice variant 1 (claudin 18.1 (CLDN18.1)) and claudin 18 splice variant 2 (claudin 18.2 (CLDN18.2)).
The term "CLDN18.2" preferably relates to human CLDN18.2, and, in particular, to a protein comprising, preferably consisting of the amino acid sequence according to SEQ ID NO: 1 of the sequence listing or a variant of said amino acid sequence. The first extracellular loop or domain of CLDN18.2 preferably comprises amino acids 27 to 81, more preferably amino acids 29 to 78 of the amino acid sequence shown in SEQ ID NO: 1. The second extracellular loop or domain of CLDN18.2 preferably comprises amino acids 140 to 180 of the amino acid sequence shown in SEQ ID NO: 1. Said first and second extracellular loops or domains preferably form the extracellular portion or domain of CLDN18.2.
CLDN18.2 is selectively expressed in normal tissues in differentiated epithelial cells of the gastric mucosa. CLDN18.2 is expressed in cancers of various origins such as pancreatic carcinoma, esophageal carcinoma, gastric carcinoma, bronchial carcinoma, breast carcinoma, and ENT tumors. CLDN18.2 is a valuable target for the prevention and/or treatment of primary tumors, such as gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancers of the gallbladder, and metastases thereof, in particular gastric cancer metastasis such as Krukenberg tumors, peritoneal metastasis, and lymph node metastasis.
The term "CLDN18.1" preferably relates to human CLDN18.1, and, in particular, to a protein comprising, preferably consisting of the amino acid sequence according to SEQ ID NO: 2 of the sequence listing or a variant of said amino acid sequence.
The term "variant" according to the invention refers, in particular, to mutants, splice variants, conformations, isoforms, allelic variants, species variants and species homologs, in particular those which are naturally present An allelic variant relates to an alteration in the normal sequence of a gene, the significance of which is often unclear. Complete gene sequencing often identifies numerous allelic variants for a given gene. A species homolog is a nucleic acid or amino acid sequence with a different species of origin from that of a given nucleic acid or amino acid sequence. The term "variant" shall encompass any posttranslationally modified variants and conformation variants.
According to the invention, the term "CLDN18.2-expressing cancer" or "CLDN18.2-positive cancer" means a cancer involving cancer cells expressing CLDN18.2, preferably on the surface of said cancer cells. "Cell surface" is used in accordance with its normal meaning in the art, and thus includes the outside of the cell which is accessible to binding by proteins and other molecules.
CLDN18.2 is expressed on the surface of cells if it is located at the surface of said cells and is accessible to binding by CLDN18.2-specific antibodies added to the cells.
The term "extracellular portion" or "extracellular domain" in the context of the present invention refers to a part of a molecule such as a protein that is facing the extracellular space of a cell and preferably is accessible from the outside of said cell, e.g., by antigen-binding molecules such as antibodies located outside the cell. Preferably, the term refers to one or more extracellular loops or domains or a fragment thereof.
According to the invention, CLDN18.2 is not substantially expressed in a cell if the level of expression is lower compared to expression in stomach cells or stomach tissue. Preferably, the level of expression is less than 10%, preferably less than 5%, 3%, 2%, 1%, 0.5%, 0.1% or 0.05% of the expression in stomach cells or stomach tissue or even lower. Preferably, CLDN18.2 is not substantially expressed in a cell if the level of expression exceeds the level of expression in non-cancerous tissue other than stomach by no more than 2-fold, preferably 1,5-fold, and preferably does not exceed the level of expression in said non-cancerous tissue. Preferably, CLDN18.2 is not substantially expressed in a cell if the level of expression is below the detection limit and/or if the level of expression is too low to allow binding by CLDN18.2-specific antibodies added to the cells.
According to the invention, CLDN18.2 is expressed in a cell if the level of expression exceeds the level of expression in non-cancerous tissue other than stomach preferably by more than 2- fold, preferably 10-fold, 100-fold, 1000-fold, or 10000-fold. Preferably, CLDN18.2 is expressed in a cell if the level of expression is above the detection limit and/or if the level of expression is high enough to allow binding by CLDN18.2-specific antibodies added to the cells. Preferably, CLDN18.2 expressed in a cell is expressed or exposed on the surface of said cell.
The term "disease" refers to an abnormal condition mat affects the body of an individual. A disease is often construed as a medical condition associated with specific symptoms and signs. A disease may be caused by factors originally from an external source, such as infectious disease, or it may be caused by internal dysfunctions, such as autoimmune diseases. In humans, "disease" is often used more broadly to refer to any condition that causes pain, dysfunction, distress, social problems, or death to the individual afflicted, or similar problems for those in contact with the individual. In this broader sense, it sometimes includes injuries, disabilities, disorders, syndromes, infections, isolated symptoms, deviant behaviors, and atypical variations of structure and function, while in other contexts and for other purposes these may be considered distinguishable categories. Diseases usually affect individuals not only physically, but also emotionally, as contracting and living with many diseases can alter one's perspective on life, and one's personality. According to the invention, the term "disease" includes cancer, in particular those forms of cancer described herein. Any reference herein to cancer or particular forms of cancer also includes cancer metastasis thereof. In a preferred embodiment, a disease to be treated according to the present application involves cells expressing CLDN18.2.
"Disease involving cells expressing CLDN18.2" or "disease associated with cells expressing CLDN18.2" or similar expressions means according to the invention that CLDN18.2 is expressed in cells of a diseased tissue or organ. In one embodiment, expression of CLDN18.2 in cells of a diseased tissue or organ is increased compared to the state in a corresponding healthy tissue or organ. An increase refers to an increase by at least 10%, in particular at least 20%, at least 50%, at least 100%, at least 200%, at least 500%, at least 1000%, at least 10000% or even more. In one embodiment, expression is only found in a diseased tissue, while expression in a corresponding healthy tissue is repressed. According to the invention, diseases associated with cells expressing CLDN18.2 include cancer diseases. Furthermore, according to the invention, cancer diseases preferably are those wherein the cancer cells express CLDN18.2.
The terms "cancer disease" or "cancer" refer to or describe the physiological condition in an individual that is typically characterized by unregulated cell growth. Examples of cancers include, but are not limited to, carcinoma, lymphoma, blastema, sarcoma, and leukemia. More particularly, examples of such cancers include bone cancer, blood cancer, lung cancer, liver cancer, pancreatic cancer, skin cancer, cancer of the head or neck, cutaneous or intraocular melanoma, uterine cancer, ovarian cancer, rectal cancer, cancer of the anal region, stomach cancer, colon cancer, breast cancer, prostate cancer, uterine cancer, carcinoma of the sexual and reproductive organs, Hodgkin's Disease, cancer of the esophagus, cancer of the small intestine, cancer of the endocrine system, cancer of the thyroid gland, cancer of the parathyroid gland, cancer of the adrenal gland, sarcoma of soft tissue, cancer of the bladder, cancer of the kidney, renal cell carcinoma, carcinoma of the renal pelvis, neoplasms of the central nervous system (CNS), neuroectodermal cancer, spinal axis tumors, glioma, meningioma, and pituitary adenoma. The term "cancer" according to the invention also comprises cancer metastases. Preferably, a "cancer disease" is characterized by cells expressing CLDN18.2 and a cancer cell expresses CLDN18.2. A cell expressing CLDN18.2 preferably is a cancer cell, preferably of the cancers described herein.
According to the invention, the term "tumor" or "tumor disease" refers to an abnormal growth of cells (called neoplastic cells, tumorigenous cells or tumor cells) preferably forming a swelling or lesion. By "tumor cell" is meant an abnormal cell that grows by a rapid, uncontrolled cellular proliferation and continues to grow after the stimuli that initiated the new growth cease. Tumors show partial or complete lack of structural organization and functional coordination with the normal tissue, and usually form a distinct mass of tissue, which may be either benign, pre-malignant or malignant. According to the invention, a "cancer disease" preferably is a "tumor disease". However, generally, the terms "cancer" and "tumor" are used interchangeably herein.
In one embodiment, a cancer according to the invention involves cancer cells expressing CLDN18.2. In one embodiment, the cancer is CLDN18.2 positive. In one embodiment, expression of CLDN18.2 is at the surface of the cells. In one embodiment, at least 50%, preferably 60%, 70%, 80% or 90% of the cancer cells are CLDN18.2 positive and/or at least 40%, preferably at least 50% of the cancer cells are positive for surface expression of CLDN18.2. In one embodiment, at least 95% or at least 98% of the cancer cells are CLDN18.2 positive. In one embodiment, at least 60%, at least 70%, at least 80% or at least 90% of the cancer cells are positive for surface expression of CLDN18.2.
In one embodiment, a CLDN 18.2-expressing cancer, a cancer involving cancer cells expressing CLDN18.2 or a CLDN18.2 positive cancer is selected from the group consisting of gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, and cancer of the gallbladder and metastases thereof, in particular gastric cancer metastasis such as Knikenberg tumors, peritoneal metastasis and lymph node metastasis. In one embodiment, the cancer is an adenocarcinoma, in particular an advanced adenocarcinoma. Particularly preferred cancer diseases are adenocarcinomas of the stomach, the esophagus, the pancreatic duct, the bile ducts, the lung and the ovary. In one embodiment, the cancer is selected from the group consisting of cancer of the stomach, cancer of the esophagus, in particular the lower esophagus, cancer of the eso- gastric junction and gastroesophageal cancer. In a particularly preferred embodiment, the cancer is gastroesophageal cancer such as metastatic, refractory or recurrent advanced gastroesophageal cancer.
According to the invention, a "carcinoma" is a malignant tumor derived from epithelial cells. This group represents the most common cancers, including the common forms of breast, prostate, lung and colon cancer.
"Adenocarcinoma" is a cancer that originates in glandular tissue. This tissue is also part of a larger tissue category known as epithelial tissue. Epithelial tissue includes skin, glands and a variety of other tissue that lines the cavities and organs of the body. Epithelium is derived embryologically from ectoderm, endoderm and mesoderm. To be classified as adenocarcinoma, the cells do not necessarily need to be part of a gland, as long as they have secretory properties. This form of carcinoma can occur in some higher mammals, including humans. Well differentiated adenocarcinomas tend to resemble the glandular tissue that they are derived from, while poorly differentiated may not By staining the cells from a biopsy, a pathologist will determine whether the tumor is an adenocarcinoma or some other type of cancer. Adenocarcinomas can arise in many tissues of the body due to the ubiquitous nature of glands within the body. While each gland may not be secreting the same substance, as long as there is an exocrine function to the cell, it is considered glandular and its malignant form is therefore named adenocarcinoma. Malignant adenocarcinomas invade other tissues and often metastasize given enough time to do so. Ovarian adenocarcinoma is the most common type of ovarian carcinoma. It includes the serous and mucinous adenocarcinomas, the clear cell adenocarcinoma and the endometrioid adenocarcinoma.
By "metastasis" is meant the spread of cancer cells from its original site to another part of the body. The formation of metastasis is a very complex process and depends on detachment of malignant cells from the primary tumor, invasion of the extracellular matrix, penetration of the endothelial basement membranes to enter the body cavity and vessels, and then, after being transported by the blood, infiltration of target organs. Finally, the growth of a new tumor at the target site depends on angiogenesis. Tumor metastasis often occurs even after the removal of the primary tumor because tumor cells or components may remain and develop metastatic potential. In one embodiment, the term "metastasis" according to the invention relates to "distant metastasis" which relates to a metastasis which is remote from the primary tumor and the regional lymph node system. In one embodiment, the term "metastasis" according to the invention relates to lymph node metastasis. One particular form of metastasis which is treatable using the therapy of the invention is metastasis originating from gastric cancer as primary site. In preferred embodiments such gastric cancer metastasis is Krukenberg tumors, peritoneal metastasis and/or lymph node metastasis.
Krukenberg tumor is an uncommon metastatic tumor of the ovary accounting for 1% to 2% of all ovarian tumors. Prognosis of Krukenberg tumor is still very poor and there is no established treatment for Krukenberg tumors. Krukenberg tumor is a metastatic signet ring cell adenocarcinoma of the ovary. Stomach is the primary site in most Krukenberg tumor cases (70%). Carcinomas of colon, appendix, and breast (mainly invasive lobular carcinoma) are the next most common primary sites. Rare cases of Krukenberg tumor originating from carcinomas of the gallbladder, biliary tract, pancreas, small intestine, ampulla of Vater, cervix, and urinary bladder/urachus have been reported. The interval between the diagnosis of a primary carcinoma and the subsequent discovery of ovarian involvement is usually 6 months or less, but longer periods have been reported. In many cases, the primary tumor is very small and can escape detection. A history of a prior carcinoma of the stomach or another organ can be obtained in only 20% to 30% of the cases.
Patients with Krukenberg tumors have an overall mortality rate that is significantly high. Most patients die within 2 years (median survival, 14 months). Several studies show that the prognosis is poor when the primary tumor is identified after the metastasis to the ovary is discovered, and the prognosis becomes worse if the primary tumor remains covert.
No optimal treatment strategy for Krukenberg tumors has been clearly established in the literature. Whether a surgical resection should be performed has not been adequately addressed. Chemotherapy or radiotherapy has no significant effect on prognosis of patients with Krukenberg tumors. The term "(therapeutic) treatment", in particular in connection with the treatment of cancer as used herein, relates to any treatment which aims at improving the health status and/or prolonging (increasing) the lifespan of a patient. Said treatment may eliminate cancer, reduce the size or the number of tumors in a patient, arrest or slow the development of cancer in a patient, inhibit or slow the development of new cancer in a patient, decrease the frequency or severity of symptoms in a patient, and/or decrease recurrences in a patient who currently has or who previously has had cancer. A (therapeutic) treatment of cancer may be selected from the group consisting of surgery, chemotherapy, radiation therapy and targeted therapy.
The term "surgery", as used herein, includes the removal of tumors in an operation. It is a common treatment for cancer. A surgeon may remove the tumors using local excision.
The term "chemotherapy", as used herein, refers to the use of chemotherapeutic agents or combinations of chemotherapeutic agents, preferably to stop the growth of cancer cells, either by killing the cells or by stopping them from dividing. When chemotherapy is taken by mouth or injected into a vein or muscle, the drugs enter the bloodstream and can reach cancer cells throughout the body (systemic chemotherapy). When chemotherapy is placed directly into the cerebrospinal fluid, an organ, or a body cavity such as the abdomen, the drugs mainly affect cancer cells in those areas (regional chemotherapy).
Chemotherapeutic agents according to the invention include cytostatic compounds and cytotoxic compounds. Traditional chemotherapeutic agents act by killing cells that divide rapidly, one of the main properties of most cancer cells. This means that chemotherapy also harms cells that divide rapidly under normal circumstances such as cells in the bone marrow, digestive tract, and hair follicles. This results in the most common side-effects of chemotherapy. According to the invention, the term "chemotherapy" preferably does not include antibodies that target proteins that are abnormally expressed in cancer cells (tumor antigens such as CLDN18.2) and act through recruiting the patient's immune system to destroy tumor cells. Antibodies that target proteins that are abnormally expressed in cancer cells (tumor antigens such as CLDN18.2) and act through a therapeutic moiety or agent conjugated to the antibody, however, can be viewed as a form of chemotherapy. However, in the strictest sense, the term "chemotherapy" according to the invention does not include targeted therapy. According to the invention, the term "targeted therapy" relates to any therapy that can be used to target preferentially diseased cells such as cancer cells while non-diseased cells are not targeted or targeted to a lesser extent Targeting of diseased cells preferably results in killing and/or impairment of proliferation or viability of diseased cells. Such therapy includes i) antibodies, antibody fragments, and proteins that are either naked or conjugated to a therapeutic moiety that target certain cell surface targets on diseased cells, such as tumor antigens, for example, CLDN18.2, (e.g. antibodies or antibody conjugates against CLDN18.2 as described herein) or ii) small molecules which impair proliferation or viability of diseased cells. In a specific embodiment, the agent binds to an antigen that is expressed at a greater level on diseased than on normal stem cells. In a specific embodiment, the agent binds specifically to a tumor antigen. Traditional chemotherapy or radiotherapy is not considered a "targeted therapy" despite its often being aimed at the tumours. Furthermore, the term "antibody therapy" according to the invention preferably does not include therapy with antibodies, fragments or derivatives thereof that are conjugated to a therapeutic moiety but merely relates to therapy with antibodies, fragments or derivatives thereof acting through recruiting the patient's immune system to destroy tumor cells.
In the context of the present invention, terms such as "protect", "prevent" or "prophylactic" relate to the prevention of the occurrence and/or the propagation of a disease in a subject and, in particular, to minimizing the chance that a subject will develop a disease or to delaying the development of a disease. For example, a subject at risk for cancer would be a candidate for therapy to prevent cancer.
By "being at risk" is meant a subject that is identified as having a higher than normal chance of developing a disease, in particular cancer, compared to the general population. In addition, a subject who has had, or who currently has, a disease, in particular cancer, is a subject who has an increased risk for developing a disease, as such a subject may continue to develop a disease. Subjects who currently have, or who have had, a cancer also have an increased risk for cancer metastases.
The terms "individual" and "subject" are used herein interchangeably. They refer to human beings, non-human primates or other mammals (e.g. mouse, rat, rabbit, dog, cat, cattle, swine, sheep, horse or primate) that can be afflicted with or are susceptible to a disease or disorder (e.g., cancer) but may or may not have the disease or disorder. In many embodiments, the individual is a human being. Unless otherwise stated, the terms "individual" and "subject" do not denote a particular age, and thus encompass adults, elderlies, children, and newborns. In preferred embodiments of the present invention, the "individual" or "subject" is a "patient". The term "patient" means according to the invention a subject for treatment, in particular a diseased subject.
The term "antigen" relates to an agent such as a protein or peptide comprising an epitope against which an immune response is directed and/or is to be directed. In a preferred embodiment, an antigen is a tumor-associated antigen, such as CLDN18.2, i.e., a constituent of cancer cells which may be derived from the cytoplasm, the cell surface and the cell nucleus, in particular those antigens which are produced, preferably in large quantity, intracellular or as surface antigens on cancer cells.
In the context of the present invention, the term "tumor-associated antigen" or "tumor antigen" preferably relates to proteins that are under normal conditions specifically expressed in a limited number of tissues and/or organs or in specific developmental stages and are expressed or aberrantly expressed in one or more tumor or cancer tissues. In the context of the present invention, the tumor-associated antigen is preferably associated with the cell surface of a cancer cell and is preferably not or only rarely expressed in normal tissues.
