WO2014059422A1 - Novel process for making compounds for use in the treatment of cancer - Google Patents
Novel process for making compounds for use in the treatment of cancer Download PDFInfo
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- WO2014059422A1 WO2014059422A1 PCT/US2013/064866 US2013064866W WO2014059422A1 WO 2014059422 A1 WO2014059422 A1 WO 2014059422A1 US 2013064866 W US2013064866 W US 2013064866W WO 2014059422 A1 WO2014059422 A1 WO 2014059422A1
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- 0 *N(C1)CC1([C@](CCCC1)N1[C@](CO)c1ccccc1)O Chemical compound *N(C1)CC1([C@](CCCC1)N1[C@](CO)c1ccccc1)O 0.000 description 7
- ILSCRNPCQIFVHY-CABCVRRESA-N OC[C@H](c1ccccc1)N(CCCC1)[C@@H]1C1(CNC1)O Chemical compound OC[C@H](c1ccccc1)N(CCCC1)[C@@H]1C1(CNC1)O ILSCRNPCQIFVHY-CABCVRRESA-N 0.000 description 6
- NXRQXCFBZGIRGN-UHFFFAOYSA-N O=C(c(ccc(F)c1F)c1F)Cl Chemical compound O=C(c(ccc(F)c1F)c1F)Cl NXRQXCFBZGIRGN-UHFFFAOYSA-N 0.000 description 3
- KAXYRJIPEGDXGR-MOPGFXCFSA-N OC[C@H](c1ccccc1)N(CCCC1)[C@@H]1C(C1)(CN1C(c(ccc(F)c1F)c1F)=O)O Chemical compound OC[C@H](c1ccccc1)N(CCCC1)[C@@H]1C(C1)(CN1C(c(ccc(F)c1F)c1F)=O)O KAXYRJIPEGDXGR-MOPGFXCFSA-N 0.000 description 3
- CUMTUBVTKOYYOU-UHFFFAOYSA-N Nc(ccc(I)c1)c1F Chemical compound Nc(ccc(I)c1)c1F CUMTUBVTKOYYOU-UHFFFAOYSA-N 0.000 description 2
- VEAULQKXCJCPRU-NSHDSACASA-N OC(C1)(CN1C(c(c(F)c1F)ccc1F)=O)[C@H]1NCCCC1 Chemical compound OC(C1)(CN1C(c(c(F)c1F)ccc1F)=O)[C@H]1NCCCC1 VEAULQKXCJCPRU-NSHDSACASA-N 0.000 description 2
- BSMCAPRUBJMWDF-KRWDZBQOSA-N OC(C1)(CN1C(c(ccc(F)c1F)c1Nc(ccc(I)c1)c1F)=O)[C@H]1NCCCC1 Chemical compound OC(C1)(CN1C(c(ccc(F)c1F)c1Nc(ccc(I)c1)c1F)=O)[C@H]1NCCCC1 BSMCAPRUBJMWDF-KRWDZBQOSA-N 0.000 description 2
- KPPVPADBUPKRSK-UHFFFAOYSA-N OC(C1)CN1C(c(ccc(F)c1F)c1F)=O Chemical compound OC(C1)CN1C(c(ccc(F)c1F)c1F)=O KPPVPADBUPKRSK-UHFFFAOYSA-N 0.000 description 2
- ASSDLFLNNKWKOB-UWVGGRQHSA-N C[C@@H](CO)N(CCCC1)[C@@H]1C1(CNC1)O Chemical compound C[C@@H](CO)N(CCCC1)[C@@H]1C1(CNC1)O ASSDLFLNNKWKOB-UWVGGRQHSA-N 0.000 description 1
- NNWUEBIEOFQMSS-ZCFIWIBFSA-N C[C@H]1NCCCC1 Chemical compound C[C@H]1NCCCC1 NNWUEBIEOFQMSS-ZCFIWIBFSA-N 0.000 description 1
Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D498/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms
- C07D498/02—Heterocyclic compounds containing in the condensed system at least one hetero ring having nitrogen and oxygen atoms as the only ring hetero atoms in which the condensed system contains two hetero rings
- C07D498/04—Ortho-condensed systems
-
- Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
- Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
- Y02P—CLIMATE CHANGE MITIGATION TECHNOLOGIES IN THE PRODUCTION OR PROCESSING OF GOODS
- Y02P20/00—Technologies relating to chemical industry
- Y02P20/50—Improvements relating to the production of bulk chemicals
- Y02P20/55—Design of synthesis routes, e.g. reducing the use of auxiliary or protecting groups
Definitions
- the invention relates to a process for making certain compounds that inhibit MEK that are useful for the treatment of hyerproliferative disorders such as cancer.
- Such compounds are described in WO2007044515, the entire contents of which is incorporated by reference, and in ACS Med. Chem Lett., 2012, 3, 416-421.
