WO2015104844A1 - Mass-spectrometry-data processing method and mass-spectrometry-data processing device - Google Patents

Mass-spectrometry-data processing method and mass-spectrometry-data processing device Download PDF

Info

Publication number
WO2015104844A1
WO2015104844A1 PCT/JP2014/050367 JP2014050367W WO2015104844A1 WO 2015104844 A1 WO2015104844 A1 WO 2015104844A1 JP 2014050367 W JP2014050367 W JP 2014050367W WO 2015104844 A1 WO2015104844 A1 WO 2015104844A1
Authority
WO
WIPO (PCT)
Prior art keywords
mass
analysis
spectrum
compound
ions
Prior art date
Application number
PCT/JP2014/050367
Other languages
French (fr)
Japanese (ja)
Inventor
雄太郎 山村
Original Assignee
株式会社島津製作所
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by 株式会社島津製作所 filed Critical 株式会社島津製作所
Priority to PCT/JP2014/050367 priority Critical patent/WO2015104844A1/en
Publication of WO2015104844A1 publication Critical patent/WO2015104844A1/en

Links

Images

Classifications

    • HELECTRICITY
    • H01ELECTRIC ELEMENTS
    • H01JELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
    • H01J49/00Particle spectrometers or separator tubes
    • H01J49/0027Methods for using particle spectrometers
    • H01J49/0036Step by step routines describing the handling of the data generated during a measurement

Definitions

  • the present invention relates to a data processing method and a data processing apparatus for processing mass spectrometry data obtained by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more).
  • MS / MS analysis (also referred to as tandem analysis) is one of mass spectrometry techniques used to identify an analysis target compound in a sample.
  • CID collision-induced dissociation
  • the precursor ion does not cleave to a product ion having a small mass-to-charge ratio in one CID, and MS 2 that can be collated with the mass spectrum of the reference compound. Often a spectrum cannot be obtained. In such a case, analysis of MS 3 or higher is performed in which CID is repeated a plurality of times to generate and analyze product ions having a small mass-to-charge ratio.
  • MS n is an integer of 2 or more
  • MS k is an integer of 1 or more and less than n
  • a function (automatic MS n analysis) that automatically selects ions corresponding to a mass peak satisfying a predetermined selection condition (peak intensity is a predetermined value or more) from a plurality of mass peaks as a precursor ion and performs MS k + 1 analysis.
  • a predetermined selection condition peak intensity is a predetermined value or more
  • the ion corresponding to the mass peak is a background ion (such as an ion generated from a mobile phase in a liquid chromatograph or an ion generated from a contaminating component).
  • a background ion such as an ion generated from a mobile phase in a liquid chromatograph or an ion generated from a contaminating component.
  • the problem to be solved by the present invention is obtained by performing MS k analysis (k is an integer of 1 or more and less than n) by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more).
  • a mass spectrometry data processing method and apparatus capable of efficiently collecting a mass spectrum of an unknown compound when automatically selecting a precursor ion based on a k spectrum and performing MS k + 1 analysis on the precursor ion. Is to provide.
  • the first aspect of the mass spectrometry data processing method according to the present invention which has been made to solve the above-mentioned problems, is the use of a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more) of the compound to be analyzed.
  • the mass spectrometry data processing method when an analyst designates a reference compound, ions corresponding to a set of mass-to-charge ratios associated with the reference compound are collectively set as excluded ions. Therefore, not only background ions but also many ions generated from registered compounds can be registered as excluded ions, and mass spectra concerning unknown compounds can be efficiently collected.
  • the predetermined selection condition may be, for example, that the intensity of mass peaks is equal to or greater than a predetermined value, or that a predetermined number of mass peaks are selected in descending order of intensity.
  • the second aspect of the mass spectrometry data processing method according to the present invention which has been made to solve the above-mentioned problems, is the use of a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more) of the compound to be analyzed.
  • a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound is created in advance for a plurality of reference compounds, and each corresponds to a plurality of mass peaks of the mass spectrum of the reference compound and the reference compound.
  • the reference compound information matched with the mass-to-charge ratio pair to be matched b) determining whether the plurality of mass-to-charge ratio pairs of the analyte compound includes a mass-to-charge ratio pair associated with any of the plurality of reference compounds; c) As a result of the determination, when the plurality of mass-to-charge ratio sets of the analysis target compound does not include any of the plurality of mass-to-charge ratio sets associated with each of the plurality of reference compounds, the MS A precursor ion is selected by extracting a mass peak satisfying a predetermined selection condition from a plurality of mass peaks on the k spectrum.
  • the set of mass to charge ratios respectively corresponding to the plurality of mass peaks of the MS k spectrum of the analysis target compound includes the set of mass to charge ratios corresponding to the reference compound. If the mass spectrum of the reference compound does not exist, a precursor ion is selected and an MS k + 1 spectrum is acquired. Therefore, it is possible to efficiently acquire a mass spectrum related to an unknown compound.
  • the conventionally used mass spectrum matching method takes time because the similarity is determined by comparing the position and intensity of each mass peak of the mass spectrum. Therefore, after acquiring the MS n spectrum, it was necessary to collate with the mass spectrum of the reference compound.
  • the mass spectrum can be collated at high speed, so that the mass spectrum can be collated while proceeding with MS n analysis.
  • the first aspect of the mass spectrometry data processing apparatus has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and MS k analysis (k is 1 or more) of the analysis target compound.
  • a mass spectrometric data processing apparatus that automatically selects a precursor ion based on an MS k spectrum obtained by performing an MS k + 1 analysis on the precursor ion; a) a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound; b) a display to present the required information to the analyst; c) a reference compound information presentation unit that presents the reference compound information on a screen of the display unit and allows an analyst to select one or more reference compounds; d) an excluded ion setting unit that sets a plurality of mass-to-charge ratios respectively corresponding to the selected one or more reference
  • a second aspect of the mass spectrometry data processing apparatus which has been made to solve the above problems, has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and A mass spectrometry data processing apparatus that automatically selects a precursor ion based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) and performs MS k + 1 analysis on the precursor ion.
  • a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound; b) a mass-to-charge ratio matching unit that matches a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound with the reference compound information; c) As a result of the collation, when the plurality of mass-to-charge ratio sets of the analysis target compound include a set of mass-to-charge ratios associated with any of the plurality of reference compounds, the MS k spectrum A precursor ion selector that selects a precursor ion by extracting a mass peak satisfying a predetermined selection condition from the plurality of mass peaks; It is characterized by providing.
  • FIG. 1 is a diagram showing a configuration in which the mass spectrometry data processing apparatus of this embodiment is combined with a liquid chromatograph mass spectrometer.
  • the mass spectrometric data processing apparatus of this embodiment controls the operation of a liquid chromatograph mass spectrometer (LC / MS) configured by combining a liquid chromatograph part (not shown) and the mass spectroscope part 1 to control various kinds of samples in a sample. It is a device that performs mass analysis of components and processes data acquired thereby. Specifically, the data processing unit 4 described later corresponds to the mass spectrometry data processing apparatus in the present invention.
