WO2015027595A1 - Magnetospirillum magneticum, preparation method therefor, and use thereof - Google Patents

Magnetospirillum magneticum, preparation method therefor, and use thereof Download PDF

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WO2015027595A1
WO2015027595A1 PCT/CN2013/088421 CN2013088421W WO2015027595A1 WO 2015027595 A1 WO2015027595 A1 WO 2015027595A1 CN 2013088421 W CN2013088421 W CN 2013088421W WO 2015027595 A1 WO2015027595 A1 WO 2015027595A1
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vitamin
mixture
magnetospirillum
magnetosome
mineral mixture
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Chinese (zh)
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刘朋明
高梅影
陈亚军
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中国科学院武汉病毒研究所
武汉羽晖特纳生物科技有限公司
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Publication of WO2015027595A1 publication Critical patent/WO2015027595A1/en

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    • C12N1/00Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20Bacteria; Culture media therefor
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    • C12N1/00Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
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    • C12PFERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P3/00Preparation of elements or inorganic compounds except carbon dioxide
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    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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    • C12R2001/00Microorganisms ; Processes using microorganisms
    • C12R2001/01Bacteria or Actinomycetales ; using bacteria or Actinomycetales

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  • the present invention relates to the field of nano biotechnology, and in particular to a magnetospirilling strain ME-1 capable of producing a superparamagnetic nano magnetosome, and also relates to a The apparatus for collecting the magnetobacteria, the fermenting method of the magnetospirillum, and the application of the magnetospirillum to the preparation of the superparamagnetic magnetosome.
  • Magnetotactic bacteria are a kind of special bacteria capable of forming nano-magnetic bodies in cells, and the magnetosomes formed thereof have external magnetic field controllability, crystal form stability, nanometer size, excellent biosafety, and outer biofilm.
  • the magnetosomes produced by the current internationally isolated and purified magnetotactic bacteria are single-domain size magnetosomes, which have remanence and coercivity when used as a targeted drug carrier, and are easy to agglomerate and thus easily lead to Form a thrombus.
  • the US special strain lj: US4385119 isolated strain Afoge «tosp r ⁇ Mff2 magnetotacticum MS-1 produced a magnetoid body size of 50 nm and the culture conditions are not strong enough to achieve fermentative production of magnetosomes.
  • the magnetosome provided by Magentospiri m gryphiswaldense MSR-1 is about 43 to 45 nanometers in the US patent US20020012698A1, and the magnetosome provided by Magentospirillum magneticum AMB-1 in Japanese patent JP7241192A is about 50 nanometers.
  • the magnetosomes produced by the three strains of the most deeply studied magnetotactic bacteria in the world are single magnetic domain particles.
  • the production of magnetosomes with smaller particle diameter, less thrombus formation and better dispersion performance will have greater application value than traditional magnetosomes.
  • the production of superparamagnetic magnetosomes by magnetotactic bacteria has not been reported so far. .
  • An object of the present invention is to provide a magnetospirillum which can produce superparamagnetic magnetosomes and is easy to be cultured on a large scale.
  • ME-1 this strain produces superparamagnetic magnetosomes with a size of 26 ⁇ 5nm, which is about 1/2 of the size of the magnetosome produced by all the pure culture strains of magnetotactic bacteria reported in the past. It has great potential in the medical field. Application and development potential.
  • the bacteria was sent to the China Center for Type Culture Collection on June 14, 2013. The classification was named: MagnetospirU m sp. ME-1; accession number: CCTCC NO: M2013260; Address: Wuhan University, Wuhan, China.
  • Another object of the present invention is to provide a fermentation method of magnetospirillum ME-1, which is simple and easy to carry out, and has excellent fermentation performance, and solves a large bottleneck of industrial production of magnetic bodies.
  • Still another object of the present invention is to provide a magnetotactic bacteria collection device which is simple and efficient in design and easy to manufacture by hand. For the collection of magnetotactic bacteria, it can directly enrich and collect magnetotactic bacteria in natural water bodies, eliminating the steps of collecting muddy water samples back to the laboratory for enrichment, avoiding the diversity of magnetotactic bacteria during laboratory enrichment. The loss of sex, in turn, can collect more naturally occurring magnetotactic bacteria in natural waters, effectively improving the success rate of separation of pure cultures by magnetotactic bacteria.
  • a final object of the present invention is to provide an application of a magnetobacteria in the preparation of a superparamagnetic magnetosome having a good dispersibility of the outer biofilm and a large amount of the envelope.
  • the bioactive group is used for covalently linking with other molecules, and the drug-loaded magnetosome can release the drug by degrading the magnetic extracorporeal membrane in vivo, has good biocompatibility and safety, and has a narrow particle size distribution.
  • a series of advantages such as stable crystal form, single crystal component and no impurities. Compared with the previously reported single magnetic domain magnetosome particles produced by the pure culture strain of magnetotactic bacteria, the size is only about 1/2 of the size of the single magnetic domain magnetosome particles and has superparamagnetism.
  • a magnetospirillum ME-1 obtained according to the following preparation steps:
  • ME-1 of the present invention has been preserved in the China Center for Type Culture Collection, Address: Wuhan University, Wuhan, China, Date of Deposit: June 14, 2013, Accession No.: CCTCC NO: M 2013260, the classification is named: Magnetospirillum M/g «etos ⁇ r ⁇ M»j sp. ME-1.
  • the method is characterized in that the magnetobacteria are microaerobic bacteria, the shape of the cells is spiral, and the flagella are both ends, and the size of the cells is 2.62 ⁇ 4.83 ⁇ 0.44 ⁇ 0.62 ⁇ , and each cell produces a 10 ⁇ 31 A magnetosome chain composed of a cubic octahedron or a cubic magnet body having a size of 26 ⁇ 5 nm.
  • the main composition of magnetosome crystals is iron and oxygen, and the particles are in the range of superparamagnetic domain size.
  • the physiological and biochemical characteristics of the strain are shown in Table 5.
  • Spirulina The gene island responsible for the synthesis of magnetosomes in the sp. ME-1 genome was analyzed. Single colony inoculation of growth medium, purification of genomic DNA (method refer to Journal of Molecular Biology, 1961, 3: 208-218), genome sequencing to obtain 16SrDNA sequence (this sequence is shown in SEQ No. 2 of the Sequence Listing), for phylogeny Tree analysis found that it belongs to the genus Streptomyces. The magnetosome gene island sequence was obtained (this sequence is shown in SEQ No. 3 and SEQ No.
  • a device for collecting magnetotactic bacteria constructed as follows: a cylindrical plastic collection box (1) with one end open; filter paper (2); a metal tripod (3); a permanent strong magnet (4); and a fishing line (5).
  • the connection relationship is: filter paper (2) through the metal tripod (3) to the sealed end of the cylindrical plastic collection box (1) open end, the S pole of the permanent strong magnet (4) and the closed end of the cylindrical plastic box (1) Connected, the fishing line (5) is connected to the N pole of the permanent magnet (4).
  • the filter paper is a fast qualitative filter paper, the filter paper has a pore size of 80 ⁇ 120 micrometers; the permanent strong magnet is a button type; the magnetotactic bacteria collection device uses the following steps:
  • a fermenting method for the bacterium Mycobacterium ME-1, the breeding conditions are:
  • the 10 L fermentor was filled with 6 L of growth medium, inoculated with 10% inoculum, culture conditions were 30 ° C, air was passed at 20 L/h, stirring speed was coupled with 2% dissolved oxygen, and the feed was coupled with pH 6.86.
  • Magnetospirillum ME-1 grew to a cell density of OD 565 2.5 in about 40 hours under such culture conditions, and a magnetic body yield of 55 mg/L was obtained.
  • the growth medium formula is: vitamin mixture lml / l, mineral mixture 2 ml / 1, potassium phosphate buffer (0.1M, pH7.0) 10ml / l, sodium succinate 0.05% (m / V) , sodium acetate 0.05% (m/V), yeast extract 0.025% (m/V), ammonium chloride 0.05% (m/V), magnesium sulfate 0.01% (m/V), ferric citrate, vitamins The mixed solution and the mineral mixture solution are separately sterilized by the medium, and the filter sterilization liquid is separately added.
  • the formula of the feed liquid is: a vitamin mixture of 10 ml / l, a mineral mixture of 20 ml / 1, a potassium phosphate buffer (0.1 M, pH 7.0) lOOml / 1, sodium succinate 0. 5% (m / V), sodium acetate 0. 5% (m/V), yeast extract 0.25% (m/V), ammonium chloride 0. 5% (m/V), ferric citrate lmM, wherein the vitamin mixture
  • the mineral mixture solution is sterilized by the medium and the filter solution is separately added.
  • the formulation and configuration method of the vitamin mixture are shown in Table 2.
  • the mineral mixture formulation and configuration method are shown in Table 3.
  • the preferred medium and feeding formula are as follows:
  • the growth medium formula is: vitamin mixture 3 ml/l, mineral mixture 2 ml/l, adipic acid 0.2% m/V, ammonium nitrate 0.05% m/V, yeast extraction 0.05% m/V, peptone 0.25% m/V, 150 ⁇ M ferric citrate, wherein the vitamin mixture and mineral mixture need to be separately sterilized by filtration to remove the bacterial solution;
  • the formula of the feed solution is: vitamin mixture 30ml/l, mineral mixture 20 ml/1, adipic acid 2.0% m/V, ammonium nitrate 0.5% m/V, yeast extract 0.5% m/V, peptone 2.5% m/V, ferric citrate 0.05 % m/V, wherein the vitamin mixture and the mineral mixture are separately added to the filter sterilization solution after the medium is sterilized.
  • the formulation and configuration method of the vitamin mixture are shown in Table 2.
  • the mineral mixture formulation and configuration method are shown in Table 3.
  • the magnetosome produced by the magnetospirillum ME-1 provided by the present invention has a magnetosome size of 26 ⁇ 5 nm.
  • Magnetic domain analysis (method reference Geochemistry Geophysics Geosystems, 2009, 10: 1-19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12 and Journ d Of Geophysical Research, 1975, 80: 4049-4058) In the magnetospirillic cells, since the magnetosomes are close to each other in the chain and exhibit a single magnetic domain characteristic, the magnetosomes are separated from each other to exhibit superparamagnetic characteristics.
  • the present invention provides a magnetic parasitic bacterium capable of producing a superparamagnetic magnetic body, and the superparamagnetic magnetic body produced has a size of 26 ⁇ 5 nm.
  • the biofilm has good dispersibility, and the envelope can provide a large number of bioactive groups for covalent attachment with other molecules, and the drug-loaded magnetosomes can degrade magnetically in vivo.
  • the small extracorporeal membrane can achieve a series of advantages such as drug release, good biocompatibility and safety, narrow particle size distribution, stable crystal form, and single crystal component without impurities.
  • the magnetic spirulina can use the common fermenter to produce magnetic bodies by air fermentation, and has excellent fermentation performance, and has great advantages and industrialization promotion prospects in the industrial production of magnetic bodies.
  • the invention provides a magnetotactic bacteria collecting device which is simple and efficient in design and easy to manufacture by hand.
  • FIG. 1 is a schematic view of a magnetotactic bacteria collection device. Among them: 1 is a cylindrical plastic collection box with one end open, 2 is filter paper, 3 is a metal tripod, 4 is a button-shaped permanent strong magnet, and 5 is a fishing line. In Fig.
  • A is a spiral microscopic morphology of Magnetospiri Uum sp. ME-1 and its magnetosome electron microscopic morphology.
  • B is the energy spectrum of the composition of the magnetosome, and it can be seen that the energy spectrum of the magnetosome is larger than the energy spectrum of the blank region of the cell, and the probe has a diameter of 2-10 nm.
  • A is a statistical analysis of the width of the magnetosome, and its width is 23 ⁇ 5 nm ; in Fig. 3, B is a statistical analysis of the length of the magnetosome, and its length is 26 ⁇ 5 nm; the statistical quantity is 420.
  • A is a morphological view of a purified magnetosome.
  • the purified magnetosomes have a uniform size and an average size of 26 ⁇ 5 nm.
  • A1 is an enlarged magnetosome, and its shape is a cubic octahedron, and the arrow shows a biofilm.