The term "epitope" refers to an antigenic determinant in a molecule, i.e., to the part in a molecule that is recognized by the immune system, for example, that is recognized by an antibody. For example, epitopes are the discrete, three-dimensional sites on an antigen, which are recognized by the immune system. Epitopes usually consist of chemically active surface groupings of molecules such as amino acids or sugar side chains and usually have specific three dimensional structural characteristics, as well as specific charge characteristics. Conformational and non-conformational epitopes are distinguished in that the binding to the former but not the latter is lost in the presence of denaturing solvents. An epitope of a protein such as CLDN18.2 preferably comprises a continuous or discontinuous portion of said protein and is preferably between S and 100, preferably between 5 and 50, more preferably between 8 and 30, most preferably between 10 and 25 amino acids in length, for example, the epitope may be preferably 8, 9, 10, 11, 12, 13, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, or 25 amino acids in length. The term "antibody" includes a glycoprotein comprising at least two heavy (H) chains and two light (L) chains inter-connected by disulfide bonds, and any molecule comprising an antigen-binding portion of such glycoprotein. The term "antibody" includes monoclonal antibodies, recombinant antibodies, human antibodies, humanized antibodies, chimeric antibodies, molecules comprising binding fragments or derivatives of antibodies, including, without limitation, single chain antibodies, e.g., scFv's and antigen-binding antibody fragments such as Fab and Fab' fragments and also includes all recombinant forms of antibodies, e.g., antibodies expressed in prokaryotes, unglycosylated antibodies, and any antigen-binding antibody fragments and derivatives as described herein. Each heavy chain is comprised of a heavy chain variable region (abbreviated herein as VH) and a heavy chain constant region. Each light chain is comprised of a light chain variable region (abbreviated herein as VL) and a light chain constant region. The VH and VL regions can be further subdivided into regions of hypervariability, termed complementarity determining regions (CDR), interspersed with regions that are more conserved, termed framework regions (FR). Each VH and VL is composed of three CDRs and four FRs, arranged from ammo-terminus to carboxy-terminus in the following order: FR1, CDR1, FR2, CDR2, FR3, CDR3, FR4. The variable regions of the heavy and light chains contain a binding domain that interacts with an antigen. The constant regions of the antibodies may mediate the binding of the immunoglobulin to host tissues or factors, including various cells of the immune system (e.g., effector cells) and the first component (Clq) of the classical complement system.
The term "monoclonal antibody" as used herein refers to a preparation of antibody molecules of single molecular composition. A monoclonal antibody displays a single binding specificity and affinity. In one embodiment, the monoclonal antibodies are produced by a hybridoma which includes a B cell obtained from a non-human animal, e.g., mouse, fused to an immortalized cell.
The term "recombinant antibody", as used herein, includes all antibodies that are prepared, expressed, created or isolated by recombinant means, such as (a) antibodies isolated from an animal (e.g., a mouse) that is transgenic or transchromosomal with respect to the immunoglobulin genes or a hybridoma prepared therefrom, (b) antibodies isolated from a host cell transformed to express the antibody, e.g., from a transfectoma, (c) antibodies isolated from a recombinant, combinatorial antibody library, and (d) antibodies prepared, expressed, created or isolated by any other means that involve splicing of immunoglobulin gene sequences to other DNA sequences.
The term "human antibody", as used herein, is intended to include antibodies having variable and constant regions derived from human germline immunoglobulin sequences. Human antibodies may include amino acid residues not encoded by human germline immunoglobulin sequences (e.g., mutations introduced by random or site-specific mutagenesis in vitro or by somatic mutation in vivo).
The term "humanized antibody" refers to a molecule having an antigen binding site that is substantially derived from an immunoglobulin from a non-human species, wherein the remaining immunoglobulin structure of the molecule is based upon the structure and/or sequence of a human immunoglobulin. The antigen binding site may either comprise complete variable domains fused onto constant domains or only the complementarity determining regions (CDR) grafted onto appropriate framework regions in the variable domains. Antigen binding sites may be wild-type or modified by one or more amino acid substitutions, e.g. modified to resemble human immunoglobulins more closely. Some forms of humanized antibodies preserve all CDR sequences (for example a humanized mouse antibody which contains all six CDRs from the mouse antibody). Other forms have one or more CDRs which are altered with respect to the original antibody.
The term "chimeric antibody" refers to those antibodies wherein one portion of each of the amino acid sequences of heavy and light chains is homologous to corresponding sequences in antibodies derived from a particular species or belonging to a particular class, while the remaining segment of the chain is homologous to corresponding sequences in another. Typically the variable region of both light and heavy chains mimics the variable regions of antibodies derived from one species of mammals, while the constant portions are homologous to sequences of antibodies derived from another. One clear advantage to such chimeric forms is that the variable region can conveniently be derived from presently known sources using readily available B-cells or hybridomas from non-human host organisms in combination with constant regions derived from, for example, human cell preparations. While the variable region has the advantage of ease of preparation and the specificity is not affected by the source, the constant region being human, is less likely to elicit an immune response from a human subject when the antibodies are injected than would the constant region from a non human source. However the definition is not limited to this particular example.
The terms "antigen-binding portion" of an antibody (or simply "binding portion") or "antigen- binding fragment" of an antibody (or simply "binding fragment") or similar terms refer to one or more fragments of an antibody that retain the ability to specifically bind to an antigen. It has been shown that the antigen-binding function of an antibody can be performed by fragments of a full-length antibody. Examples of binding fragments encompassed within the term "antigen-binding portion" of an antibody include (i) Fab fragments, monovalent fragments consisting of the VL, VH, CL and CH domains; (ii) F(ab')2 fragments, bivalent fragments comprising two Fab fragments linked by a disulfide bridge at the hinge region; (iii) Fd fragments consisting of the VH and CH domains; (iv) Fv fragments consisting of the VL and VH domains of a single arm of an antibody, (v) dAb fragments (Ward et al., (1989) Nature 341: 544-546), which consist of a VH domain; (vi) isolated complementarity detennining regions (CDR), and (vii) combinations of two or more isolated CDRs which may optionally be joined by a synthetic linker. Furthermore, although the two domains of the Fv fragment, VL and VH, are coded for by separate genes, they can be joined, using recombinant methods, by a synthetic linker that enables them to be made as a single protein chain in which the VL and VH regions pair to form monovalent molecules (known as single chain Fv (scFv); see e.g., Bird et al. (1988) Science 242: 423-426; and Huston et al. (1988) Proc. Natl. Acad. Sci. USA 85: 5879-5883). Such single chain antibodies are also intended to be encompassed within the term "antigen-binding fragment" of an antibody. A further example is binding- domain immunoglobulin fusion proteins comprising (i) a binding domain polypeptide that is fused to an immunoglobulin hinge region polypeptide, (ii) an immunoglobulin heavy chain CH2 constant region fused to the hinge region, and (iii) an immunoglobulin heavy chain CH3 constant region fused to the CH2 constant region. The binding domain polypeptide can be a heavy chain variable region or a light chain variable region. The binding-domain immunoglobulin fusion proteins are further disclosed in US 2003/0118592 and US 2003/0133939. These antibody fragments are obtained using conventional techniques known to those with skill in the art, and the fragments are screened for utility in the same manner as are intact antibodies.
Naturally occurring antibodies are generally monospecific, i.e. they bind to a single antigen. The present invention comprises antibodies binding to a target cell (by engaging a tumor antigen) and a second entity such as a cytotoxic cell (e.g. by engaging the CD3 receptor). The antibodies of the present invention may be bispecific or multispecific such as trispecific, tetraspecific and so on.
The term "bispecific molecule" is intended to include an agent which has two different binding specificities. For example, the molecule may bind to, or interact with (a) a cell surface antigen such as CLDN18.2, and (b) a receptor such as an Fc receptor on the surface of an effector cell. The term "multispecific molecule" is intended to include an agent which has more than two different binding specificities. For example, the molecule may bind to, or interact with (a) a cell surface antigen such as CLDN18.2, (b) a receptor such as an Fc receptor on the surface of an effector cell, and (c) at least one other component Accordingly, the term "antibody" includes, but is not limited to, bispecific, trispecific, tetraspecific, and other multispecific molecules which are directed to a tumor antigen, and to other targets, such as Fc receptors on effector cells. The term "bispecific antibodies" also includes diabodies. Diabodies are bivalent, bispecific antibodies in which the VH and VL domains are expressed on a single polypeptide chain, but using a linker that is too short to allow for pairing between the two domains on the same chain, thereby forcing the domains to pair with complementary domains of another chain and creating two antigen binding sites (see e.g. , Holliger, P., et al. (1993) Proc. Natl. Acad. Sci. USA 90: 6444-6448; Poljak, R. J., et al. (1994) Structure 2: 1121-1123).
Antibodies may be derived from different species, including but not limited to mouse, rat, rabbit, guinea pig and human.
As used herein, "isotype" refers to the antibody class (e.g., IgM or IgGl) that is encoded by heavy chain constant region genes.
As used herein, "isotype switching" refers to the phenomenon by which the class, or isotype, of an antibody changes from one Ig class to one of the other Ig classes.
Antibodies described herein include IgA such as IgAl or IgA2, IgGl, IgG2, IgG3, IgG4, IgE, IgM, and IgD antibodies. In various embodiments, the antibody is an IgGl antibody, more particularly an IgGl, kappa or IgGl, lambda isotype (i.e. IgGl, κ, λ), an IgG2a antibody (e.g. IgG2a, K, λ), an IgG2b antibody (e.g. IgG2b, κ, λ), an IgG3 antibody (e.g. IgG3, κ, λ) or an IgG4 antibody (e.g. IgG4, κ, λ).
As used herein, a "heterologous antibody" is defined in relation to a transgenic organism producing such an antibody. This term refers to an antibody having an amino acid sequence or an encoding nucleic acid sequence corresponding to that found in an organism not consisting of the transgenic organism, and being generally derived from a species other than the transgenic organism.
As used herein, a "heterohybrid antibody" refers to an antibody having light and heavy chains of different organismal origins. For example, an antibody having a human heavy chain associated with a murine light chain is a heterohybrid antibody.
The antibodies described herein are preferably isolated. An "isolated antibody" as used herein, is intended to refer to an antibody which is substantially free of other antibodies having different antigenic specificities (e.g., an isolated antibody that specifically binds to a tumor antigen is substantially free of antibodies that specifically bind antigens other than the tumor antigen). An isolated antibody that specifically binds to an epitope, isoform or variant of a human tumor antigen may, however, have cross-reactivity to other related antigens, e.g., from other species (e.g., tumor antigen species homologs). Moreover, an isolated antibody may be substantially free of other cellular material and/or chemicals. In one embodiment of the invention, a combination of "isolated" monoclonal antibodies relates to antibodies having different specificities and being combined in a well defined composition or mixture.
In the context of the present invention, an antibody is capable of acting through recruiting the patient's immune system to destroy tumor cells if the antibody, in particular when bound to its target such as a tumor antigen on a diseased cell, elicits immune effector functions as described herein. Preferably, said immune effector functions are directed against cells such as cancer cells carrying a tumor antigen such as CLDN18.2 on their surface.
The term "immune effector functions" in the context of the present invention includes any functions mediated by components of the immune system that result e.g. in the inhibition of tumor growth and/or inhibition of tumor development, including inhibition of tumor dissemination and metastasis. Preferably, immune effector functions result in killing of cancer cells. Such functions comprise complement dependent cytotoxicity (CDC), antibody- dependent cell-mediated cytotoxicity (ADCC), antibody-dependent cell-mediated phagocytosis (ADCP), induction of apoptosis in the cells carrying the tumor antigen, cytolysis of the cells carrying the tumor antigen, and/or inhibition of proliferation of the cells carrying the tumor antigen.
Antibody-dependent cell-mediated cytotoxicity
ADCC describes the cell-killing ability of effector cells, in particular lymphocytes, which preferably requires the target cell being marked by an antibody.
ADCC preferably occurs when antibodies bind to antigens on tumor cells and the antibody Fc domains engage Fc receptors (FcR) on the surface of immune effector cells. Several families of Fc receptors have been identified, and specific cell populations characteristically express defined Fc receptors. ADCC can be viewed as a mechanism to directly induce a variable degree of immediate tumor destruction that leads to antigen presentation and the induction of tumor-directed T-cell responses. Preferably, in vivo induction of ADCC will lead to tumor- directed T-cell responses and host-derived antibody responses.
Complement-dependent cytotoxicity
CDC is another cell-killing method that can be directed by antibodies. IgM is the most effective isotype for complement activation. IgGl and IgG3 are also both very effective at directing CDC via the classical complement-activation pathway. Preferably, in this cascade, the formation of antigen-antibody complexes results in the uncloaking of multiple Clq binding sites in close proximity on the CH2 domains of participating antibody molecules such as IgG molecules (Clq is one of three subcomponents of complement CI). Preferably these uncloaked Clq binding sites convert the previously low-affinity Clq-IgG interaction to one of high avidity, which triggers a cascade of events involving a series of other complement proteins and leads to the proteolytic release of the effector-cell chemotactic/activating agents C3a and CSa. Preferably, the complement cascade ends in the formation of a membrane attack complex, which creates pores in the cell membrane that facilitate free passage of water and solutes into and out of the cell.
As used herein, an antibody is "derived from" a particular germline sequence if the antibody is obtained from a system by immunizing an animal or by screening an immunoglobulin gene library, and wherein the selected antibody is at least 90%, more preferably at least 95%, even more preferably at least 96%, 97%, 98%, or 99% identical in amino acid sequence to the amino acid sequence encoded by the germline immunoglobulin gene. Typically, an antibody derived from a particular germline sequence will display no more than 10 amino acid differences, more preferably, no more than 5, or even more preferably, no more than 4, 3, 2, or 1 amino acid difference from the amino acid sequence encoded by the germline immunoglobulin gene.
As used herein, the term "heteroantibodies" refers to two or more antibodies, derivatives thereof, or antigen binding regions linked together, at least two of which have different specificities. These different specificities include a binding specificity for an Fc receptor on an effector cell, and a binding specificity for an antigen or epitope on a target cell, e.g., a tumor cell.
The term "transfectoma", as used herein, includes recombinant eukaryotic host cells expressing an antibody, such as CHO cells, NS/0 cells, HEK293 cells, HEK293T cells, plant cells, or fungi, including yeast cells.
The invention includes all antibodies and derivatives of antibodies as described herein which for the purposes of the invention are encompassed by the term "antibody". The term "antibody derivatives" refers to any modified form of an antibody, e.g., a conjugate of the antibody and another agent or antibody, or an antibody fragment
The term "antibody against a tumor antigen" or similar terms relates to an antibody directed to or having the ability of binding to the tumor antigen. The term "binding" according to the invention preferably relates to a specific binding.
According to the present invention, an antibody or antibody-drug conjugate is capable of binding to a predetermined target if it has a significant affinity for said predetermined target and binds to said predetermined target in standard assays. "Affinity" or "binding affinity" is often measured by equilibrium dissociation constant (KD). Preferably, the term "significant affinity" refers to the binding to a predetermined target with a dissociation constant (KD) of 10-5 M or lower, 10-6 M or lower, 10-7 M or lower, 10-8 M or lower, 10-9 M or lower, 10'10 M or lower, 10-11 M or lower, or 10-12 M or lower. An antibody or antibody-drug conjugate is not (substantially) capable of binding to a target if it has no significant affinity for said target and does not bind significantly, in particular does not bind detectably, to said target in standard assays. Preferably, the antibody or antibody- drug conjugate does not detectably bind to said target if present in a concentration of up to 2, preferably 10, more preferably 20, in particular 50 or 100 μ^πιΐ or higher. Preferably, an antibody or antibody-drug conjugate has no significant affinity for a target if it binds to said target with a Ko that is at least 10-fold, 100-fold, ltf-fold, ltf-fold, lO^fold, or 106-fold higher than the Ko for binding to the predetermined target to which the antibody or antibody- drug conjugate is capable of binding. For example, if the KD for binding of an antibody or antibody-drug conjugate to the target to which the antibody or antibody-drug conjugate is capable of binding is 10-7 M, the KD for binding to a target for which the antibody or antibody-drug conjugate has no significant affinity would be is at least 10-6 M, 10~s M, 10"* M, 10'3 M, lO-2 M, or 10 1 M.
An antibody or antibody-drug conjugate is specific for a predetermined target if it is capable of binding to said predetermined target while it is not capable of binding to other targets, i.e. has no significant affinity for other targets and does not significantly bind to other targets in standard assays. According to the invention, an antibody or antibody-drug conjugate is specific for a tumor antigen such as CLDN18.2 if it is capable of binding to the tumor antigen but is not (substantially) capable of binding to other targets. Preferably, an antibody or antibody-drug conjugate is specific for a tumor antigen if the affinity for and the binding to such other targets does not significantly exceed the affinity for or binding to tumor antigen- unrelated proteins such as bovine serum albumin (BSA), casein, human serum albumin (HSA) or non-tumor antigen transmembrane proteins such as MHC molecules or transferrin receptor or any other specified polypeptide. Preferably, an antibody or antibody-drug conjugate is specific for a pr^etermined target if it binds to said target with a KD that is at least 10-fold, 100-fold, lO^fold, ltf-fold, 10-5-fold, or 106-fold lower than the KD for binding to a target for which it is not specific. For example, if the KD for binding of an antibody or antibody-drug conjugate to the target for which it is specific is 10'7 M, the KD for binding to a target for which it is not specific would be at least 10-6 M, 10 -5 M, 10-4 M, 10-3 M, 10-2 M, or 10 1 M.
Binding of an antibody to a target can be determined experimentally using any suitable method; see, for example, Berzofsky et al., "Antibody-Antigen Interactions" In Fundamental Immunology, Paul, W. E., Ed., Raven Press New York, N Y (1984), Kuby, Janis Immunology, W. H. Freeman and Company New York, N Y (1992), and methods described herein. Affinities may be readily determined using conventional techniques, such as by equilibrium dialysis; by using the BIAcore 2000 instrument, using general procedures outlined by the manufacturer; by radioimmunoassay using radiolabeled target antigen; or by another method known to the skilled artisan. The affinity data may be analyzed, for example, by the method of Scatchard et al., Ann N.Y. Acad. ScL, 51:660 (1949). The measured affinity of a particular antibody-antigen interaction can vary if measured under different conditions, e.g., salt concentration, pH. Thus, measurements of affinity and other antigen-binding parameters, e.g., KD, ICSO, are preferably made with standardized solutions of antibody and antigen, and a standardized buffer.
The term "naturally occurring'1 as used herein as applied to an object refers to the fact that an object can be found in nature. For example, a polypeptide or polynucleotide sequence that is present in an organism (including viruses) that can be isolated from a source in nature and which has not been intentionally modified by man in the laboratory is naturally occurring.
The term "rearranged11 as used herein refers to a configuration of a heavy chain or light chain immunoglobulin locus wherein a V segment is positioned immediately adjacent to a D-J or J segment in a conformation encoding essentially a complete VH or VL domain, respectively. A rearranged immunoglobulin (antibody) gene locus can be identified by comparison to germline DNA; a rearranged locus will have at least one recombined heptamer/nonamer homology element
The term "unrearranged" or "germline configuration" as used herein in reference to a V segment refers to the configuration wherein the V segment is not recombined so as to be immediately adjacent to a D or J segment.
According to the invention an antibody having the ability of binding to CLDN18.2 is an antibody capable of binding to an epitope present in CLDN18.2, preferably an epitope located within the extracellular domains of CLDN18.2, in particular the first extracellular domain, preferably amino acid positions 29 to 78 of CLDN18.2. In particular embodiments, an antibody having the ability of binding to CLDN18.2 is an antibody capable of binding to (i) an epitope on CLDN18.2 which is not present on CLDN18.1, preferably SEQ ID NO: 3, 4, and S, (ii) an epitope localized on the CLDN18.2-loopl, preferably SEQ ID NO: 8, (iii) an epitope localized on the CLDN18.2-loop2, preferably SEQ ID NO: 10, (iv) an epitope localized on the CLDN18.2-loopD3, preferably SEQ ID NO: 11, (v) an epitope, which encompass CLDN18.2-loopl and CLDN18.2-loopD3, or (vi) a non-glycosylated epitope localized on the CLDN18.2-loopD3, preferably SEQ ID NO: 9.