  • LC / MS liquid chromatograph mass spectrometer
  • the mass spectrometer 1 removes an ESI (electrospray ionization) ion source 10 that ionizes a substance in a liquid sample whose components are separated by an LC column under atmospheric pressure, and a solvent mixed in the generated ion flow and ion
  • ESI electrospray ionization
  • a heated capillary tube 11 that guides ions into a vacuum chamber (not shown), an ion transport optical system 12 for converging ions to the subsequent stage, a three-dimensional quadrupole ion trap 13, and the ion trap 13
  • a time-of-flight mass analyzer (TOFMS) 14 that mass-separates various ions released from the time of flight, and a detector 15 that detects ions mass-separated by the TOFMS 14.
  • TOFMS time-of-flight mass analyzer
  • the detection signal from the detector 15 is input to the data processing unit 4 and converted into digital data by an A / D converter (not shown), and then predetermined data processing is executed.
  • the data processing unit 4 includes functional blocks of a reference compound information presentation unit 42, an excluded ion setting unit 43, a mass-to-charge ratio matching unit 44, and a precursor ion selection unit 45. Moreover, it is comprised so that a predetermined
  • an input unit 6 and a display unit 7 as a user interface are connected to the data processing unit 4.
  • the function of the data processing unit 4 can be realized by a personal computer equipped with dedicated control / processing software.
  • CID gas can be introduced into the ion trap 13 from the outside in accordance with an instruction from the control unit 5, and after selectively capturing ions having a specific mass-to-charge ratio in the ion trap 13, the CID gas Is introduced, and the captured ions are resonantly excited by a high-frequency electric field (this is referred to as “CID operation”) so that the ions collide with the CID gas and can be cleaved. Furthermore, by repeating the selection of ions and the CID operation, the ions can be cleaved into a plurality of stages, and fragment ions (fragment ions) having a small mass-to-charge ratio can be generated. That is, the mass spectrometer 1 is a mass spectrometer capable of MS n analysis.
  • the storage unit 41 stores a compound database.
  • the compound database includes compound names, molecular weights, composition formulas, chemical structural formulas, and the like of various compounds.
  • PubChem managed by the National Center for Biotechnology Information in the United States can be used.
  • the compound database 26 is not limited to this.
  • the compound database 26 may be constructed by the user himself or a combination of an existing database and a user database.
  • the compound database constructed by the user himself is created based on theoretical information regarding the molecular weight of various compounds. Specifically, compound molecular ions (including those with different valences and those with different polarities), fragment ions generated by cleavage of molecular ions, or adduct ions with water molecules added to them It is information created theoretically.
  • the reference compound information presentation unit 42 When MS n analysis of the sample is indicated by the analyst, before starting the measurement by introducing a sample into LC / MS, the reference compound information presentation unit 42, the reference compounds which are registered in the compound database trout The spectrum is displayed on the display unit 7 and presented to the analyst (step S1, see FIG. 3).
  • the excluded ion setting unit 43 When one or more compounds are selected from the reference compound by the analyst, the excluded ion setting unit 43 collectively selects ions having a mass-to-charge ratio corresponding to each peak of the mass spectrum of the compound as excluded ions.
  • Set Conventionally, an analyst has to input mass-to-charge ratios individually and set exclusion ions one by one, but in this example, when an analyst selects a reference compound, it is associated with the compound. Ions are collectively set as excluded ions.
  • step S2 When step S2 is completed, a signal for instructing the start of measurement is transmitted to the control unit 5, a sample is introduced into the LC / MS under the control of the control unit 5, and mass spectrometry (MS 1 analysis) is performed. (Step S3). Further, as will be described later, MS 2 analysis to MS n analysis are further performed as necessary. Data obtained by these analyzes is stored in the storage unit 41.
  • the mass-to-charge ratio collation unit 44 collates the mass peak of the spectrum with the mass spectrum of the reference compound registered in the compound database. This collation is performed as follows.
  • the mass-to-charge ratio matching unit 44 extracts position information (mass-to-charge ratio) of each peak of the acquired MS 1 spectrum, and generates matching mass spectrum data having a constant value as shown in FIG. . Similarly, position information of each peak is extracted from the mass spectrum of the reference compound (step S4). Then, the matching mass spectrum data obtained from the sample and the matching mass spectrum data created for the reference compound are collated by an AND operation to determine whether or not they match (see FIG. 6). Conventionally, when comparing the mass spectrum obtained for a sample with the mass spectrum of the reference compound, the position information and intensity information of each peak of the mass spectrum are individually verified, and the similarity of the mass spectrum is obtained from the verification results for all peaks. It took a long time because it was determined to be matched / mismatched, and the spectrum could not be verified in parallel with the measurement. However, in the method of this example, the mass spectrum was verified at high speed, and the result was MS n Reflect in measurement.
  • the precursor ion selection unit 45 removes the mass peak corresponding to the previously set excluded ion from the mass peaks of the MS 1 spectrum. A mass peak that satisfies the selection conditions is extracted, and ions corresponding to the mass peak are selected as precursor ions (step S6).
  • the predetermined condition here is, for example, to have an intensity equal to or higher than a preset threshold. Other predetermined conditions may include selecting a preset number of mass peaks in descending order of intensity.
  • an MS 2 spectrum is acquired under the control of the control unit 5 (step S3). Then, by comparing with the mass spectrum of the reference compound in the same procedure as described above, the coincidence / non-coincidence is determined. If the mass spectrum of the coincident reference compound does not exist (NO in step S5), a precursor ion is further selected. Repeat the process of acquiring the MS 3 spectrum. Then, when there is no precursor ion to be selected for the component under analysis, the mass analysis for the component is terminated, and when a new component is introduced from the liquid chromatograph, the mass analysis of the component is started. In the second and subsequent verifications, since a verification mass spectrum related to the reference compound already exists, the step of generating this is omitted, and a new verification mass spectrum is generated only from the mass spectrum obtained for the sample.
  • the MS k spectrum (k is an integer of 1 or more and less than n) obtained by measurement is compared with the mass spectrum of the reference compound to determine match / mismatch, Based on this, a precursor ion for acquiring the MS k + 1 spectrum is selected. Therefore, a mass spectrum related to an unknown compound that is not registered in the compound database can be efficiently acquired.
  • the above-described embodiment is an example, and can be appropriately changed in accordance with the gist of the present invention.
  • the configuration having the characteristics in both the setting of the excluded ion based on the reference compound and the comparison of the mass spectrum of the reference compound has been described, but only one of these may be used.
  • mass spectrometry is similarly performed for MS n analysis using a gas chromatograph mass spectrometer or a mass spectrometer having no chromatograph. Data processing can be performed.
  • the AND operation is used in the comparison of the mass spectrum.
  • the present invention is not limited to this. For example, various methods such as determining the match / mismatch by checking the list of mass-to-charge ratio information are used. Can be used.