  • B is a schematic diagram of magnetic domain distribution analysis of magnetic bodies. The analysis of the magnetic domain characteristics of the magnetosome shows that the magnetosome exhibits a single magnetic domain characteristic in the case of interaction between the magnetosomes, and the superparamagnetic property appears in the absence of interaction after separation of the magnetosomes. Specifically, the following is a detailed description of the obtaining, characterization, and fermentation culture and preparation method of the magnetic body of the present invention.
  • Example 1 A magnetospirillum ME-1 was screened by the following procedure: 1) Collection and capillary separation of magnetotactic bacteria samples:
  • Magnetotactic bacteria collection Inverted collection device, cylindrical plastic collection box 1 filled with filtered in-situ water (in situ The water is collected from the water sample at the interface of the mud and water, filtered and sterilized by 0.22 ⁇ filter membrane.
  • the filter paper 2 is sealed with a metal tripod 3, and the magnet 4 and the fishing line 5 are placed in the natural water environment to make the device stand in the muddy water.
  • the filter paper surface of the collection device is located at 1 ⁇ 2cm above the mud-water interface. After 12 hours of storage, remove it, remove the tripod, carefully open the filter paper, and take the collected liquid from the collection box and observe it under optical microscope within 2 hours. The fabrication of an electron microscope copper mesh and the separation and culture of magnetotactic bacteria.
  • the magnetotactic bacteria collecting device is: a cylindrical plastic collecting box 1 with one end open; a filter paper 2; a metal tripod 3; a permanent strong magnet 4; and a fishing line 5.
  • the connection relationship is as follows:
  • the filter paper 2 is connected to the open end of the cylindrical plastic collecting box 1 through the metal tripod 3, and the S pole of the permanent strong magnet 4 is connected with the closed end of the cylindrical plastic box 1, the fishing line 5 and the permanent strong magnet 4
  • the N pole connection is shown in Figure 1.
  • the filter paper is a fast qualitative filter paper, the filter paper has a pore size of 80 ⁇ 120 microns; the permanent strong magnet is a button type;
  • MilliQ water 10 00.000 ml was dissolved in sequence, filtered at 0.22 ⁇ m and stored at 4 ° C until use.
  • the formulation of the mineral mixture is shown in Table 3.
  • Nitrilotriacetic acid 1.500 g Magnesium sulfate heptahydrate (MgS0 4 '7H 2 0) 3.000 g Manganese sulfate dihydrate (MnSCV2H 2 0) 0.500 g Sodium chloride (NaCl) 1.000 g Seven Ferrous sulfate (FeS0 4 '7H 2 0) 0.100 g Cobalt sulfate heptahydrate (CoSCV7H 2 0) 0.180 g Calcium chloride dihydrate (CaCl 2 '2H 2 0) 0.100 g Zinc sulfate heptahydrate (ZnSCV7H 2 0) 0.180 g Copper sulfate pentahydrate (CuS0 4 '5H 2 0) 0.010 g Potassium aluminum sulfate dodecahydrate (KA1(S0 4 ) 2 -12
  • MilliQ water 10 00.000 ml First dissolve nitrous triacetate with KOH adjusted to pH 6.5, then add each mineral, and finally KOH ⁇ 7.0, 0.22 ⁇ filter and store at 4 °C.
  • Magnetospirillum sp. ME-1 strain Single colony obtained The magnetomic bacteria primary culture was inoculated with the magnetotactic bacterial growth medium in the anaerobic tube. The culture was carried out at 30 ° C for more than 7 days until a magnetotactic bacterial disc-shaped growth band was obtained in the semi-solid medium. The culture was taken out and observed by phase contrast microscopy to confirm the presence of magnetotactic bacteria. For growth, the culture was separated as a seed solution of pure culture by limiting gradient dilution three times (method reference to The lSME Journal, 2012, 6: 440-450).
  • MagnetospirU m sp. ME- 1 Deposit No.: CCTCC NO: M 2013260, Address: Wuhan University, Wuhan, China.
  • the structure of the magnetotactic bacteria growth medium is shown in Table 4.
  • Table 4 Magnetotactic bacteria growth medium formula ingredients will be a bone unit vitamin mixture 1 ml mineral mixture 2 ml potassium phosphate buffer (pH 7.0) 1 mM Sodium succinate 0.1 g sodium acetate 0.1 g yeast extract 0.05 g
  • the size of the bacteria is 2.62 ⁇ 4.83 ⁇ 0.44 ⁇ 0.62 ⁇ .
  • the magnetic body size is 26nm.
  • Genomic extraction Genomic DNA of strain ME-1 was extracted by glass rod stirring method (Method reference of Molecular Biology, 1961, 3: 208-218) involve Roche GS FLX shotgun database, Roche GS FLX Titanium System 454 sequencer sequencing, The sequence is spliced to produce 79 CO ntigs.
  • mamGFDC cistron contains four magnetosome-related genes such as mamG, mamF, mamD and mamC; mms6 cistron contains magnetosome-related gene mms6; mamAB cistron contains mamH, maml, mamE, mamJ, mamK, mamL 18 magnetosome-related genes such as mamM, mamN, mamO, mamP, mamA, mamQ, mamR, mamB, mamS, mamT, mamU, mamV; mamGFDC mms6, mamAB sequence as shown in SEQ ID No.
  • mamXY (This sequence is shown in SEQ ID No. 1 of the Sequence Listing) contains 6 magnetosome-related genes such as mms5, mamY, mamX-like, mamZ, mamH-like, and FtsZ-like, and is related to other magnetosome-related genes in the genome. The distance between them is far.
  • Example 3
  • the growth of Magnetospirillum sp. ME-1 strains was carried out in a 10 L fermentor with the fermentation of the Magnetospiri Uwn sp. ME-1: The specific conditions were: 10 L of fermenter was added with growth medium 6 L, inoculated with 10% inoculum, cultured The condition was 30 ° C, air was passed at 20 L/h, the stirring speed was coupled with 2% dissolved oxygen, and the feed was coupled with a pH of 6.86. Magnetospirillum Magnetospirillmn sp. ME-1 grew to OD 565 2.5 in this culture condition for about 40 hours.
  • the growth medium formula is: Vitamin mixture (see Table 2 for formula) lml/1, mineral mixture (see Table 3 for formula) 2 ml/1, potassium phosphate buffer (0.1M, pH7.0) 10ml /l , Sodium succinate 0.05% (m/V), Sodium acetate 0.05% (m/V), Yeast extract 0.025% (m/V), Ammonium chloride 0.05% (m/V), Magnesium sulfate 0.01% (m/V), 100 ⁇ M of ferric citrate, in which the vitamin mixture and the mineral mixture are sterilized by the medium, and the filter solution is separately added.
  • the feed liquid formula is: vitamin mixture (see Table 2 for formula) 10ml/l, mineral mixture (see Table 3 for formula) 20 ml/1, potassium phosphate buffer (0.1M, pH 7.0) lOOml/1, sodium succinate 0. 5% (m/V), sodium acetate 0. 5% (m/V), yeast extract 0.25 % (m/V), ammonium chloride 0. 5% (m/V), iron citrate lmM, wherein the vitamin mixture and the mineral mixture need to be sterilized by the medium, and the filter solution is separately added.
  • Example 4 :
  • the magnetotactic bacteria are: magnetobacteria Afog «etos ⁇ r ⁇ M»js;?. ME-1, CCTCC NO: M2013260; the growth medium formula is: vitamin mixture 3ml / l (formulation See Table 2), mineral mixture 2 ml/1 (formulation shown in Table 3), adipic acid 0.2% m/V, ammonium nitrate 0.05% m/V, yeast extract 0.05% m/V, peptone 0.25% m /V, 150 ⁇ of ferric citrate, wherein the vitamin mixture and the mineral mixture need to be separately sterilized by adding the filter sterilization solution; the formula of the feed solution is: vitamin mixture 30ml/l (see Table 2 for formula) ), mineral mixture 20 ml/1 (formulation shown in Table 3), adipic acid 2.0% m/V, ammonium nitrate 0.5% m/V, yeast extract 0.5% m/V, peptone 2.5% m/V, Ferric citrate 0.05%
  • the collected magnetosomes are weighed with a filter paper and weighed; Magnetospirillum sp. ME-1 is fermented for about 40 hours to obtain a yield of 55 mg/L.
  • the fermentation broth obtained in the medium and the culture conditions of Example 4 had a magnetic body yield of 177 mg/L.
  • the magnetosomes obtained by transmission electron microscopy were cubic octahedrons or cubes, and the outer biofilm (Fig. 4) was uniform in particle size. The measurement showed that the width was 23 ⁇ 5 nm and its length was 26 ⁇ 5 nm (Fig. 3 ).
  • Magnetic domain analysis (method reference Geochemistry Geophysics Geosystems, 2009, 10: 1-19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12 and Journ d Of Geophysical Research, 1975, 80: 4049-4058) Its magnetic domain distribution is in the range of superparamagnetic properties (Fig. 4).

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Abstract

Disclosed are a magnetospirillum magneticum, a preparation method therefor, and a use thereof. In the preset invention, a magnetospirillum magneticum Magnetospirillum sp. ME-1, CCTCC No: M2013260 which can produce superparamagnetic magnetosomes is separated fresh water. The strain is a magnetospirillum magneticum with a size of 2.62~4.83×0.44~0.62μm, and comprises a magnetosome chain consisting of 10 to 31 magnetosome particles. A component of each magnetosome is ferroferric oxide, is a cuboctahedron or an octahedron in shape, and has a size of 26±5nm which is in a superparamagnetic range. The magnetospirillum magneticum strain has a specific magnetosome gene island sequence and can produce magnetosomes with a yield of 177mg/L by directly using air fermental cultivation. The strain has excellent fermentability, and produces magnetosome particles which are superparamagnetic, and has a great industrialization popularization prospect.