- ME 1 MAPK/ERK Kinase
- the MEK-ERK signal transduction cascade is a conserved pathway which regulates cell growth, proliferation, differentiation, and apoptosis in response to growth factors, cytokines, and hormones. This pathway operates downstream of Ras which is often upregulated or mutated in human tumors.
- MEK is a critical effector of Ras function.
- the ERK/MAPK pathway is upregulated in 30% of all tumors, and oncogenic activating mutations in K-Ras and B-Raf have been identified in 22% and 18% of all cancers respectively (Allen et al., 2003; Bamford S, 2004; Davies et al., 2002; Malumbres and Barbacid, 2003).
- a large portion of human cancers including 66% (B-Raf) of malignant melanomas, 60% (K-Ras) and 4% (B-Raf) of pancreatic cancers, 50% of colorectal cancers (colon, in particular, K-Ras: 30%, B-Raf: 15%), 20% (K-Ras) of lung cancers, 27% (B-Raf) papillary and anaplastic thyroid cancer, and 10-20% (B-Raf) of endometriod ovarian cancers, harbor activating Ras and Raf mutations.
- Inhibition of the ERK pathway results in anti-metastatic and anti-angiogenic effects largely due to a reduction of cell-cell contact and motility as well as downregulation of vascular endothelial growth factor (VEGF) expression.
- VEGF vascular endothelial growth factor
- expression of dominant negative MEK or ERK reduced the transforming ability of mutant Ras as seen in cell culture and in primary and metastatic growth of human tumor xenografts in vivo. Therefore, the MEK-ERK signal transduction pathway is an appropriate pathway to target for therapeutic intervention and compounds that target MEK present considerable therapeutic potential.
- Ring A is arylene or heteroarylene optionally substituted with one, two, three, or four groups selected from R 6 , R 7 , R 8 , and R 9 , each of which are independently selected from hydrogen, halo, halo(Ci-C8)alkyl, hydroxy, (C 1 -C 6 )alkoxy, and halo(Ci-C6)alkoxy;
- X is alkyl, halo, halo(Ci-Cg)alkyl, or halo(Cj-C6)alkoxy;
- R 1 , R 2 , R 3 , and R 4 are each independently hydrogen, (Ci-Cg)alkyl, or halo(Ci-Cg)alkyl;
- R 5 is hydrogen, halo, or (Ci-Cg)alkyl;
- a substituent "R” may reside on any atom of the ring system, assuming replacement of a depicted, implied, or expressly defined hydrogen from one of the ring atoms, so long as a stable structure is formed.
- the "R” group may reside on either the 5-membered or the 6-membered ring of the fused ring system.
- Halogen or "halo” refers to fluorine, chlorine, bromine, or iodine.
- Alkyl refers to a branched or straight hydrocarbon chain of one to eight carbon atoms, such as methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, sec-butyl, t-butyl, pentyl, hexyl, and heptyl. (Ci-C 6 )alkyl is preferred.
- alkoxy refers to a moiety of the formula -OR a , wherein R a is an (Ci-C6)alkyl moiety as defined herein.
- alkoxy moieties include, but are not limited to, methoxy, ethoxy, isopropoxy, and the like.
- Alkoxy carbonyl refers to a group -C(0)-R b wherein R b is (Ci-C 6 )alkoxy as defined herein.
- Aryl means a monovalent six- to fourteen-membered, mono- or bi-carbocyclic ring, wherein the monocyclic ring is aromatic and at least one of the rings in the bicyclic ring is aromatic. Unless stated otherwise, the valency of the group may be located on any atom of any ring within the radical, valency rules permitting. Representative examples include phenyl, naphthyl, and indanyl, and the like.
- Arylene means a divalent six- to fourteen-membered, mono- or bi-carbocyclic ring, wherein the monocyclic ring is aromatic and at least one of the rings in the bicyclic ring is aromatic.
- Representative examples include phenylene, naphthylene, and indanylene, and the like.
- (C3-C8)Cycloalkyl refers to a single saturated carbocyclic ring of three to eight ring carbons, such as cyclopropyl, cyclobutyl, cyclopentyl, and cyclohexyl. Cycloalkyl may optionally be substituted with one or more substituents, preferably one, two, or three
- cycloalkyl substituent is selected from the group consisting of (C
- C 6 )alkyl hydroxy, (Ci-C 6 )alkoxy, halo(Ci-C 6 )alkyl, halo(CrC 6 )alkoxy, halo, amino, mono- and di(Ci-C 6 )alkylamino, hetero(Ci-C 6 )alkyl, acyl, aryl, and heteroaryl.
- Cycloalkyloxycarbonyl means a group -C(O)-OR c wherein R c is (C 3 -C 6 )cycloalkyl as defined herein.
- Phenyloxycarbonyl refers to a group -C(0)-Ophenyl.