Landscapes

  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)

Abstract

In this mass-spectrometry-data processing method, in which a mass spectrometer capable of MSn analysis (n being an integer greater than or equal to 2) is used to perform MSn analysis on an analyte compound, reference-compound information that is prepared in advance for a plurality of reference compounds and associates each reference compound with a set of mass/charge ratios corresponding respectively to a plurality of mass peaks in the mass spectrum of said reference compound is presented to the operator, said operator selects one or more of the reference compounds, and the ions corresponding to the set(s) of mass/charge ratios associated with the selected reference compound(s) are all set as excluded ions. If the set of mass/charge ratios corresponding to the peaks in the MSk spectrum of the analyte compound does not include the sets of mass/charge ratios associated with the reference compounds, the aforementioned excluded ions are excluded from the mass peaks in the MSk spectrum and a precursor ion is selected.

Description

質量分析データ処理方法及び質量分析データ処理装置Mass spectrometry data processing method and mass spectrometry data processing apparatus
 本発明は、MSn分析(nは2以上の整数)を実行可能な質量分析装置により得られた質量分析データを処理するデータ処理方法及びデータ処理装置に関する。 The present invention relates to a data processing method and a data processing apparatus for processing mass spectrometry data obtained by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more).
 試料中の分析対象化合物を同定するために用いられる質量分析の手法の1つにMS/MS分析(タンデム分析ともいう。)がある。一般的なMS/MS(=MS)分析では、まず、MS分析により得られたマススペクトル(MSスペクトル)に現れる複数のマスピーク中で、信号強度が大きいマスピークに対応するイオンをプリカーサイオンとして選別する。そして、選別したプリカーサイオンを衝突誘起解離(CID:Collision Induced Dissociation)によって開裂させ、プリカーサイオンよりも質量電荷比が小さいプロダクトイオンを生成する。このときの開裂の態様は分析対象化合物の構造に依存する。そこで、開裂によって生じた種々のプロダクトイオンを質量分析してMSスペクトルを収集し、予めデータベース化された参照化合物のマススペクトルと照合して分析対象化合物を同定する。 MS / MS analysis (also referred to as tandem analysis) is one of mass spectrometry techniques used to identify an analysis target compound in a sample. In general MS / MS (= MS 2 ) analysis, first, among a plurality of mass peaks appearing in a mass spectrum (MS 1 spectrum) obtained by MS analysis, ions corresponding to mass peaks having a large signal intensity are used as precursor ions. Sort out. Then, the selected precursor ions are cleaved by collision-induced dissociation (CID) to generate product ions having a mass-to-charge ratio smaller than that of the precursor ions. The mode of cleavage at this time depends on the structure of the compound to be analyzed. Therefore, MS 2 spectra are collected by mass analysis of various product ions generated by cleavage, and the analysis target compound is identified by collating with a mass spectrum of a reference compound stored in advance in a database.
 分析対象化合物が分子量が大きい化合物や開裂しにくい化合物である場合には、一回のCIDではプリカーサイオンが質量電荷比の小さなプロダクトイオンまで開裂せず、参照化合物のマススペクトルと照合可能なMSスペクトルを得ることができないことが多い。このような場合には、CIDを複数回繰り返して質量電荷比の小さなプロダクトイオンを生成して分析する、MS以上の分析が行われる。 When the compound to be analyzed is a compound having a large molecular weight or a compound that is difficult to cleave, the precursor ion does not cleave to a product ion having a small mass-to-charge ratio in one CID, and MS 2 that can be collated with the mass spectrum of the reference compound. Often a spectrum cannot be obtained. In such a case, analysis of MS 3 or higher is performed in which CID is repeated a plurality of times to generate and analyze product ions having a small mass-to-charge ratio.
 MSn(nは2以上の整数)分析を実行可能な質量分析装置の中には、分析対象化合物をMS(kは1以上n未満の整数)分析して取得したMSスペクトルの1乃至複数のマスピークの中から所定の選択条件(ピーク強度が所定値以上である等)を満たすマスピークに対応するイオンをプリカーサイオンとして自動的に選択し、MSk+1分析を実行する機能(自動MSn分析機能)を有する装置がある。 Among mass spectrometers capable of performing MS n (n is an integer of 2 or more) analysis, 1 to 1 of MS k spectra obtained by analyzing an analysis target compound by MS k (k is an integer of 1 or more and less than n). A function (automatic MS n analysis) that automatically selects ions corresponding to a mass peak satisfying a predetermined selection condition (peak intensity is a predetermined value or more) from a plurality of mass peaks as a precursor ion and performs MS k + 1 analysis. There is a device having a function).
 しかし、マスピークの強度が所定値以上のイオンであっても、該マスピークに対応するイオンがバックグラウンドイオン(液体クロマトグラフにおける移動相から生成するイオンや、夾雑成分から生成されるイオンなど)である場合には、これをプリカーサイオンとしてMSk+1分析を行っても分析対象化合物の情報は得られない。そこで、自動MSn分析機能を有する質量分析装置では、分析者が、バックグラウンドイオンを除外イオンとして設定できるようになっている。分析者により除外イオンが設定されると、上記所定の選択条件を満たすマスピークか否かに関わらず、除外イオンの質量電荷比に相当するイオンはプリカーサイオンとして選択されない。これにより、試料に含まれる成分に対するマススペクトルを効率よく収集することができる(例えば特許文献1)。 However, even if the intensity of the mass peak is a predetermined value or more, the ion corresponding to the mass peak is a background ion (such as an ion generated from a mobile phase in a liquid chromatograph or an ion generated from a contaminating component). In some cases, information on the compound to be analyzed cannot be obtained even if MS k + 1 analysis is performed using this as a precursor ion. Therefore, in a mass spectrometer having an automatic MS n analysis function, an analyzer can set background ions as excluded ions. When an analyst sets an excluded ion, an ion corresponding to the mass-to-charge ratio of the excluded ion is not selected as a precursor ion regardless of whether the mass peak satisfies the predetermined selection condition. Thereby, the mass spectrum with respect to the component contained in a sample can be collected efficiently (for example, patent documents 1).
特開2008-298427号公報JP 2008-298427 A
 ところで、試料に含まれる化合物のうち、未知の化合物については、複数回のCIDを行い、該化合物の構造を反映したMSk+1スペクトルを収集する必要があるが、既にデータベースにマススペクトルが登録されている化合物(以下、「登録済化合物」という。)についてはMSスペクトルやMSスペクトルにより同定できることが多く、MSk+1スペクトルの重要性が低い。そこで、バックグラウンドイオンだけでなく、登録済化合物から生成されるイオンも除外イオンとして設定し、試料に含まれる未知の化合物に関するマススペクトルを効率的に収集することが望ましい。しかし、データベースには、数千から数万にのぼる化合物が登録されており、また各化合物から生成されるイオンも多数、存在する。そのため、これら全てのイオンを個別に分析者が登録することはできず、未知の化合物に関するマススペクトルを効率的に収集することが難しい、という問題があった。 By the way, among the compounds contained in the sample, for unknown compounds, it is necessary to perform CID multiple times and collect MS k + 1 spectra reflecting the structure of the compounds, but the mass spectra are already registered in the database. Many of the compounds (hereinafter referred to as “registered compounds”) can be identified by MS spectrum or MS 2 spectrum, and the importance of MS k + 1 spectrum is low. Therefore, it is desirable to set not only background ions but also ions generated from registered compounds as excluded ions and efficiently collect mass spectra regarding unknown compounds contained in the sample. However, thousands to tens of thousands of compounds are registered in the database, and many ions are generated from each compound. Therefore, the analyst cannot individually register all these ions, and there is a problem that it is difficult to efficiently collect mass spectra concerning unknown compounds.
 本発明が解決しようとする課題は、MSn分析(nは2以上の整数)を実行可能な質量分析装置により、MS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する際に、未知の化合物に関するマススペクトルを効率的に収集することができる質量分析データ処理方法及び装置を提供することである。 The problem to be solved by the present invention is obtained by performing MS k analysis (k is an integer of 1 or more and less than n) by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more). A mass spectrometry data processing method and apparatus capable of efficiently collecting a mass spectrum of an unknown compound when automatically selecting a precursor ion based on a k spectrum and performing MS k + 1 analysis on the precursor ion. Is to provide.
 上記課題を解決するために成された本発明に係る質量分析データ処理方法の第1の態様は、MSn分析(nは2以上の整数)を実行可能な質量分析装置により、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理方法であって、
 a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報を分析者に提示し、
 b) 前記複数の参照化合物の中から1乃至複数の参照化合物を分析者に選択させ、
 c) 前記選択された1乃至複数の参照化合物に対応付けられた質量電荷比の組に対応する複数のイオンを一括して除外イオンに設定し、
 d) 前記MSスペクトル上の複数のマスピークの中から、前記除外イオンに対応するマスピークを除いて所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択する
 ことを特徴とする。
The first aspect of the mass spectrometry data processing method according to the present invention, which has been made to solve the above-mentioned problems, is the use of a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more) of the compound to be analyzed. A mass spectrometry data processing method for automatically selecting a precursor ion based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n), and performing MS k + 1 analysis on the precursor ion. There,
a) presenting to the analyst reference compound information prepared in advance for a plurality of reference compounds, each of which is associated with a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