Description

一种趋磁螺菌及其制备方法和应用 技术领域 本发明涉及纳米生物技术领域, 具体地涉及一种能产生超顺磁性纳米磁小体的趋磁螺 菌菌株 ME-1 , 同时还涉及一种采集该趋磁螺菌的装置, 还涉及该趋磁螺菌的发酵方法, 还 涉及该趋磁螺菌在制备超顺磁性磁小体中的应用。 背景技术 趋磁细菌是一类能在胞内形成纳米磁小体的特殊细菌, 其形成的磁小体具有外磁场可 操控性、 晶型稳定、 纳米尺寸、 生物安全性优良、 外被生物膜而不易团聚等特点, 在免疫检 测、 药物输送、 多功能分子载体、 肿瘤磁热疗、 核磁共振成像等方面显示出相较于其他材料 的巨大优势, 特别是在靶向药物治疗上具有重要的应用前景。 但是, 一方面是现有趋磁细菌菌株发酵培养困难, 难以通过大量培养趋磁细菌获得足 够的磁小体进行商业化应用, 因此磁小体的应用目前仍然只是停留在概念验证阶段。找到生 产性状优良的趋磁细菌菌种一直是该领域面临的难题。 中国专利 ZL02115867.3、 ZL02115868.1和 CN1952112A分别提出的"一种淤泥趋磁细菌及其分离纯化和制备磁小体的 方法"、 "一种铁矿趋磁细菌及其分离纯化和制备磁小体的方法 "和"一种兼性厌氧趋磁细菌及 其分离、 纯培养方法和磁小体的提纯、 纯化方法", 虽然能够得到磁小体, 但仍未见深入研 究及规模化生产和应用的报道。另一方面, 目前国际上分离纯化的趋磁细菌所产生的磁小体 均为单磁畴尺寸磁小体,在作为靶向药物载体时由于具有剩磁和矫顽力,易于团聚进而容易 导致形成血栓。 美国专禾 lj : US4385119分离的菌株 Afoge«tosp r〃Mff2 magnetotacticum MS-1 所产磁小体大小为 50 纳米且培养条件苛刻无法实现发酵生产磁小体。 美国专利 US20020012698A1中用 Magentospiri m gryphiswaldense MSR-1所提供磁小体大小为 43〜45 纳米左右, 日本专利 JP7241192A中用 Magentospirillum magneticum AMB-1所提供的磁小体 大小为 50纳米左右。 这三株目前世界上研究最深入的趋磁细菌菌株所生产的磁小体均为单 磁畴颗粒。 生产颗粒直径更小、 更不易形成血栓、 分散性能更优良的磁小体, 将比传统的磁 小体具有更大的应用价值, 然而利用趋磁细菌生产超顺磁性磁小体至今未见报道。 发明内容 本发明的目的在于提供了一种能生产超顺磁性磁小体且易于规模化培养的趋磁螺菌 ME-1 , 该菌株产生大小为 26±5nm的超顺磁性磁小体, 是以往报道的所有趋磁细菌纯培养 菌株产生的磁小体大小的 1/2 左右, 在医学领域具有极大的应用和开发潜力。 该细菌已于 2013年 6月 14日送往中国典型培养物保藏中心保藏,分类命名:趋磁螺菌 MagnetospirU m sp. ME-1 ; 保藏编号: CCTCC NO: M2013260 ; 地址: 中国 武汉 武汉大学。 本发明的另一个目的在于提供了一种趋磁螺菌 ME-1的发酵方法, 方法简单, 易行, 该 菌株发酵性能优良, 解决了磁小体产业化生产的一大瓶颈, 具有极大的产业化推广前景。 本发明还有一个目的是在于提供了一种趋磁细菌采集装置, 该装置设计简洁高效, 易 于手工制作。用于趋磁细菌的采集, 可以直接在自然水体中富集并采集趋磁细菌, 省去了以 往采集泥水样品带回实验室富集的步骤, 避免了实验室富集过程中趋磁细菌多样性的损失, 进而可以采集到自然水体中更多样天然存在的趋磁细菌,有效的提高趋磁细菌分离纯培养的 成功率。 TECHNICAL FIELD The present invention relates to the field of nano biotechnology, and in particular to a magnetospirilling strain ME-1 capable of producing a superparamagnetic nano magnetosome, and also relates to a The apparatus for collecting the magnetobacteria, the fermenting method of the magnetospirillum, and the application of the magnetospirillum to the preparation of the superparamagnetic magnetosome. BACKGROUND OF THE INVENTION Magnetotactic bacteria are a kind of special bacteria capable of forming nano-magnetic bodies in cells, and the magnetosomes formed thereof have external magnetic field controllability, crystal form stability, nanometer size, excellent biosafety, and outer biofilm. It is not easy to agglomerate, and it shows great advantages compared with other materials in immunoassay, drug delivery, multifunctional molecular carrier, tumor magnetic hyperthermia, magnetic resonance imaging, etc., especially in targeted drug therapy. Application prospects. However, on the one hand, the existing magnetotactic bacteria strains are difficult to ferment and culture, and it is difficult to obtain sufficient magnetosomes for commercial application by mass culture of magnetotactic bacteria. Therefore, the application of magnetosomes is still only in the proof of concept stage. It has been a difficult problem in the field to find a magnetotactic bacterial strain with excellent production traits. Chinese patents ZL02115867.3, ZL02115868.1 and CN1952112A respectively propose "a sludge magnetotactic bacteria and a method for separating and purifying and preparing magnetosomes", "an iron ore magnetotactic bacteria and their separation and purification and preparation of magnetic small The method of "body" and "a facultative anaerobic magnetotactic bacteria and their separation, pure culture method and purification and purification method of magnetic bodies", although the magnetosomes can be obtained, no in-depth research and large-scale production have been found. And application reports. On the other hand, the magnetosomes produced by the current internationally isolated and purified magnetotactic bacteria are single-domain size magnetosomes, which have remanence and coercivity when used as a targeted drug carrier, and are easy to agglomerate and thus easily lead to Form a thrombus. The US special strain lj: US4385119 isolated strain Afoge«tosp r〃Mff2 magnetotacticum MS-1 produced a magnetoid body size of 50 nm and the culture conditions are not strong enough to achieve fermentative production of magnetosomes. The magnetosome provided by Magentospiri m gryphiswaldense MSR-1 is about 43 to 45 nanometers in the US patent US20020012698A1, and the magnetosome provided by Magentospirillum magneticum AMB-1 in Japanese patent JP7241192A is about 50 nanometers. The magnetosomes produced by the three strains of the most deeply studied magnetotactic bacteria in the world are single magnetic domain particles. The production of magnetosomes with smaller particle diameter, less thrombus formation and better dispersion performance will have greater application value than traditional magnetosomes. However, the production of superparamagnetic magnetosomes by magnetotactic bacteria has not been reported so far. . SUMMARY OF THE INVENTION An object of the present invention is to provide a magnetospirillum which can produce superparamagnetic magnetosomes and is easy to be cultured on a large scale. ME-1, this strain produces superparamagnetic magnetosomes with a size of 26±5nm, which is about 1/2 of the size of the magnetosome produced by all the pure culture strains of magnetotactic bacteria reported in the past. It has great potential in the medical field. Application and development potential. The bacteria was sent to the China Center for Type Culture Collection on June 14, 2013. The classification was named: MagnetospirU m sp. ME-1; accession number: CCTCC NO: M2013260; Address: Wuhan University, Wuhan, China. Another object of the present invention is to provide a fermentation method of magnetospirillum ME-1, which is simple and easy to carry out, and has excellent fermentation performance, and solves a large bottleneck of industrial production of magnetic bodies. The prospect of industrialization promotion. Still another object of the present invention is to provide a magnetotactic bacteria collection device which is simple and efficient in design and easy to manufacture by hand. For the collection of magnetotactic bacteria, it can directly enrich and collect magnetotactic bacteria in natural water bodies, eliminating the steps of collecting muddy water samples back to the laboratory for enrichment, avoiding the diversity of magnetotactic bacteria during laboratory enrichment. The loss of sex, in turn, can collect more naturally occurring magnetotactic bacteria in natural waters, effectively improving the success rate of separation of pure cultures by magnetotactic bacteria.
本发明最后一个目的是在于提供了一种趋磁螺菌在制备超顺磁性磁小体中的应用,该超 顺磁性磁小体颗粒具有外被生物膜分散性良好、包膜可提供大量的生物活性基团用于与其他 分子共价连接、载药磁小体在体内通过降解磁小体外膜的方式可实现药物的释放、具有良好 的生物相容性和安全性、粒径分布范围窄、晶形稳定、晶体成分单一无杂质等一系列的优点。 相较于以往报道的趋磁细菌纯培养菌株所产生的单磁畴磁小体颗粒,由于大小只有以往报道 单磁畴磁小体颗粒大小的 1/2左右且具有超顺磁性, 因而在应用中不易团聚、 分散性更好、 更不易形成血栓。 为了实现上述的目的, 本发明采用以下技术措施: 一种趋磁螺菌 ME-1, 按照以下制备步骤得到:  A final object of the present invention is to provide an application of a magnetobacteria in the preparation of a superparamagnetic magnetosome having a good dispersibility of the outer biofilm and a large amount of the envelope. The bioactive group is used for covalently linking with other molecules, and the drug-loaded magnetosome can release the drug by degrading the magnetic extracorporeal membrane in vivo, has good biocompatibility and safety, and has a narrow particle size distribution. A series of advantages such as stable crystal form, single crystal component and no impurities. Compared with the previously reported single magnetic domain magnetosome particles produced by the pure culture strain of magnetotactic bacteria, the size is only about 1/2 of the size of the single magnetic domain magnetosome particles and has superparamagnetism. It is not easy to agglomerate, has better dispersibility, and is less prone to thrombosis. In order to achieve the above object, the present invention adopts the following technical measures: A magnetospirillum ME-1, obtained according to the following preparation steps:
1. 采用自制的趋磁细菌采集装置 (图 1 ), 从自然界水域中直接富集并收集趋磁细菌样品。 1. Using a self-made magnetotactic bacteria collection device (Fig. 1), directly enrich and collect magnetotactic bacteria samples from natural waters.
2. 利用毛细管 Race-track (RT ) 法 参考 FEMS Microbiology Letters, 1987, 45: 31-35 ) 对获得的样品进一步纯化。 2. Further purification of the obtained sample using the capillary Race-track (RT) method with reference to FEMS Microbiology Letters, 1987, 45: 31-35).
3. 纯化获得的趋磁细菌接种氧-硫梯度培养基(方法参考 Systematic and Applied Microbiology, 1999, 22:466-471 , 培养基配方见表 1 ), 30°C培养 7天以上。 3. Purification of the obtained magnetotactic bacteria inoculated with oxygen-sulfur gradient medium (method refer to Systematic and Applied Microbiology, 1999, 22: 466-471, and the medium formulation is shown in Table 1), and cultured at 30 ° C for more than 7 days.
4. 半固体培养基中出现趋磁细菌盘状生长条带, 取出趋磁细菌培养物采用极限密度梯度稀 释法 (Dilution to Extinction Methods ) 接种趋磁细菌生长培养基 (见表 4)。 5. 获得的纯种培养物经过三次极限密度梯度稀释法分离进而纯化获得趋磁细菌纯培养菌株。 用光学相差显微镜悬滴法观察菌株磁性, 选取生长最快、 磁性最好的纯培养菌株 Magnetospirillum sp. ME-1。 本发明的趋磁螺菌菌株 MagnetospiriUum sp. ME-1已经在中国 典型培养物保藏中心保藏, 地址: 中国.武汉.武汉大学, 保藏日期: 2013年 6月 14日, 保 藏编号: CCTCC NO:M 2013260, 分类命名为: 趋磁螺菌 M/g«etos^r〃M»j sp. ME-1。 其特征在于该趋磁螺菌为微好氧细菌, 菌体形态为螺旋状, 两端生鞭毛, 菌体大小为 2.62~4.83Χ0.44~0.62μπι,每个菌体产生一条由 10〜31颗大小为 26±5nm的立方八面体或立方 体磁小体组成的磁小体链。磁小体晶体主要组成为铁、氧, 颗粒处于超顺磁性磁畴大小范围 内, 菌株生理生化特性见表 5。 对趋磁螺菌菌株
Figure imgf000004_0001
sp. ME-1基因组中负责合成磁小体的基因岛进行了分 析。 单菌落接种生长培养基, 提纯基因组 DNA (方法参考 Journal of Molecular Biology, 1961,3:208-218), 进行基因组测序获得 16SrDNA序列 (该序列如序列表 SEQ No.2所示), 进行系统发育树分析发现其属于趋磁螺菌属。获得磁小体基因岛序列(该序列如序列表 SEQ No.3、 SEQ No. l所示), 与其他几株趋磁螺菌相比, 可以发现该菌株在磁小体基因岛序列 上具有特异性。 一种采集趋磁细菌的装置, 构造如下: 一端开口的圆柱形塑料收集盒 (1);滤纸 (2);金属三脚架 (3);永久强磁铁 (4);和鱼线 (5)。 其连接关系为: 滤纸 (2)通过金属三脚架 (3)实现对圆柱形塑料收集盒 (1)开口端的密封连接, 永久强磁铁 (4)的 S极与圆柱形塑料盒 (1)的闭口端连接,鱼线 (5)与永久强磁铁 (4)的 N极连接。
4. A magnetotactic bacterial disc-shaped growth band appeared in the semi-solid medium, and the magnetotactic bacterial culture was taken out to inoculate the magnetotactic bacterial growth medium by using Dilution to Extinction Methods (see Table 4). 5. The obtained pure seed culture was separated and purified by three extreme density gradient dilution methods to obtain a pure culture strain of magnetotactic bacteria. The magnetic properties of the strains were observed by optical phase contrast microscopy. The pure growth strain Magnetospirillum sp. ME-1 with the fastest growth and the best magnetic properties was selected. The magnetobacteria strain Magnetospiri Uum sp. ME-1 of the present invention has been preserved in the China Center for Type Culture Collection, Address: Wuhan University, Wuhan, China, Date of Deposit: June 14, 2013, Accession No.: CCTCC NO: M 2013260, the classification is named: Magnetospirillum M/g «etos^r〃M»j sp. ME-1. The method is characterized in that the magnetobacteria are microaerobic bacteria, the shape of the cells is spiral, and the flagella are both ends, and the size of the cells is 2.62~4.83Χ0.44~0.62μπι, and each cell produces a 10~31 A magnetosome chain composed of a cubic octahedron or a cubic magnet body having a size of 26 ± 5 nm. The main composition of magnetosome crystals is iron and oxygen, and the particles are in the range of superparamagnetic domain size. The physiological and biochemical characteristics of the strain are shown in Table 5. Spirulina
Figure imgf000004_0001
The gene island responsible for the synthesis of magnetosomes in the sp. ME-1 genome was analyzed. Single colony inoculation of growth medium, purification of genomic DNA (method refer to Journal of Molecular Biology, 1961, 3: 208-218), genome sequencing to obtain 16SrDNA sequence (this sequence is shown in SEQ No. 2 of the Sequence Listing), for phylogeny Tree analysis found that it belongs to the genus Streptomyces. The magnetosome gene island sequence was obtained (this sequence is shown in SEQ No. 3 and SEQ No. 1 of the sequence listing), and compared with several other strains of magnetospirillum, the strain was found to have a sequence on the magnetosome gene island. Specificity. A device for collecting magnetotactic bacteria, constructed as follows: a cylindrical plastic collection box (1) with one end open; filter paper (2); a metal tripod (3); a permanent strong magnet (4); and a fishing line (5). The connection relationship is: filter paper (2) through the metal tripod (3) to the sealed end of the cylindrical plastic collection box (1) open end, the S pole of the permanent strong magnet (4) and the closed end of the cylindrical plastic box (1) Connected, the fishing line (5) is connected to the N pole of the permanent magnet (4).