- Heteroaryl means a monocyclic, fused bicyclic, or fused tricyclic, monovalent radical of 5 to 14 ring atoms containing one or more, preferably one, two, three, or four ring heteroatoms independently selected from -0-, -S(O) n - (n is 0, 1, or 2), -N-, -N(R X )-, and the remaining ring atoms being carbon, wherein the ring comprising a monocyclic radical is aromatic and wherein at least one of the fused rings comprising a bicyclic or tricyclic radical is aromatic.
- R x is hydrogen, alkyl, hydroxy, alkoxy, acyl, or alkylsulfonyl.
- the valency may be located on any atom of any ring of the heteroaryl group, valency rules permitting. In particular, when the point of valency is located on the nitrogen, R x is absent.
- heteroaryl includes, but is not limited to, 1,2,4-triazolyl, 1,3,5-triazolyl, phthalimidyl, pyridinyl, pyrrolyl, imidazolyl, thienyl, furanyl, indolyl, 2,3-dihydro-lH-indolyl (including, for example,
- isoindolyl 2,3-dihydro-lH-indol-2-yl or 2,3-dihydro-lH-indol-5-yl, and the like), isoindolyl, indolinyl, isoindolinyl, benzimidazolyl, benzodioxol-4-yl, benzofuranyl, cinnolinyl, indolizinyl, naphthyridin-3-yl, phthalazin-3-yl, phthalazin-4-yl, pteridinyl, purinyl, quinazolinyl,
- Heteroarylene means a monocyclic, fused bicyclic, or fused tricyclic, divalent radical of 5 to 14 ring atoms containing one or more, preferably one, two, three, or four ring heteroatoms independently selected from -O-, -S(O) n - (n is 0, 1, or 2), -N-, -N(R 19 )-, and the remaining ring atoms being carbon, wherein the ring comprising a monocyclic radical is aromatic and wherein at least one of the fused rings comprising a bicyclic or tricyclic radical is aromatic.
- R 19 is hydrogen, alkyl, or alkenyl.
- the valencies may be located on any atom of any ring of the heteroarylene group, valency rules permitting. In particular, when the point of valency is located on the nitrogen, R x is absent.
- heteroaryl includes, but is not limited to, thien-diyl, benzo[cT
- Heterogeneous transition metal hydrogenation catalyst refers to a transition metal hydrogenation catalyst which acts in a different phase than the substrate. Especially the transition metal hydrogenation catalyst is in the solid phase.
- the "support” can be merely a surface on which the metal is spread to increase the surface area.
- the supports are porous materials with a high surface area, most commonly alumina or various kinds of carbon. Further examples of supports include, but are not limited to, silicon dioxide, titanium dioxide, calcium carbonate, barium sulfate, diatomaceous earth, and clay.
- the metal itself can also act as a support, if no other support is present.
- heterogeneous transition metal hydrogenation catalyst includes but is not limited to, a Raney catalyst, Pd/C, Pd(OH) 2 /C, Pd(OAc) 2 polyurea microcapsules (NP Pd(0) EncatTM 30),Au/TiO 2 , Rh/C, Ru/Al 2 O 3 , Ir/CaCO 3 , and Pt/C, or a mixture thereof.
- NP Pd(0) EncatTM 30 is Palladium(O), microencapsulated in polyurea matrix, and is available from Sigma Aldrich as Product Number 653667.
- This catalyst is available as a 45 percent mixture of nanoparticles of palladium approximately 2 nm in size in water, typically containing 0.4 mmol/g Pd(0) (dry basis), where the unit weight includes the weight of water. See Ley, S. V. et. al. Org Lett. 2003 Nov 27;5(24):4665-8.
- the "heterogeneous transition metal hydrogenation catalyst" is not pre-treated with sulphide.
- “Strong base” refers to conjugate bases of weak acids with a pK a > 13 such as alkali metal salts of carbanion, alkoxides, amides, hydroxides, and hydrides, in particular the strong bases are lithium, sodium, potassium, rubidium, or cesium salts of carbanion, alkoxides, amides, hydroxides, and hydrides.
- strong base refers to sodium, potassium, or lithium amide or phenylithium, most particularly to butyllithium, t- butyllithium, lithium diisopropylamide, lithium bis(trimethylsilyl)amide, lithium diethylamide, potassium t-butoxide, lithium t-butoxide, sodium amide, and sodium hydride.
- the strong base is butyllithium, lithium diisopropylamide, lithium
- the strong acids include, but are not limited to: sulphuric acid (H 2 SO 4 ), hydrohalogenic acid (i.e. HX" wherein X" is I, Br, CI or F), nitric acid (HNO 3 ), phosphoric acid (H 3 PO 4 ), and combinations thereof.
- HX hydrohalogenic acid
- HNO 3 nitric acid
- phosphoric acid H 3 PO 4
- the strong acid is H 2 SO 4 or hydrohalogenic acid, wherein X" is Br or CI.