According to the invention an antibody having the ability of binding to CLDN18.2 preferably is an antibody having the ability of binding to CLDN18.2 but not to CLDN18.1. Preferably, an antibody having the ability of binding to CLDN18.2 is specific for CLDN18.2. Preferably, an antibody having the ability of binding to CLDN18.2 preferably is an antibody having the ability of binding to CLDN18.2 expressed on the cell surface. In particular preferred embodiments, an antibody having the ability of binding to CLDN18.2 binds to native epitopes of CLDN18.2 present on the surface of living cells. Preferably, an antibody having the ability of binding to CLDN18.2 binds to one or more peptides selected from the group consisting of SEQ ID NOs: 1, 3-11, 44, 46, and 48-50. Preferably, an antibody having the ability of binding to CLDN18.2 is specific for the afore mentioned proteins, peptides or immunogenic fragments or derivatives thereof. An antibody having the ability of binding to CLDN18.2 may be obtained by a method comprising the step of immunizing an animal with a protein or peptide comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 1, 3-11, 44, 46, and 48-50, or a nucleic acid or host cell expressing said protein or peptide. Preferably, the antibody binds to cancer cells, in particular cells of the cancer types mentioned above and, preferably, does not bind substantially to non-cancerous cells.
In a particularly preferred embodiment, an antibody having the ability of binding to CLDN18.2 is produced by a hybridoma deposited at the DSMZ (Mascheroder Weg lb, 31824 Braunschweig, Germany, new address: Inhoffenstr. 7B, 31824 Braunschweig, Germany) and having the following designation and accession number:
a. 182-D1106-055, accession no. DSM ACC2737, deposited on October 19, 2005
b. 182-D 1106-056, accession no. DSM ACC2738, deposited on October 19, 2005
c. 182-D1106-057, accession no. DSM ACC2739, deposited on October 19, 2005
d. 182-D1106-058, accession no. DSM ACC2740, deposited on October 19, 2005
e. 182-D1106-059, accession no. DSM ACC2741, deposited on October 19, 2005
f. 182-D1106-062, accession no. DSM ACC2742, deposited on October 19, 2005, g. 182-D1106-067, accession no. DSM ACC2743, deposited on October 19, 2005 h. 182-D758-035, accession no. DSM ACC2745, deposited on Nov. 17, 2005 i. 182-D758-036, accession no. DSM ACC2746, deposited on Nov. 17, 2005
j. 182-D758-040, accession no. DSM ACC2747, deposited on Nov. 17, 2005
k. 182-D1106-061, accession no. DSM ACC2748, deposited on Nov. 17, 2005
1. 182-D1106-279, accession no. DSM ACC2808, deposited on Oct. 26, 2006
m. 182-D1106-294, accession no. DSM ACC2809, deposited on Oct. 26, 2006,
n. 182-D1106-362, accession no. DSM ACC2810, deposited on Oct 26, 2006.
Preferred antibodies according to the invention are those produced by and obtainable from the above-described hybridomas; i.e. 37G11 in the case of 182-D1106-055, 37H8 in the case of 182-D 1106-056, 38G5 in the case of 182-D 1106-057, 38H3 in the case of 182-D 1106-058, 39F11 in the case of 182-D1106-059, 43A11 in the case of 182-D 1106-062, 61C2 in the case of 182-D1106-067, 26B5 in the case of 182-D758-035, 26D12 in the case of 182-D758-036, 28D10 in the case of 182-D758-040, 42E12 in the case of 182-D 1106-061, 125E1 in the case of 182-D1106-279, 163E12 in the case of 182-D1106-294, and 175D10 in the case of 182- Dl 106-362; and the chimerized and humanized forms thereof.
In one embodiment, an antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i), and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i). Preferred antibodies, in particular chimerized antibodies and their sequences are shown in the following table.
chimerized
clone mAb Isotype variable region antibody
heavy
chain 43A11 182-D1106-062 IgG2a SEQIDNO:29 SEQIDNO:14
163E12 182-D1106-294 IgG3 SEQIDNO:30 SEQ ID NO: 15
125E1 182-D1106-279 IgG2a SEQIDNO:31 SEQIDNO:16
166E2 182-D1106-308 IgG3 SEQIDNO:33 SEQIDNO:18
175D10 182-D1106-362 IgGl SEQIDNO:32 SEQIDNO:17
45C1 182-D758-187 IgG2a SEQIDNO:34 SEQIDNO:19
light
chain 43A11 182-D1106-062 IgK SEQIDNO:36 SEQIDNO:21
163E12 182-D1106-294 IgK SEQIDNO:35 SEQIDNO:20
125E1 182-D1106-279 IgK SEQIDNO:37 SEQIDNO:22
166E2 182-D1106-308 IgK SEQIDNO:40 SEQIDNO:25
175D10 182-D1106-362 IgK SEQIDNO:39 SEQIDNO:24
45C1 182-D758-187 IgK SEQIDNO:38 SEQIDNO:23
45C1 182-D758-187 IgK SEQIDNO:41 SEQIDNO:26
45C1 182-D758-187 IgK SEQE>NO:42 SEQIDNO:27
45C1 182-D758-187 IgK SEQE>NO:43 SEQIDNO:28
Figure imgf000042_0001
In preferred embodiments, antibodies, in particular chimerised forms of antibodies according to the invention include antibodies comprising a heavy chain constant region (CH) comprising an amino acid sequence derived from a human heavy chain constant region such as the amino acid sequence represented by SEQ ID NO: 13 or a fragment thereof. In further preferred embodiments, antibodies, in particular chimerised forms of antibodies according to the invention include antibodies comprising a light chain constant region (CL) comprising an amino acid sequence derived from a human light chain constant region such as the amino acid sequence represented by SEQ ID NO: 12 or a fragment thereof. In a particular preferred embodiment, antibodies, in particular chimerised forms of antibodies according to the invention include antibodies which comprise a CH comprising an amino acid sequence derived from a human CH such as the amino acid sequence represented by SEQ ID NO: 13 or a fragment thereof and which comprise a CL comprising an amino acid sequence derived from a human CL such as the amino acid sequence represented by SEQ ID NO: 12 or a fragment thereof.
In one embodiment, an antibody having the ability of binding to CLDN18.2 is a chimeric mouse/human IgGl monoclonal antibody comprising kappa, murine variable light chain, human kappa light chain constant region allotype Km(3), murine heavy chain variable region, human IgGl constant region, allotype Glm(3).
In certain preferred embodiments, chimerised forms of antibodies include antibodies comprising a heavy chain comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 14, IS, 16, 17, 18, 19, 51, and a fragment thereof and/or comprising a light chain comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 20, 21, 22, 23, 24, 25, 26, 27, 28, and a fragment thereof.
In certain preferred embodiments, chimerised forms of antibodies include antibodies comprising a combination of heavy chains and light chains selected from the following possibilities (i) to (ix):
(i) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 14 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 21 or a fragment thereof,
(ii) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 15 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 20 or a fragment thereof,
(Hi) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 16 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 22 or a fragment thereof,
(iv) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 18 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 25 or a fragment thereof,
(v) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 17 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof, (vi) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 23 or a fragment thereof,
(vii) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 26 or a fragment thereof,
(viii) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 27 or a fragment thereof;
(ix) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: 19 or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 28 or a fragment thereof, and
(x) the heavy chain comprises an amino acid sequence represented by SEQ ID NO: SI or a fragment thereof and the light chain comprises an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof.
The antibodies according to (ii), (v) or (x) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2". The antibody according to (v) or (x) is particularly preferred.
"Fragment" or "fragment of an amino acid sequence" as used above relates to a part of an antibody sequence, i.e. a sequence which represents the antibody sequence shortened at the N- and/or C-terminus, which when it replaces said antibody sequence in an antibody retains binding of said antibody to CLDN18.2. Preferably, a fragment of an amino acid sequence comprises at least 80%, preferably at least 90%, 95%, 96%, 97%, 98%, or 99% of the amino acid residues from said amino acid sequence. A fragment of an amino acid sequence selected from the group consisting of SEQ ID NOs: 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28 and 51 preferably relates to said sequence wherein 17, 18, 19, 20, 21, 22 or 23 amino acids at the N-terminus are removed.
In a preferred embodiment, an antibody having the ability of binding to CLDN18.2 comprises a heavy chain variable region (VH) comprising an amino acid sequence selected from the group consisting of SEQ ID NOs: 29, 30, 31, 32, 33, 34, and a fragment thereof. In a preferred embodiment, an antibody having the ability of binding to CLDN18.2 comprises a light chain variable region (VL) comprising an amino acid sequence selected mom the group consisting of SEQ ID NO: 35, 36, 37, 38, 39, 40, 41, 42, 43, and a fragment thereof.
In certain preferred embodiments, an antibody having the ability of binding to CLDN18.2 comprises a combination of heavy chain variable region (VH) and light chain variable region (VL) selected from the following possibilities (i) to (ix):
(i) the VH comprises an amino acid sequence represented by SEQ ID NO: 29 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 36 or a fragment thereof,
(ii) the VH comprises an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof,
(iii) the VH comprises an amino acid sequence represented by SEQ ID NO: 31 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 37 or a fragment thereof,
(iv) the VH comprises an amino acid sequence represented by SEQ ID NO: 33 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 40 or a fragment thereof,
(v) the VH comprises an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof,
(vi) the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 38 or a fragment thereof,
(vii) the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 41 or a fragment thereof,
(viii) the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 42 or a fragment thereof,
(ix) the VH comprises an amino acid sequence represented by SEQ ID NO: 34 or a fragment thereof and the VL comprises an amino acid sequence represented by SEQ ID NO: 43 or a fragment thereof. The antibodies according to (ii) or (v) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2". The antibody according to (v) is particularly preferred.
According to the invention, the term "fragment" refers, in particular, to one or more of the complementarity-determining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable region (VH) and/or of the light chain variable region (VL). In one embodiment said one or more of the complementarity-determining regions (CDRs) are selected from a set of complementarity-determining regions CDR1, CDR2 and CDR3. In a particularly preferred embodiment, the term "fragment" refers to the complementarity- determining regions CDR1, CDR2 and CDR3 of the heavy chain variable region (VH) and/or of the light chain variable region (VL).
In a preferred embodiment, an antibody having the ability of binding to CLDN18.2 comprises a VH comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (vi):
(i) CDR1: positions 45-52 of SEQ ID NO: 14, CDR2: positions 70-77 of SEQ ID NO: 14, CDR3: positions 116-125 of SEQ ID NO: 14,
(ii) CDR1: positions 45-52 of SEQ ID NO: 15, CDR2: positions 70-77 of SEQ ID NO: 15, CDR3: positions 116-126 of SEQ ID NO: 15,
(iii) CDR1: positions 45-52 of SEQ ID NO: 16, CDR2: positions 70-77 of SEQ ID NO: 16, CDR3: positions 116-124 of SEQ ID NO: 16,
(iv) CDR1: positions 45-52 of SEQ ID NO: 17, CDR2: positions 70-77 of SEQ ID NO: 17, CDR3: positions 116-126 of SEQ ID NO: 17,
(v) CDR1: positions 44-51 of SEQ ID NO: 18, CDR2: positions 69-76 of SEQ ID NO: 18, CDR3: positions 115-125 of SEQ ID NO: 18, and
(vi) CDR1: positions 45-53 of SEQ ID NO: 19, CDR2: positions 71-78 of SEQ ID NO: 19, CDR3: positions 117-128 of SEQ ID NO: 19.
In a preferred embodiment, an antibody having the ability of binding to CLDN18.2 comprises a VL comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (ix):
(i) CDR1: positions 47-58 of SEQ ID NO: 20, CDR2: positions 76-78 of SEQ ID NO: 20, CDR3: positions 115-123 of SEQ ID NO: 20, (ii) CDR1: positions 49-53 of SEQ ID NO: 21, CDR2: positions 71-73 of SEQ ID NO: 21, CDR3: positions 110-118 of SEQ ED NO: 21,
(iii) CDR1: positions 47-52 of SEQ ED NO: 22, CDR2: positions 70-72 of SEQ ED NO: 22, CDR3: positions 109-117 of SEQ ED NO: 22,
(iv) CDR1: positions 47-58 of SEQ ED NO: 23, CDR2: positions 76-78 of SEQ ED NO: 23, CDR3: positions 115-123 of SEQ ED NO: 23,
(v) CDR1: positions 47-58 of SEQ ED NO: 24, CDR2: positions 76-78 of SEQ ED NO: 24, CDR3: positions 115-123 of SEQ ED NO: 24,
(vi) CDR1: positions 47-58 of SEQ ED NO: 25, CDR2: positions 76-78 of SEQ ED NO: 25, CDR3: positions 115-122 of SEQ ED NO: 25,
(vii) CDR1: positions 47-58 of SEQ ED NO: 26, CDR2: positions 76-78 of SEQ ED NO: 26, CDR3: positions 115-123 of SEQ ED NO: 26,
(viii) CDR1: positions 47-58 of SEQ ED NO: 27, CDR2: positions 76-78 of SEQ ED NO: 27, CDR3: positions 115-123 of SEQ ED NO: 27, and
(ix) CDR1: positions 47-52 of SEQ ED NO: 28, CDR2: positions 70-72 of SEQ ED NO: 28, CDR3: positions 109-117 of SEQ ED NO: 28.
In a preferred embodiment, an antibody having the ability of binding to CLDN18.2 comprises a combination of VH and VL each comprising a set of complementarity-determining regions CDR1, CDR2 and CDR3 selected from the following embodiments (i) to (ix):
(i) VH: CDR1: positions 45-52 of SEQ ED NO: 14, CDR2: positions 70-77 of SEQ ED NO:
14, CDR3: positions 116-125 of SEQ ED NO: 14, VL: CDR1: positions 49-53 of SEQ ED NO:
21, CDR2: positions 71-73 of SEQ ED NO: 21, CDR3: positions 110-118 of SEQ ED NO: 21,
(ii) VH: CDR1: positions 45-52 of SEQ ED NO: 15, CDR2: positions 70-77 of SEQ ED NO:
15, CDR3: positions 116-126 of SEQ ED NO: 15, VL: CDR1: positions 47-58 of SEQ ED NO: 20, CDR2: positions 76-78 of SEQ ED NO: 20, CDR3: positions 115-123 of SEQ ED NO: 20,
(iii) VH: CDR1: positions 45-52 of SEQ ED NO: 16, CDR2: positions 70-77 of SEQ ED NO:
16, CDR3: positions 116-124 of SEQ ED NO: 16, VL: CDR1: positions 47-52 of SEQ ED NO:
22, CDR2: positions 70-72 of SEQ ED NO: 22, CDR3: positions 109-117 of SEQ ED NO: 22,
(iv) VH: CDR1: positions 44-51 of SEQ ED NO: 18, CDR2: positions 69-76 of SEQ ED NO: 18, CDR3: positions 115-125 of SEQ ED NO: 18, VL: CDR1: positions 47-58 of SEQ ED NO: 25, CDR2: positions 76-78 of SEQ ED NO: 25, CDR3: positions 115-122 of SEQ ED NO: 25, (v) VH: CDR1: positions 45-52 of SEQ ID NO: 17, CDR2: positions 70-77 of SEQ ID NO: 17, CDR3: positions 116-126 of SEQ ID NO: 17, VL: CDR1: positions 47-58 of SEQ ID NO: 24, CDR2: positions 76-78 of SEQ ID NO: 24, CDR3: positions 115-123 of SEQ ID NO: 24,
(vi) VH: CDRl: positions 45-53 of SEQ ID NO: 19, CDR2: positions 71-78 of SEQ ID NO: 19, CDR3: positions 117-128 of SEQ ID NO: 19, VL: CDRl: positions 47-58 of SEQ ID NO: 23, CDR2: positions 76-78 of SEQ ID NO: 23, CDR3: positions 115-123 of SEQ ID NO: 23,
(vii) VH: CDRl: positions 45-53 of SEQ ID NO: 19, CDR2: positions 71-78 of SEQ ID NO: 19, CDR3: positions 117-128 of SEQ ID NO: 19, VL: CDRl: positions 47-58 of SEQ ID NO:
26, CDR2: positions 76-78 of SEQ ID NO: 26, CDR3: positions 115-123 of SEQ ID NO: 26,
(viii) VH: CDRl: positions 45-53 of SEQ ID NO: 19, CDR2: positions 71-78 of SEQ ID NO: 19, CDR3: positions 117-128 of SEQ ID NO: 19, VL: CDRl: positions 47-58 of SEQ ID NO:
27, CDR2: positions 76-78 of SEQ ID NO: 27, CDR3: positions 115-123 of SEQ ID NO: 27, and
(ix) VH: CDRl: positions 45-53 of SEQ ID NO: 19, CDR2: positions 71-78 of SEQ ID NO: 19, CDR3: positions 117-128 of SEQ ID NO: 19, VL: CDRl: positions 47-52 of SEQ ID NO:
28, CDR2: positions 70-72 of SEQ ID NO: 28, CDR3: positions 109-117 of SEQ ID NO: 28.
The antibodies according to (ii) or (v) are preferred embodiments of an "antibody having the ability of binding to CLDN18.2". The antibody according to (v) is particularly preferred.
In further preferred embodiments, an antibody having the ability of binding to CLDN18.2 preferably comprises one or more of the complementarity-determining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable region (VH) and/or of the light chain variable region (VL) of a monoclonal antibody against CLDN18.2, preferably of a monoclonal antibody against CLDN18.2 described herein, and preferably comprises one or more of the complementarity-deterinining regions (CDRs), preferably at least the CDR3 variable region, of the heavy chain variable regions (VH) and/or light chain variable regions (VL) described herein. In one embodiment said one or more of the complementarity-determining regions (CDRs) are selected from a set of complementarity- determining regions CDRl, CDR2 and CDR3 described herein. In a particularly preferred embodiment, an antibody having the ability of binding to CLDN18.2 preferably comprises the complementarity-detennining regions CDRl, CDR2 and CDR3 of the heavy chain variable region (VH) and/or of the light chain variable region (VL) of a monoclonal antibody against CLDN18.2, preferably of a monoclonal antibody against CLDN18.2 described herein, and preferably comprises the cxtmplementarity-determining regions CDR1, CDR2 and CDR3 of the heavy chain variable regions (VH) and/or light chain variable regions (VL) described herein.
In one embodiment an antibody comprising one or more CDRs, a set of CDRs or a combination of sets of CDRs as described herein comprises said CDRs together with their intervening framework regions. Preferably, the portion will also include at least about 50% of either or both of the first and fourth framework regions, the 50% being the C-terminal 50% of the first framework region and the N-terminal 50% of the fourth framework region. Construction of antibodies made by recombinant DNA techniques may result in the introduction of residues N- or C-terminal to the variable regions encoded by linkers introduced to facilitate cloning or other manipulation steps, including the introduction of linkers to join variable regions of the invention to farmer protein sequences including immunoglobulin heavy chains, other variable domains (for example in the production of diabodies) or protein labels.
In one embodiment an antibody comprising one or more CDRs, a set of CDRs or a combination of sets of CDRs as described herein comprises said CDRs in a human antibody framework.
Reference herein to an antibody comprising with respect to the heavy chain thereof a particular chain, or a particular region or sequence preferably relates to the situation wherein all heavy chains of said antibody comprise said particular chain, region or sequence. This applies correspondingly to the light chain of an antibody.