所述的滤纸为快速定性滤纸, 滤纸孔径为 80〜120微米; 所述的永久强磁铁为纽扣型; 趋磁细菌采集装置使用步骤如下:  The filter paper is a fast qualitative filter paper, the filter paper has a pore size of 80~120 micrometers; the permanent strong magnet is a button type; the magnetotactic bacteria collection device uses the following steps:
①倒置采集装置, 圆柱形塑料收集盒 (1)内注满过滤除菌的原位水; 1 Inverted collection device, cylindrical plastic collection box (1) filled with in-situ water filtered and sterilized;
②用金属三脚架 (3)封上滤纸 (2), 装上磁铁 (4)及鱼线 (5) ; 2 Use a metal tripod (3) to seal the filter paper (2), install the magnet (4) and the fishing line (5);
③陲入自然水体环境中使装置立于泥水界面处且采集装置的滤纸面位于泥水界面上方 l〜2cm处, 静置 12小时; ④装置静置 12小时后取出, 卸下三脚架, 小心打开滤纸, 吸取收集盒中的收集液并在 2个小时之内进行光学显微镜观察、 电镜铜网的制作及趋磁细菌的分离培养等操作。 一种趋磁蠊菌 ME-1的发酵方法, 发 养条件是: 3 into the natural water environment to make the device stand at the mud-water interface and the filter paper surface of the collection device is located 1~2cm above the mud-water interface, and is allowed to stand for 12 hours; 4 After the device is left for 12 hours, remove it, remove the tripod, carefully open the filter paper, take up the collected liquid in the collection box and observe the optical microscope within 2 hours, the preparation of the electron microscope copper mesh and the separation and culture of the magnetotactic bacteria. . A fermenting method for the bacterium Mycobacterium ME-1, the breeding conditions are:
10L发酵罐加装生长培养基 6L, 10%接种量接种, 培养条件为 30°C, 通空气 20L/h, 搅 拌速度与 2%溶氧偶联, 补料与 pH值 6.86偶联。 趋磁螺菌
Figure imgf000005_0001
ME-1在这 种培养条件下 40小时左右长到菌体密度 OD5652.5, 可以获得 55mg/L的磁小体产量。 所述生长培养基配方是:维生素混合液 lml/l,矿物质混合液 2 ml/1,磷酸钾缓冲液 (0.1M, pH7.0 ) 10ml/l, 琥珀酸钠 0.05% (m/V), 乙酸钠 0.05% (m/V),酵母提取物 0.025% (m/V), 氯化铵 0.05% (m/V), 硫酸镁 0.01% (m/V), 柠檬酸铁 ΙΟΟμΜ, 其中维生素混合液、 矿物 质混合液需培养基灭菌后单独添加过滤除菌液。 所述补料液配方是:维生素混合液 10ml/l,矿物质混合液 20 ml/1,磷酸钾缓冲液(0.1M, pH7.0 ) lOOml/1, 琥珀酸钠 0. 5% (m/V), 乙酸钠 0. 5% (m/V), 酵母提取物 0. 25% (m/V), 氯化铵 0. 5% (m/V), 柠檬酸铁 lmM, 其中维生素混合液、 矿物质混合液需培养基灭菌后 单独添加过滤除菌液。 所述维生素混合液配方及配置方法见表 2。 所述矿物质混合液配方及配置方法见表 3。 优选培养基及补料配方如下: 生长培养基配方是: 维生素混合液 3ml/l, 矿物质混合液 2 ml/l, 己二酸 0.2% m/V, 硝 酸铵 0.05% m/V, 酵母提取物 0.05% m/V, 蛋白胨 0.25% m/V, 柠檬酸铁 150μΜ, 其中维生 素混合液、 矿物质混合液需培养基灭菌后单独添加过滤除菌液; 补料液配方是: 维生素混合液 30ml/l, 矿物质混合液 20 ml/1, 己二酸 2.0% m/V, 硝酸 铵 0.5% m/V, 酵母提取物 0.5% m/V, 蛋白胨 2.5% m/V, 柠檬酸铁 0.05% m/V, 其中维生素 混合液、 矿物质混合液在培养基灭菌后单独添加过滤除菌液。 所述维生素混合液配方及配置方法见表 2。 所述矿物质混合液配方及配置方法见表 3。 一种趋磁蠊 *¾制备超繊性磁小体中的应用, 其步骤是: 1. 发酵培养, 按照上述发酵培养方法培养趋磁螺菌菌株
Figure imgf000006_0001
ME-1 40小时 左右长到菌体密度 OD5652.5停止发酵;
The 10 L fermentor was filled with 6 L of growth medium, inoculated with 10% inoculum, culture conditions were 30 ° C, air was passed at 20 L/h, stirring speed was coupled with 2% dissolved oxygen, and the feed was coupled with pH 6.86. Magnetospirillum
Figure imgf000005_0001
ME-1 grew to a cell density of OD 565 2.5 in about 40 hours under such culture conditions, and a magnetic body yield of 55 mg/L was obtained. The growth medium formula is: vitamin mixture lml / l, mineral mixture 2 ml / 1, potassium phosphate buffer (0.1M, pH7.0) 10ml / l, sodium succinate 0.05% (m / V) , sodium acetate 0.05% (m/V), yeast extract 0.025% (m/V), ammonium chloride 0.05% (m/V), magnesium sulfate 0.01% (m/V), ferric citrate, vitamins The mixed solution and the mineral mixture solution are separately sterilized by the medium, and the filter sterilization liquid is separately added. The formula of the feed liquid is: a vitamin mixture of 10 ml / l, a mineral mixture of 20 ml / 1, a potassium phosphate buffer (0.1 M, pH 7.0) lOOml / 1, sodium succinate 0. 5% (m / V), sodium acetate 0. 5% (m/V), yeast extract 0.25% (m/V), ammonium chloride 0. 5% (m/V), ferric citrate lmM, wherein the vitamin mixture The mineral mixture solution is sterilized by the medium and the filter solution is separately added. The formulation and configuration method of the vitamin mixture are shown in Table 2. The mineral mixture formulation and configuration method are shown in Table 3. The preferred medium and feeding formula are as follows: The growth medium formula is: vitamin mixture 3 ml/l, mineral mixture 2 ml/l, adipic acid 0.2% m/V, ammonium nitrate 0.05% m/V, yeast extraction 0.05% m/V, peptone 0.25% m/V, 150μM ferric citrate, wherein the vitamin mixture and mineral mixture need to be separately sterilized by filtration to remove the bacterial solution; the formula of the feed solution is: vitamin mixture 30ml/l, mineral mixture 20 ml/1, adipic acid 2.0% m/V, ammonium nitrate 0.5% m/V, yeast extract 0.5% m/V, peptone 2.5% m/V, ferric citrate 0.05 % m/V, wherein the vitamin mixture and the mineral mixture are separately added to the filter sterilization solution after the medium is sterilized. The formulation and configuration method of the vitamin mixture are shown in Table 2. The mineral mixture formulation and configuration method are shown in Table 3. An application of a magnetostrictive 蠊*3⁄4 in the preparation of a super-magnetic magnetic body, the steps of which are: 1. Fermentation culture, culture of S. oxysporum strain according to the above fermentation culture method
Figure imgf000006_0001
ME-1 was grown to a cell density of OD 565 2.5 for about 40 hours;
2. 离心收集, 离心收集发酵培养获得的菌体; 2. Collecting by centrifugation, collecting the cells obtained by fermentation culture by centrifugation;
3. 洗涤, 用 lOmM PBS (pH7.4 ) 洗涤两次, 重悬于 PBS缓冲液中; 3. Wash, wash twice with lOmM PBS (pH 7.4), and resuspend in PBS buffer;
4. 破碎细胞, 压力破碎 (1500bar) 三次; 4. Broken cells, crushed at pressure (1500 bar) three times;
5. 收集, 破碎后的菌悬液用磁铁吸附磁小体, 弃去上清, 重新用 PBS缓冲液悬浮, 50W超 声波震荡 (工作 5秒, 间歇 5秒, 共 90次) 解离细胞碎片对磁小体的包裹, 然后再吸附、 重悬, 重复 15次以上; 5. Collect, the broken bacterial suspension adsorbs the magnetic body with a magnet, discard the supernatant, resuspend in PBS buffer, and shake with 50W ultrasonic wave (working for 5 seconds, intermittent 5 seconds, a total of 90 times). Dissociation of cell debris The magnetic body is wrapped, then adsorbed, resuspended, and repeated 15 times or more;
6. 定量, 收集到的磁小体用滤纸吸干水份后称重。 本发明提供的趋磁螺菌 ME-1 生产的磁小体大小为 26±5nm。 磁畴分析 (方法参考 Geochemistry Geophysics Geosystems, 2009, 10: 1〜19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12和 Journ d Of Geophysical Research, 1975, 80: 4049-4058 ) 发现, 当在趋磁螺菌细胞内, 因磁小体在链内相互靠近而表现为单磁畴特性,磁小体相互分离即表 现为超顺磁特性。 本发明与现有技术相比, 具有以下优点和效果: 本发明提供的一种趋磁螺菌可以生产超顺磁性磁小体, 所生产的超顺磁性磁小体大小 为 26±5nm大小, 相较于人工合成的超顺磁性纳米材料, 具有外被生物膜分散性良好、 包膜 可提供大量的生物活性基团用于与其他分子共价连接、载药磁小体在体内通过降解磁小体外 膜的方式即可实现药物的释放、 具有良好的生物相容性和安全性、粒径分布范围窄、 晶形稳 定、晶体成分单一无杂质等一系列的优点。相较于以往报道的趋磁细菌所产生的单磁畴颗粒 磁小体, 由于大小只有以往报道磁小体的 1/2左右大小且具有超顺磁性, 因而在应用中不易 团聚、 分散性更好、 更不易形成血栓。 在医学领域具有极大的应用和开发潜力。 本发明提供的一种趋磁螺菌可以利用普通发酵罐进行通空气发酵生产磁小体, 发酵性 能优良, 在磁小体的产业化生产中具有极大的优势和产业化推广前景。 本发明提供的一种趋磁细菌采集装置, 设计简洁高效, 易于手工制作。 该装置用于趋 磁细菌的采集省去了以往采集泥水样品带回实验室富集的步骤,避免了实验室富集过程中趋 磁细菌多样性的损失,可以采集到自然水体中更多样天然存在的趋磁细菌从而有效的提高趋 磁细菌分离纯培养的成功率。 附图说明 图 1为一种趋磁细菌采集装置示意图。 其中: 1为一端开口的圆柱形塑料收集盒, 2为滤纸, 3为金属三脚架, 4为纽扣形永久 强磁铁, 5为鱼线。 图 2中 A为螺旋菌体形态的 MagnetospiriUum sp.ME-l及其磁小体电镜形态图。 图 2中 B为磁小体组成成分能谱图,可见磁小体区域能谱比菌体空白区域能谱图多出了 Fe、 0峰, 探针直径为 2-10nm。 图 3中 A为磁小体宽度统计分析其宽度为 23±5nm; 图 3中 B为磁小体长度统计分析其长度为 26±5nm; 统计数量为 420。 图 4中 A为一种纯化后的磁小体电镜形态图。 纯化后的磁小体, 形态大小均一, 平均大小为 26±5nm; A1为放大的磁小体, 可见其形 状为立方八面体, 箭头所示为生物膜。 图 4中 B为磁小体磁畴分布分析示意图。 磁小体磁畴特性分析,表明在磁小体在菌体内相互作用的情况下表现为单磁畴特性,磁 小体分离后无相互作用的情况下, 表现为超顺磁特性。 