b) allowing an analyst to select one or more reference compounds from the plurality of reference compounds;
c) A plurality of ions corresponding to the set of mass to charge ratios associated with the selected one or more reference compounds are collectively set as excluded ions,
d) A precursor ion is selected by extracting a mass peak satisfying a predetermined selection condition from a plurality of mass peaks on the MS k spectrum, excluding a mass peak corresponding to the excluded ion.
 上記第1の態様の質量分析データ処理方法では、分析者が参照化合物を指定すると、該参照化合物に対応付けられた質量電荷比の組に対応するイオンが一括して除外イオンに設定される。従って、バックグラウンドイオンだけでなく、登録済化合物から生成される多数のイオンも除外イオンとして登録し、未知の化合物に関するマススペクトルを効率的に収集することができる。
 なお、上記の所定の選択条件は、例えば、マスピークの強度が所定値以上であることや、強度が大きい順に所定本数のマスピークを選択すること、等とすることができる。
In the mass spectrometry data processing method according to the first aspect, when an analyst designates a reference compound, ions corresponding to a set of mass-to-charge ratios associated with the reference compound are collectively set as excluded ions. Therefore, not only background ions but also many ions generated from registered compounds can be registered as excluded ions, and mass spectra concerning unknown compounds can be efficiently collected.
The predetermined selection condition may be, for example, that the intensity of mass peaks is equal to or greater than a predetermined value, or that a predetermined number of mass peaks are selected in descending order of intensity.
 上記課題を解決するために成された本発明に係る質量分析データ処理方法の第2の態様は、MSn分析(nは2以上の整数)を実行可能な質量分析装置により、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理方法であって、
 a) 前記分析対象化合物のMSスペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組を、予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報と照合し、
 b) 前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のいずれかに対応付けられた質量電荷比の組を包含するか否かを判定し、
 c) 前記判定の結果、前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のそれぞれと対応付けられた複数の質量電荷比の組のいずれも包含しない場合に、前記MSスペクトル上の複数のマスピークの中から所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択する
 ことを特徴とする。
The second aspect of the mass spectrometry data processing method according to the present invention, which has been made to solve the above-mentioned problems, is the use of a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more) of the compound to be analyzed. A mass spectrometry data processing method for automatically selecting a precursor ion based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n), and performing MS k + 1 analysis on the precursor ion. There,
a) A set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound is created in advance for a plurality of reference compounds, and each corresponds to a plurality of mass peaks of the mass spectrum of the reference compound and the reference compound. The reference compound information matched with the mass-to-charge ratio pair to be matched,
b) determining whether the plurality of mass-to-charge ratio pairs of the analyte compound includes a mass-to-charge ratio pair associated with any of the plurality of reference compounds;
c) As a result of the determination, when the plurality of mass-to-charge ratio sets of the analysis target compound does not include any of the plurality of mass-to-charge ratio sets associated with each of the plurality of reference compounds, the MS A precursor ion is selected by extracting a mass peak satisfying a predetermined selection condition from a plurality of mass peaks on the k spectrum.
 上記第2の態様の質量分析データ処理方法では、分析対象化合物のMSスペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組が、参照化合物に対応付けられた質量電荷比の組を包含するか否かを判定し、参照化合物のマススペクトルが存在しない場合にプリカーサイオンを選択してMSk+1スペクトルを取得する。従って、未知の化合物に関するマススペクトルを効率的に取得することができる。
 従来から用いられているマススペクトルの照合方法では、マススペクトルの各マスピークの位置と強度をそれぞれ比較して類似度を判定していたため時間がかかっていた。そのため、MSスペクトルを取得し終わってから、参照化合物のマススペクトルと照合しなければならなかった。一方、本態様の方法ではマススペクトルを高速で照合できるため、MS分析を進めつつマススペクトルを照合することができる。
In the mass spectrometry data processing method according to the second aspect, the set of mass to charge ratios respectively corresponding to the plurality of mass peaks of the MS k spectrum of the analysis target compound includes the set of mass to charge ratios corresponding to the reference compound. If the mass spectrum of the reference compound does not exist, a precursor ion is selected and an MS k + 1 spectrum is acquired. Therefore, it is possible to efficiently acquire a mass spectrum related to an unknown compound.
The conventionally used mass spectrum matching method takes time because the similarity is determined by comparing the position and intensity of each mass peak of the mass spectrum. Therefore, after acquiring the MS n spectrum, it was necessary to collate with the mass spectrum of the reference compound. On the other hand, in the method according to this aspect, the mass spectrum can be collated at high speed, so that the mass spectrum can be collated while proceeding with MS n analysis.
 特に、クロマトグラフ質量分析装置により未知の化合物を質量分析する場合、クロマトグラフで時間的に他の化合物から分離された分析対象化合物が質量分析装置に導入される時間が限られている。従って、特にクロマトグラフ質量分析装置による自動MS分析において顕著な効果を奏する。 In particular, when an unknown compound is subjected to mass spectrometry using a chromatograph mass spectrometer, the time during which the analysis target compound separated from other compounds in time by the chromatograph is introduced into the mass spectrometer is limited. Therefore, there is a remarkable effect particularly in the automatic MS n analysis by the chromatograph mass spectrometer.
 また、本発明に係る質量分析データ処理装置の第1の態様は、MSn分析(nは2以上の整数)を実行可能な構成を有し、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理装置であって、
 a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報が保存された記憶部と、
 b) 分析者に所要の情報を提示する表示部と、
 c) 前記表示部の画面上に前記参照化合物情報を提示して、分析者に1乃至複数の参照化合物を選択させる参照化合物情報提示部と、
 d) 前記選択された1乃至複数の参照化合物にそれぞれ対応付けられた複数の質量電荷比を除外イオンに設定する除外イオン設定部と、
 e) 前記MSスペクトル上の複数のマスピークの中から、前記除外イオンに対応するマスピークを除いて所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択するプリカーサイオン選択部と、
 を備えることを特徴とする。
Further, the first aspect of the mass spectrometry data processing apparatus according to the present invention has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and MS k analysis (k is 1 or more) of the analysis target compound. a mass spectrometric data processing apparatus that automatically selects a precursor ion based on an MS k spectrum obtained by performing an MS k + 1 analysis on the precursor ion;
a) a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
b) a display to present the required information to the analyst;
c) a reference compound information presentation unit that presents the reference compound information on a screen of the display unit and allows an analyst to select one or more reference compounds;
d) an excluded ion setting unit that sets a plurality of mass-to-charge ratios respectively corresponding to the selected one or more reference compounds as excluded ions;
e) a precursor ion selection unit that selects a precursor ion by extracting a mass peak that satisfies a predetermined selection condition from a plurality of mass peaks on the MS k spectrum, excluding a mass peak corresponding to the excluded ion;
It is characterized by providing.
 上記課題を解決するために成された本発明に係る質量分析データ処理装置の第2の態様は、MSn分析(nは2以上の整数)を実行可能な構成を有し、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理装置であって、
 a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報が保存された記憶部と、
 b) 前記分析対象化合物のMSスペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組を、前記参照化合物情報と照合する質量電荷比照合部と、
 c) 前記照合の結果、前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のいずれかに対応付けられた質量電荷比の組を包含する場合に、前記MSスペクトル上の複数のマスピークの中から所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択するプリカーサイオン選択部と、
 を備えることを特徴とする。
A second aspect of the mass spectrometry data processing apparatus according to the present invention, which has been made to solve the above problems, has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and A mass spectrometry data processing apparatus that automatically selects a precursor ion based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) and performs MS k + 1 analysis on the precursor ion. There,
a) a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
b) a mass-to-charge ratio matching unit that matches a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound with the reference compound information;
c) As a result of the collation, when the plurality of mass-to-charge ratio sets of the analysis target compound include a set of mass-to-charge ratios associated with any of the plurality of reference compounds, the MS k spectrum A precursor ion selector that selects a precursor ion by extracting a mass peak satisfying a predetermined selection condition from the plurality of mass peaks;