- the strong acid is HC1.
- the concentration of HC1 in water is in the range of 10% to 90%, more particularly 20% to 40%, most particularly 37 %.
- amino protecting groups refers to an acid or base labile amino protecting groups, such as Ci-C 6 alkoxycarbonyl, C 3 -C 6 cycloalkyloxycarbonyl, phenyloxycarbonyl, or
- amino protecting groups include, but are not limited to, tert-butoxycarbonyl (Boc), benzyloxycarbonyl (Cbz), -Toluenesulfonyl (Ts), and
- amino protecting groups refers to tert- butoxycarbonyl. (See Peter G. M. Wuts & Theodora W. Greene, Greene's Protective Groups in Organic Synthesis, 4 th ed. (2006)). [00026] Particularly, for the terms which definitions are given above are those specifically exemplified in the Examples.
- Yield for each of the reactions described herein is expressed as a percentage of the theoretical yield.
- any one of the process steps or sequences disclosed and/or claimed herein can be performed under an inert gas atmosphere, more particularly under argon or nitrogen.
- the methods of the present invention may be carried out as semi-continuous or continuous processes, more preferably as continuous processes.
- the present invention provides a process for preparing a compound of formula I, comprising contacting a compound of formula II a -l with a compound of formula II- 1, wherein X and R 5 are as defined above, and wherein R 10 is F, CI, Br, I, or -OSO 2 -CF 3 and the other variables are as reviously defined.
- X and R 5 in a compound of formula II a -l are each
- X is F and R 5 is I.
- the compound of formula II- 1 is the compound of formula II-2,
- R 11 is as H or a protecting group and Ring A is optionally substituted with one, two, three, or four groups selected from R 6 , R 7 , R 8 , and R 9 , each of which are independently selected from halo, halo(CrC 8 )alkyl, (Ci-C6)alkoxy, and halo(Ci-C 6 )alkoxy.
- Ring A is phenyl or pyridyl. More particularly, Ring A is phenyl substituted with R 12a and R 12b which are each independently F, CI, Br, I, alkyl, haloalkyl, alkoxy, or haloalkoxy.
- the compound of formula II- 1 is the compound of formula II-3,
- R 11 is as defined previously and R 10 is F, CI, Br, I, or OSO 2 CF 3 , and R 12a and R 12b are each independently F, CI, Br, I, alkyl, haloalkyl, alkoxy, or haloalkoxy.
- R 10 is F, CI, Br, or I
- R 12a and R 12b are each independently F, CI, Br, I, alkyl, haloalkyl, alkoxy, or haloalkoxy.
- R 10 is F and R 12a and R 12b are each independently F, CI, I, alkyl, or alkoxy.
- R 10 is F and R 12 and R 12b are each independently F, CI, I, or alkyl.
- the present invention provides a process for preparing a compound of formula P, comprising contacting a compound of formula II a with a compound of formula II, the synthesis of which is described below.
- the present invention provides a process for preparing a compound of formula ⁇ , comprising contacting a compound of formula II a with a compound of formula II in the presence of a strong base.
- the strong base is selected from the group consisting of butyllithium, t-butyllithium, the lithium, sodium, or potassium salts of mono or bis substituted alkyl or aromatic amines, and silylalkyl or
- the strong base is selected from the group consisting of the lithium, sodium, or potassium salts of diisopropyl amine,
- the strong base is selected from the group consisting of the lithium, sodium, and potassium salts of bis(trimethylsilyl)amine.
- the strong base is selected from the group consisting of lithium diisopropylamide, lithium bis(trimethylsilyl)amide, and lithium diethylamide. More particularly, the base is lithium bis(trimethylsilyl)amide.
- the strong base can be obtained commercially or generated in situ using conventional methods.
- the reaction of a compound of formula II with a compound of formula II a is typically performed in the presence of a solvent.
- the solvent is selected from the group consisting of a an ether-like solvent (e.g., tetrahydrofuran, diisopropyl ether, t-butylmethyl ether, dibutyl ether, dimethyl acetal, dioxane, or 2-methyl tetrahydrofuran (2-MeTHF)); an aromatic solvent (e.g., toluene or t-butyl-benzene), an aliphatic hydrocarbon solvent (e.g., hexanes, heptanes, or pentane); a saturated alicyclic hydrocarbon solvent (e.g., cyclohexane or cyclopentane); and a polar aprotic solvent (e.g., dimethylformamide or dimethyl sulfoxide), or a mixture thereof.
- a ether-like solvent
- Preferred solvents include toluene and tetrahydrofuran.
- the solvent is tetrahydrofuran.
- the compound of formula II a is generally commercially available or is readily prepared using methods well known to the person skilled in the art.
- the compound of formula II a is available from Sigma Aldrich as 2-fluoro-4-iodo-aniline (CAS Registry Number (CASRN) 29632-74-4).