具体实 ¾¾¾ 下面详述本发明菌株的获得、特性分析及其发酵培养和磁小体制备方法,本发明实施例所用 试剂, 如未特别说明, 均可自常规生化试剂商店或药品经营企业购买得到 实施例 1: 一种趋磁螺菌 ME-1, 通过以下步骤筛选得到: 1 ) 趋磁细菌样品的采集和毛细管分离: 6. Quantitatively, the collected magnetosomes are weighed with a filter paper and then weighed. The magnetosome produced by the magnetospirillum ME-1 provided by the present invention has a magnetosome size of 26 ± 5 nm. Magnetic domain analysis (method reference Geochemistry Geophysics Geosystems, 2009, 10: 1-19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12 and Journ d Of Geophysical Research, 1975, 80: 4049-4058) In the magnetospirillic cells, since the magnetosomes are close to each other in the chain and exhibit a single magnetic domain characteristic, the magnetosomes are separated from each other to exhibit superparamagnetic characteristics. Compared with the prior art, the present invention has the following advantages and effects: The present invention provides a magnetic parasitic bacterium capable of producing a superparamagnetic magnetic body, and the superparamagnetic magnetic body produced has a size of 26±5 nm. Compared with the synthetic superparamagnetic nanomaterials, the biofilm has good dispersibility, and the envelope can provide a large number of bioactive groups for covalent attachment with other molecules, and the drug-loaded magnetosomes can degrade magnetically in vivo. The small extracorporeal membrane can achieve a series of advantages such as drug release, good biocompatibility and safety, narrow particle size distribution, stable crystal form, and single crystal component without impurities. Compared with the single magnetic domain particle magnetosome produced by the magnetotactic bacteria reported in the past, the size is only about 1/2 of the size of the magnetic body previously reported and has superparamagnetism, so it is not easy to agglomerate and disperse in application. Good, less likely to form a blood clot. It has great application and development potential in the medical field. The magnetic spirulina provided by the invention can use the common fermenter to produce magnetic bodies by air fermentation, and has excellent fermentation performance, and has great advantages and industrialization promotion prospects in the industrial production of magnetic bodies. The invention provides a magnetotactic bacteria collecting device which is simple and efficient in design and easy to manufacture by hand. The device is used for the collection of magnetotactic bacteria, which eliminates the step of collecting the muddy water samples back to the laboratory for enrichment, avoiding the trend in the laboratory enrichment process. The loss of the diversity of the magnetic bacteria can collect more natural magnetotactic bacteria in the natural water body, thereby effectively improving the success rate of the separation culture of the magnetotactic bacteria. BRIEF DESCRIPTION OF THE DRAWINGS FIG. 1 is a schematic view of a magnetotactic bacteria collection device. Among them: 1 is a cylindrical plastic collection box with one end open, 2 is filter paper, 3 is a metal tripod, 4 is a button-shaped permanent strong magnet, and 5 is a fishing line. In Fig. 2, A is a spiral microscopic morphology of Magnetospiri Uum sp. ME-1 and its magnetosome electron microscopic morphology. In Fig. 2, B is the energy spectrum of the composition of the magnetosome, and it can be seen that the energy spectrum of the magnetosome is larger than the energy spectrum of the blank region of the cell, and the probe has a diameter of 2-10 nm. In Fig. 3, A is a statistical analysis of the width of the magnetosome, and its width is 23±5 nm ; in Fig. 3, B is a statistical analysis of the length of the magnetosome, and its length is 26±5 nm; the statistical quantity is 420. In Fig. 4, A is a morphological view of a purified magnetosome. The purified magnetosomes have a uniform size and an average size of 26±5 nm. A1 is an enlarged magnetosome, and its shape is a cubic octahedron, and the arrow shows a biofilm. In Fig. 4, B is a schematic diagram of magnetic domain distribution analysis of magnetic bodies. The analysis of the magnetic domain characteristics of the magnetosome shows that the magnetosome exhibits a single magnetic domain characteristic in the case of interaction between the magnetosomes, and the superparamagnetic property appears in the absence of interaction after separation of the magnetosomes. Specifically, the following is a detailed description of the obtaining, characterization, and fermentation culture and preparation method of the magnetic body of the present invention. The reagents used in the examples of the present invention can be purchased from a conventional biochemical reagent store or a pharmaceutical business enterprise unless otherwise specified. Example 1: A magnetospirillum ME-1 was screened by the following procedure: 1) Collection and capillary separation of magnetotactic bacteria samples:
( 1 ) 趋磁细菌采集: 倒置采集装置, 圆柱形塑料收集盒 1内注满过滤除菌的原位水 (原位 水收集自紧靠泥水界面处的水样, 0.22μπι滤膜过滤除菌), 用金属三脚架 3封上滤纸 2, 装 上磁铁 4及鱼线 5陲入自然水体环境中,使装置立于泥水界面处且采集装置滤纸面位于泥水 界面上方 l〜2cm处, 放置 12小时后取出, 卸下三脚架, 小心地打开滤纸, 吸取收集盒中 的收集液并在 2个小时之内进行光学显微镜观察、电镜铜网的制作及趋磁细菌的分离培养等 操作。 (1) Magnetotactic bacteria collection: Inverted collection device, cylindrical plastic collection box 1 filled with filtered in-situ water (in situ The water is collected from the water sample at the interface of the mud and water, filtered and sterilized by 0.22μπ filter membrane. The filter paper 2 is sealed with a metal tripod 3, and the magnet 4 and the fishing line 5 are placed in the natural water environment to make the device stand in the muddy water. At the interface, the filter paper surface of the collection device is located at 1~2cm above the mud-water interface. After 12 hours of storage, remove it, remove the tripod, carefully open the filter paper, and take the collected liquid from the collection box and observe it under optical microscope within 2 hours. The fabrication of an electron microscope copper mesh and the separation and culture of magnetotactic bacteria.
(2 ) 趋磁细菌的毛细管分离: 采集装置采集的样品, 用相差显微镜悬滴法观察收集情况, 对观察到较多趋磁细菌的样品利用毛细管 Race-track (RT )法 ^法参- 考 FEMS Microbiology Letters, 1987, 45: 31-35 ) 进一步纯化, 获得趋磁细菌培养种子液。 所述的趋磁细菌采集装置为:一端开口的圆柱形塑料收集盒 1 ;滤纸 2 ;金属三脚架 3 ; 永久强磁铁 4; 和鱼线 5。 其连接关系为: 滤纸 2通过金属三脚架 3实现对圆柱形塑料收集 盒 1开口端的密封连接, 永久强磁铁 4的 S极与圆柱形塑料盒 1的闭口端连接, 鱼线 5与 永久强磁铁 4的 N极连接, 详见图 1。 所述的滤纸为快速定性滤纸, 滤纸孔径为 80〜120微米; 所述的永久强磁铁为纽扣型; (2) Capillary separation of magnetotactic bacteria: Samples collected by the collection device were observed by phase contrast microscopy, and samples of more magnetotactic bacteria were observed using capillary Race-track (RT) method. FEMS Microbiology Letters, 1987, 45: 31-35) Further purification was carried out to obtain a magnetotactic bacterial culture seed solution. The magnetotactic bacteria collecting device is: a cylindrical plastic collecting box 1 with one end open; a filter paper 2; a metal tripod 3; a permanent strong magnet 4; and a fishing line 5. The connection relationship is as follows: The filter paper 2 is connected to the open end of the cylindrical plastic collecting box 1 through the metal tripod 3, and the S pole of the permanent strong magnet 4 is connected with the closed end of the cylindrical plastic box 1, the fishing line 5 and the permanent strong magnet 4 The N pole connection is shown in Figure 1. The filter paper is a fast qualitative filter paper, the filter paper has a pore size of 80~120 microns; the permanent strong magnet is a button type;
2 ) 趋磁细菌的初步培养 获得趋磁细菌种子液接种氧-硫梯度培养基, 30°C培养 7天以上直到半固体培养基中获 得趋磁细菌盘状生长条带。取出培养物,相差显微镜悬滴法观察确认有趋磁细菌生长的培养 物作为趋磁细菌纯培养分离的种子液。 所述的氧-硫梯度培养基配方见表 1 2) Preliminary culture of magnetotactic bacteria The magnetotactic bacterial seed solution was inoculated with an oxygen-sulfur gradient medium, and cultured at 30 ° C for 7 days or more until a magnetotactic bacterial disc-shaped growth band was obtained in the semi-solid medium. The culture was taken out, and the culture having the growth of the magnetotactic bacteria was confirmed by a phase contrast microscope hanging drop method as a seed liquid for pure culture separation of the magnetotactic bacteria. The formulation of the oxygen-sulfur gradient medium is shown in Table 1.
表 1氧 -硫梯度培养基配方  Table 1 Oxygen-sulfur gradient medium formula
上层氧层培 ¾配方  Upper oxygen layer culture 3⁄4 formula
成分 含 J 单位 原位水 200 ml 维生素混合液 1 ml 矿物质混合液 (不含' 2 ml 琥珀酸钠 0.05 g 酵母提取物 0.05 g
Figure imgf000009_0001
Ingredients containing J unit in situ water 200 ml vitamin mixture 1 ml mineral mixture (excluding ' 2 ml sodium succinate 0.05 g yeast extract 0.05 g
Figure imgf000009_0001
MgS04 0.05 g 磷酸钾缓冲液 (pH7.0 ) 0.5 mM 刃天青 2 mg 琼脂 2 g 蒸馏水 800 ml 其中原位水为取自样品采集水域泥水界面并 0.22μπι滤膜过滤除菌, 培养 基调 ρΗ7.0, 灭菌, 补加 1ml无菌 0.01M柠檬酸铁 (ΙΟμΜ) 和中性化处 理并过滤除菌后的半胱氨酸盐酸盐 (1%母液 10ml) (0.01%)。 厌氧管盖 子拧松放置。 10ml上层培养基加在底层 (硫层) 上, 放置至少 24小时 形成梯度后接种。 MgS0 4 0.05 g Potassium phosphate buffer (pH 7.0) 0.5 mM Resazurin 2 mg Agar 2 g Distilled water 800 ml The in-situ water is taken from the mud-water interface of the sample collection water and filtered by 0.22μπ filter. The medium is adjusted to ρΗ7 .0, sterilized, supplemented with 1 ml of sterile 0.01 M ferric citrate (ΙΟμΜ) and neutralized and filtered the sterilized cysteine hydrochloride (1% mother liquor 10 ml) (0.01%). The anaerobic tube cover is loosened. 10 ml of the upper medium was added to the bottom layer (sulfur layer) and allowed to stand for at least 24 hours to form a gradient and inoculated.