In one embodiment, an antibody having the ability of binding to CLDN18.2 according to the invention relates to an antibody which recognizes, i.e. binds to, the same or essentially the same epitope as a CLDN18.2-binding antibody described herein, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
According to the invention, an antibody having the ability of binding to CLDN18.2, in particular when present in the antibody-drug conjugate, preferably has an affinity and/or specificity for CLDN18.2 appropriate to allow endocytosis of the antibody and/or the antibody-drug conjugate. The term "endocytosis" refers to the process where eukaryotic cells internalize segments of plasma membrane, cell-surface receptors and components from the extracellular fluid. Endocytosis mechanisms include receptor mediated endocytosis. The term "receptor-mediated endocytosis" refers to a biological mechanism by which a ligand, upon binding to its target, triggers membrane invagination and pinching, gets internalized and delivered into cytosol or transferred to appropriate intracellular compartments.
The present invention also envisions embodiments, wherein an "antibody having the ability of binding to CLDN18.2" has a meaning which encompasses any "binding agent to CLDN18.2". According to the invention, a "binding agent to CLDN18.2" includes any compound that has a binding capacity to CLDN18.2. Preferably, such binding agent comprises at least one binding domain for CLDN18.2. The term includes all artificial binding molecules (scaffolds) having a binding capacity to CLDN18.2 including but not limited to nanobodies, affibodies, anticalins, DARPins, monobodies, avimers, and microbodies. In one embodiment said binding agent binds to an extracellular domain of CLDN18.2. In one embodiment said binding agent binds to native epitopes of CLDN18.2 present on the surface of living cells. In one embodiment said binding agent binds to the first extracellular loop of CLDN18.2. In one embodiment said binding to CLDN18.2 is a specific binding.
The term "binding domain" characterizes in connection with the present invention a structure, e.g. of an antibody, which binds to/interacts with a given target structure/antigen/epitope. Thus, the binding domain according to the invention designates an "antigen-interaction-site".
Any agent that exerts a therapeutic effect on cancer cells can be used as the drug for conjugation to an anti-CLDN18.2 antibody or derivative thereof. Preferably, conjugation of the drug does not alter or significantly alter the binding characteristics, in particular the specificity, of the antibody, as discussed herein. Thus, the antibody-drug conjugate according to the invention preferably has the same or essentially the same binding characteristics, in particular the specificity, as the antibody used for conjugation. Accordingly, if certain binding characteristics are described herein for the antibody used for conjugation, it is preferred that also the antibody-drug conjugate has such binding characteristics. For example, if it is described that the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2 and/or binds to the first extracellular loop of CLDN18.2, it is preferred that also the antibody-drug conjugate binds to an extracellular domain of CLDN18.2 and/or binds to the first extracellular loop of CLDN18.2.
Typically, the drug is a cytotoxic or cytostatic agent. A cytotoxin or cytotoxic agent includes any agent that is detrimental to and, in particular, kills cells.
Useful classes of cytotoxic agents include, for example, antitubulin agents, DNA minor groove binders (e.g., enediynes and lexitropsins), DNA replication inhibitors, alkylating agents (e.g., platinum complexes such as cis-platin, mono(platinum), bis(platinum) and tri- nuclear platinum complexes and carboplatin), anthracyclines, antibiotics, antifolates, antimetabolites, chemotherapy sensitizers, duocarmycins, etoposides, fluorinated pyrimidines, ionophores, nitrosoureas, platinols, pre-forming compounds, purine antimetabolites, puromycins, radiation sensitizers, steroids, taxanes (e.g., paclitaxel and docetaxel), topoisomerase inhibitors, vinca alkaloids, or the like.
Individual cytotoxic agents include, for example, an androgen, anthramycin (AMC), asparaginase, 5-azacytidine, azathioprine, bleomycin, busulfan, buthionine sulfoximine, camptothecin, carboplatin, carmustine (BSNU), CC-1065, chlorambucil, cisplatin, colchicine, cyclophosphamide, cytarabine, cytidine arabinoside, cytochalasin B, dacarbazine, dactinomycin (formerly actinomycin), daunorubicin, decarbazine, docetaxel, doxorubicin, an estrogen, S-fluordeoxyuridine, 5-fluorouracil, gramicidin D, hydroxyurea, idarubicin, ifosfamide, irinotecan, lomustine (CCNU), mecMorethamine, melphalan, 6-mercaptopurine, methotrexate, mithramycin, mitomycin C, mitoxantrone, nitroimidazole, paclitaxel, plicamycin, procarbizine, streptozotocin, tenoposide, 6-thioguanine, thioTEPA, topotecan, vinblastine, vincristine, vinorelbine, VP- 16 and VM-26.
Examples of anti-tubulin agents include, but are not limited to, dolastatins (e.g., auristatin E, AFP, MMAF, MMAE, AEB, AEVB), maytansinoids, taxanes (e.g., paclitaxel, docetaxel), T67 (Tularik), vinca alkyloids (e.g., vincristine, vinblastine, vindesine, and vinorelbine), baccatin derivatives, taxane analogs (e.g., epothilone A and B), nocodazole, colchicine and colcimid, estramustine, cryptophysins, cemadotin, combretastatins, discodermolide, and eleutherobin. In specific embodiments, the cytotoxic or cytostatic agent is auristatin E (also known in the art as dolastatin-10) or a derivative thereof. Typically, the auristatin E derivative is, e.g., an ester formed between auristatin E and a keto acid. For example, auristatin E can be reacted with paraacetyl benzoic acid or benzoylvaleric acid to produce AEB and AEVB, respectively. Other typical auristatin derivatives include AFP, MMAF, and MMAE.
In certain embodiments, the cytotoxic or cytostatic agent is a maytansinoid, another group of anti-tubulin agents. For example, in specific embodiments, the maytansinoid is maytansine, DM-1 orDM-4.
Maytansinoids are potent microtubule-targeted compounds that inhibit proliferation of cells at mitosis. Maytansinoids are derivatives of maytansine which is a 19-membered ansa macrolide structure attached to a chlorinated benzene ring. Maytansine has the following formula:
Figure imgf000052_0001
It was discovered that certain microbes also produce maytansinoids, such as maytansinol and C-3 maytansinol esters (U.S. Pat No. 4,151,042). Synthetic maytansinol and maytansinol analogues have been reported, for example, in U.S. Pat. Nos. 4,137,230; 4,248,870; 4,256,746; 4,260,608; 4,265,814; 4,294,757; 4,307,016; 4,308,268; 4,308,269; 4,309,428; 4,313,946; 4,315,929; 4,317,821; 4,322,348; 4,331,598; 4,361,650; 4,364,866; 4,424,219; 4,362,663; and 4,371,533, and Kawai et al (1984) Chem. Pharm. Bull. 3441-3451, herein incorporated by reference.
Maytansinoids are well known in the art and can be synthesized by known techniques or isolated from natural sources. Particularly preferred maytansinoids according to the invention are the thiol-containing derivatives of maytansine, such as DM1 and DM4. Such thiol- containing derivatives of maytansine include compounds wherein the methyl group bound to the carbonyl group is replaced by a group containg a tree sulfhydryl group such as the group - R-SH where R represents an alkylene group or other carbon-containing group of atoms.
DM1, also known as mertansine, is a maytansinoid having the following formula:
Figure imgf000053_0001
In particular, the term "mertansine" or "DM1" refers to the compound N^-deacetyl-N2'-^- mercapto- 1 -oxopropyl)-maytansine.
"DM4" refers to the compound -deacetyl-N2 -(4-methyl-4-mercapto- 1 -oxopentyl)- maytansine.
Anti-CLDN18.2 antibody-maytansinoid conjugates may be prepared by chemically linking an anti-CLDN18.2 antibody to a maytansinoid molecule without significantly diminishing the biological activity of either the antibody or the maytansinoid molecule. An average of 3-4 maytansinoid molecules may be conjugated per antibody molecule, although even one molecule of toxin/antibody is expected to enhance cytotoxicity over the use of naked antibody.
In this respect, the term "antibody covalently attached to at least one toxin drug moiety" includes situations where one or more molecules of the same drug are covalently attached to an antibody molecule as well as where different drugs are covalently attached to an antibody molecule. In the latter situation, one or more molecules of each of the different drugs may be attached to an antibody molecule, or a combination thereof (e.g. one molecule of one drug is attached while several molecules of another drug are attached). In some embodiments of the invention, an antibody is conjugated to dolastatins or dolostatin peptidic analogs and derivatives, the auristatins (US Patent Nos. 5,635,483; 5,780,588, herein incorporated by reference). Auristatins are synthetic analogs of dolostatin 10, a natural product derived from a marine mollusk, Dolabela auricularia. Like the maytansinoids, auristatins are microtubule disrupters. The dolastatin or auri statin drug moiety may be attached to the antibody through the N (amino) terminus or the C (carboxyl) terminus of the peptidic drug moiety.
Exemplary auristatin embodiments include monomethylauri statin drug moieties such as MMAE and MMAF which preferably are N-terminus linked.
MMAE, also known as Monomethyl auristatin E, has the following formula:
Figure imgf000054_0001
In particular, the term "MMAE" refers to the compound (S>N-((3R,4S,5S)-l-((S)-2- (( 1 R,2R)-3-((( 1 S,2R)- 1 -hydroxy- 1 -phenylpropan-2-yl)amino> 1 -methoxy-2-methyl-3 - oxopropyl)pyrrolidin- 1 -yl)-3 -methoxy-5-methyl-l -oxoheptan-4-yl)-N,3 -dimethyl-2-((S)-3 - methyl-2-(methylaniino)butanamido)butanarnide. MMAE is actually desmethyl-auristatin E, i.e., the N-tenninal amino group has only one methyl substituent instead of two as in auristatin E itself.
Particulary preferred according to the invention are antibody-vcAuristatin conjugates such as antibody-vcMMAE conjugates. According to the invention, the term "antibody-vcAuristatin" or "vcMMAE" refers to an antibody-drug conjugate (ADC) comprising an auristatin such as MMAE, linked via a linker comprising the lysosomally cleavable dipeptide, valine-citrulline (vc), to the antibody. MMAF, also known as Monomethyl auri statin F, refers to the compound (S)-2-{(2R,3R)-3- ((S>H(3MS,5S)^(S)-N,3-dmethyl-2-((S)-3-methyl-2-
Figure imgf000055_0001
The generation of antibody-drug conjugates can be accomplished by any technique known to the skilled artisan. Antibody-drug conjugates can be prepared by binding the drug to an antibody in accordance with a conventional technique. An antibody and a drug may be directly bound to each other via their own linker groups or indirectly via a linker or other substance.
A number of different reactions are available for covalent attachment of drugs to antibodies. This is often accomplished by reaction of the amino acid residues of the antibody molecule, including the amine groups of lysine, the free carboxylic acid groups of glutamic and aspartic acid, the sulfhydryl groups of cysteine and the various moieties of the aromatic amino acids. One of the most commonly used non-specific methods of covalent attachment is the carbodiimide reaction to link a carboxy (or amino) group of a compound to amino (or carboxy) groups of the antibody. Additionally, bifunctional agents such as dialdehydes or imidoesters have been used to link the amino group of a compound to amino groups of the antibody molecule. Also available for attachment of drugs to antibodies is the Schiff base reaction. This method involves the periodate oxidation of a drug that contains glycol or hydroxy groups, thus forming an aldehyde which is then reacted with the antibody molecule. Attachment occurs via formation of a Schiff base with amino groups of the antibody molecule. Isothiocyanates can also be used as coupling agents for covalently attaching drugs to antibodies. Other techniques are known to the skilled artisan and within the scope of the present invention.
There are many linking groups known in the art for making antibody-drug conjugates. A linker preferably comprises one or more functional groups that react with either or bom of the antibody and the drug. Examples of functional groups include amino, carboxyl, mercapto, maleimide, and pyridinyl groups.
In one embodiment of the invention, an antibody is linked with a drug via a bifunctional crosslinking reagent. As used herein, a "bifunctional crosslinking reagent" refers to a reagent that possesses two reactive groups one of which is capable of reacting with an antibody, while the other one is capable of reacting with the drug to link the antibody with the drug, thereby forming a conjugate. Any suitable bifunctional crosslinking reagent can be used in connection with the invention, so long as the linker reagent provides for retention of the drug, e.g., cytotoxicity, and targeting characteristics of the antibody. Preferably, the linker molecule joins the drug to the antibody through chemical bonds, such that the drug and the antibody are chemically coupled (e.g., covalently bonded) to each other.
In one embodiment, the bifunctional crosslinking reagent comprises non-cleavable linkers. A non-cleavable linker is any chemical moiety that is capable of linking a drug, such as a maytansinoid, to an antibody in a stable, covalent manner. Preferably, a non-cleavable linker is not cleavable under physiological conditions, in particular inside a cell. Thus, non-cleavable linkers are substantially resistant to acid-induced cleavage, light-induced cleavage, peptidase- induced cleavage, esterase-induced cleavage, and disulfide bond cleavage, at conditions under which the drug or the antibody remains active. Suitable crosslinking reagents mat form non- cleavable linkers between a drug and an antibody are well known in the art In one embodiment, the drug is linked to the antibody through a thioether bond.
In one particularly preferred embodiment, the linking reagent is a cleavable linker. Preferably, a cleavable linker is cleavable under physiological conditions, in particular inside a cell. Examples of suitable cleavable linkers include disulfide linkers, acid labile linkers, photolabile linkers, peptidase labile linkers, and esterase labile linkers.
Examples of linkers include, but are not limited to, N-succinimidyl-3-(2-
Figure imgf000056_0001
pyridylthio)pentanoate (SPP), and N-succinimidyl (4-iodoacetyl)aminobenzoate (SIAB). A peptide linker such as valine-citrulline (Val-Cit) or alanine-phenylalanine (ala-phe) may also be used, and any of the aforementioned linkers may be used in adequate combination.
Disulfide containing linkers are linkers cleavable through disulfide exchange, which can occur under physiological conditions. In yet other embodiments, the linker is cleavable under reducing conditions (e.g., a disulfide linker). A variety of disulfide linkers are known in the art, including, for example, those that can be formed using SATA (N-succinimidyl-5- acetylthioacetate), SPDP (N-succinimidyW-(2-pyridyl(htMo)pro SPDB (N- succinimidyl-3-(2-pyridyl(limio)butyrate) and SMPT (N-succinimidyl-oxycarbonyl-alpha- memyl-alpha-(2-pyridyl-dithio)toluene).
Acid labile linkers are linkers cleavable at acid pH. For example, certain intracellular compartments, such as endoscmes and lysosomes, have an acidic pH (pH 4-5), and provide conditions suitable to cleave acid labile linkers. Acid labile linkers are relatively stable under neutral pH conditions, such as those in the blood, but are unstable at below pH 5.5 or 5.0. For example, a hydrazone, semicarbazone, thiosemicarbazone, cis-aconitic amide, orthoester, acetal, ketal, or the like can be used.
Photolabile linkers are useful at the body surface and in many body cavities that are accessible to light. Furthermore, infrared light can penetrate tissue.
Peptidase labile linkers can be used to cleave certain peptides inside or outside cells. In one embodiment, the cleavable linker is cleaved under mild conditions, i.e., conditions within a cell under which the activity of the cytotoxic agent is not affected.
The linker can be or can comprise, e.g., a peptidyl linker that is cleaved by an intracellular peptidase or protease enzyme, including, but not limited to, a lysosomal or endosomal protease. Typically, the peptidyl linker is at least two amino acids long or at least three amino acids long. Cleaving agents can include cathepsins B and D and plasmin, all of which are known to hydrolyze dipeptide drug derivatives resulting in the release of active drug inside target cells. For example, a peptidyl linker mat is cleavable by the thiol-dependent protease cathepsin-B, which is highly expressed in cancerous tissue, can be used (e.g., a Phe-Leu or a Gly-Phe-Leu-Gly linker). In specific embodiments, the peptidyl linker cleavable by an intracellular protease is a valine- citrulline (V al-Cit; vc) linker or a phenylalanine-lysine (Phe- Lys) linker. One advantage of using intracellular proteolytic release of the therapeutic agent is that the agent is typically attenuated when conjugated and the serum stabilities of the conjugates are typically high.
In one particularly preferred embodiment, the linker according to the invention comprises or consists of the dipeptide valine (Val) - citrulline (Cit) (vc), which is cleaved by cathepsin inside tumour cells.
In one embodiment, the drug is a maytansinoid such as DM4 which is coupled to an antibody having the ability of binding to CLDN18.2 via an amino and sulmydryl reactive heterobifunctional protein crosslinker which reacts with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and with the sulhydryl group of the maytansinoid to yield a reversible disulfide bond. In one embodiment, the amino and sulmydryl reactive heterobifunctional protein crosslinker is SPDB (N-succinimidyl-3 -{2- pyridyldithio)butyrate), which reacts via an N-hydroxysuariniinide (NHS) ester with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and via a pyridinyldisulfide group with the sulhydryl group of DM4 to yield a reversible disulfide bond (Figure 1).
In one embodiment, the drug is an auristatin such as MMAE which is coupled to an antibody having the ability of binding to CLDN18.2 via a peptide linker such as a cathepsin cleavable peptide linker, in particular Val-Cit (vc). In one embodiment, the antibody having the ability of binding to CLDN18.2 is thiolated, e.g. with the heterobifunctional linker 2-ΓΓ (2- iminothiolane) which reacts with free amines of lysine residues.
In one particularly preferred embodiment, an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to DM4 (preferably through its sulmydryl group). In one embodiment, the antibody is coupled to DM4 through a SPDB linker. In one embodiment, an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or SI or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to DM4 (preferably through its sulfhydryl group). In one embodiment, the antibody is coupled to DM4 through a SPDB linker.
In one particularly preferred embodiment, an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to MMAE (preferably through its N-terminal amino group). In one embodiment, the antibody is coupled to MMAE through a linker comprising the dipeptide vc.
In one particularly preferred embodiment, an antibody-drug conjugate according to the invention comprises an antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 17 or SI or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 24 or a fragment thereof or a variant of said amino acid sequence or fragment coupled (preferably through its amino groups) to MMAE (preferably through its N-terminal amino group). In one embodiment, the antibody is coupled to MMAE through a linker comprising the dipeptide vc.
The term "nucleic acid", as used herein, is intended to include DNA and RNA. A nucleic acid may be single-stranded or double-stranded, but preferably is double-stranded DNA.
According to the invention, the term "expression" is used in its most general meaning and comprises the production of RNA or of RNA and protein/peptide. It also comprises partial expression of nucleic acids. Furthermore, expression may be carried out transiently or stably. The teaching given herein with respect to specific amino acid sequences, e.g. those shown in the sequence listing, in particular those referred to herein by indicating a SEQ ID NO:, is to be construed so as to also relate to variants of said specific sequences. Such variant sequences may be functionally equivalent to said specific sequences, e.g. amino acid sequences exhibiting properties identical or similar to those of the specific amino acid sequences. One important property is to retain binding of an antibody to its target. Preferably, a sequence which is a variant with respect to a specific sequence, when it replaces the specific sequence in an antibody retains binding of said antibody to CLDN18.2.
It will be appreciated by those skilled in the art that in particular the sequences of the CDR, hypervariable and variable regions can be modified without losing the ability to bind CLDN18.2. For example, CDR regions will be either identical or highly homologous to the regions of antibodies specified herein. By "highly homologous" it is contemplated that from 1 to S, preferably from 1 to 4, such as 1 to 3 or 1 or 2 substitutions may be made in the CDRs. In addition, the hypervariable and variable regions may be modified so that they show substantial homology with the regions of antibodies specifically disclosed herein.