- a strong base such as lithium bis(trimethylsilyl) amide (LiHMDS) is added to mixture of a compound of formula II- 1 such as a compound of formula II and 2-fluoro-4-iodo aniline in a suitable ether-like solvent such as THF.
- the reaction mixture is typically quenched with aqueous acid, typically aqueous sulphuric acid or hydrochloric acid, and then worked-up according to conventional methods to provide a compound of formula I such as a compound of formula ⁇ .
- the present invention provides a process for preparing a compound of
- the deprotection is accomplished in a suitable solvent using H 2 in the presence of a heterogeneous hydrogenation transition metal catalyst, or by treatment with chloroethyl chloroformate in the presence of MeCN or Na/NH 3 .
- the deprotection occurs by catalytic hydrogenolysis in the presence of a mineral acid such as HC1 or an organic acid such as acetic acid or a mixture thereof, which accelerates the reaction.
- the deprotection is accomplished via hydrogenolysis in the presence of a suitable solvent and in the presence of an acid such as hydrochloric acid or acetic acid or a mixture thereof.
- the deprotection is accomplished in the presence of HCI and acetic acid.
- the heterogeneous hydrogenation transition metal catalyst can be any such catalyst known in the art.
- the catalyst is typically a heterogeneous transition metal catalyst which is typically selected from the group consisting of a Raney catalyst, Pd/C, Pd(OH) 2 /C, Pd(OAc) 2 polyurea microcapsules (NP Pd(0) EncatTM 30), Au/TiO 2 , Rh/C, Ru/Al 2 O 3, Ir/CaCO 3 , and Pt/C, or a mixture thereof.
- NP Pd(0) EncatTM 30 is Palladium(O), microencapsulated in polyurea matrix, and is available from Sigma Aldrich as Product Number 653667.
- the hydrogenation catalyst is selected from the group consisting of a Raney catalyst, Pd/C, Pd(OH) 2 /C, Au/TiO 2 , Rh/C, Ru/Al 2 O 3 , Ir/CaCO 3 , and Pt/C, or a mixture thereof. More particularly, the hydrogenation catalyst is Pd/C, Pd(OH) 2 /C, Au/TiO 2 , Rh/C, Ra-Ni, or Pt/C. Most particularly, the hydrogenation catalyst is Pd C or Ra-Ni.
- Palladium is used in catalytic amounts, e.g. 0.001 to 0.1 equivalents, preferably 0.01 to 0.1 equivalents, with respect to the compound of formula III.
- the catalyst loading for the catalytic hydrogenolysis is typically 0.1 to 20 weight percent. More typically, the catalyst loading for the catalytic hydrogenolysis is typically 5 to 15 weight percent.
- the catalytic hydrogenolysis may be performed in the presence of a suitable solvent.
- suitable solvents include alcohols (e.g. methanol or ethanol), ethers (e.g.
- ester e.g. ethyl acetate
- aromatic hydrocarbons e.g. toluene or t-butyl-benzene
- aliphatic hydrocarbons e.g. hexanes, heptanes, or pentane
- saturated alicyclic hydrocarbons e.g. cyclohexane or cyclopentane
- aprotic polar solvents e.g.
- the solvent is toluene, ethyl acetate or tetrahydrofuran, or a mixture thereof, optionally in the presence of water.
- the solvent is a mixture of tetrahydrofuran and ethyl acetate.
- the solvent is toluene.
- the catalytic hydrogenolysis is typically performed at a temperature between 0 and 50 °C. More typically, the deprotection is performed at a temperature between 10 and 40 °C. In a particular embodiment, the temperature is between 15 and 25 °C.
- the H 2 is added at a pressure of at least 0.1 bar, and more preferably at a pressure between 0.1 to 100 bar. More particularly, the H 2 is added at a pressure between 0.2 bar to 30 bar, and more particularly, the H 2 is added at a pressure of 1 to 10 bar. In a preferred embodiment, the 3 ⁇ 4 is added at a pressure of approximately 2 bar.
- the present invention provides a process for preparing a compound of formula III, comprising contacting a compound of formula IV with a compound of formula IV a .
- the compound of formula IV a (CASRN 157373-08-5) is generally available from commercial sources or is readily prepared by a skilled artisan.
- the compound of formula r a can be prepared from the corresponding carboxylic acid (CASRN 61079-72-9) using thionyl chloride or oxalyl chloride or the like in the presence of a catalyst such as pyridine, dimethylformamide, triethyl amine, or diisopropylethyl amine.
- the present invention provides a process for preparing a compound of formula III, comprising contacting a compound of formula IV with a compound of formula IV a in the presence of a base.
