WO2015184249A3 - Sle and sle-related disease-associated risk markers and uses thereof - Google Patents

Sle and sle-related disease-associated risk markers and uses thereof Download PDF

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Publication number
WO2015184249A3
WO2015184249A3 PCT/US2015/033161 US2015033161W WO2015184249A3 WO 2015184249 A3 WO2015184249 A3 WO 2015184249A3 US 2015033161 W US2015033161 W US 2015033161W WO 2015184249 A3 WO2015184249 A3 WO 2015184249A3
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WO
WIPO (PCT)
Prior art keywords
sle
related disease
risk markers
subjects
associated risk
Prior art date
Application number
PCT/US2015/033161
Other languages
French (fr)
Other versions
WO2015184249A2 (en
Inventor
Sergey Kozyrev
Göran Andersson
Helene HANSSON-HAMLIN
Kerstin Lindblad-Toh
Maria WILBE
Original Assignee
The Broad Institute, Inc.
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Publication date
Application filed by The Broad Institute, Inc. filed Critical The Broad Institute, Inc.
Publication of WO2015184249A2 publication Critical patent/WO2015184249A2/en
Publication of WO2015184249A3 publication Critical patent/WO2015184249A3/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Pathology (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)

Abstract

Provided herein are methods and compositions for identifying subjects, including canine subjects, as having an elevated risk of developing systemic lupus erythematosus (SLE) or an SLE-related immune-mediated rheumatic disorder, such as IMRD or SRMA, or having undiagnosed SLE or an SLE-related immune-mediated rheumatic disorder, such as IMRD or SRMA. These subjects are identified based on the presence of germ-line risk markers.
PCT/US2015/033161 2014-05-30 2015-05-29 Sle and sle-related disease-associated risk markers and uses thereof WO2015184249A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201462005828P 2014-05-30 2014-05-30
US62/005,828 2014-05-30

Publications (2)

Publication Number Publication Date
WO2015184249A2 WO2015184249A2 (en) 2015-12-03
WO2015184249A3 true WO2015184249A3 (en) 2016-01-28

Family

ID=54700068

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2015/033161 WO2015184249A2 (en) 2014-05-30 2015-05-29 Sle and sle-related disease-associated risk markers and uses thereof

Country Status (1)

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WO (1) WO2015184249A2 (en)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN111518885A (en) * 2020-04-22 2020-08-11 深圳市福田区风湿病专科医院 Method for detecting mutation sites of systemic lupus erythematosus genes
US11978532B2 (en) 2020-04-30 2024-05-07 Optum Services (Ireland) Limited Cross-variant polygenic predictive data analysis
US11610645B2 (en) 2020-04-30 2023-03-21 Optum Services (Ireland) Limited Cross-variant polygenic predictive data analysis
US11482302B2 (en) 2020-04-30 2022-10-25 Optum Services (Ireland) Limited Cross-variant polygenic predictive data analysis
US11574738B2 (en) 2020-04-30 2023-02-07 Optum Services (Ireland) Limited Cross-variant polygenic predictive data analysis
US11967430B2 (en) 2020-04-30 2024-04-23 Optum Services (Ireland) Limited Cross-variant polygenic predictive data analysis

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
JOKINEN, P.: "Identifying Genetic Risk Factors In Canine Autoimmune Disorders.", ACADEMIC DISSERTATION., 28 January 2011 (2011-01-28), Retrieved from the Internet <URL:https://helda.helsinki.fi/bitstream/handle/10138/24488/identify.pdf> [retrieved on 20151008] *
TRUVE, K.: "Bioinformatics Mining For Disease Causing Mutations: Using The Dog Genome As A Model For Human Disease.", DOCTORAL THESIS., 2012, Retrieved from the Internet <URL:http://hunddna.slu.selartikelserie/truve_k_120920.pdf> [retrieved on 20151008] *
WILBE, M ET AL.: "Genome-Wide Association Mapping Identifies Multiple Loci For A Canine SLE-Related Disease Complex.", NAT GENET., vol. 42, no. 3, March 2010 (2010-03-01), pages 250 - 254 *
WILBE, M.: "Discovery Of A Novel Pathway For An SLE-Related Disease Complex In The Canine Breed Nova Scotia Duck Tolling Retriever.", SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES UPPSALA. DOCTORAL THESIS., 2013, Retrieved from the Internet <URL:http://pub.epsilon.siu.se/10229/1/wilbe_m_130415.pdf> [retrieved on 20151008] *

Also Published As

Publication number Publication date
WO2015184249A2 (en) 2015-12-03

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