The term "variant" according to the invention refers, in particular, to mutants, splice variants, conformations, isoforms, allelic variants, species variants and species homologs, in particular those which are naturally present An allelic variant relates to an alteration in the normal sequence of a gene, the significance of which is often unclear. Complete gene sequencing often identifies numerous allelic variants for a given gene. A species homolog is a nucleic acid or amino acid sequence with a different species of origin from that of a given nucleic acid or amino acid sequence. The term "variant" shall encompass any posttranslationally modified variants and conformation variants.
For the purposes of the present invention, "variants" of an amino acid sequence comprise amino acid insertion variants, amino acid addition variants, amino acid deletion variants and/or amino acid substitution variants. Amino acid deletion variants that comprise the deletion at the N-terminal and/or C-terminal end of the protein are also called N-terminal and/or C-terminal truncation variants.
Amino acid insertion variants comprise insertions of single or two or more amino acids in a particular amino acid sequence. In the case of amino acid sequence variants having an insertion, one or more amino acid residues are inserted into a particular site in an amino acid sequence, although random insertion with appropriate screening of the resulting product is also possible.
Amino acid addition variants comprise amino- and/or carboxy-terminal fusions of one or more amino acids, such as 1, 2, 3, 5, 10, 20, 30, SO, or more amino acids.
Amino acid deletion variants are characterized by the removal of one or more amino acids from the sequence, such as by removal of 1, 2, 3, S, 10, 20, 30, SO, or more amino acids. The deletions may be in any position of the protein.
Amino acid substitution variants are characterized by at least one residue in the sequence being removed and another residue being inserted in its place. Preference is given to the modifications being in positions in the amino acid sequence which are not conserved between homologous proteins or peptides and/or to replacing amino acids with other ones having similar properties. Preferably, amino acid changes in protein variants are conservative amino acid changes, i.e., substitutions of similarly charged or uncharged amino acids. A conservative amino acid change involves substitution of one of a family of amino acids which are related in their side chains. Naturally occurring amino acids are generally divided into four families: acidic (aspartate, glutamate), basic (lysine, arginine, histidine), non-polar (alanine, valine, leucine, isoleucine, proline, phenylalanine, methionine, tryptophan), and uncharged polar (glycine, asparagine, glutamine, cysteine, serine, threonine, tyrosine) amino acids. Phenylalanine, tryptophan, and tyrosine are sometimes classified jointly as aromatic amino acids.
Preferably the degree of similarity, preferably identity between a given amino acid sequence, such as an amino acid sequence referred to herein by indicating a SEQ ID NO:, and an amino acid sequence which is a variant of said given amino acid sequence will be at least about 60%, 65%, 70%, 80%, 81%, 82%, 83%, 84%, 85%, 86%, 87%, 88%, 89%, 90%, 91%, 92%, 93%, 94%, 95%, 96%, 97%, 98%, or 99%. The degree of similarity or identity is given preferably for an amino acid region which is at least about 10%, at least about 20%, at least about 30%, at least about 40%, at least about 50%, at least about 60%, at least about 70%, at least about 80%, at least about 90% or about 100% of the entire length of the reference amino acid sequence. For example, if the reference amino acid sequence consists of 200 amino acids, the degree of similarity or identity is given preferably for at least about 20, at least about 40, at least about 60, at least about 80, at least about 100, at least about 120, at least about 140, at least about 160, at least about 180, or about 200 amino acids, preferably continuous amino acids. In preferred embodiments, the degree of similarity or identity is given for the entire length of the reference amino acid sequence. The alignment for determining sequence similarity, preferably sequence identity can be done with art known tools, preferably using the best sequence alignment, for example, using Align, using standard settings, preferably EMBOSS::needle, Matrix: Blosum62, Gap Open 10.0, Gap Extend 0.5.
"Sequence similarity" indicates the percentage of amino acids that either are identical or that represent conservative amino acid substitutions. "Sequence identity" between two amino acid sequences indicates the percentage of amino acids mat are identical between the sequences.
The term "percentage identity" is intended to denote a percentage of amino acid residues which are identical between the two sequences to be compared, obtained after the best alignment, this percentage being purely statistical and the differences between the two sequences being distributed randomly and over their entire length. Sequence comparisons between two amino acid sequences are conventionally carried out by comparing these sequences after having aligned them optimally, said comparison being carried out by segment or by "window of comparison" in order to identify and compare local regions of sequence similarity. The optimal alignment of the sequences for comparison may be produced, besides manually, by means of the local homology algorithm of Smith and Waterman, 1981, Ads App. Math. 2, 482, by means of the local homology algorithm of Neddleman and Wunsch, 1970, J. Mol. Biol. 48, 443, by means of the similarity search method of Pearson and Lipman, 1988, Proc. Natl Acad. Sci. USA 85, 2444, or by means of computer programs which use these algorithms (GAP, BESTF1T, FASTA, BLAST P, BLAST N and TFASTA in Wisconsin Genetics Software Package, Genetics Computer Group, 575 Science Drive, Madison, Wis.).
The percentage identity is calculated by determining the number of identical positions between the two sequences being compared, dividing this number by the number of positions compared and multiplying the result obtained by 100 so as to obtain the percentage identity between these two sequences. The term "transgenic animal" refers to an animal having a genome comprising one or more transgenes, preferably heavy and/or light chain trans genes, or transchromosomes (either integrated or non-integrated into the animal's natural genomic DNA) and which is preferably capable of expressing the transgenes. For example, a transgenic mouse can have a human light chain transgene and either a human heavy chain transgene or human heavy chain transchromosome, such that the mouse produces human anti-CLDN18.2 antibodies when immunized with CLDN18.2 antigen and/or cells expressing CLDN18.2. The human heavy chain transgene can be integrated into the chromosomal DNA of the mouse, as is the case for transgenic mice, e.g., HuMAb mice, such as HCo7 or HCol2 mice, or the human heavy chain transgene can be maintained extrachromosomally, as is the case for transchromosomal (e.g., KM) mice as described in WO 02/43478. Such transgenic and transchromosomal mice may be capable of producing multiple i so types of human monoclonal antibodies to CLDN18.2 (e.g., IgG, IgA and/or IgE) by undergoing V-D-J recombination and isotype switching.
"Reduce", "decrease" or "inhibit" as used herein means an overall decrease or the ability to cause an overall decrease, preferably of 5% or greater, 10% or greater, 20% or greater, more preferably of 50% or greater, and most preferably of 75% or greater, in the level, e.g. in the level of expression or in the level of proliferation of cells.
Terms such as "increase" or "enhance" preferably relate to an increase or enhancement by about at least 10%, preferably at least 20%, preferably at least 30%, more preferably at least 40%, more preferably at least 50%, even more preferably at least 80%, and most preferably at least 100%, at least 200%, at least 500%, at least 1000%, at least 10000% or even more.
Antibodies described herein can be produced by a variety of techniques, including conventional monoclonal antibody methodology, e.g., the standard somatic cell hybridization technique of Kohler and Milstein, Nature 256: 495 (1975). Although somatic cell hybridization procedures are preferred, in principle, other techniques for producing monoclonal antibodies can be employed, e.g., viral or oncogenic transformation of B- lymphocytes or phage display techniques using libraries of antibody genes.
The preferred animal system for preparing hybridomas that secrete monoclonal antibodies is the murine system. Hybridoma production in the mouse is a very well established procedure. Immunization protocols and techniques for isolation of immunized splenocytes for fusion are known in the art. Fusion partners (e.g., murine myeloma cells) and fusion procedures are also known.
Other preferred animal systems for preparing hybridomas that secrete monoclonal antibodies are the rat and the rabbit system (e.g. described in Spieker-Polet et al., Proc. Natl. Acad. Sci. U.S.A. 92:9348 (1995), see also Rossi et al., Am. J. Clin. Pathol. 124: 295 (2005)).
In yet another preferred embodiment, human monoclonal antibodies can be generated using transgenic or transchromosomal mice carrying parts of the human immune system rather than the mouse system. These transgenic and transchromosomic mice include mice known as HuMAb mice and KM mice, respectively, and are collectively referred to herein as "transgenic mice." The production of human antibodies in such transgenic mice can be performed as described in detail for CD20 in WO2004035607
Yet another strategy for generating monoclonal antibodies is to directly isolate genes encoding antibodies from lymphocytes producing antibodies of defined specificity e.g. see Babcock et al., 1996; A novel strategy for generating monoclonal antibodies from single, isolated lymphocytes producing antibodies of defined specificities. For details of recombinant antibody engineering see also Welschof and Kraus, Recombinant antibodes for cancer therapy ISBN-0-89603-918-8 and Benny K.C. Lo Antibody Engineering ISBN 1-58829-092-1.
To generate antibodies, mice can be immunized with carrier-conjugated peptides derived from the antigen sequence, i.e. the sequence against which the antibodies are to be directed, an enriched preparation of recombinantly expressed antigen or fragments thereof and/or cells expressing the antigen, as described. Alternatively, mice can be immunized with DNA encoding the antigen or fragments thereof. In the event that immunizations using a purified or enriched preparation of the antigen do not result in antibodies, mice can also be immunized with cells expressing the antigen, e.g., a cell line, to promote immune responses.
The immune response can be monitored over the course of the immunization protocol with plasma and serum samples being obtained by tail vein or retroorbital bleeds. Mice with sufficient titers of immunoglobulin can be used for fusions. Mice can be boosted intraperitonealy or intravenously with antigen expressing cells 3 days before sacrifice and removal of the spleen to increase the rate of specific antibody secreting hybridomas. To generate hybridomas producing monoclonal antibodies, splenocytes and lymph node cells from immunized mice can be isolated and fused to an appropriate immortalized cell line, such as a mouse myeloma cell line. The resulting hybridomas can then be screened for the production of antigen-specific antibodies. Individual wells can then be screened by ELISA for antibody secreting hybridomas. By Immunofluorescence and FACS analysis using antigen expressing cells, antibodies with specificity for the antigen can be identified. The antibody secreting hybridomas can be replated, screened again, and if still positive for monoclonal antibodies can be subcloned by limiting dilution. The stable subclones can then be cultured in vitro to generate antibody in tissue culture medium for characterization.
Antibodies also can be produced in a host cell transfectoma using, for example, a combination of recombinant DNA techniques and gene transfection methods as are well known in the ait (Morrison, S. (1985) Science 229: 1202).
For example, in one embodiment, the gene(s) of interest, e.g., antibody genes, can be ligated into an expression vector such as a eukaryotic expression plasmid such as used by the GS gene expression system disclosed in WO 87/04462, WO 89/01036 and EP 338 841 or other expression systems well known in the art. The purified plasmid with the cloned antibody genes can be introduced in eukaryotic host cells such as CHO cells, NS/0 cells, HEK293T cells or HEK293 cells or alternatively other eukaryotic cells like plant derived cells, fungal or yeast cells. The method used to introduce these genes can be methods described in the art such as electroporation, lipofectine, lipofectamine or others. After introduction of these antibody genes in the host cells, cells expressing the antibody can be identified and selected. These cells represent the transfectomas which can then be amplified for their expression level and upscaled to produce antibodies. Recombinant antibodies can be isolated and purified from these culture supernatants and/or cells.
Alternatively, the cloned antibody genes can be expressed in other expression systems, including prokaryotic cells, such as microorganisms, e.g. E. coli. Furthermore, the antibodies can be produced in transgenic non-human animals, such as in milk from sheep and rabbits or in eggs from hens, or in transgenic plants; see e.g. Verma, R., et al. (1998) J. Immunol. Meth. 216: 165-181; Pollock, et al. (1999) J. Immunol. Meth. 231: 147-157; and Fischer, R., et al. (1999) Biol. Chem. 380: 825-839. Chimerization
The immunogenicity of murine antibodies in man can be reduced or completely avoided if respective antibodies are chimerized or humanized. Chimeric antibodies are antibodies, the different portions of which are derived from different animal species, such as those having a variable region derived from a murine antibody and a human immunoglobulin constant region. Chimerisation of antibodies is achieved by joining of the variable regions of the murine antibody heavy and light chain with the constant region of human heavy and light chain (e.g. as described by Kraus et al., in Methods in Molecular Biology series, Recombinant antibodies for cancer therapy ISBN-0-89603-918-8). In a preferred embodiment chimeric antibodies are generated by joining human kappa-light chain constant region to murine light chain variable region. In an also preferred embodiment chimeric antibodies can be generated by joining human lambda-light chain constant region to murine light chain variable region. The preferred heavy chain constant regions for generation of chimeric antibodies are IgGl, IgG3 and IgG4. Other preferred heavy chain constant regions for generation of chimeric antibodies are IgG2, IgA, IgD and IgM.
Humanization
Antibodies interact with target antigens predominantly through amino acid residues that are located in the six heavy and light chain complementarity detennining regions (CDRs). For this reason, the amino acid sequences within CDRs are more diverse between individual antibodies than sequences outside of CDRs. Because CDR sequences are responsible for most antibody-antigen interactions, it is possible to express recombinant antibodies that mimic the properties of specific naturally occurring antibodies by constructing expression vectors that include CDR sequences from the specific naturally occurring antibody grafted onto framework sequences from a different antibody with different properties (see, e.g., Riechmann, L. et al. (1998) Nature 332: 323-327; Jones, P. et al. (1986) Nature 321: 522-525; and Queen, C. et al. (1989) Proc. Natl. Acad. Sci. U. S. A. 86: 10029-10033). Such framework sequences can be obtained from public DNA databases that include germline antibody gene sequences. These germline sequences will differ from mature antibody gene sequences because they will not include completely assembled variable genes, which are formed by V (D) J joining during B cell maturation. Germline gene sequences will also differ from the sequences of a high affinity secondary repertoire antibody at individual evenly across the variable region. The ability of antibodies to bind an antigen can be determined using standard binding assays (e.g., ELISA, Western Blot, Immunofluorescence and flow cytometric analysis).
To purify antibodies, selected hybridomas can be grown in two-liter spinner-flasks for monoclonal antibody purification. Alternatively, antibodies can be produced in dialysis based bioreactors. Supernatants can be filtered and, if necessary, concentrated before affinity chromatography with protein G-sepharose or protein A-sepharose. Eluted IgG can be checked by gel electrophoresis and high performance liquid chromatography to ensure purity. The buffer solution can be exchanged into PBS, and the concentration can be determined by OD280 using 1.43 extinction coefficient. The monoclonal antibodies can be aliquoted and stored at -80°C.
To determine if the selected monoclonal antibodies bind to unique epitopes, site-directed or multi-site directed mutagenesis can be used.
To determine the isotype of antibodies, isotype ELISAs with various commercial kits (e.g. Zymed, Roche Diagnostics) can be performed. Wells of microtiter plates can be coated with anti-mouse Ig. After blocking, the plates are reacted with monoclonal antibodies or purified isotype controls, at ambient temperature for two hours. The wells can then be reacted with either mouse IgGl, IgG2a, IgG2b or IgG3, IgA or mouse IgM-specific peroxidase- conjugated probes. After washing, the plates can be developed with ABTS substrate (1 mg/ml) and analyzed at OD of 405-650. Alternatively, the IsoStrip Mouse Monoclonal Antibody Isotyping Kit (Roche, Cat. No. 1493027) may be used as described by the manufacturer.
In order to demonstrate presence of antibodies in sera of irnmunized mice or binding of monoclonal antibodies to living cells expressing antigen, flow cytometry can be used. Cell lines expressing naturally or after transfection antigen and negative controls lacking antigen expression (grown under standard growth conditions) can be mixed with various concentrations of monoclonal antibodies in hybridoma supernatants or in PBS containing 1% FBS, and can be incubated at 4°C for 30 min. After washing, the APC- or Alexa647-labeled ami IgG antibody can bind to antigen-bound monoclonal antibody under the same conditions as the primary antibody staining. The samples can be analyzed by flow cytometry with a FACS instrument using light and side scatter properties to gate on single, living cells. In order to distinguish antigen-specific monoclonal antibodies from non-specific binders in a single measurement, the method of co-transfection can be employed. Cells transiently transfected with plasmids encoding antigen and a fluorescent marker can be stained as described above. Transfected cells can be detected in a different fluorescence channel than antibody-stained cells. As the majority of transfected cells express both transgenes, antigen-specific monoclonal antibodies bind preferentially to fluorescence marker expressing cells, whereas non-specific antibodies bind in a comparable ratio to non-transfected cells. An alternative assay using fluorescence microscopy may be used in addition to or instead of the flow cytometry assay. Cells can be stained exactly as described above and examined by fluorescence microscopy.
In order to demonstrate presence of antibodies in sera of immunized mice or binding of monoclonal antibodies to living cells expressing antigen, immunofluorescence microscopy analysis can be used. For example, cell lines expressing either spontaneously or after transfection antigen and negative controls lacking antigen expression are grown in chamber slides under standard growth conditions in DMEM/F12 medium, supplemented with 10 % fetal calf serum (FCS), 2 mM L-glutamine, 100 IU/ml penicillin and 100 μ^ητΐ streptomycin. Cells can then be fixed with methanol or paraformaldehyde or left untreated. Cells can then be reacted with monoclonal antibodies against the antigen for 30 min. at 25°C. After washing, cells can be reacted with an AlexaSSS-labelled anti-mouse IgG secondary antibody (Molecular Probes) under the same conditions. Cells can then be examined by fluorescence microscopy.
Cell extracts from cells expressing antigen and appropriate negative controls can be prepared and subjected to sodium dodecyl sulfate (SDS) polyacrylamide gel electrophoresis. After electrophoresis, the separated antigens will be transferred to nitrocellulose membranes, blocked, and probed with the monoclonal antibodies to be tested. IgG binding can be detected using anti-mouse IgG peroxidase and developed with ECL substrate.
Antibodies can be further tested for reactivity with antigen by Immunohistochemistry in a manner well known to the skilled person, e.g. using paraformaldehyde or acetone fixed cryosections or paraffin embedded tissue sections fixed with paraformaldehyde from non- cancer tissue or cancer tissue samples obtained from patients during routine surgical procedures or from mice carrying xenografted tumors inoculated with cell lines expressing spontaneously or after transfection antigen. For immunostaining, antibodies reactive to antigen can be incubated followed by horseradish-peroxidase conjugated goat anti-mouse or goat anti-rabbit antibodies (DAKO) according to the vendors instructions.
Antibody conjugates which bind to CLDN18.2 also can be tested in an in vivo model (e.g. in immune deficient mice carrying xenografted tumors inoculated with cell lines expressing CLDN18.2, e.g. DAN-G, SNU-16, or ΚΑΤΟ-ΙΠ, or after transfection, e.g. HEK293) to determine their efficacy in controlling growth of CLDN18.2-expressing tumor cells.
Antibody conjugates can be administered to tumor free mice followed by injection of tumor cells to measure the effects of the antibody conjugates to prevent formation of tumors or tumor-related symptoms. Antibody conjugates can be administered to tumor-bearing mice to determine the therapeutic efficacy of respective antibody conjugates to reduce tumor growth, metastasis or tumor related symptoms. Antibody conjugate application can be combined with application of other substances as cytostatic drugs, growth factor inhibitors, cell cycle blockers, angiogenesis inhibitors or other antibodies to determine synergistic efficacy and potential toxicity of combinations. To analyze toxic side effects mediated by antibody conjugates animals can be inoculated with antibody conjugates or control reagents and thoroughly investigated for symptoms possibly related to CLDN18.2 antibody conjugate therapy. Possible side effects of in vivo application of CLDN18.2 antibody conjugates particularly include toxicity at CLDN18.2 expressing tissues including stomach.