下层硫层培养基配方  Lower sulfur layer medium formula
Na2S 4 mM 琼脂 1.5 g 蒸馏水 100 ml 调 pH7.4,灭菌后每支厌氧管分装 lml于底部,凝固后再加装上层(氧层)  Na2S 4 mM agar 1.5 g Distilled water 100 ml Adjust pH 7.4, sterilize each anaerobic tube into lml at the bottom, and then add the upper layer (oxygen layer) after solidification
所述的维生素混合液配方及配置方法见表 2 The formula and configuration method of the vitamin mixture are shown in Table 2
表 2维生素混合液配方  Table 2 vitamin mixture formula
成分 会 a骨里 单位 生物素 (Biotin) 2.000 mg 叶酸 (Folic acid) 2.000 mg 维生素 B6(Pyridoxine-HCl) 10.000 mg 维生素 Bl(Thiamine-HCl x 2 H20) 5.000 mg 维生素 B2(Riboflavin) 5.000 mg 维生素 B3(Nicotinic acid) 5.000 mg 泛酸钙 ( D-Ca-pantothenate ) 5.000 mg 维生素 B12 (Vitamin B 12 ) 0.100 mg 对氨基苯甲酸 (p-Aminobenzoic 5.000 mg acid) Ingredients: Biotin 2.000 mg Folic acid 2.000 mg Vitamin B6 (Pyridoxine-HCl) 10.000 mg Vitamin Bl (Thiamine-HCl x 2 H 2 0) 5.000 mg Vitamin B2 (Riboflavin) 5.000 mg Vitamin B3 (Nicotinic acid) 5.000 mg D-Ca-pantothenate 5.000 mg Vitamin B 12 (Vitamin B 12 ) 0.100 mg p-Aminobenzoic 5.000 mg Acid)
硫辛酸 (Lipoic acid) 5.000 mg Lipoic acid 5.000 mg
MilliQ水 10 00.000 ml 顺序溶解, 0.22μπι过滤后 4°C保存备用。 所述的矿物质混合液配方见表 3 MilliQ water 10 00.000 ml was dissolved in sequence, filtered at 0.22 μm and stored at 4 ° C until use. The formulation of the mineral mixture is shown in Table 3.
表 3矿物质混合液配方  Table 3 Mineral mixture formula
成分 会 a骨里 单位 氮川三醋酸 (Nitrilotriacetic acid) 1.500 g 七水硫酸镁 (MgS04'7H20) 3.000 g 二水硫酸锰 (MnSCV2H20) 0.500 g 氯化钠 (NaCl) 1.000 g 七水硫酸亚铁 (FeS04'7H20) 0.100 g 七水硫酸钴 (CoSCV7H20) 0.180 g 二水氯化钙 (CaCl2'2H20) 0.100 g 七水硫酸锌 (ZnSCV7H20) 0.180 g 五水硫酸铜 (CuS04'5H20) 0.010 g 十二水硫酸铝钾 (KA1(S04)2-12 Ingredients: Nitrilotriacetic acid 1.500 g Magnesium sulfate heptahydrate (MgS0 4 '7H 2 0) 3.000 g Manganese sulfate dihydrate (MnSCV2H 2 0) 0.500 g Sodium chloride (NaCl) 1.000 g Seven Ferrous sulfate (FeS0 4 '7H 2 0) 0.100 g Cobalt sulfate heptahydrate (CoSCV7H 2 0) 0.180 g Calcium chloride dihydrate (CaCl 2 '2H 2 0) 0.100 g Zinc sulfate heptahydrate (ZnSCV7H 2 0) 0.180 g Copper sulfate pentahydrate (CuS0 4 '5H 2 0) 0.010 g Potassium aluminum sulfate dodecahydrate (KA1(S0 4 ) 2 -12
0.020 g ¾0)  0.020 g 3⁄40)
硼酸 (H3B03) 0.010 g 二水钼酸钠 (Na2Mo04'2H20) 0.010 g 六水氯化镍 (Ν ¾·6Η20) 0.025 g 五水硒酸钠 (Na2Se03'5H20) 0.300 mgBoric acid (H 3 B0 3 ) 0.010 g Sodium molybdate dihydrate (Na 2 Mo0 4 '2H 2 0) 0.010 g Nickel hexahydrate (Ν 3⁄4·6Η 2 0) 0.025 g Sodium selenate (Na 2 Se0) 3 '5H 2 0) 0.300 mg
MilliQ水 10 00.000 ml 首先用 KOH调 pH6.5溶解氮川三醋酸用, 然后加各矿物质, 最终 KOH 调 ρΗ7.0, 0.22μπι过滤后 4°C保存备用。 MilliQ water 10 00.000 ml First dissolve nitrous triacetate with KOH adjusted to pH 6.5, then add each mineral, and finally KOH ρ7.0, 0.22μπι filter and store at 4 °C.
3) Magnetospirillum sp. ME-1菌株单菌落的获得 趋磁细菌初培养物接种厌氧管中趋磁细菌生长培养基。 30°C培养 7天以上直到半固体培 养基中获得趋磁细菌盘状生长条带。取出培养物,相差显微镜悬滴法观察确认有趋磁细菌的 生长,培养物作为纯培养物分离的种子液采用极限梯度稀释法分离三次 (方法参考 The lSME Journal, 2012, 6: 440-450)。 获得一种生长快, 磁性好的趋磁细菌菌株 ME-1 , 该菌株已于 2013年 6月 14日送往中国典型培养物保藏中心保藏,分类命名:趋磁螺菌 MagnetospirU m sp. ME-1 , 保藏编号: CCTCC NO: M 2013260, 地址: 中国 武汉 武汉大学。 所述的趋磁细菌生长培养基配方见表 4 表 4趋磁细菌生长培养基配方 成分 会 a骨里 单位 维生素混合液 1 ml 矿物质混合液 2 ml 磷酸钾缓冲液 (pH7.0 ) 1 mM 琥珀酸钠 0.1 g 乙酸钠 0.1 g 酵母提取物 0.05 g 3) Magnetospirillum sp. ME-1 strain Single colony obtained The magnetomic bacteria primary culture was inoculated with the magnetotactic bacterial growth medium in the anaerobic tube. The culture was carried out at 30 ° C for more than 7 days until a magnetotactic bacterial disc-shaped growth band was obtained in the semi-solid medium. The culture was taken out and observed by phase contrast microscopy to confirm the presence of magnetotactic bacteria. For growth, the culture was separated as a seed solution of pure culture by limiting gradient dilution three times (method reference to The lSME Journal, 2012, 6: 440-450). A fast-growing, magnetically good magnetotactic bacterial strain ME-1 was obtained, which was sent to the China Center for Type Culture Collection for preservation on June 14, 2013. The classification was named: MagnetospirU m sp. ME- 1 , Deposit No.: CCTCC NO: M 2013260, Address: Wuhan University, Wuhan, China. The structure of the magnetotactic bacteria growth medium is shown in Table 4. Table 4 Magnetotactic bacteria growth medium formula ingredients will be a bone unit vitamin mixture 1 ml mineral mixture 2 ml potassium phosphate buffer (pH 7.0) 1 mM Sodium succinate 0.1 g sodium acetate 0.1 g yeast extract 0.05 g
NH4C1 0.1 g NH 4 C1 0.1 g
MgS04 0.1 g 柠檬酸铁 20 μΜ 琼脂 2 g 蒸馏水 1000 ml MgS0 4 0.1 g ferric citrate 20 μΜ agar 2 g distilled water 1000 ml
4 ) Magnetospirillum sp. ME-1菌株形态及生理生化特性分析 利用光学显微镜和电子显微镜对获得的菌株 ME-1进行形态观察, 发现其为螺旋菌, 两 端生鞭毛, 体内含有 10〜31颗磁小体组成的磁小体链, 菌体大小 2.62〜4.83Χ0.44〜0.62μπι, 两 端生鞭毛。 X-射线能谱 (XEDS )分析发现其磁小体晶体为 Fe、 0组成(图 2 )。参考 (Jnternationa! Journal of Systematic Bacteriology , 1981, 31 :452-455 ) 的方法对 ME-1进行生理生化试验, 获 得其生理生化特性见表 5。 4) Morphological and physiological and biochemical characteristics of Magnetospirillum sp. ME-1 strains Morphological observation of the obtained strain ME-1 by optical microscopy and electron microscopy revealed that it was a spirochete with flagella at both ends and 10 to 31 magnetic bodies in the body. The small body consists of a magnetosome chain with a cell size of 2.62~4.83Χ0.44~0.62μπι, with flagella at both ends. X-ray energy spectroscopy (XEDS) analysis revealed that the magnetosome crystals were composed of Fe and 0 (Fig. 2). Refer to (Jnternationa! Journal of Systematic Bacteriology, 1981, 31: 452-455) for physiological and biochemical tests on ME-1, and obtain physiological and biochemical properties as shown in Table 5.
表 5趋磁螺菌 Magnetospirillum sp. ME-1菌株的形态及生理生化特性  Table 5 Morphological, physiological and biochemical characteristics of Magnetospirillum sp. ME-1 strain
菌株 ME-1  Strain ME-1
菌体大小 2.62~4.83Χ0.44~0.62μπι 磁小体大小 26nm 过氧化氢酶活性 - 氧化酶活性 + 磷酸酶活性 - 硫酸酶活性 - 脲酶活性 + 酪素及淀粉水解活性 - 马尿酸及七叶灵水解活性 + 硝酸盐还原到亚硝酸盐 - 硝酸盐跨亚硝酸盐还原 + 氨产生 - 明胶液化活性 - 吲垛试验 - 硫化氢产生 -The size of the bacteria is 2.62~4.83Χ0.44~0.62μπι. The magnetic body size is 26nm. Catalase Activity - Oxidase Activity + Phosphatase Activity - Sulfate Activity - Urease Activity + Casein and Starch Hydrolytic Activity - Hydrolysis Activity of Hippuric Acid and Heptaline + Reduction of Nitrate to Nitrite - Nitrate Cross-Nitrous Acid Salt reduction + ammonia production - gelatin liquefaction activity - hydrazine test - hydrogen sulphide production -
1%甘氨酸生长 - l%NaCl生长 - 可溶性荧光素产生 - 培养后期球形体 + 聚 β羟基丁酸 (ΡΗΒ ) + 实施例 2: 1% glycine growth - l% NaCl growth - soluble fluorescein production - late culture spheroid + poly beta hydroxybutyrate (ΡΗΒ) + Example 2:
Magnetospirillum sp. ME-1菌株的系统发育和基因岛分析 Phylogeny and gene island analysis of Magnetospirillum sp. ME-1 strain
1 ) 基因组提取 采用玻璃棒搅拌法提取菌株 ME-1的基因组 DNA (方法参考 of Molecular Biology, 1961,3:208-218)„ Roche GS FLX shotgun建库, Roche GS FLX Titanium System 454测序仪 测序, 序列拼接后产生 79COntigs。 1) Genomic extraction Genomic DNA of strain ME-1 was extracted by glass rod stirring method (Method reference of Molecular Biology, 1961, 3: 208-218) „ Roche GS FLX shotgun database, Roche GS FLX Titanium System 454 sequencer sequencing, The sequence is spliced to produce 79 CO ntigs.
2 )测得的菌株 16SrDNA序列(该序列如序列表 SEQ ID No.2所示)进行系统发育分析, 发 现该菌株属于 Magentospirillum属,菌株 16SrDNA序列分另 !J与 Magentospirillum magneticum AMB-1、 Magentospirillum magnetotactic mMS-l Magentospirillum gryphiswaldenseMSK- 1 的 16SrDNA序列具有 99.4%、 98.1%、 96.3%的序列相似性, 傲命名为 MagentospiriUum sp. ME-1„ 2) The measured strain 16SrDNA sequence (this sequence is shown in SEQ ID No. 2 of the Sequence Listing) was subjected to phylogenetic analysis, and it was found that the strain belongs to the genus Magentospirillum, and the sequence of the strain 16SrDNA is different! J and Magentospirillum magneticum AMB-1, Magentospirillum magnetotactic mMS-l Magentospirillum gryphiswaldenseMSK- 1 The 16SrDNA sequence has 99.4%, 98.1%, and 96.3% sequence similarity, and is proudly named MagentospiriUum sp. ME-1.
3 ) 利用 Mauve 软件将测得基因组与 MagentospiriUum magneticum AMB-1 ( GenBank accession NO: AP007255 ) 基因组进行比对分析, 根据比对分析结果, 获得趋磁螺菌 Magentospirillum sp. ME-磁小体基因岛组成的 contigs。采用 BD Genomewalker™Universal Kit 试剂盒填补磁小体基因岛 congtigs之间的 gaps序列, 获得的完整 ME-1磁小体基因岛序列3) The genome of MagentospiriUum magneticum AMB-1 (GenBank accession NO: AP007255) was compared and analyzed by Mauve software. According to the results of the comparison analysis, the composition of Magentospirillum sp. ME-magnetosome gene island was obtained. Contigs. The GL GenomewalkerTM Universal Kit kit was used to fill the gaps between the magnetosome gene island congtigs, and the complete ME-1 magnetosome gene island sequence was obtained.