- the base is an inorganic base, which is preferably an alkali or alkali earth metal hydroxide, phosphate, or carbonate. More particularly, the inorganic base is selected from the group consisting of LiOH, NaOH, KOH, CsOH, NH 4 OH, RbOH, Mg(OH) 2 , Ca(OH) 2 , Ba(OH) 2 , Li 2 CO 3 , Na 2 CO 3 , K 2 CO 3 , Cs 2 CO 3 , (NH4) 2 CO 3 , and
- the base is K 3 PO 4 , 2 CO 3 , or KOH. In a more particular embodiment, the base is K 3 PO 4 , K 2 CO 3 , or KOH.
- the base is typically used as a mixture in water.
- the reaction is accomplished in a suitable solvent in the presence of the base.
- the solvent is selected from the group consisting of an ether (e.g. tetrahydrofuran, diisopropyl ether, t-butylmethyl ether, dibutyl ether, dimethyl acetal, or dioxane, 2-MeTHF); an alcohol such as methanol or ethanol or the like; toluene; or a mixture thereof.
- the solvent is toluene.
- the solvent is a mixture of tetrahydrofuran and water. The reaction is typically performed at a temperature of approximately 10 to 20 °C.
- the present invention provides a process for preparing a compound of formula rv a , comprising reacting a compound of formula IV b with oxalyl chloride, thionyl chloride, or the like, in the presence of a catalyst such as pyridine, dimethylformamide, triethyl amine, or diisopropyl
- the conversion of compound IV b to rv a is carried out in the presence of pyridine or dimethylformamide, particularly in the presence of trace amount of pyridine, more particularly wherein between about 0.001 and 0.02 eq of pyridine is being used, most particularly wherein about 0.005 eq of pyridine is being used.
- the present invention provides a process for preparing a compound of
- PG is an amino protecting group.
- the amino protecting group is an FMoc, CBz, or BOC protecting group.
- the amino protecting group is a BOC protecting group.
- the deprotection of a compound of formula V may be performed in the presence of a solvent, such as an alcohol (e.g. methanol or ethanol), an ether-like solvent (e.g.
- ester-like solvent e.g. ethyl acetate
- aromatic solvent e.g. toluene or t-butyl- benzene
- an aliphatic hydrocarbon solvent e.g. hexanes, heptanes, or pentane
- a saturated alicyclic hydrocarbon solvent e.g. cyclohexane or cyclopentane
- an aprotic polar solvents e.g.
- dimethylformamide dimethyl sulfoxide
- a mineral or organic co-catalyst preferably in the presence of methanol, ethanol, isopropanol, tert-butanol, tetrahydrofuran, 2- methyltetrahydrofuran, toluene, or dimethylformamide and hydrochloric acid or acetic acid.
- the deprotection is carried out in a solvent in the presence of a strong mineral or organic acid, particularly trifluoroacetic acid, methansulfonic acid, p-toleunensulfonic acid, Lewis acids, particularly trialkylsilyl iodides, trimethylsilyl halides, boron trifuoride diethyl etherate, zinc halides, tin halides, or an inorganic acid. More particularly the acid is sulfuric acid, HBr, or HC1. Common conditions include HCl/dioxane, trifluoroacetic acid/methylene chloride.
- the deprotection is carried out in a heterogeneous mixture containing aqueous HC1 and toluene.
- the present invention provides a process for preparing a compound of formula V wherein PG is an amino protecting group, comprising reducing a compound of
- the reaction occurs in the presence of a reducing agent.
- the reducing agent can be selected from the group consisting of borohydrides.
- the reducing agent is selected from the group consisting of NaBHU, NaBH(OAc)3, and NaBH 3 CN. More preferably, the reducing agent is NaBH 3 CN or NaBIL; and LiCN, NaCN, or KCN under conditions used in typical reductive amination procedures.
- a typical reductive animation procedure involves combining an amine and a carbonyl compound in the presence of a complex metal hydride such as NaBFLj, L1BH 4 , NaBHaCN, Zn(BH 4 ) 2 , sodium triacetoxyborohydride, or borane/pyridine under mild acidic conditions, conveniently at a pH of 1-5, which promotes formation of the intermediate iminium salt which is then reduced by the metal hydride.
- a complex metal hydride such as NaBFLj, L1BH 4 , NaBHaCN, Zn(BH 4 ) 2 , sodium triacetoxyborohydride, or borane/pyridine
- the reducing agent is NaBH 3 CN.
- the preparation of a compound of formula V may be performed in the presence of a solvent, such as an alcohol solvent (e.g. methanol or ethanol), an ether-like solvent (e.g.
- ester-like solvent e.g. ethyl acetate
- aromatic solvent e.g. toluene or t-butyl- benzene
- an aliphatic hydrocarbon solvent e.g. hexanes, heptanes, or pentane
- a saturated alicyclic hydrocarbon solvent e.g. cyclohexane or cyclopentane
- an aprotic polar solvents e.g.