Mapping of epitopes recognized by antibodies can be performed as described in detail in "Epitope Mapping Protocols (Methods in Molecular Biology) by Glenn E. Morris ISBN- 089603-375-9 and in "Epitope Mapping: A Practical Approach" Practical Approach Series, 248 by Olwyn M. R. Westwood, Frank C. Hay.
The compounds and agents described herein may be administered in the form of any suitable pharmaceutical composition.
Pharmaceutical compositions are preferably sterile and contain an effective amount of the antibody conjugates described herein and optionally of further agents as discussed herein to generate the desired reaction or the desired effect. Pharmaceutical compositions ace usually provided in a uniform dosage form and may be prepared in a manner known per se. A pharmaceutical composition may e.g. be in the form of a solution or suspension.
A pharmaceutical composition may comprise salts, buffer substances, preservatives, carriers, diluents and/or excipients all of which are preferably pharmaceutically acceptable. The term "pharmaceutically acceptable" refers to the non-toxicity of a material which does not interact with the action of the active component of the pharmaceutical composition.
Salts which are not pharmaceutically acceptable may used for preparing pharmaceutically acceptable salts and are included in the invention. Pharmaceutically acceptable salts of this kind comprise in a non limiting way those prepared from the following acids: hydrochloric, hydrobromic, sulfuric, nitric, phosphoric, maleic, acetic, salicylic, citric, formic, malonic, succinic acids, and the like. Pharmaceutically acceptable salts may also be prepared as alkali metal salts or alkaline earth metal salts, such as sodium salts, potassium salts or calcium salts.
Suitable buffer substances for use in a pharmaceutical composition include acetic acid in a salt, citric acid in a salt, boric acid in a salt and phosphoric acid in a salt
Suitable preservatives for use in a pharmaceutical composition include benzalkonium chloride, chlorobutanol, paraben and thimerosal.
An injectible formulation may comprise a pharmaceutically acceptable excipient such as Ringer Lactate.
The term "carrier" refers to an organic or inorganic component, of a natural or synthetic nature, in which the active component is combined in order to facilitate, enhance or enable application. According to the invention, the term "carrier" also includes one or more compatible solid or liquid fillers, diluents or encapsulating substances, which are suitable for administration to a patient.
Possible carrier substances for parenteral administration are e.g. sterile water, Ringer, Ringer lactate, sterile sodium chloride solution, polyalkylene glycols, hydrogenated naphthalenes and, in particular, biocompatible lactide polymers, lacti.de/glycolide copolymers or polyoxyethylene/polyoxy- propylene copolymers.
The term "excipient" when used herein is intended to indicate all substances which may be present in a pharmaceutical composition and which are not active ingredients such as, e.g., carriers, binders, lubricants, thickeners, surface active agents, preservatives, emulsifiers, buffers, flavoring agents, or colorants.
The agents and compositions described herein may be administered via any conventional route, such as by parenteral administration including by injection or infusion. Adrninistration is preferably parenterally, e.g. intravenously, intraarterially, subcutaneously, intradermally or intramuscularly.
Compositions suitable for parenteral administration usually comprise a sterile aqueous or nonaqueous preparation of the active compound, which is preferably isotonic to the blood of the recipient. Examples of compatible carriers and solvents are Ringer solution and isotonic sodium chloride solution. In addition, usually sterile, fixed oils are used as solution or suspension medium.
The agents and compositions described herein are administered in effective amounts. An "effective amount" refers to the amount which achieves a desired reaction or a desired effect alone or together with further doses. In the case of treatment of a particular disease or of a particular condition, the desired reaction preferably relates to inhibition of the course of the disease. This comprises slowing down the progress of the disease and, in particular, interrupting or reversing the progress of the disease. The desired reaction in a treatment of a disease or of a condition may also be delay of the onset or a prevention of the onset of said disease or said condition.
An effective amount of an agent or composition described herein will depend on the condition to be treated, the severeness of the disease, the individual parameters of the patient, including age, physiological condition, size and weight, the duration of treatment, the type of an accompanying therapy (if present), the specific route of administration and similar factors. Accordingly, the doses administered of the agents described herein may depend on various of such parameters. In the case that a reaction in a patient is insufficient with an initial dose, higher doses (or effectively higher doses achieved by a different, more localized route of administration) may be used.
The agents and compositions provided herein may be used alone or in combination with conventional therapeutic regimens such as surgery, irradiation, chemotherapy and/or bone marrow transplantation (autologous, syngeneic, allogeneic or unrelated).
Treatment of cancer represents a field where combination strategies are especially desirable since frequently the combined action of two, three, four or even more cancer drugs/therapies generates synergistic effects which are considerably stronger than the impact of a monotherapeutic approach. Thus, in another embodiment of the present invention, a cancer treatment may be effectively combined with various other drugs. Among those are e.g. combinations with conventional tumor therapies, multi-epitope strategies, additional immunotherapy, and treatment approaches targeting angiogenesis or apoptosis (for review see e.g. Andersen et al. 2008: Cancer treatment: the combination of vaccination with other therapies. Cancer Immunology Immunotherapy, 57(11): 1735-1743.) Sequential administration of different agents may inhibit cancer cell growth at different check points, while other agents may e.g. inhibit neo-angiogenesis, survival of malignant cells or metastases, potentially converting cancer into a chronic disease.
The agents and compositions described herein can be administered to patients, e.g., in vivo, to treat or prevent a variety of disorders such as those described herein. Preferred patients include human patients having disorders that can be corrected or ameliorated by administering the agents and compositions described herein. This includes disorders involving cells characterized by an altered expression pattern of CLDN18.2.
For example, in one embodiment, the agents and compositions described herein can be used to treat a patient with a cancer disease, e.g., a cancer disease such as described herein characterized by the presence of cancer cells expressing CLDN18.2.
The pharmaceutical compositions and methods of treatment described according to the invention may also be used for immunization or vaccination to prevent a disease described herein. The present invention is further illustrated by the following examples which are not construed as limiting the scope of the invention.
EXAMPLES
EXAMPLE 1 : MATERIALS AND METHODS
1. Endocytosls
Endocytosis of CLDN18.2 bound IMAB362 was determined using a cytotoxicity based endocytosis assay that relies on the co-internalization of the target bound antibody and a saporin-conjugated anti-human or anti-mouse IgG Fab fragment (Fab-ZAP human, Advanced Targeting Systems, ΓΓ-51, Lot: #93-23; Fab-ZAP mouse, Advanced Targeting Systems, ΓΓ- 48, Lot: #93-21). Saporin is a ribosome-inactivating protein, which upon internalization inhibits protein biosynthesis and therefore results in cell death. To guarantee optimal cell lysis, Fab-ZAP antibody was applied in at least 6-fold molarity compared to the target antibody.
Stably transfected HEK293-CLDN18.2 cells were harvested with 0.05% Trypsin/EDTA (Gibco, 25300-054) and 2.5 x 103 cells/well were seeded in 50 μl growth medium in a 96-well cell culture plate. After 24 h, 25 μl of Fab-ZAP and 25 μl of anti-CLDN18.2 mAB or isotype control antibody diluted in cell culture medium were added to the cells (Table 1). Cells were cultured for additional 72 h.
Figure imgf000074_0001
Table 1: Antf-CLDN18.2 mAB and Fab-ZAP concentrations for endocytosis assay. Molecular weight: ~150 kDa for IMAB362 and 110 kDa for FabZAP.
Cell viability was analyzed as described in 6. Cells incubated without antibodies in the presence of Fab-ZAP were used as control. 2. Epitope mapping
The antigenic epitope responsible for CLDN18.2 specificity was analyzed by flow cytometry (see 5) on HEK293T cells transiently overexpressing CLDN18.2 mutants. A total of eight CLDN18.2 mutants with single amino acid substitutions within the first extracellular domain were generated by PCR. Therefore, amino acids of CLDN18.2 were substituted with amino acids of the homologous protein CLDN18.1 at corresponding positions. HEK293T cells were co-transfected with plasmids coding for a specific CLDN18.2 mutant and EGFP as reporter gene. Purified antibodies were tested at a concentration of 5 μg/ml, whereas antibodies derived from hybridoma supernatants were diluted up to 1:4 before testing. To determine whether the antibody binding was influenced by a specific amino acid substitution, the mean fluorescence intensity (MFI) measured in the transfected (EGFP positive) cell population was compared between a mutant exhibiting the highest MFI value and the mutant of interest If MFI of the mutant of interest was below 50% the amino acid residue was characterized to be essential for antibody binding and CLDN18.2 specificity.
3. Antibody drug conjugates
The conjugations of DM4 and vcMMAE to the monoclonal antibody IMAB362 (batch # p412118) and the analytical characterization were performed at Piramal Healthcare (Grangemouth, UK). The methods are briefly described in the next section:
DM4 was coupled to IMAB362 via SPDB (N-succiniimdyl-3-(2-pyridy The SPDB reagent is an amino and sulfhydryl reactive heterobifunctional protein crosslinker which reacts via an N -hydroxysuccinimide (NHS) ester with primary amines (as found in lysine side chains or the N-terminus of proteins) of the antibody and via a pyridinyldisulfide group with the sulhydryl group of DM4 to yield a reversible disulfide bond (Figure 1). hi brief, for DM4 conjugation, IMAB362 was diafiltered into PBS buffer (pH 7.2) using an ultra centrifugal filter and coupled to SPDB at a molar ratio of 1:6 (IMAB362:SPDB) for 1 h at RT. The modified antibody was dialyzed against 35 mM citrate buffer (pH 5.5) and the linker to antibody ratio was determined. DM4 was conjugated to IMAB362-SPDB at a molar ratio of 1:6 (IMAB362-SPDB:DM4) for 19 h at 2-8°C. The conjugated antibody was adjusted to the storage buffer (20 mM His, 85 mg/ml sucrose, pH 5.8) and stored at -80 °C. Drug antibody ratio was analyzed by UV spectrometry, the monomer content by SEC-HPLC and free drug content by RP-HPLC.
vcMMAE was coupled to thiolated IMAB362. Therefore, IMAB362 was initially thiolated with the heterobifunctional linker 2-ΓΓ (2-iminothiolane) which reacts with free amines of lysine residues. Then, vcMMAE, containing the cathepsin cleavable peptide linker Val-Cit (vc), was conjugated via valine to the sulfhydryl group of the thiolated antibody (Figure 1). In brief, IMAB362 was diafiltered into PBS buffer (pH 7.2) using an ultra centrifugal filter and incubated with 2-ΓΓ at a molar ratio of 1:20 (IMAB362:2-IT) for 2 h at RT. The modified antibody was dialyzed into 35 mM citrate buffer (pH 5.5) and the linker to antibody ratio was determined. Thereafter, vcMMAE was conjugated to thiolated IMAB362 at a molar ratio of 1:6 (IMAB362-SH:vcMMAE) by incubation for 20 h at 2-8°C. Conjugated antibodies were dialyzed into storage buffer (20 mM His, 85 mg/mL sucrose, pH 5.8) and stored at -80°C. Drug antibody ratio was analyzed by UV spectrometry, the monomer content by SEC-HPLC and free drug content by RP-HPLC.
4. Cell culture
Cell lines were cultivated in accordance with the suppliers' instructions and Ganymed's cell line data sheets in cell-type specific medium at 37°C in humidified incubators with 5% or 7.5% CO2 (Table 2). Cell culture media and supplements were obtained from Invitrogen, Gibco and Sigma.
Figure imgf000077_0001
5. Flow cytometry
The relative binding affinities and specificities of anti-CLDN18.2 naked antibodies and antibody drug conjugates were determined by flow cytometry using CLDN18.2 positive and negative cell lines.
Cells from an exponentially growing culture were harvested with 0.05% Trypsin/EDTA (Gibco, 2S300-0S4), and counted using a Neubauer counting chamber. Cells were centrifuged 5 min at 1,500 rpm (468 x g), the supernatant was discarded and cells were resuspended in FACS buffer (PBS containing 2% FCS (Gibco, 10270-106) for analysis with toxin-conjugated antibodies, PBS containing 2% FCS and 2 raM EDTA for screening of CLDN18.2 reactive naked antibodies) at 2 x 106 cells/ml. 100 μl of the cell suspension per well (correspond to 2 x 10s cells/well) were transferred to a round bottom 96-well microtiter plate. After centrifugation for 1 min at 1500 rpm, supernatant was discarded and cells were resuspended in FACS buffer containing toxin-conjugated or naked antibodies at appropriate concentrations (up to 20 μg/ml for relative affinity measurement or 50 μg/ml for expression control) and incubated for 30-45 min at 4°C (Table 3). The cells were centrifuged for 1 min at 1500 rpm and the supernatant was discarded. After the cells were washed three times with FACS buffer, they were resuspended in FACS buffer containing APC-conjugated anti-human IgG (Jackson Immuno Research, 109-136-170) or APC-conjugated goat-anti-mouse IgG (Jackson Immuno Research, 115-136-146) or Protein L-FITC (1 μg/ml, analysis of chim mAB294) and incubated for 30 min at 4°C (Table 3). After incubation, 100 μl FACS buffer were added to each sample, the cells were centrifuged for 1 min at 1500 rpm and the supernatant was discarded. The washing step with FACS buffer was repeated twice. Finally, the cells were resuspended in 100 μl FACS buffer and binding was determined using a BD FACS Array Bioanalyzer.
It should be noted that toxin-conjugated and naked antibodies were applied at equal concentrations. Differences between the molecular weight of the antibodies were neglected.
Figure imgf000078_0001
Figure imgf000079_0001
Table 3: Flow cytometry experimental details.
6. Viability assay
The effect of JMAB362-DM4 and IMAB362-vcMMAE on cell viability was determined using a colorimetric assay that detects cellular metabolic activities. The assay is based on the ability of metabolically active cells to reduce yellow XTT (2,3-Bis-(2-methoxy-4-nitro-5- sulfophenyl)-2H-tetrazolium- 5 -caiboxanilide) to an orange colored formazan compound which can be detected by spectrophotometry. The intensity of the dye is proportional to the number of living cells.
Cells were harvested with 0.05% Trypsin/EDTA (Gibco, 25300-054), resuspended in cell culture medium (Table 2) and 50 μl of the cell suspension with the corresponding amount of cells were seeded per well in 96-well cell culture plates (Table 4). After 24 h, toxin- conjugated IMAB362 or control antibodies diluted in 50 μl medium at appropriate concentrations were added and cells were cultured for another 72 h.
Figure imgf000079_0002
Table 4: Overview of cell lines used in viability assays.
Cell viability was analyzed using the AppliChem Cell proliferation Kit II (AppliChem, A8088, 1000) according to the manufacturer's instructions. After 3-5 h incubation with XTT reagent, the absorbance at 480 nm was measured (reference 630 run) using a spectrophotometer (Tecan). Reduction of viability was calculated using the following equation:
Figure imgf000080_0001
The ECSO values were determined with GraphPad Prism 6 using non-linear regression.
7. Bystander assay
The bystander activity of toxin-conjugated IMAB362 antibodies on target negative cells was analyzed in vitro by co-culturing the CLDN18.2 negative, luciferase expressing cell line PA- l(Luc) in the presence or absence of the CLDN18.2 positive cell line NUGC-4 10cE8. Therefore, l.S * 103 PA- 1 (Luc) cells per well were seeded for single culture or together with l.S * 103 NUGC-4 10cE8 cells per well for co-culture in RPMI medium supplemented with 10% FCS and 1% pen/strep. After 24 h, IMAB362-DM4, IMAB362-vcMMAE or unconjugated IMAB362 as negative control were added and cells were cultured for another 72 h. Cell viability was analyzed as described in 6. Lysis of target negative cells was determined by measuring the bioluminescence of luciferase expressing PA-l(Luc) cells. Therefore, 50 μl luciferin mix (1.92 mg/ml D-luciferin (Sigma, 50227) and 160 mM HEPES in ddH20) were added per well. The plate was incubated in the dark at RT for 90 min and bioluminescence was measured using a luminometer (Infinite M200, TECAN). Results are expressed as integrated digital relative light units (RLU). Reduction of viability was calculated as described in 6.
8. Animal experiments
All xenograft studies were carried out in compliance with the national regulations and ethical guidelines for experimental animal studies. All animals were maintained under specific pathogen-free conditions in individual ventilated cages and under a 12 h artificical light-dark cycle. Food and water was provided ad libitium. Before start of studies mice were allowed to acclimate for a minimum of 6 days. 8.1. Maximum tolerated dose (MTD) study
Xenograft tumors were inoculated by subcutaneous injection of 8.5 x 106 BxPC-3~CLDNl 8.2 human pancreatic tumor cells in 200 μl PBS into the flanks of female Hsd:Athymic Nude- Foxnlnu mice. To determine MTD and efficacy of anti-CLDNl 8.2 antibody drug conjugates, tumor-bearing mice received different doses of IMAB362-DM4 or IMAB362-vcMMAE. The maximal applicable dose was limited by the antibody concentration and the injection volume recommended from GV-SOLAS for intravenous injection in mice (~200 μl). Both antibodies were applied in the maximal concentration as single and repeated dose (i.e. IS and 16 mg/kg, respectively) as well as half of this concentration (i.e. 7.5 and 8 mg/kg respectively) or vehicle control (group size: n=5). Antibodies were injected intravenously on day 14 post graft and for repeated dose additionally on day 21 post graft. Body weight, animal health, behavior and tumor size were monitored twice a week with a caliper and tumor volumes were calculated according to the following formula: [length x width x (width/2)]. All animals were dissected when the first tumor of the vehicle group reached a maximum of 1400 mm3 or when the tumor became ulcerous (day 49 post graft for IMAB362-DM4, day 37 post graft for IMAB362-vcMMAE). Blood samples for clinical chemistry were collected under general anesthesia initiated with 250 μl i.p. of a mixture consisting of 1.25 ml ketamine, 1 ml xylazine (2%) and 7.75 ml ¾0. Subsequently, mice were perfused with PBS followed by a perfusion with 4% formalin under general anesthesia. Selected organs and tissues (stomach, esophagus, brain, heart, kidney, liver, lung, pancreas, spleen, duodenum, ileum, colon, uterus and ovaries) were dissected and fixed in 4% formalin, stored at 4°C and finally paraffin embedded. Three- micrometer tissue sections were cut from each FFPE (formalin fixated paraffin embedded) sample and mounted on adhesive slides (SuperFrost Ultra Plus, Thermo Fisher Scientific). After baking for 60 min at 58°C the FFPE tissue sections were deparaffinized using xylene and rehydrated through a graded ethanol series (2x 100%, 2x 96%, 2x 70% ethanol for 3 min each). Nuclei were stained with for 5 min at RT with Mayer's hematoxyline, followed by blueing in tap H20. Subsequently the cytoplasm was counterstained with aqueous 0.5% eosin for 2 min at RT. After dehydration through a graded ethanol series and xylene sections were mounted using non-aqueous mounting media X-TRA Kit
8.2. Clinical biochemistry
To test for possible organ toxicity, relevant markers for pancreas-, nephron- and hepatotoxicity were analyzed in serum samples. Levels of alanine aminotransferase/glutainic-pyruvic transaminase (GPT), aspartate aminotransferase/glutamic-oxaloacetic transaminase (GOT), gamma-glutamyltransferase (gamma-GT), alkaline phosphatase (AP), glutamate dehydrogenase (GLDH), creatinine, creatinine kinase (CK), urea, cholinesterase, bilirubin, lipase, alpha-amylase, lactate dehydrogenase (LDH), albumin and total protein were determined at the Universitatsmedizin der Johannes Gutenberg Universitat (Mainz, Germany). Serum samples were prepared from blood obtained after final bleeding. Blood was collected by retrobulbar venipuncture after mice were anesthetized with ketamin/xylazine.