(该序列如序列表 SEQ ID N0.3、 序列表 SEQ ID NO.1所示)。 (This sequence is shown in the Sequence Listing SEQ ID N0.3, Sequence Listing SEQ ID NO. 1).
4 ) 磁小体基因岛分析 4) Analysis of magnetosome gene islands
BLAST比对分析发现 Magentospirillum sp. ME-1磁小体基因岛由 mamGFDC、 mms6、 mamAB、 mamXY顺反子组成。其中 mamGFDC顺反子含有 mamG、 mamF、 mamD、 mamC 等 4个磁小体相关基因; mms6顺反子含有磁小体相关基因 mms6 ; mamAB顺反子含有 mamH、 maml、 mamE、 mamJ、 mamK、 mamL、 mamM、 mamN、 mamO、 mamP、 mamA、 mamQ、 mamR、 mamB、 mamS、 mamT、 mamU、 mamV等 18个磁小体相关基因; mamGFDC mms6、 mamAB序列如序列表 SEQ ID No.3所示, mamXY (该序列如序列表 SEQ ID No. l所示)含 有 mms5、 mamY、 mamX-like、 mamZ、 mamH-like、 FtsZ-like等 6个磁小体相关基因且与其 他磁小体相关基因在基因组中相距较远。 实施例 3 : The BLAST alignment analysis revealed that the Magentospirillum sp. ME-1 magnetosome gene island consisted of mamGFDC, mms6, mamAB, and mamXY cistrons. Among them, mamGFDC cistron contains four magnetosome-related genes such as mamG, mamF, mamD and mamC; mms6 cistron contains magnetosome-related gene mms6; mamAB cistron contains mamH, maml, mamE, mamJ, mamK, mamL 18 magnetosome-related genes such as mamM, mamN, mamO, mamP, mamA, mamQ, mamR, mamB, mamS, mamT, mamU, mamV; mamGFDC mms6, mamAB sequence as shown in SEQ ID No. 3 of the sequence listing, mamXY (This sequence is shown in SEQ ID No. 1 of the Sequence Listing) contains 6 magnetosome-related genes such as mms5, mamY, mamX-like, mamZ, mamH-like, and FtsZ-like, and is related to other magnetosome-related genes in the genome. The distance between them is far. Example 3:
Magnetospirillum sp. ME-1菌株的发^ ^养 将 MagnetospiriUwn sp. ME-1在 10L发酵罐中进行发酵培养试验: 具体条件为: 10L发酵罐加装生长培养基 6L, 10%接种量接种, 培养条件为 30°C, 通 空气 20L/h, 搅拌速度与 2%溶氧偶联, 补料与 pH值 6.86偶联。 趋磁螺菌 Magnetospirillmn sp. ME-1在这种培养条件下 40小时左右长到 OD5652.5。 所述的生长培养基配方是: 维生素混合液(配方见表 2 ) lml/1, 矿物质混合液(配方见 表 3 ) 2 ml/1, 磷酸钾缓冲液 ( 0.1M, pH7.0 ) 10ml/l , 琥珀酸钠 0.05% (m/V), 乙酸钠 0.05% (m/V), 酵母提取物 0.025% (m/V), 氯化铵 0.05% (m/V), 硫酸镁 0.01% (m/V), 柠檬 酸铁 100μΜ, 其中维生素混合液、 矿物质混合液需培养基灭菌后单独添加过滤除菌液。 所述补料液配方是: 维生素混合液(配方见表 2 ) 10ml/l, 矿物质混合液(配方见表 3 ) 20 ml/1,磷酸钾缓冲液(0.1M, pH7.0 ) lOOml/1,琥珀酸钠 0. 5% (m/V),乙酸钠 0. 5% (m/V), 酵母提取物 0.25% (m/V), 氯化铵 0. 5% (m/V), 柠檬酸铁 lmM, 其中维生素混合液、 矿 物质混合液需培养基灭菌后单独添加过滤除菌液。 实施例 4: The growth of Magnetospirillum sp. ME-1 strains was carried out in a 10 L fermentor with the fermentation of the Magnetospiri Uwn sp. ME-1: The specific conditions were: 10 L of fermenter was added with growth medium 6 L, inoculated with 10% inoculum, cultured The condition was 30 ° C, air was passed at 20 L/h, the stirring speed was coupled with 2% dissolved oxygen, and the feed was coupled with a pH of 6.86. Magnetospirillum Magnetospirillmn sp. ME-1 grew to OD 565 2.5 in this culture condition for about 40 hours. The growth medium formula is: Vitamin mixture (see Table 2 for formula) lml/1, mineral mixture (see Table 3 for formula) 2 ml/1, potassium phosphate buffer (0.1M, pH7.0) 10ml /l , Sodium succinate 0.05% (m/V), Sodium acetate 0.05% (m/V), Yeast extract 0.025% (m/V), Ammonium chloride 0.05% (m/V), Magnesium sulfate 0.01% (m/V), 100 μM of ferric citrate, in which the vitamin mixture and the mineral mixture are sterilized by the medium, and the filter solution is separately added. The feed liquid formula is: vitamin mixture (see Table 2 for formula) 10ml/l, mineral mixture (see Table 3 for formula) 20 ml/1, potassium phosphate buffer (0.1M, pH 7.0) lOOml/1, sodium succinate 0. 5% (m/V), sodium acetate 0. 5% (m/V), yeast extract 0.25 % (m/V), ammonium chloride 0. 5% (m/V), iron citrate lmM, wherein the vitamin mixture and the mineral mixture need to be sterilized by the medium, and the filter solution is separately added. Example 4:
Magnetospirillum sp. ME-1菌株的发^ ¾养: 将 MagnetospiriUwn sp. ME-1在 10L发酵罐中进行发酵培养试验: 具体条件为: 10L发酵罐加装生长培养基 6L, 10%接种量接种, 培养条件为 30°C, 通 空气 20L/h, 搅拌速度与 2%溶氧偶联, 补料与 pH值 6.86偶联; 趋磁螺菌 Magnetospirillmn sp. ME-1在这种培养条件下 40小时左右长到 OD5655.7。 所述的趋磁细菌为: 趋磁螺菌 Afog«etos^r〃M»j s;?. ME-1, CCTCC NO: M2013260; 所述的生长培养基配方是: 维生素混合液 3ml/l (配方见表 2),矿物质混合液 2 ml/1 (配 方见表 3 ),己二酸 0.2% m/V,硝酸铵 0.05% m/V,酵母提取物 0.05% m/V,蛋白胨 0.25% m/V, 柠檬酸铁 150μΜ,其中维生素混合液、矿物质混合液需培养基灭菌后单独添加过滤除菌液; 所述的补料液配方是: 维生素混合液 30ml/l (配方见表 2), 矿物质混合液 20 ml/1 (配方见 表 3 ), 己二酸 2.0% m/V, 硝酸铵 0.5% m/V, 酵母提取物 0.5% m/V, 蛋白胨 2.5% m/V, 柠 檬酸铁 0.05% m/V,其中维生素混合液、矿物质混合液在培养基灭菌后单独添加过滤除菌液。 实施例 5: 一种趋磁螺菌在制备超顺磁性磁小体中的应用, 其步骤是: Hairospirillum sp. ME-1 strain hair growth: Fermentation culture experiment of Magnetospiri Uwn sp. ME-1 in a 10L fermenter: The specific conditions are: 10L fermenter is equipped with 6L of growth medium, 10% inoculation amount is inoculated, The culture condition was 30 ° C, air was passed at 20 L/h, the stirring speed was coupled with 2% dissolved oxygen, and the feed was coupled with a pH of 6.86. The magnetospirilling fungus Magnetospirillmn sp. ME-1 was subjected to 40 hours under such culture conditions. It grows to the left and right to OD 565 5.7. The magnetotactic bacteria are: magnetobacteria Afog «etos^r〃M»js;?. ME-1, CCTCC NO: M2013260; the growth medium formula is: vitamin mixture 3ml / l (formulation See Table 2), mineral mixture 2 ml/1 (formulation shown in Table 3), adipic acid 0.2% m/V, ammonium nitrate 0.05% m/V, yeast extract 0.05% m/V, peptone 0.25% m /V, 150μΜ of ferric citrate, wherein the vitamin mixture and the mineral mixture need to be separately sterilized by adding the filter sterilization solution; the formula of the feed solution is: vitamin mixture 30ml/l (see Table 2 for formula) ), mineral mixture 20 ml/1 (formulation shown in Table 3), adipic acid 2.0% m/V, ammonium nitrate 0.5% m/V, yeast extract 0.5% m/V, peptone 2.5% m/V, Ferric citrate 0.05% m/V, wherein the vitamin mixture and the mineral mixture are separately added to the filter sterilization solution after the medium is sterilized. Example 5: The use of a magnetospirillum in the preparation of a superparamagnetic magnetosome, the steps of which are:
1 )发酵培养,按照实施例 3所述发酵培养方法培养趋磁螺菌菌株 M¾«etoS^W//M sp. ME-140 小时左右长到菌体密度 OD5652.5停止发酵; 1) Fermentation culture, according to the fermentation culture method described in Example 3, the culture of the diatom bacterium strain M3⁄4 « e to S ^W / / M sp. ME-140 hours to the bacterial cell density OD 565 2.5 to stop the fermentation;
2 ) 离心收集, 离心收集发酵培养获得的菌体; 2) collecting by centrifugation, collecting the cells obtained by fermentation culture by centrifugation;
3 ) 洗涤, 用 lOmM PBS (pH7.4 ) 洗涤两次, 重悬于 PBS缓冲液中; 3) Wash, wash twice with lOmM PBS (pH 7.4), and resuspend in PBS buffer;
4 ) 破碎细胞, 压力破碎 (1500bar) 三次; 4) Broken cells, crushed at pressure (1500 bar) three times;
5 )收集, 破碎后的菌悬液用磁铁吸附磁小体, 弃去上清, 重新用 PBS缓冲液悬浮, 50W超 声波震荡 (工作 5秒, 间歇 5秒, 共 90次) 解离细胞碎片对磁小体的包裹, 然后再吸附、 重悬, 重复 15次以上; 5) Collect, the broken bacterial suspension adsorbs the magnetic body with a magnet, discards the supernatant, and resuspend in PBS buffer, 50W ultrasonic vibration (working for 5 seconds, intermittent 5 seconds, a total of 90 times) Dissociation of cell debris The magnetic body is wrapped and then adsorbed, Resuspend, repeat 15 times or more;
6 ) 定量, 收集到的磁小体用滤纸吸干水份后称重; Magnetospirillum sp. ME- 1发酵培养 40 小时左右的培养物, 可以获得 55mg/L的产量。 利用实施例 4中培养基及培养条件获得的发酵液, 其磁小体的产量为 177mg/L。 6) Quantitatively, the collected magnetosomes are weighed with a filter paper and weighed; Magnetospirillum sp. ME-1 is fermented for about 40 hours to obtain a yield of 55 mg/L. The fermentation broth obtained in the medium and the culture conditions of Example 4 had a magnetic body yield of 177 mg/L.
透射电镜观察所获得的磁小体为立方八面体或立方体, 外被完整生物膜 (图 4), 颗粒大小 均一, 测量分析发现其宽度为 23±5nm, 其长度为 26±5nm (附图 3 )。 磁畴分析 (方法参考 Geochemistry Geophysics Geosystems, 2009, 10: 1〜19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12和 Journ d Of Geophysical Research, 1975, 80: 4049-4058 ) 发现, 其磁畴分布在超顺磁特性范围内(图 4)。 The magnetosomes obtained by transmission electron microscopy were cubic octahedrons or cubes, and the outer biofilm (Fig. 4) was uniform in particle size. The measurement showed that the width was 23±5 nm and its length was 26±5 nm (Fig. 3 ). Magnetic domain analysis (method reference Geochemistry Geophysics Geosystems, 2009, 10: 1-19; Journal of Geophysical Research-Solid Earth, 2006, 111: B 12S 12 and Journ d Of Geophysical Research, 1975, 80: 4049-4058) Its magnetic domain distribution is in the range of superparamagnetic properties (Fig. 4).