- dimethylformamide dimethyl sulfoxide
- a mineral or organic co-catalyst preferably in the presence of methanol, ethanol, isopropanol, tert-butanol, tetrahydrofuran, 2- methyltetrahydrofuran, toluene, or dimethylformamide.
- the present invention provides a process for preparing a compound of formula VI comprising reacting a compound of formula VII (CASR 106565-71- 3) with a compound of formula VII
- PG is an amino protecting group such as Fmoc, Cbz, or Boc or the like.
- the compound of formula VII a is generally available from commercial sources or is readily prepared using methods well known to the person skilled in the art. (See, for example, Rice, K. et al. Med. Chem. Lett. 2012, 3, 416, and Podlech, J. and Seebach, D. Helv. Chim. Acta 1995, 1238.)
- the compound of formula VII a wherein PG is Boc is commercially available from Sigma Aldrich as 1-Boc-azetidinone (tert-butyl 3-oxo-l-azetidinecarboxylate, CASRN 398489- 26-4).
- the compound of formula VII is generally available from commercial sources or is readily prepared using methods well known to the person skilled in the art. (See, for example, N. R. Guz et al, Org. Proc. Res. Develop. 2010 14(6): 1476).
- the compound of formula VII is commercially available, from Sigma Aldrich, as (3S,5R,8aS)-3- phenyl-hexahydro-oxazolo[3,2-a]pyridine-carbonitrile (CAS Reg. No. 106565-71-3).
- the reaction is accomplished in a suitable solvent in the presence of a base.
- the solvent is a polar aprotic solvent selected from ethers such as tetrahydrofuran, diisopropyl ether, /-butylmethyl ether, dibutyl ether, dimethyl acetal, dioxane, or 2-MeTHF or mixtures thereof, used alone or in combination with a polar aprotic solvent such as l,3-Dimethyl-3,4,5,6-tetrahydro-2(lH)-pyrimidinone (DMPU).
- DMPU l,3-Dimethyl-3,4,5,6-tetrahydro-2(lH)-pyrimidinone
- the solvent is THF used in combination with DMPU.
- the base is an amine base such as the lithium, sodium, or potassium salts of mono or bis substituted alkyl or aromatic amines, and silylalkyl or silylaromatic amines.
- the strong base is selected from the group consisting of the lithium, sodium, or potassium salts of diisopropyl amine,
- the strong base is selected from the group consisting of the lithium, sodium, and potassium salts of bis(trimethylsilyl)amine. More particularly, the strong base is selected from the group consisting of lithium diisopropylamide, lithium bis(trimethylsilyl)amide, and lithium diethylamide. More particularly, the base is lithium diisopropylamide.
- the reaction is typically performed at low temperature.
- the reaction temperature is about 0 to -80 °C.
- the reaction temperature is about -20 to -80 °C.
- the reaction temperature is about -50 to - 80 °C.
- the reaction temperature is about -70 to -80 °C.
- the present invention provides a process for preparing a compound of formula V, comprising the following steps:
- steps 1 to 2 steps can be telescoped.
- the present invention provides a process for the preparation of the compound of formula IV, which comprises the following steps:
- any combination of steps 1 to 3 or all steps can be telescoped. More particularly steps 2 and 3 are telescoped.
- the present invention provides a process for the preparation of the compound of formula III, which comprises the following steps: 1) reacting a compound of formula VII with a compound of formula VII a as previously described to provide a compound of formula VI;
- any combination of steps 1 to 4 or all steps can be telescoped. More particularly steps 2 to 4 are telescoped.
- the present invention provides a process for the preparation of the compound of formula II, which comprises the following steps:
- steps 1 to 5 Any combination of steps 1 to 5 or all steps can be telescoped. More particularly steps 2 to 5 are telescoped.
- the present invention provides a process for the preparation of a compound of formula F, which comprises the following steps:
- steps 1 to 6 or all steps can be telescoped. More particularly, steps 2 to 5 are telescoped.
- the present invention provides a process for the preparation of the compound of formula ⁇ , which comprises the following steps:
- steps (a) and (b) can be telescoped.
- the present invention provides a process for the preparation of the compound of formula ⁇ , which comprises the following steps:
- any combination of steps (a) to (c) or all steps can be telescoped. More particularly steps (a) and (b) are telescoped.
- the present invention provides a process for the preparation of the compound of formula ⁇ , which comprises the following steps:
- any combination of steps a) to d) or all steps can be telescoped. More particularly steps (a) and (c) are telescoped.
- the present invention provides a process for the preparation of the compound of formula ⁇ , which comprises the following steps:
- IVa IV III d hydro enation of a compound of formula III, as previousl described;
- any combination of steps (a) to (e) or all steps can be telescoped. More particularly steps (a) to (d) are telescoped.
- the present invention provides a process for the preparation of a compound of formula I obtained by any of the processes and conditions mentioned previously.