8.3. Efficacy studies
For establishing human xenograft tumors an appropriate number of cells were suspended in a volume of 200 μl PBS and were injected subcutaneously into the flank of female Hsd:Athyrnic Nude-Foxnlnu mice. Tumor bearing mice were treated with a single intravenous injection of IMAB362-DM4 or IMAB362-vcMMAE at doses not exceeding the MTD. The naked antibody control was administered semi-weekly by alternating IV/i.p. injections of ~8 mg/kg IMAB362. In early treatment studies, treatment was initiated 3 days post graft In advanced treatment studies, tumors were grown to a volume between SO and 200 mm3 and mice were redistributed into control and antibody groups with homogenous tumor mean volumes before treatment Body weight, animal health, behavior and tumor size were monitored semi-weekly with a caliper. Tumor volumes were calculated by the following formula: [length x width x (width/2)]. An abort criterion was a tumor size with >16 mm in length or width or with a calculated volume of >1400 mm3. Further abort criterions were ulcerating tumors or when the animal lost more than 10% body weight In case of complete tumor growth inhibition, mice were observed for 120 days after treatment. Persisting tumors were prepared and fixated in 4% formalin for subsequent IHC studies.
EXAMPLE 2: ENDOCYTOSIS SCREENING OF ANTI-CLDN18.2 SPECIFIC ANTIBODIES
While in tumor therapy with naked antibodies, the internalization of target bound antibodies can reduce the number of membrane bound antibodies accessible for the mayor mode of actions, e.g. ADCC and CDC, endocytosis is an essential feature for the development of antibody-drug conjugates (ADC). One important property of the ADCs is the endocytosis of the target-ADC complex. Therefore, the endocytosis rate of the naked antibody is one of the essential key factors for the development of toxin-conjugated antibodies.
Binding properties, i.e. relative affinity to CLDN18.2, cross-reactivity to CLDN18.1 and antigenic epitope mediating CLDN18.2 specificity, were determined for different murine and chimeric anti-CLDN18.2 antibodies by flow cytometric analysis (Table 5 and Table 6).
Antibodies demonstrating high binding to CLDN18.2 were selected for further endocytosis screening.
The efficiency of endocytosis of different CLDN18.2 specific and CLDN18.2/CLDN18.1 reactive antibodies was tested in vitro by co-incubating the antibodies with saporin conjugated Fab fragments (Fab-ZAP) together with CLDN18.2 expressing HEK293-CLDN18.2 cells. Upon co-internalization with the target bound antibody, saporin inhibits the protein biosynthesis of the cell resulting in cell death which can be monitored by a cell viability assay. This method is an indirect way to assess the endocytosis of the target-antibody complex. Antibodies were tested as chimeric antibodies when available, otherwise endocytosis screening was performed with murine antibodies.
The chim mAb362 (IMAB362) as well as chim mAB294 can be efficiently internalized upon CLDN18.2 binding, leading to a reduction of HEK293-CLDN18.2 cell viability even at very low antibody concentrations (ΓΜΑΒ362: EC50 = 11 ng/ml; chim mAB294: EC50 = 10 ng/ml). In contrast, chim mAB308 and chim mAB359 did not reduce cell viability (Figure 2). As chim mAB294 and chim mAB359 exhibiting similar relative binding affinities and show considerable discrepancies in internalization (chim mAB294: ECSO = 10 ng/ml; chim mAB359: no endocytosis), the efficiency of endocytosis seems not only to correlate with antibody binding affinity but also to be dependent on the binding epitope.
Even the internalization of mu mAB362 was superior to all other tested murine CLDN18.2 reactive antibodies which did not reveal substantial endocytosis in Fab-Zap assay (Figure 3). In summary, the CLDN18.2 specific antibodies IMAB362 and chim mAB294 were efficiently internalized upon binding to CLDN18.2 and are suitable for the further evaluation as antibody drug conjugates.
Figure imgf000084_0001
Figure imgf000085_0001
Figure imgf000086_0001
EXAMPLE 3: TOXIN-CONJUGATION OF IMAB362
Piramal Healthcare performed the toxin conjugation including final buffer exchange. Stability studies were performed to show that the ADCs remain within specification during a certain period if stored under defined storage conditions. 1MAB362 was conjugated to MMAE via the cleavable valine-citrulline linker (vc linker) or to DM4 via the cleavable N-succinimidyl- 4-{2-pyridyldithio)butyrate linker (SPDB linker). The IMAB362 toxin conjugates were stored in storage buffer (20 mM histidine and 85 mg/ml sucrose, pH S.8) at 2-8 °C.
Figure imgf000087_0001
IMAB362-DM4 and IMAB362-vcMMAE both demonstrate a high monomer content of >95% and only low amounts of free drug (<1%). The 28-day stability testing of toxin- conjugated IMAB362 antibodies at a storage temperature of 2-8 °C show only a small decrease of the monomer content and a low increase in free drug for both ADCs. Both antibodies were efficiently conjugated and exhibit a drug to antibody ratio of 3.2 for IMAB362-DM4 and 4.5 for IMAB362-vcMMAE (Table 7).
EXAMPLE 4: BINDING OF TMAB362-ADCS
The binding properties of IMAB362 have been tested in detail before:
• IMAB362 binds to the first extracellular loop of claudin 18 splice variant 2 (CLDN18.2).
• Affinity to CLDN18.2 is in the low nanomolar range.
• No cross-reactivity with any CLDN18.2 negative cell or tissue type was observed.
• No cross-reactivity with the closest related family member claudin 18 splice variant- 1 (CLDN18.1). The relative binding affinities of DM4- and MMAE-conjugated IMAB362 antibodies were compared with unconjugated IMAB362 by flow cytometry using cell lines endogenously and ectopically expressing CLDN18.2. Binding properties were tested at different antibody concentrations in a range of 0.1 to 20 μg/ml (Figure 4, Table 8).
Ċ
Figure imgf000089_0001
Compared with unconjugated IMAB362, DM4- and MMAE -conjugated IMAB362 showed slightly reduced relative binding affinities on cells endogenously and ectopically expressing CLDN18.2 (Figure 4, Table 8). Both toxin-conjugated antibodies had very similar ECSO values, but slightly different maximum binding values in which IMAB362-DM4 exhibited higher maxinmm binding (Table 8).
CLDN18.2-mediated binding of IMAB362 -toxin conjugated antibodies was tested on ectopically CLDN18.2 overexpressing cells and on the corresponding CLDN18.2 negative parental cell lines (Figure 5, Table 8).
Binding of IMAB362-DM4 and IMAB362-vcMMAE strictly depends on the presence of its target molecule CLDN18.2 (Figure 5). The binding specificity was analyzed by flow cytometry using HEK293 transfectants engineered to overexpress human CLDN18.2 or the highly homologous protein human CLDN18.1. HEK293~mock cells were used as negative controls (Figure 6, Table 8).
IMAB362 and the toxin-conjugated antibodies IMAB362-DM4 and IMAB362-vcMMAE bound with similar relative affinities to HEK293~CLDN18.2 cells ectopically expressing human CLDN18.2 (Table 8). Moreover, IMAB362, DM4- and MMAE-conjugated IMAB362 did not show cross-reactivity to human CLDN18.1 or mock transfected cells (Figure 6B and C).
EXAMPLE 5: EFFICACY AND SPECIFICITY OF IMAB362-ADCS IN VITRO 1. Influence on cell viability
The influence of IMAB362-DM4 and IMAB362-vcMMAE on cell viability was tested with several human gastric and pancreatic cancer cell lines endogenously and ectopically expressing CLDN18.2 using a colorimetric XTT-based assay for the spectrophotometric quantification of metabolically active cells. The anti-tumoral activities were tested at different antibody concentrations in a range of 3 to 16875 ng/ml (Figure 7, Table 9).
IMAB362-DM4 and IMAB362-vcMMAE efficiently inhibited the viability of the gastric cancer cell line NUGC-4, NCI-N87-CLDN18.2 and the pancreatic cell line BxPC-3~CLDN18.2 in vitro (Figure 7). Both IMAB362-toxin conjugates inhibited cell viabilities of endogenously
CLDN18.2 expressing NUGC-4 cells (ECSO values: 155 - 631 ng/ml, maximum reduction of viability. > 85%) and ectopically CLDN18.2 expressing BxPC-3~CLDN18.2 cells (EC50 values:
43 - 54 ng/ml, maximum reduction of viability: > 83%) and NCI N87-CLDN182 cells (EC50 values: 75 - 180 ng/ml, maximum reduction of viability: 45 - 61%) at similar concentrations (Figure 7, Table 9).
Figure imgf000091_0001
Table 9: Overview of caH viability assays performed with IMAB362-toxin conjugates on CLDN1&2 positive cell lines.
In addition, the target-mediated anti-tumoral activity of an ΓΜΑΒ362 -toxin conjugate was tested in vitro using the NCI-N87 CLDN18.2 negative cell line and the stably transfected NCI- N87-CLDN18.2 cell line (Figure 8). IMAB362-vcMMAE inhibited cell viability only on CLDN18.2 positive but not on CLDN18.2 negative cells. Therefore, the activity of ΓΜΑΒ362- vcMMAE strictly depends on CLDN18.2 expression (Figure 8).
The specificity of toxin-conjugated IMAB362 antibodies was analyzed using HEK293 transfectants overexpressing human CLDN18.2 or the highly homologous protein human CLDN18.1. HEK293 cells stably transfected with the empty vector were used as negative controls (Figure 9). IMAB362-vcMMAE reduces cell viability on CLDN18.2 positive but not on CLDN18.2 negative cells. The effect is strictly CLDN18.2 specific because no inhibition of cell proliferation could be observed on cells expressing the homologous protein 18.1 (Figure 9).
In summary, IMAB362-vcMMAE and IMAB362-DM4 showed similar efficacies in vitro and both ADCs highly efficiently inhibited cell viability of several human gastric and pancreatic cancer cell lines. The effect strictly depends on target expression.
2. Bystander effect
The bystander activity of IMAB362-DM4 and IMAB362-vcMMAE in vitro was determined using mixed tumor cell cultures consisting of CLDN18.2 positive and negative cell lines. Target- negative PA- 1 (Luc) cells stably expressing firefly luciferase were used as reporter cells to measure cell lysis. Luciferase activity of co-cultures of luciferase expressing PA- 1 (Luc) and luciferase negative NUGC-4 cells showed that treatment with IMAB362-DM4 or IMAB362-vcMMAE eliminated target negative PA- 1 (Luc) cells very effectively in the presence of target positive NUGC-4 cells. Moreover, PA- 1 (Luc) cells were unaffected in the absence of CLDN18.2 expressing cells (Figure 10).
In summary, IMAB362-DM4 and IMAB362-vcMMAE ADCs were able to induce a bystander effect on neighboring CLDN18.2-negative tumor cells. Both toxins were efficiently released from EMAB362 within CLDN18.2 positive cancer cells and, due to their membrane permeability, are able to exert cytotoxic activity on bystander cells.
EXAMPLE 6: ANTI-TUMORAL EFFICACY OF IMAB362-ADCS IN VIVO 1. Maximum tolerated dose studies
In a first in vivo experiment, the maximum tolerated dose (MTD) of IMAB362-DM4 and IMAB362-vcMMAE was determined in nude mice with advanced human BxPC-3~CLDN18.2 pancreatic xenograft tumors. The MTD refers to the highest dose in a treatment that will produce the desired effect without unacceptable toxicity.
1.1. MTD of IMAB362-DM4
BxPC-3~CLDN8.2 cells ectopically expressing human CLDN18.2 were injected subcutaneously into the flank of female Hsd:Athymic Nude-Foxnlnu mice. After the tumors reached an average size of 75 ± 13 mm3 (mean ± SD) on day 13, mice were grouped into control and antibody groups. Mice received a single dose of 7.5 or IS mg/kg EMAB362-DM4 by IV bolus injection on day 14 or repeated doses of IS mg/kg IMAB362-DM4 by IV bolus injections on day 14 and day 21, respectively. Mice of the control group got vehicle on day 14. On day 49 after engraftment, animals were sacrificed. To test for toxicity, blood samples were collected and organs were prepared and stored for further histopathological studies.
Tumor growth:
IMAB362-DM4 inhibited tumor growth in mice with advanced human BxPC-3~CLDN8.2 xenograft tumors. IMAB362-DM4 single or repeated treatments resulted in nearly complete tumor regressions in all treated mice during the observation period of the study (49 days), independently of the dose. Thus, a single dose of 7.S mg/kg IMAB362-DM4 might be sufficient for complete tumor remission (Figure 11).
Health status:
Bodyweight, animal behavior and general health status were monitored twice a week. All animals showed normal body weight throughout the experiments (Figure 12). No behavioral abnormalities were observed. However, one animal died after intravenous application of the second dose of IS mg/kg IMAB362-DM4 for unknown reason.
Clinical chemistry:
We determined serum levels of alanine transaminase (GPT), aspartate transaminase (GOT), glutamate dehydrogenase (GLDH) alkaline phosphatase (AP), a-amylase, cholinesterase, creatinine kinase (CK), lactate dehydrogenase (LDH), lipase, urea, glucose, total protein and albumin. No differences between the vehicle and the IMAB362-DM4 groups were detected (Figure 13). Creatinine and gamma-glutamyl transferase were below the detection limit in all groups (data not shown). All animals in all groups showed normal serum levels of tested surrogate markers for hepato-, nephron- or pancreatic toxicity even after repeated doses of 15 mg/kg IMAB362-DM4.
In summary, IS mg/kg IMAB362-DM4 (equivalent to 45 mg/m2 in human) as single administration were well tolerated in mice and demonstrated high anti-tumoral efficacy in the treatment of CLDN18.2 positive xenografts. Due to limitations of concentration and injection volume the intravenous injection of higher doses was not feasible and the maximum tolerated single dose could not be determined.
Histological analysis:
For histological analysis, paraffin sections from brain, heart, kidney, liver lung, pancreas, spleen and stomach were hematoxylin-eosin stained and microscopically examined for ΓΜΑΒ362- vcMMAE mediated morphological changes. No morphological changes could be observed in tissue sections from IMAB362-DM4 treated animals compared to vehicle treated mice. Notably, stomach, the only tissue expressing murine Cldnl8.2 did not demonstrate antibody therapy mediated tissue damage (Figure 14).
1.2. MTD of IMAB362-VCMMAE The MTD of IMAB362-vcMMA£ was tested using the same mouse model as for IMAB362- DM4 (1.1). Mice were grouped after the tumors reached an average size of 111 ± 27 mm3 (mean ± SD) on day 13 and treated with a single IV bolus injection of 8 or 16 mg/kg IMAB362- vcMMAE (equivalent to 24 and 48 mg/m2 in human) on day 14 or with repeated doses IV bolus injections of 16 mg/kg EMAB362-vcMMAE on days 14 and 21. Mice of the control group received vehicle control on day 14. Animals were sacrificed on day 37. Clinical biochemistry was determined and organs were collected and stored for further histopathological studies.
Tumor growth:
HMAB362-VCMMAE treatment induced tumor regression and further inhibited tumor growth in mice with advanced human BxPC-3~CLDN8.2 xenograft tumors. At the end of the study (37 days), IMAB362-vcMMAE single or repeated treatments resulted in nearly complete tumor regressions in all treated mice, independently of the dose. Thus, a single dose of 8 mg/kg IMAB362-vcMMAE might be sufficient for complete tumor remission (Figure IS).
Health status:
Bodyweight, animal behavior and general health status were monitored twice a week. All animals showed normal body weight throughout the experiments (Figure 16). Two animals (one mouse from the SD and the RD group) were apathetic for a short time directly after the first injection of 16 mg/kg IMAB362-vcMMAE. However, this abnormal behavior was not observed in any other animal or after the second application of IMAB362-vcMMAE.
Clinical chemistry:
We determined serum levels of surrogate markers for hepato-, nephro- or pancreatic toxicity (alanine transaminase (GPT), aspartate transaminase (GOT), glutamate dehydrogenase (GLDH) alkaline phosphatase (AP), alpha-amylase, cholinesterase, creatinine kinase (CK), lactate dehydrogenase (LDH), lipase, urea, glucose, total protein and albumin). Compared to the vehicle control group, no major deviations of the serum surrogate markers were observed in animals treated with IMAB362-vcMMAE (Figure 17). Creatinine and gamma-glutamyl transferase were below the detection limit in all groups. Thus no signs of liver, pancreas or nephrotoxicity are observed in clinical biochemistry in the dose range evaluated.
Histological analysis: For histological analysis, paraffin sections from brain, heart, kidney, liver lung, pancreas, spleen and stomach were hematoxylin-eosin stained and microscopically examined for IMAB362- vcMMAE mediated morphological changes.
No IMAB362-vcMMAE related morphological changes could be observed in tissue sections from IMAB362-vcMMAE treated animals compared to vehicle treated mice, indicating that IMAB362-vcMMAE does neither induce tissue damage nor inflammation. Notably, even stomach, the only tissue expressing murine Cldnl8.2 did not demonstrate antibody therapy mediated tissue damage (Figure 22).
2. Efficacy studies
The anti-tumoral effects of IMAB362-DM4 and IMAB362-vcMMAE were further analyzed in vivo in athymic Nude-Foxnlnu mice subcutaneously engrafted with endogenously or ectopically CLDN18.2 expressing human carcinoma cells. The optimal therapeutic dose of IMAB362-DM4 and IMAB362-vcMMAE in animal tumor models was determined in dose range finding studies (Figure 18 and Figure 20, respectively). Further efficacy studies on human xenograft tumors were performed with the optimal dose of IMAB362-DM4 and IMAB362-vcMMAE (Figure 19 and Figure 21, respectively).
EMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibit tumor growth and improve survival of tumor bearing mice in different early xenograft models (therapy initiation 3 days after tumor implantation) as well as in treatments of advanced solid tumors (therapy initiation at ~100 mm3 tumor size).
Treatment of advanced human NCI-N87~CLDN18.2 gastric xenograft tumors:
In a dose range finding study, the anti-tumoral efficacy of IMAB362-DM4 and IMAB362- vcMMAE was analyzed in mice with advanced CLDN18.2 positive NCI-N87-CLDN18.2 xenograft tumors. 13 days after engraftment, animals were treated with 1S.2, 7.6 or 3.8 mg/kg IMAB362-DM4 or 16, 8 or 4 mg/kg IMAB362-vcMMAE or vehicle control applied as single IV bolus injections. Animals from the control group received 8 mg/kg unconjugated EMAB362 (twice a week, IV/i.p.).
IMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibited tumor growth, mediated tumor regression and prolonged survival of tumor bearing mice in a dose dependent manner while IMAB362 naked antibody in this advanced treatment model did not exhibit statistically significant anti-tumoral effects (Figure 18). Both IMAB362 toxin-conjugated antibodies prolonged survival of tumor bearing mice (median survival: 73 days in the vehicle group compared to 143 days in the IMAB362-vcMMAE 16 mg/kg and 136 days in the IMAB362-DM4 15.2 mg/kg group) (Figure 18).