It is characterized by providing.
 本発明に係る質量分析データ処理方法あるいは装置を用いることにより、MSn分析において未知の化合物に関するマススペクトルを効率的に取得することができる。 By using the mass spectrometry data processing method or apparatus according to the present invention, a mass spectrum relating to an unknown compound can be efficiently obtained in MS n analysis.
本発明に係る質量分析データ処理装置の一実施例を液体クロマトグラフ質量分析装置と組み合わせた構成について説明する図。BRIEF DESCRIPTION OF THE DRAWINGS The figure explaining the structure which combined one Example of the mass spectrometry data processing apparatus which concerns on this invention with the liquid chromatograph mass spectrometer. 本発明に係る質量分析データ処理方法の一実施例について説明するフローチャート。The flowchart explaining one Example of the mass spectrometry data processing method which concerns on this invention. 本実施例において分析者に提示する参照化合物選択画面の例。The example of the reference compound selection screen shown to an analyst in a present Example. 本実施例において取得される測定データについて説明する図。The figure explaining the measurement data acquired in a present Example. 本実施例において使用する照合用マススペクトルについて説明する図。The figure explaining the mass spectrum for collation used in a present Example. 試料の照合用マススペクトルと参照化合物の照合用マススペクトルのAND演算について説明する図。The figure explaining the AND operation | movement of the mass spectrum for the collation of a sample, and the mass spectrum for the collation of a reference compound.
 以下、本発明に係る質量分析データ処理方法及び装置の一実施例について、以下、図面を参照して説明する。図1は本実施例の質量分析データ処理装置を液体クロマトグラフ質量分析装置と組み合わせた構成を示す図である。 Hereinafter, an embodiment of a mass spectrometry data processing method and apparatus according to the present invention will be described with reference to the drawings. FIG. 1 is a diagram showing a configuration in which the mass spectrometry data processing apparatus of this embodiment is combined with a liquid chromatograph mass spectrometer.
 本実施例の質量分析データ処理装置は、液体クロマトグラフ部(図示なし)と質量分析部1を組み合わせて構成した液体クロマトグラフ質量分析装置(LC/MS)の動作を制御して試料中の各種成分の質量分析を実行するとともに、それにより取得したデータを処理する装置である。具体的には、後述するデータ処理部4が、本発明における質量分析データ処理装置に対応する。 The mass spectrometric data processing apparatus of this embodiment controls the operation of a liquid chromatograph mass spectrometer (LC / MS) configured by combining a liquid chromatograph part (not shown) and the mass spectroscope part 1 to control various kinds of samples in a sample. It is a device that performs mass analysis of components and processes data acquired thereby. Specifically, the data processing unit 4 described later corresponds to the mass spectrometry data processing apparatus in the present invention.
 まず、本実施例の質量分析データ処理装置により動作を制御する、液体クロマトグラフ質量分析装置の質量分析部1について説明する。
 質量分析部1は、LCのカラムで成分分離された液体試料中の物質を大気圧下でイオン化するESI(エレクトロスプレイイオン化)イオン源10と、生成されたイオン流に混じる溶媒を除去するとともにイオンを真空室(図示せず)内へと導く加熱キャピラリ管11と、イオンを収束させつつ後段へと送るイオン輸送光学系12と、3次元四重極型のイオントラップ13と、該イオントラップ13から放出された各種イオンをその飛行時間によって質量分離する飛行時間型質量分析器(TOFMS)14と、TOFMS14により質量分離されたイオンを検出する検出器15と、を備えている。
First, the mass spectrometer 1 of the liquid chromatograph mass spectrometer, whose operation is controlled by the mass spectrometry data processing apparatus of the present embodiment, will be described.
The mass spectrometer 1 removes an ESI (electrospray ionization) ion source 10 that ionizes a substance in a liquid sample whose components are separated by an LC column under atmospheric pressure, and a solvent mixed in the generated ion flow and ion A heated capillary tube 11 that guides ions into a vacuum chamber (not shown), an ion transport optical system 12 for converging ions to the subsequent stage, a three-dimensional quadrupole ion trap 13, and the ion trap 13 A time-of-flight mass analyzer (TOFMS) 14 that mass-separates various ions released from the time of flight, and a detector 15 that detects ions mass-separated by the TOFMS 14.
 上記検出器15による検出信号はデータ処理部4に入力され、図示しないA/D変換器でデジタルデータに変換された後に所定のデータ処理が実行される。データ処理部4は、記憶部41のほか、参照化合物情報提示部42、除外イオン設定部43、質量電荷比照合部44、プリカーサイオン選択部45の機能ブロックを有している。また、液体クロマトグラフ部と質量分析部1の各部を制御する制御部5との間で所定の信号を送受信するように構成されている。さらに、データ処理部4には、ユーザインターフェイスとしての入力部6や表示部7が接続されている。なお、データ処理部4の機能は、専用の制御・処理ソフトウエアを搭載したパーソナルコンピュータにより具現化することができる。 The detection signal from the detector 15 is input to the data processing unit 4 and converted into digital data by an A / D converter (not shown), and then predetermined data processing is executed. In addition to the storage unit 41, the data processing unit 4 includes functional blocks of a reference compound information presentation unit 42, an excluded ion setting unit 43, a mass-to-charge ratio matching unit 44, and a precursor ion selection unit 45. Moreover, it is comprised so that a predetermined | prescribed signal may be transmitted / received between the control part 5 which controls each part of a liquid chromatograph part and the mass spectrometry part 1. FIG. Furthermore, an input unit 6 and a display unit 7 as a user interface are connected to the data processing unit 4. The function of the data processing unit 4 can be realized by a personal computer equipped with dedicated control / processing software.
 また、図示しないが、制御部5による指示に従って、イオントラップ13には外部からCIDガスを導入可能であり、イオントラップ13内に特定の質量電荷比を持つイオンを選択的に捕捉した後にCIDガスを導入し、捕捉したイオンを高周波電場により共鳴励起させる(これを、「CID操作」という。)ことによって、該イオンをCIDガスに衝突させて開裂させることができるように構成されている。さらに、イオンの選択とCID操作とを繰り返すことにより、イオンを複数段に開裂させて小さな質量電荷比の断片イオン(フラグメントイオン)を生成することができる。即ち、この質量分析部1はMSn分析が可能な質量分析装置である。 Although not shown, CID gas can be introduced into the ion trap 13 from the outside in accordance with an instruction from the control unit 5, and after selectively capturing ions having a specific mass-to-charge ratio in the ion trap 13, the CID gas Is introduced, and the captured ions are resonantly excited by a high-frequency electric field (this is referred to as “CID operation”) so that the ions collide with the CID gas and can be cleaved. Furthermore, by repeating the selection of ions and the CID operation, the ions can be cleaved into a plurality of stages, and fragment ions (fragment ions) having a small mass-to-charge ratio can be generated. That is, the mass spectrometer 1 is a mass spectrometer capable of MS n analysis.
 記憶部41には、化合物データベースが保存されている。化合物データベースは、様々な化合物の化合物名、分子量、組成式、化学構造式などが収録されたものであり、例えば、米国の国立生物工学情報センターが管理するPubChem等を用いることができる。もちろん、化合物データベース26はこれに限るものではなく、一般に提供されているもののほか、ユーザ自身が構築したものでもよく、既存のデータベースとユーザデータベースとを組み合わせたものでもよい。ユーザ自身により構築される化合物データベースは、各種化合物の分子量に関する理論的な情報に基づいて作成される。具体的には、化合物の分子イオン(価数が異なるものや極性が異なるものを含む。)や分子イオンが開裂して生成されるフラグメントイオン、あるいはそれらに水分子等が付加したアダクトイオン等について理論的に作成された情報である。 The storage unit 41 stores a compound database. The compound database includes compound names, molecular weights, composition formulas, chemical structural formulas, and the like of various compounds. For example, PubChem managed by the National Center for Biotechnology Information in the United States can be used. Of course, the compound database 26 is not limited to this. In addition to those provided in general, the compound database 26 may be constructed by the user himself or a combination of an existing database and a user database. The compound database constructed by the user himself is created based on theoretical information regarding the molecular weight of various compounds. Specifically, compound molecular ions (including those with different valences and those with different polarities), fragment ions generated by cleavage of molecular ions, or adduct ions with water molecules added to them It is information created theoretically.
 次に、本実施例の質量分析データ処理装置により実行される、MS分析の手順について、図2のフローチャートを参照して説明する。 Next, the procedure of MS n analysis executed by the mass spectrometry data processing apparatus of the present embodiment will be described with reference to the flowchart of FIG.
 分析者により試料のMS分析が指示されると、LC/MSに試料を導入して測定を開始する前に、参照化合物情報提示部42は、上記化合物データベースに登録されている参照化合物のマススペクトルを表示部7に表示して分析者に提示する(ステップS1、図3参照)。分析者により、参照化合物の中から1乃至複数の化合物が選択されると、除外イオン設定部43は、その化合物のマススペクトルの各ピークに対応する質量電荷比のイオンを一括して除外イオンとして設定する(ステップS2)。従来、分析者は、質量電荷比を個別に入力し、除外イオンを1つずつ設定しなければならなかったが、本実施例では、分析者が参照化合物を選択すると、該化合物に対応付けられているイオンが一括して除外イオンとして設定される。 When MS n analysis of the sample is indicated by the analyst, before starting the measurement by introducing a sample into LC / MS, the reference compound information presentation unit 42, the reference compounds which are registered in the compound database trout The spectrum is displayed on the display unit 7 and presented to the analyst (step S1, see FIG. 3). When one or more compounds are selected from the reference compound by the analyst, the excluded ion setting unit 43 collectively selects ions having a mass-to-charge ratio corresponding to each peak of the mass spectrum of the compound as excluded ions. Set (step S2). Conventionally, an analyst has to input mass-to-charge ratios individually and set exclusion ions one by one, but in this example, when an analyst selects a reference compound, it is associated with the compound. Ions are collectively set as excluded ions.