Claims

权利要求书 Claim
1. 一种趋磁螺菌, 其特征在于: 趋磁螺菌 MagnetospiriUum sp.、 ME- 1 , CCTCC NO: M 2013260„  A magnetospirillum, characterized by: magnetospirillum MagnetospiriUum sp., ME-1, CCTCC NO: M 2013260
2. —种分离的权利要求 1所述的趋磁螺菌的磁小体基因岛, 其序列为 SEQ ID N0.1所示。 2. The isolated magnetosome gene island of the genus Streptomyces according to claim 1, the sequence of which is represented by SEQ ID N0.1.
3. 一种分离的权利要求 1所述的趋磁螺菌的磁小体基因岛, 其序列为 SEQ ID N0.3所示。 3. An isolated magnetosome gene island of the genus Streptomyces according to claim 1, the sequence of which is represented by SEQ ID N0.3.
4. 一种分离的权利要求 1所述的趋磁螺菌的 16Sr DNA, 其序列为 SEQ ID N0.2所示。 4. An isolated 16Sr DNA of the genus Streptomyces according to claim 1, the sequence of which is represented by SEQ ID NO.
5. 权利要求 1所述的一种趋磁螺菌 ME-1的发酵方法, 发酵培养条件是: 5. The method of fermenting a magnetospirillum ME-1 according to claim 1, wherein the fermentation culture condition is:
10L发酵罐加装生长培养基 6L, 趋磁细菌以 10%接种量接种, 培养条件为 30°C, 通空 气 20L/h, 搅拌速度与 2%溶氧偶联, 补料与 pH值 6.86偶联; 所述的趋磁细菌为: 趋磁螺菌 Afog«etos^r〃M»j s;?. ME-1, CCTCC NO: M2013260; 所述的生长培养基配方是: 维生素混合液 lml/l, 矿物质混合液 2 ml/l, 0.1M, pH7.0的 磷酸钾缓冲液 10ml/l,琥珀酸钠 0.05% m/V, 乙酸钠 0.05% m/V,酵母提取物 0.025% m/V, 氯化铵 0.05% m/V, 硫酸镁 0.01% m/V, 柠檬酸铁 ΙΟΟμΜ, 其中维生素混合液、 矿物质混合 液需培养基灭菌后单独添加过滤除菌液; 所述的补料液配方是: 维生素混合液 10ml/l, 矿物质混合液 20 ml/l, 0.1M, pH7.0的磯 酸钾缓冲液 100ml/l, 琥珀酸钠 0. 5% m/V, 乙酸钠 0. 5% m/V, 酵母提取物 0. 25% m/V, 氯 化铵 0. 5% m/V, 柠檬酸铁 lmM, 其中维生素混合液、矿物质混合液在培养基灭菌后单独添 加过滤除菌液; 维生素混合液的配方为: 成分 含量 单位 生物素 2.000 mg; 叶酸 2.000 mg; 维生素 B6 10.000 mg; 维生素 B 1 5.000 mg; 维生素 B2 5.000 mg; 维生素 B3 5.000 mg; 泛酸钙 5.000 mg; 维生素 B12 0.100 mg; 对氨基苯甲酸 5.000 mg; 硫辛酸 5.000 mg; 水 10L fermenter is equipped with 6L of growth medium, and the magnetotactic bacteria are inoculated with 10% inoculum. The culture condition is 30°C, the air is 20L/h, the stirring speed is coupled with 2% dissolved oxygen, and the feeding and pH value is 6.86. The magnetotactic bacteria are: magnetospirillum Afog «etos^r〃M»js;?. ME-1, CCTCC NO: M2013260; the growth medium formula is: vitamin mixture lml/l , mineral mixture 2 ml / l, 0.1 M, pH 7.0 potassium phosphate buffer 10 ml / l, sodium succinate 0.05% m / v, sodium acetate 0.05% m / V, yeast extract 0.025% m / v , ammonium chloride 0.05% m/V, magnesium sulfate 0.01% m/V, iron citrate ΜμΜ, wherein the vitamin mixture and the mineral mixture are sterilized by the medium, and the filter sterilizing solution is separately added; The liquid formulation is: vitamin mixture 10ml / l, mineral mixture 20 ml / l, 0.1M, pH 7.0 potassium citrate buffer 100ml / l, sodium succinate 0. 5% m / v, sodium acetate 0 5% m/V, yeast extract 0.25% m/V, ammonium chloride 0. 5% m/V, ferric citrate lmM, wherein the vitamin mixture and mineral mixture are separately sterilized in the medium Add filter sterilization solution; vitamin Formulation combined solution was: Component Amount Unit biotin 2.000 mg; Folic acid 2.000 mg; Vitamin B6 10.000 mg; Vitamin B 1 5.000 mg; Vitamin B2 5.000 mg; Vitamin B3 5.000 mg; calcium pantothenate 5.000 mg; vitamin B12 0.100 mg; p-aminobenzoic acid 5.000 mg; lipoic acid 5.000 mg; water
矿物质混合液的配方为: The formulation of the mineral mixture is:
成分 含量 单位 氮川三醋酸 1.500 g; 七水硫酸镁 3.000 g; 二水硫酸锰 0.500 g; 氯化钠 1.000 g; 七水硫酸亚铁 0.100 g; 七水硫酸钴 0.180 g; 二水氯化钙 0.100 g; 七水硫酸锌 0.180 g; 五水硫酸铜 0.010 g; 十二水硫酸铝钾 0.020 g; Ingredient content unit Nitrogen triacetate 1.500 g; magnesium sulfate heptahydrate 3.000 g; manganese sulfate dihydrate 0.500 g; sodium chloride 1.000 g; ferrous sulfate heptahydrate 0.100 g; cobalt sulfate heptahydrate 0.180 g; calcium chloride dihydrate 0.100 g; zinc sulfate heptahydrate 0.180 g; copper sulfate pentahydrate 0.010 g; potassium aluminum sulfate dodecahydrate 0.020 g;
0.010 二水钼酸钠 0.010 g; 六水氯化镍 0.025 五水硒酸钠 0.300 mg; 水 1000.000 ml„ 0.010 dihydrate molybdate 0.010 g; hexahydrate nickel chloride 0.025 pentahydrate sodium selenate 0.300 mg; Water 1000.000 ml
6. 权利要求 1所述的一种趋磁螺菌 ME-1的发酵方法, 发酵培养条件是:  6. The method of fermenting a magnetospirillum ME-1 according to claim 1, wherein the fermentation culture condition is:
10L发酵罐加装生长培养基 6L, 趋磁细菌以 10%接种量接种, 培养条件为 30°C, 通空 气 20L/h, 搅拌速度与 2%溶氧偶联, 补料与 pH值 6.86偶联; 所述的趋磁细菌为: 趋磁螺菌 Afog«etos^r〃M»j s;?. ME-1, CCTCC NO: M2013260; 所述的生长培养基配方是:维生素混合液 3ml/l,矿物质混合液 2 ml/1,己二酸 0.2% m/V, 硝酸铵 0.05% m/V, 酵母提取物 0.05% m/V, 蛋白胨 0.25% m/V, 柠檬酸铁 150μΜ, 其中维 生素混合液、 矿物质混合液需培养基灭菌后单独添加过滤除菌液; 所述的补料液配方是:维生素混合液 30ml/l,矿物质混合液 20 ml/1, 己二酸 2.0% m/V, 硝酸铵 0.5% m/V, 酵母提取物 0.5% m/V, 蛋白胨 2.5% m/V, 柠檬酸铁 0.05% m/V, 其中维 生素混合液、 矿物质混合液在培养基灭菌后单独添加过滤除菌液。 维生素混合液的配方为: 成分 含量 单位 生物素 2.000 mg; 叶酸 2.000 mg; 维生素 B6 10.000 mg; 维生素 B1 5.000 mg; 维生素 B2 5.000 mg; 维生素 B3 5.000 mg; 泛酸钙 5.000 mg; 维生素 B 12 0.100 mg; 对氨基苯甲酸 5.000 mg; 硫辛酸 5.000 mg; 水 矿物质混合液的配方为: 成分 含』 单位 氮川三醋酸 1.500 g; 七水硫酸镁 3.000 g: 10L fermenter is equipped with 6L of growth medium, and the magnetotactic bacteria are inoculated with 10% inoculum. The culture condition is 30°C, the air is 20L/h, the stirring speed is coupled with 2% dissolved oxygen, and the feeding and pH value is 6.86. The magnetotactic bacteria are: magnetobacteria Afog «etos^r〃M»js;?. ME-1, CCTCC NO: M2013260; the growth medium formula is: vitamin mixture 3ml/l , mineral mixture 2 ml/1, adipic acid 0.2% m/V, ammonium nitrate 0.05% m/V, yeast extract 0.05% m/V, peptone 0.25% m/V, ferric citrate 150μΜ, vitamin The mixed solution and the mineral mixture solution are separately sterilized by the culture medium, and the filter solution is separately added; the formula of the feed liquid is: vitamin mixture 30 ml/l, mineral mixture 20 ml/1, adipic acid 2.0% m/V, ammonium nitrate 0.5% m/V, yeast extract 0.5% m/V, peptone 2.5% m/V, ferric citrate 0.05% m/V, in which the vitamin mixture and mineral mixture are eliminated in the medium The filter sterilization solution was added separately after the bacteria. The formula of the vitamin mixture is: ingredient content biotin 2.000 mg; folic acid 2.000 mg; vitamin B6 10.000 mg; vitamin B1 5.000 mg; vitamin B2 5.000 mg; vitamin B3 5.000 mg; calcium pantothenate 5.000 mg; vitamin B 12 0.100 mg; P-aminobenzoic acid 5.000 mg; lipoic acid 5.000 mg; water The formula of the mineral mixture is: The composition contains 』 unit of Nitrogen triacetate 1.500 g ; magnesium sulfate heptahydrate 3.000 g :
:水硫酸锰 0.500 g; 氯化钠 1.000 g; 七水硫酸亚铁 0.100 g: 七水硫酸钴 0.180 g; : water manganese sulfate 0.500 g ; sodium chloride 1.000 g ; ferrous sulfate heptahydrate 0.100 g : cobalt sulfate heptahydrate 0.180 g ;
:水氯化钙 0.100 g; 七水硫酸锌 0.180 g; 五水硫酸铜 0.010 g; 十二水硫酸铝钾 0.020 g; : water calcium chloride 0.100 g ; zinc sulfate heptahydrate 0.180 g ; copper sulfate pentahydrate 0.010 g ; potassium sulfate aluminum sulfate 0.020 g ;
0.010 g; 二水钼酸钠 0.010 g; 六水氯化镍 0.025 g; 五水硒酸钠 0.300 mg; 水 1000.000 ml o 0.010 g ; sodium molybdate dihydrate 0.010 g ; nickel chloride hexahydrate 0.025 g ; sodium selenate pentahydrate 0.300 mg ; water 1000.000 ml o
7. 一种采集趋磁细菌的装置, 其特征在于: 包括一端开口的圆柱形塑料收集盒 ( 1), 滤纸 (2) 通过金属三脚架 (3)对圆柱形塑料收集盒 (1)开口端密封连接, 永久强磁铁 (4)的 S极与圆柱形 塑料盒 ( 1)的闭口端连接, 鱼线 (5)与永久强磁铁 (4)的 N极连接; 所述的滤纸为快速定性滤纸, 滤纸孔径为 80〜120微米; 所述的永久强磁铁为纽扣型。 7. A device for collecting magnetotactic bacteria, comprising: a cylindrical plastic collecting box (1) having an opening at one end, and a filter paper (2) sealing the open end of the cylindrical plastic collecting box (1) by a metal tripod (3) Connecting, the S pole of the permanent strong magnet (4) is connected to the closed end of the cylindrical plastic case (1), and the fishing line (5) is connected to the N pole of the permanent strong magnet (4); the filter paper is a fast qualitative filter paper, The filter paper has a pore size of 80 to 120 μm; and the permanent strong magnet is a button type.
8. 权利要求 1所述的一种趋磁螺菌在生产超顺磁性磁小体中的应用。 8. Use of a magnetospirillum of claim 1 for producing a superparamagnetic magnetosome.
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