Treatment of early human NUGC-4 10cF7-5 sort3a gastric xenograft tumors:
The anti-tumoral efficacy of EMAB362-DM4 and IMAB362-vcMMAE was analyzed in mice subcutaneously engrafted with NUGC-4 10cF7-5 sort3a gastric carcinoma cells endogenously expressing CLDN18.2. Animals were treated on day 3 post engraftment by single dose IV injection of 15.2 mg/kg IMAB362-DM4, 16 mg/kg IMAB362-vcMMAE or vehicle control. EMAB362-DM4 and IMAB362-vcMMAE prevented tumor growth in treated animals while all mice of the control group developed tumors (pO.0001) (Figure 19). After the pre-defined observation time of 120 days, 9 out of 10 animals which received IMAB362-DM4 or HMAB362- vcMMAE were alive and tumor free, whereas all animals from the vehicle control group had to be euthanized due to abort criteria latest on day 41 after engraftment (median survival 34 days, p<0.0003) (Figure 19).
Treatment of advanced human BxPC-3~CLDN18J pancreatic xenograft tumors:
Dose-dependent anti-tumoral activity of IMAB362-DM4 and IMAB362-vcMMAE in vivo was analyzed in a dose range finding study in mice with advanced human BxPC-3~CLDN18.2 pancreatic xenograft tumors. Animals were treated on day 14 with 15.2, 7.6 or 3.8 mg/kg IMAB362-DM4, 16, 8 or 4 mg/kg IMAB362-vcMMAE, vehicle administered as single bolus IV injections or with repeated doses of 8 mg/kg IMAB362 (twice a week, IV/i.p.).
IMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibited tumor growth, mediated tumor regression and prolonged survival of tumor bearing mice in a dose dependent manner. In contrast, unconjugated IMAB362 did not exhibit statistically significant anti-tumoral activities in this advanced tumor model (Figure 20). Both IMAB362 toxin-conjugated antibodies highly significantly prolonged survival of tumor bearing mice (median survival: 48 days in the vehicle group compared to 98.5 days in the ΓΜΑΒ362- vcMMAE 16 mg/kg and 81 days in the IMAB362-DM4 15.2 mg/kg group) (Figure 20).
Treatment of early human DAN-G 1C5F2 pancreatic xenograft tumors:
The anti-tumoral activity of IMAB362-DM4 and IMAB362-vcMMAE in vivo was tested in mice subcutaneously engrafted with DAN-G 1C5F2 pancreatic carcinoma cells endogenously expressing CLDN18.2. DAN-G 1C5F2 cells have only extremely low amounts of CLDN18.2 on the cell surface; although considerable amounts of protein or RNA can be detected by immunoblot or qRT-PCR. IHC analyses of DAN-G 1CSF2 xenograft tumors demonstrated that only a subpopulation of tumor cells showed moderate to strong membrane associated CLDN18.2 staining. Therefore, DAN-G 1C5F2 xenograft tumors might be suitable for treatment with antibody drug conjugates that exhibit bystander killing. Animals were treated on day 3 post engraftment by single dose IV injection of 1S.2 mg/kg IMAB362-DM4, 16 mg/kg IMAB362- vcMMAE or vehicle control.
IMAB362-DM4 and IMAB362-vcMMAE highly significantly inhibited tumor growth and prolonged survival of tumor bearing mice compared to the vehicle control (Figure 21). In the majority of mice (> 50%) tumor growth was completely prevented. After the observation period of 120 days, 2 out of 7 animals in the IMAB362-DM4 (median survival 87 days, p=0.0002) and 4 out 7 animals in the IMAB362-vcMMAE treatment group were still alive (survival undefined, p=0.0006), whereas all animals of the vehicle group had to be euthanized within 31 days due to abort criteria such as cancer cachexia (median survival 24 days) (Figure 21). Both, IMAB362- DM4 and IMAB362-vcMMAE significantly inhibiting tumor growth and prolonging survival of mice with xenograft tumors exhibiting heterogeneous CLDN18.2 expression.
In summary, tumors with low and/or heterogeneous expression of CLDN18.2 (e.g. NUGC-4 and DAN-G xenograft tumors) can be efficiently treated with IMAB362-DM4 or IMAB362- vcMMAE and a large part of tumor-bearing animals were cured. The anti-tumoral activities of both ADCs can be explained on the basis of the bystander effect: The release of cell membrane- permeable forms of DM4 and MMAE after cellular processing facilitates the killing of neighboring tumor cells even if they are target negative. Therefore, both ADCs are highly effective in eradicating tumors containing only fractions of CLDN18.2 positive cells.
EXAMPLE 7: INDUCTION OF APOPTOSIS
The cytotoxicity of toxin-conjugated IMAB362 was evaluated by apoptosis assays measuring caspase 3/7 activity and the extemalization of phosphatidylserine. Caspase activation represents one of the earliest measurable markers of apoptosis which is important for the initiation of programed cell death (Henkart 1996). Caspase 3/7 activity was determined in a luciferase-based assay by the cleavage of a caspase 3/7 specific pro-luminogenic substrate. Another early event in apoptosis was monitored by flow cytometry using fluorescence-conjugated annexin V (Vermes et al. 199S). Annexin V specifically binds to phosphatidylserine which is translocated from the inner leaflet of the plasma membrane to the outer leaflet immediately after the induction of apoptosis. To discriminate between living and dead cells, cells are co-stained with the DNA dye propidium iodide (PI).
To analyze induction of apoptosis, CLDN18.2 positive NUGC4 cells were treated with a single dose of IMAB362-toxin conjugates for several days. Untreated cells and cells treated with non- conjugated IMAB362 served as controls (Figure 23). After 3 days, cells treated with IMAB362- DM4 or IMAB362-VCMMAE showed increased caspase 3/7 activities whereas incubation with the naked antibody did not influence caspase activity (Figure 23A). Co- staining with annexin V and PI was used as an independent parameter to verify the induction of apoptosis by toxin- conjugated IMAB362 antibodies. 4 days after treatment, -50% of the cells treated with IMAB362-DM4- or IMAB362-vcMMAE were found to be annexin V or annexin V/PI positive, indicating that cell death occurred via induction of apoptosis. In contrast, naked IMAB362 without cross-linking does not induce apoptosis in the concentration range applied (Figure 23B). In summary, treatment of CLDN18.2 positive tumor cells with IMAB362 conjugated to DM4 or vcMMAE induces apoptosis.
EXAMPLE 8: TREATMENT OF ADVANCED HUMAN NUGC-4 10CF7-5 SORT3A GASTRIC XENOGRAFT TUMORS
The anti-tumoral efficacy of HMAB362-DM4 and IMAB362-vcMMAE was analyzed in mice subcutaneously engrafted with NUGC-4 10cF7-5 sort3a gastric carcinoma cells endogenously expressing CLDN18.2. Animals with advanced tumors (tumor size of -200 mm3) were treated on day 10 post engraftment by IV injection of 15.2 mg/kg IMAB362-DM4, 16 mg/kg IMAB362- vcMMAE or vehicle control and after recurrence of tumors in the IMAB362 conjugate treated groups by a second injection of the respective drug (day 38).
IMAB362-DM4 and IMAB362-vcMMAE significantly inhibited tumor growth and mediated tumor regression in all treated animals (day 52) while all mice of the control group developed tumors (IMAB362-DM4: p<0.05; IMAB362-vcMMAE: p<0.001) (Figure 24). 28 days after therapy (day 38 post engraftment) recurrent tumor growth (tumor size >~100mm3) was observed in 50% of the animals of the IMAB362-DM4 treated group. The second injection of the respective IMAB362-DM4 and IMAB362-vcMMAE again resulted in partial or complete remission of the tumors. Recurrent tumor growth finally was observed in 7 out of 8 animals in the IMAB362-DM4 group and 4 out of 8 animals in the IMAB362-vcMMAE group. After the pre-defined time point of treatment end (day 108 post graft), 4 out 8 animals in the IMAB362- vcMMAE group and one animal in the IMAB362-DM4 and IMAB362 group were alive while all animals of the vehicle group died latest on day 52 post engraftment (median survival 32.S days for vehicle, 90 days for IMAB362-DM4 (p<0.0003 vs vehicle) and undefined for IMAB362-VCMMAE (p<0.0003 vs vehicle)) (Figure 24).
Figure imgf000100_0001
New International Patent Application
Ganymed Pharmaceuticals AG, et al.
„DRUG CONJUGATES COMPRISING ANTIBODIES AGAINST CLAUDIN 18.2'
Our Ref.: 342-84
Additional Sheet for Biological Material
Identification of further deposits:
1) The Name and Address of depositary institution for the deposits (DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748) are:
DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH Mascheroder Weg lb
38124 Braunschweig
DE
2) The Name and Address of depositary institution for the deposits (DSM ACC2808, DSM ACC2809, DSM ACC2810) are:
DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH Inhoffenstr. 7 B
38124 Braunschweig
DE
Figure imgf000101_0001
30 Additional Indications for all above mentioned deposits:
Mouse (Mus musculus) myeloma P3X63Ag8U.l fused with mouse (Mus musculus) splenocytes
Hybridoma secreting antibody against human claudin- 18 A2
3) Depositor:
10
All above mentioned depositions were made by:
Ganymed Pharmaceuticals AG
Freiligrathstrasse 12
55131 Mainz
DE

Claims

1. A method of treating or preventing a CLDN18.2-expressing cancer comprising administering an antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety to a cancer patient.
2. The method of claim 1 , wherein the antibody-drug conjugate is internalized into cells.
3. The method of claim 1 or 2, wherein the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2.
4. The method of any one of claims 1 to 3, wherein the antibody-drug conjugate specifically binds to CLDN18.2.
5. The method of any one of claims 1 to 4, wherein the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody.
6. The method of any one of claims 1 to 5, wherein the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2.
7. The method of any one of claims 1 to 6, wherein the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
8. The method of any one of claims 1 to 7, wherein the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i).
9. The method of any one of claims 1 to 8, wherein the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment.
10. The method of any one of claims 1 to 8, wherein the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment.
11. The method of any one of claims 1 to 8, wherein the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2- binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
12. The method of any one of claims 1 to 8, wherein the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2- binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
13. The method of any one of claims 1 to 12, wherein the toxin drug moiety is cell membrane-permeable.
14. The method of any one of claims 1 to 13, wherein the toxin drug moiety is a cytotoxic or cytostatic agent.
15. The method of any one of claims 1 to 14, wherein the toxin drug moiety is a maytansinoid or an auri statin.
16. The method of claim IS, wherein the maytansinoid is selected from the group consisting of DM1 and DM4.
17. The method of claim 15, wherein the auri statin is selected from the group consisting of monomethyl auri statin E (MMAE) and monomethyl auri statin F (MMAF).
18. The method of any one of claims 1 to 17, wherein the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker.
19. The method of claim 18, wherein the linker is a cleavable linker.
20. The method of claim 18 or 19, wherein the linker is cleavable under intracellular conditions.
21. The method of any one of claims 18 to 20, wherein the linker is hydrolyzable at a pH of less than 5.5.
22. The method of any one of claims 18 to 21, wherein the linker is cleavable by an intracellular protease.
23. The method of any one of claims 18 to 22, wherein the linker is a cathepsin-cleavable linker.
24. The method of any one of claims 18 to 23, wherein the linker comprises a dipeptide.
25. The method of claim 24, wherein the dipeptide is val-cit or phe-lys.
26. The method of any one of claims 1 to 25, wherein the antibody-drug conjugate is administered in an amount effective for the treatment or prevention of the CLDN18.2- expressing cancer.
27. The method of any one of claims 1 to 26, wherein the antibody-drug conjugate is administered at a dose of between 3 to 30 mg/kg body weight.
28. The method of any one of claims 1 to 26, wherein the antibody-drug conjugate is administered at a dose of between 9 to 90 mg/m2 body surface of a human patient.
29. The method of any one of claims 1 to 28, wherein a single dose of the antibody-drug conjugate or two or more doses of the antibody-drug conjugate are administered.
30. The method of any one of claims 1 to 29, wherein the antibody-drug conjugate is administered by intravenous injection.
31. The method of any one of claims 1 to 30 which further comprises administering surgery, chemotherapy and/or radiation therapy.
32. The method of any one of claims 1 to 31, wherein expression of CLDN18.2 is at the cell surface of cancer cells.
33. The method of any one of claims 1 to 32, wherein the cancer is an adenocarcinoma, in particular an advanced adenocarcinoma.
34. The method of any one of claims 1 to 33, wherein the cancer is selected from the group consisting of gastric cancer, esophageal cancer, pancreatic cancer, lung cancer such as non small cell lung cancer (NSCLC), breast cancer, ovarian cancer, colon cancer, hepatic cancer, head-neck cancer, cancer of the gallbladder and the metastasis thereof, a Krukenberg tumor, peritoneal metastasis and/or lymph node metastasis.
35. The method of any one of claims 1 to 34, wherein the cancer is selected from the group consisting of cancer of the stomach, cancer of the esophagus, in particular the lower esophagus, cancer of the eso-gastric junction and gastroesophageal cancer.
36. The method of any one of claims 1 to 35, wherein the patient is a HER2/neu negative patient or a patient with HER2/neu positive status but not eligible to trastuzumab therapy.
37. The method of any one of claims 1 to 36, wherein CLDN18.2 has the amino acid sequence according to SEQ ID NO: 1.
38. An antibody-drug conjugate comprising an antibody having the ability of binding to CLDN18.2 covalently attached to at least one toxin drug moiety.
39. The antibody-drug conjugate of claim 38, which is internalized into cells.
40. The antibody-drug conjugate of claim 38 or 39, wherein the antibody having the ability of binding to CLDN18.2 specifically binds to CLDN18.2.
41. The antibody-drug conjugate of any one of claims 38 to 40, wherein the antibody-drug conjugate specifically binds to CLDN18.2.
42. The antibody-drug conjugate of any one of claims 38 to 41, wherein the antibody having the ability of binding to CLDN18.2 is a monoclonal antibody.
43. The antibody-drug conjugate of any one of claims 38 to 42, wherein the antibody having the ability of binding to CLDN18.2 binds to an extracellular domain of CLDN18.2.
44. The antibody-drug conjugate of any one of claims 38 to 43, wherein the antibody having the ability of binding to CLDN18.2 binds to the first extracellular loop of CLDN18.2.
45. The antibody-drug conjugate of any one of claims 38 to 44, wherein the antibody having the ability of binding to CLDN18.2 is an antibody selected from the group consisting of (i) an antibody produced by and/or obtainable from a clone deposited under the accession no. DSM ACC2737, DSM ACC2738, DSM ACC2739, DSM ACC2740, DSM ACC2741, DSM ACC2742, DSM ACC2743, DSM ACC2745, DSM ACC2746, DSM ACC2747, DSM ACC2748, DSM ACC2808, DSM ACC2809, or DSM ACC2810, (ii) an antibody which is a chimerized or humanized form of the antibody under (i), (iii) an antibody having the specificity of the antibody under (i) and (iv) an antibody comprising the antigen binding portion or antigen binding site, in particular the variable region, of the antibody under (i) and preferably having the specificity of the antibody under (i).
46. The antibody-drag conjugate of any one of claims 38 to 45, wherein the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment.
47. The antibody-drug conjugate of any one of claims 38 to 45, wherein the antibody having the ability of binding to CLDN18.2 comprises a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment.
48. The antibody-drug conjugate of any one of claims 38 to 45, wherein the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 32 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 39 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
49. The antibody-drag conjugate of any one of claims 38 to 45, wherein the antibody having the ability of binding to CLDN18.2 recognizes the same or essentially the same epitope as a CLDN18.2-binding antibody comprising a heavy chain comprising an amino acid sequence represented by SEQ ID NO: 30 or a fragment thereof or a variant of said amino acid sequence or fragment and a light chain comprising an amino acid sequence represented by SEQ ID NO: 35 or a fragment thereof or a variant of said amino acid sequence or fragment, and/or competes with said CLDN18.2-binding antibody for binding to CLDN18.2.
50. The antibody-drug conjugate of any one of claims 38 to 49, wherein the toxin drug moiety is cell membrane-permeable.
51. The antibody-drug conjugate of any one of claims 38 to 50, wherein toxin drug moiety is a cytotoxic or cytostatic agent.
52. The antibody-drug conjugate of any one of claims 38 to 51, wherein the toxin drug moiety is a maytansinoid or an auristatin.
53. The antibody-drug conjugate of claim 52, wherein the maytansinoid is selected from the group consisting of DM1 and DM4.
54. The antibody-drug conjugate of claim 52, wherein the auristatin is selected from the group consisting of monomethyl auristatin E (MMAE) and monomethyl auristatin F (MMAF).
55. The antibody-drug conjugate of any one of claims 38 to 54, wherein the antibody having the ability of binding to CLDN18.2 is covalently attached to the toxin drug moiety by a linker.
56. The antibody-drug conjugate of claim 55, wherein the linker is a cleavable linker.
57. The antibody-drug conjugate of claim 55 or 56, wherein the linker is cleavable under intracellular conditions.
58. The antibody-drug conjugate of any one of claims 55 to 57, wherein the linker is hydrolyzable at a pH of less than 5.5.
59. The antibody-drug conjugate of any one of claims 55 to 58, wherein the linker is cleavable by an intracellular protease.
60. The antibody-drug conjugate of any one of claims 55 to 59, wherein the linker is a cathepsin-cleavable linker.
61. The antibody-drug conjugate of any one of claims 55 to 60, wherein the linker comprises a dipeptide.
62. The antibody-drug conjugate of claim 61 , wherein the dipeptide is val-cit or phe-lys.
63. A pharmaceutical formulation comprising the antibody drug conjugate of any one of claims 38 to 62, and a pharmaceutically acceptable diluent, carrier or excipient.
64. A medical preparation comprising the antibody drug conjugate of any one of claims 38 to 62.
65. The medical preparation of claim 64 which is present in the form of a kit comprising a container including the antibody drug conjugate.
66. The antibody drug conjugate of any one of claims 38 to 62, the pharmaceutical composition of claim 63 or the medical preparation of claim 64 or 65 for use in therapy, in particular for use in a method of treating or preventing cancer, in particular a CLDN18.2- expressing cancer.
67. The medical preparation of any one of claims 64 to 66 further including printed instructions for use of the preparation in a method of treating or preventing cancer, in particular a CLDN18.2-expressing cancer.
68. The antibody drug conjugate or the pharmaceutical composition of claim 66 or the medical preparation of claim 66 or 67, wherein the method of treating or preventing cancer is a method of any one of claims 1 to 37.
PCT/EP2015/058206 2015-04-15 2015-04-15 Drug conjugates comprising antibodies against claudin 18.2 WO2016165762A1 (en)

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BR112017018521A BR112017018521A2 (en) 2015-04-15 2016-04-13 conjugates of drugs comprising antibodies to claudin18.2
IL254085A IL254085B1 (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
CA2982401A CA2982401C (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
US15/565,848 US11541127B2 (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
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CN201680021997.6A CN107667118A (en) 2015-04-15 2016-04-13 Include the drug conjugate of the antibody for sealing protein 18 .2
HRP20231609TT HRP20231609T1 (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
KR1020247001267A KR20240011250A (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
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KR1020177029588A KR102336566B1 (en) 2015-04-15 2016-04-13 Drug Conjugates Comprising Antibodies to Claudin 18.2
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DK16715583.7T DK3283521T5 (en) 2015-04-15 2016-04-13 DRUG CONJUGATES INCLUDING ANTIBODIES TO CLAUDIN 18.2
SG11201708271TA SG11201708271TA (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
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RS20231193A RS64951B1 (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
PT167155837T PT3283521T (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
HUE16715583A HUE064753T2 (en) 2015-04-15 2016-04-13 Drug conjugates comprising antibodies against claudin 18.2
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