 上記ステップS2が完了すると、制御部5に測定開始を指示する信号が送信され、制御部5による制御の下で、LC/MSに試料が導入され、質量分析(MS分析)が実行される(ステップS3)。また、後述するように、必要に応じてさらにMS分析~MS分析が実行される。これらの分析によりそれぞれ得られたデータは、記憶部41に保存される。 When step S2 is completed, a signal for instructing the start of measurement is transmitted to the control unit 5, a sample is introduced into the LC / MS under the control of the control unit 5, and mass spectrometry (MS 1 analysis) is performed. (Step S3). Further, as will be described later, MS 2 analysis to MS n analysis are further performed as necessary. Data obtained by these analyzes is stored in the storage unit 41.
 LC/MSでは、図4(a)に示すようなトータルイオンクロマトグラムが取得され、また、試料中の成分の溶出の時間内には、図4(b)に示すようなMSスペクトルや図4(c)に示すようなMSスペクトル等も得られる。 In LC / MS, a total ion chromatogram as shown in FIG. 4 (a) is obtained, and within the elution time of the components in the sample, the MS 1 spectrum and the figure as shown in FIG. 4 (b) are obtained. An MS 2 spectrum as shown in 4 (c) is also obtained.
 図4(b)に示すようなMSスペクトルを取得すると、質量電荷比照合部44は、そのスペクトルのマスピークと、化合物データベースに登録されている参照化合物のマススペクトルを照合する。この照合は次のように行われる。 When the MS 1 spectrum as shown in FIG. 4B is acquired, the mass-to-charge ratio collation unit 44 collates the mass peak of the spectrum with the mass spectrum of the reference compound registered in the compound database. This collation is performed as follows.
 質量電荷比照合部44は、取得したMSスペクトルの各ピークの位置情報(質量電荷比)を抽出して、図5に示すように、強度を一定値とする照合用マススペクトルデータを生成する。また、参照化合物のマススペクトルからも同様に、各ピークの位置情報を抽出する(ステップS4)。そして、試料から得られた照合用マススペクトルデータと参照化合物について作成した照合用マススペクトルデータをAND演算により照合し、それらの一致/不一致を判定する(図6参照)。従来、試料について得たマススペクトルを参照化合物のマススペクトルと照合する際には、マススペクトルの各ピークの位置情報と強度情報を個別に照合し、全ピークに関する照合結果からマススペクトルの類似度を判定して一致/不一致を判定していたため時間がかかり、測定と並行してスペクトルを照合することができなかったが、本実施例の方法では高速でマススペクトルを照合し、その結果をMS測定に反映する。 The mass-to-charge ratio matching unit 44 extracts position information (mass-to-charge ratio) of each peak of the acquired MS 1 spectrum, and generates matching mass spectrum data having a constant value as shown in FIG. . Similarly, position information of each peak is extracted from the mass spectrum of the reference compound (step S4). Then, the matching mass spectrum data obtained from the sample and the matching mass spectrum data created for the reference compound are collated by an AND operation to determine whether or not they match (see FIG. 6). Conventionally, when comparing the mass spectrum obtained for a sample with the mass spectrum of the reference compound, the position information and intensity information of each peak of the mass spectrum are individually verified, and the similarity of the mass spectrum is obtained from the verification results for all peaks. It took a long time because it was determined to be matched / mismatched, and the spectrum could not be verified in parallel with the measurement. However, in the method of this example, the mass spectrum was verified at high speed, and the result was MS n Reflect in measurement.
 上記の照合において、試料から得られたマススペクトルと一致する参照化合物のマススペクトルが存在する場合(ステップS5でYES)には、溶出中の成分に関する分析を終了する。一方、一致するスペクトルが存在しない場合には(ステップS5でNO)、プリカーサイオン選択部45が、MSスペクトルのマスピークの中から、先に設定された除外イオンに対応するマスピークを除いて所定の選択条件を満たすマスピークを抽出し、該マスピークに対応するイオンをプリカーサイオンとして選択する(ステップS6)。ここでいう所定の条件とは、例えば予め設定された閾値以上の強度を有することである。所定の条件としては、その他、強度が大きい順に予め設定された本数のマスピークを選択すること等、としてもよい。 In the above verification, if there is a mass spectrum of the reference compound that matches the mass spectrum obtained from the sample (YES in step S5), the analysis regarding the component being eluted is terminated. On the other hand, when there is no coincident spectrum (NO in step S5), the precursor ion selection unit 45 removes the mass peak corresponding to the previously set excluded ion from the mass peaks of the MS 1 spectrum. A mass peak that satisfies the selection conditions is extracted, and ions corresponding to the mass peak are selected as precursor ions (step S6). The predetermined condition here is, for example, to have an intensity equal to or higher than a preset threshold. Other predetermined conditions may include selecting a preset number of mass peaks in descending order of intensity.
 プリカーサイオン選択部45によりプリカーサイオンが選択されると、制御部5による制御の下でMSスペクトルを取得する(ステップS3)。そして、上記同様の手順で参照化合物のマススペクトルと照合してその一致/不一致を判定し、一致する参照化合物のマススペクトルが存在しない場合(ステップS5でNO)には、さらにプリカーサイオンを選択してMSスペクトルを取得する処理を繰り返す。そして、分析中の成分について選択すべきプリカーサイオンが存在しなくなった段階で当該成分に関する質量分析を終了し、液体クロマトグラフ部から新たな成分が導入されるとその成分の質量分析を開始する。なお、2度目以降の照合時には、参照化合物に関する照合用マススペクトルが既に存在するため、これを作成するステップは省略し、試料について得たマススペクトルからのみ、新たに照合用マススペクトルを作成する。 When a precursor ion is selected by the precursor ion selection unit 45, an MS 2 spectrum is acquired under the control of the control unit 5 (step S3). Then, by comparing with the mass spectrum of the reference compound in the same procedure as described above, the coincidence / non-coincidence is determined. If the mass spectrum of the coincident reference compound does not exist (NO in step S5), a precursor ion is further selected. Repeat the process of acquiring the MS 3 spectrum. Then, when there is no precursor ion to be selected for the component under analysis, the mass analysis for the component is terminated, and when a new component is introduced from the liquid chromatograph, the mass analysis of the component is started. In the second and subsequent verifications, since a verification mass spectrum related to the reference compound already exists, the step of generating this is omitted, and a new verification mass spectrum is generated only from the mass spectrum obtained for the sample.
 本実施例の質量分析データ処理装置及び方法では、測定により取得したMSスペクトル(kは1以上n未満の整数)を参照化合物のマススペクトルと照合して一致/不一致を判定し、その結果に基づいてMSk+1スペクトルを取得するためのプリカーサイオンを選択する。そのため、化合物データベースに登録されていない、未知の化合物に関するマススペクトルを効率的に取得することができる。 In the mass spectrometry data processing apparatus and method of this example, the MS k spectrum (k is an integer of 1 or more and less than n) obtained by measurement is compared with the mass spectrum of the reference compound to determine match / mismatch, Based on this, a precursor ion for acquiring the MS k + 1 spectrum is selected. Therefore, a mass spectrum related to an unknown compound that is not registered in the compound database can be efficiently acquired.
 上記実施例は一例であって、本発明の趣旨に沿って適宜に変更することができる。上記実施例では、参照化合物に基づく除外イオンの設定、及び参照化合物のマススペクトルの照合の両方において特徴を有する構成を説明したが、これらのいずれか一方のみを用いてもよい。
 上記実施例では液体クロマトグラフ質量分析装置によりマススペクトルを取得する場合について説明したが、ガスクロマトグラフ質量分析装置や、クロマトグラフ装置を有しない質量分析装置を用いたMS分析についても同様に質量分析データ処理を行うことができる。
 また、上記実施例では、マススペクトルの照合においてAND演算を使用したが、これに限らず、例えば質量電荷比情報をリスト化したものを照合して一致/不一致を判定する等、種々の方法を用いることができる。
The above-described embodiment is an example, and can be appropriately changed in accordance with the gist of the present invention. In the above-described embodiment, the configuration having the characteristics in both the setting of the excluded ion based on the reference compound and the comparison of the mass spectrum of the reference compound has been described, but only one of these may be used.
In the above embodiment, the case where a mass spectrum is acquired by a liquid chromatograph mass spectrometer has been described. However, mass spectrometry is similarly performed for MS n analysis using a gas chromatograph mass spectrometer or a mass spectrometer having no chromatograph. Data processing can be performed.
In the above embodiment, the AND operation is used in the comparison of the mass spectrum. However, the present invention is not limited to this. For example, various methods such as determining the match / mismatch by checking the list of mass-to-charge ratio information are used. Can be used.
1…質量分析部
 10…イオン源
 11…加熱キャピラリ管
 12…イオン輸送光学系
 13…イオントラップ
 14…TOFMS
 15…検出器
4…データ処理部
 41…記憶部
 42…参照化合物情報提示部
 43…除外イオン設定部
 44…質量電荷比照合部
 45…プリカーサイオン選択部
5…制御部
6…入力部
7…表示部
DESCRIPTION OF SYMBOLS 1 ... Mass spectrometry part 10 ... Ion source 11 ... Heating capillary tube 12 ... Ion transport optical system 13 ... Ion trap 14 ... TOFMS
DESCRIPTION OF SYMBOLS 15 ... Detector 4 ... Data processing part 41 ... Memory | storage part 42 ... Reference compound information presentation part 43 ... Exclusion ion setting part 44 ... Mass to charge ratio collation part 45 ... Precursor ion selection part 5 ... Control part 6 ... Input part 7 ... Display Part

Claims (5)

  1.  MSn分析(nは2以上の整数)を実行可能な質量分析装置により、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理方法であって、
     a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報を分析者に提示し、
     b) 前記複数の参照化合物の中から1乃至複数の参照化合物を分析者に選択させ、
     c) 前記選択された1乃至複数の参照化合物に対応付けられた質量電荷比の組に対応する複数のイオンを一括して除外イオンに設定し、
     d) 前記MSスペクトル上の複数のマスピークの中から、前記除外イオンに対応するマスピークを除いて所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択する
     ことを特徴とする質量分析データ処理方法。
    A precursor based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) of a compound to be analyzed by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more). A mass spectrometry data processing method for automatically selecting ions and performing MS k + 1 analysis on the precursor ions comprising:
    a) presenting to the analyst reference compound information prepared in advance for a plurality of reference compounds, each of which is associated with a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
    b) allowing an analyst to select one or more reference compounds from the plurality of reference compounds;
    c) A plurality of ions corresponding to the set of mass to charge ratios associated with the selected one or more reference compounds are collectively set as excluded ions,
    d) Mass spectrometry data processing characterized by selecting a precursor ion by extracting a mass peak satisfying a predetermined selection condition from a plurality of mass peaks on the MS k spectrum, excluding a mass peak corresponding to the excluded ion Method.
  2.  MSn分析(nは2以上の整数)を実行可能な質量分析装置により、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理方法であって、
     a) 前記分析対象化合物のMSスペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組を、予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報と照合し、
     b) 前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のいずれかに対応付けられた質量電荷比の組を包含するか否かを判定し、
     c) 前記判定の結果、前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のそれぞれと対応付けられた複数の質量電荷比の組のいずれも包含しない場合に、前記MSスペクトル上の複数のマスピークの中から所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択する
     ことを特徴とする質量分析データ処理方法。
    A precursor based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) of a compound to be analyzed by a mass spectrometer capable of performing MS n analysis (n is an integer of 2 or more). A mass spectrometry data processing method for automatically selecting ions and performing MS k + 1 analysis on the precursor ions comprising:
    a) A set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound is created in advance for a plurality of reference compounds, and each corresponds to a plurality of mass peaks of the mass spectrum of the reference compound and the reference compound. The reference compound information matched with the mass-to-charge ratio pair to be matched,
    b) determining whether the plurality of mass-to-charge ratio pairs of the analyte compound includes a mass-to-charge ratio pair associated with any of the plurality of reference compounds;
    c) As a result of the determination, when the plurality of mass-to-charge ratio sets of the analysis target compound does not include any of the plurality of mass-to-charge ratio sets associated with each of the plurality of reference compounds, the MS A mass spectrometric data processing method comprising: extracting a precursor peak satisfying a predetermined selection condition from a plurality of mass peaks on a k spectrum and selecting a precursor ion.
  3.  前記参照化合物情報が、化合物の分子量に関する情報に基づいて理論的に作成された情報を含むことを特徴とする請求項1または2に記載の質量分析データ処理方法。 3. The mass spectrometry data processing method according to claim 1, wherein the reference compound information includes information theoretically created based on information on the molecular weight of the compound.
  4.  MSn分析(nは2以上の整数)を実行可能な構成を有し、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理装置であって、
     a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報が保存された記憶部と、
     b) 分析者に所要の情報を提示する表示部と、
     c) 前記表示部の画面上に前記参照化合物情報を提示して、分析者に1乃至複数の参照化合物を選択させる参照化合物情報提示部と、
     d) 前記選択された1乃至複数の参照化合物にそれぞれ対応付けられた複数の質量電荷比を除外イオンに設定する除外イオン設定部と、
     e) 前記MSスペクトル上の複数のマスピークの中から、前記除外イオンに対応するマスピークを除いて所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択するプリカーサイオン選択部と、
     を備えることを特徴とする質量分析データ処理装置。
    It has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and is based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) of a target compound. A mass spectrometry data processing device that automatically selects ions and performs MS k + 1 analysis on the precursor ions,
    a) a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
    b) a display to present the required information to the analyst;
    c) a reference compound information presentation unit that presents the reference compound information on a screen of the display unit and allows an analyst to select one or more reference compounds;
    d) an excluded ion setting unit that sets a plurality of mass-to-charge ratios respectively corresponding to the selected one or more reference compounds as excluded ions;
    e) a precursor ion selection unit that selects a precursor ion by extracting a mass peak that satisfies a predetermined selection condition from a plurality of mass peaks on the MS k spectrum, excluding a mass peak corresponding to the excluded ion;
    A mass spectrometry data processing device comprising:
  5.  MSn分析(nは2以上の整数)を実行可能な構成を有し、分析対象化合物のMS分析(kは1以上n未満の整数)を行って得られたMSスペクトルに基づいてプリカーサイオンを自動的に選択し、該プリカーサイオンについてMSk+1分析を実行する質量分析データ処理装置であって、
     a) 予め複数の参照化合物について作成され、参照化合物と該参照化合物のマススペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組とが対応付けられた参照化合物情報が保存された記憶部と、
     b) 前記分析対象化合物のMSスペクトルの複数のマスピークにそれぞれ対応する質量電荷比の組を、前記参照化合物情報と照合する質量電荷比照合部と、
     c) 前記照合の結果、前記分析対象化合物の複数の質量電荷比の組が、前記複数の参照化合物のいずれかに対応付けられた質量電荷比の組を包含しない場合に、前記MSスペクトル上の複数のマスピークの中から所定の選択条件を満たすマスピークを抽出してプリカーサイオンを選択するプリカーサイオン選択部と、
     を備えることを特徴とする質量分析データ処理装置。
    It has a configuration capable of performing MS n analysis (n is an integer of 2 or more), and is based on an MS k spectrum obtained by performing MS k analysis (k is an integer of 1 or more and less than n) of a target compound. A mass spectrometry data processing device that automatically selects ions and performs MS k + 1 analysis on the precursor ions,
    a) a storage unit that stores reference compound information that is created in advance for a plurality of reference compounds and that associates a reference compound and a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the mass spectrum of the reference compound;
    b) a mass-to-charge ratio matching unit that matches a set of mass-to-charge ratios respectively corresponding to a plurality of mass peaks of the MS k spectrum of the analysis target compound with the reference compound information;
    c) As a result of the collation, when the plurality of mass-to-charge ratio pairs of the analysis target compound do not include the mass-to-charge ratio pair associated with any of the plurality of reference compounds, the MS k spectrum A precursor ion selector that selects a precursor ion by extracting a mass peak satisfying a predetermined selection condition from the plurality of mass peaks;
    A mass spectrometry data processing device comprising:
PCT/JP2014/050367 2014-01-10 2014-01-10 Mass-spectrometry-data processing method and mass-spectrometry-data processing device WO2015104844A1 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
PCT/JP2014/050367 WO2015104844A1 (en) 2014-01-10 2014-01-10 Mass-spectrometry-data processing method and mass-spectrometry-data processing device

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/JP2014/050367 WO2015104844A1 (en) 2014-01-10 2014-01-10 Mass-spectrometry-data processing method and mass-spectrometry-data processing device

Publications (1)

Publication Number Publication Date
WO2015104844A1 true WO2015104844A1 (en) 2015-07-16

Family

ID=53523691

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/JP2014/050367 WO2015104844A1 (en) 2014-01-10 2014-01-10 Mass-spectrometry-data processing method and mass-spectrometry-data processing device

Country Status (1)

Country Link
WO (1) WO2015104844A1 (en)

Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2004071420A (en) * 2002-08-08 2004-03-04 Hitachi Ltd Mass spectrometric system, method of mass spectrometry, and mass spectrometer
JP2012002544A (en) * 2010-06-14 2012-01-05 Shimadzu Corp Chromatograph mass spectrometer
JP2012098276A (en) * 2010-11-03 2012-05-24 Agilent Technologies Inc System and method for curating mass spectral libraries
JP2012225862A (en) * 2011-04-22 2012-11-15 Shimadzu Corp Mass analysis data processor
JP2013224858A (en) * 2012-04-20 2013-10-31 Shimadzu Corp Chromatograph tandem quadrupole type mass spectroscope

Patent Citations (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2004071420A (en) * 2002-08-08 2004-03-04 Hitachi Ltd Mass spectrometric system, method of mass spectrometry, and mass spectrometer
JP2012002544A (en) * 2010-06-14 2012-01-05 Shimadzu Corp Chromatograph mass spectrometer
JP2012098276A (en) * 2010-11-03 2012-05-24 Agilent Technologies Inc System and method for curating mass spectral libraries
JP2012225862A (en) * 2011-04-22 2012-11-15 Shimadzu Corp Mass analysis data processor
JP2013224858A (en) * 2012-04-20 2013-10-31 Shimadzu Corp Chromatograph tandem quadrupole type mass spectroscope

Similar Documents

Publication Publication Date Title
JP5590156B2 (en) Mass spectrometry method and apparatus
US11378560B2 (en) Mass spectrum data acquisition and analysis method
US11817185B2 (en) Stable label isotope tracing for untargeted data
KR20080070013A (en) Mass spectroscope
WO2018042605A1 (en) Mass spectrometry data processing device
JP4758862B2 (en) Mass spectrometry method and apparatus
WO2008035419A1 (en) Mass spectrometry method
US8026479B2 (en) Systems and methods for analyzing substances using a mass spectrometer
JP5510011B2 (en) Mass spectrometry method and mass spectrometer
EP2924712B1 (en) Method and apparatus for increased ion throughput in tandem mass spectrometers
CN111758146A (en) DM-SWATH acquisition for improving MSMS confidence
JP5979306B2 (en) Mass spectrometer
WO2019012589A1 (en) Mass spectrometry device, mass spectrometry method, and mass spectrometry program
JP6698668B2 (en) High-speed scanning of wide quadrupole RF window while switching fragmentation energy
JP6222277B2 (en) Tandem mass spectrometry data processor
JPWO2018163926A1 (en) Tandem mass spectrometer and program for the same
US11094399B2 (en) Method, system and program for analyzing mass spectrometoric data
WO2015104844A1 (en) Mass-spectrometry-data processing method and mass-spectrometry-data processing device
CN115440568A (en) Mass spectrometer for compound identification using mass spectral database search
EP3204740B1 (en) Improving information dependent analysis (ida) spectral output for database searches
JP7070692B2 (en) Mass spectrometer and mass spectrometry method
WO2016142863A1 (en) Method of increasing quality of tandem mass spectra
US10429364B2 (en) Detecting low level LCMS components by chromatographic reconstruction
US20140353490A1 (en) Mass spectrometry systems and methods for improved multiple reaction monitoring
JP6477332B2 (en) Mass spectrometry method, mass spectrometer, and program for mass spectrometry

Legal Events

Date Code Title Description
121 Ep: the epo has been informed by wipo that ep was designated in this application

Ref document number: 14877773

Country of ref document: EP

Kind code of ref document: A1

NENP Non-entry into the national phase

Ref country code: DE

NENP Non-entry into the national phase

Ref country code: JP

122 Ep: pct application non-entry in european phase

Ref document number: 14877773

Country of ref document: EP

Kind code of ref document: A1