- a further aspect of the present invention provides a compound of formula VI;
- PG is an amino protecting group.
- PG is tert-butyloxycarbonyl (Boc).
- PG is an amino protecting group.
- PG is tert-butyloxycarbonyl (Boc).
- a further aspect of the pre ides a compound of formula IV.
- the present invention also includes the following additional embodiments.
- Embodiment 1 A rocess for making a compound of formula I:
- A is arylene or heteroarylene optionally substituted with one, two, three, or four groups selected from R 6 , R 7 , R 8 , and R 9 , each of which are independently selected from hydrogen, halo, (Ci-Cg)alkyl, halo(Ci-C8)alkyl, hydroxy, (Ci-C6)alkoxy, and halo(Ci-C6)alkoxy;
- X is alkyl, halo, halo(C 1 -Cg)alkyl, or halo(C C 6 )alkoxy;
- R 1 , R 2 , R 3 , and R 4 are each independently hydrogen, (Ci-C8)alkyl, or halo(Ci-C8)alkyl;
- R 5 is hydrogen, halo, or (Ci-Cg)alkyl;
- Embodiment 2 The process of any one of embodiments 1 or 2, wherein X and R 5 in a compound of formula II a -l are each independently F, CI, Br, or I.
- Embodiment 3 The process of any one of embodiments 1 to 3, wherein X is F and R 5 is I.
- Embodiment 4 The process of any one of embodiments 1 to 3 wherein the compound of formula II- 1 is the compound of formula II-2,
- R is H or protecting group and Ring A is optionally substituted with one, two, three or four groups selected from R , R , R , and R , each of which are independently selected from halo, (Ci-C 8 )alkyl, halo(C 1 -C 8 )alkyl, (Ci-C 6 )alkoxy, and halo(CrC 6 )alkoxy.
- Embodiment 5 The process of any one of embodiments 1 to 4, wherein the compound of formula II- 1 is the compound of formula II-3,
- R 11 is as defined previously;
- R 10 is F, CI, Br, I, or OSO 2 CF 3 ; and
- R 12a and R 12b are each independently F, CI, Br, I, alkyl, haloalkyl, alkoxy, or haloalkoxy.
- Embodiment 6 The process of embodiment 5, wherein R 10 in the compound of formula II-3 is F, CI, Br, or I, and R 12a and R 12b are each independently F, CI, Br, alkyl, haloalkyl, alkoxy, or haloalkoxy.
- Embodiment 7 The process of any one of embodiments 1 to 6, wherein R 10 in the compound of formula II-3 is F and R 12a and R 12b are each independently F, CI, alkyl, or alkoxy.
- Embodiment 8 The process of any of embodiments 1-7 wherein the strong base is selected from the group consisting of butyllithium, t-butyllithium, the lithium, sodium, or potassium salts of mono or bis- substituted alkyl or aromatic amines, and silylalkyl or silylaromatic amines.
- Embodiment 9. The process of any of embodiments 1-8, wherein the strong base is selected from the group consisting of the lithium, sodium, or potassium salts of diisopropyl amine, bis(trimethylsilyl)amine, diethylamine, and dimethylamine.
- Embodiment 10 The process of any one of embodiments 1 to 9, wherein the strong base is lithium bis(trimethylsilyl)amide.
- Embodiment 11 The process of any one of embodiments 1 to 10, wherein reaction is performed in the presence of a solvent which is tetrahydrofuran.
- Embodiment 12 The process of any of embodiments 1 to 11, wherein the compound of formula II a -l is a compound of formula II a ; the compound of formula II- 1 is a
- Embodiment 13 A process for preparing a compound of formula II,
- deprotection comprises hydrogenation using H 2 in the presence of a heterogeneous transition metal hydrogenation catalyst or treatment with chloroethyl chloroformate in the presence of MeCN or Na/NH 3 .
- Embodiment 14 The process of embodiment 13, wherein the heterogeneous transition metal hydrogenation catalyst is selected from the group consisting of a Raney catalyst, Pd/C, Pd(OH) 2 /C, Pd(OAc) 2 , Au/TiO 2 , Rh/C, Ru/Al 2 O 3 , Ir/CaCO 3 , Pt/C, and Palladium(O) microencapsulated in polyurea matrix as a 45 percent mixture of nanoparticles of palladium approximately 2 nm in size in water, containing 0.4 mmol/g Pd(0) (dry basis), where the unit weight includes the weight of water (NP Pd(0) EncatTM 30), or a mixture thereof.
- a Raney catalyst Pd/C, Pd(OH) 2 /C, Pd(OAc) 2 , Au/TiO 2 , Rh/C, Ru/Al 2 O 3 , Ir/CaCO 3 , Pt/C, and Palladium(O) microencapsulated
- Embodiment 15 The process of embodiment 14, wherein the heterogeneous transition metal hydrogenation catalyst is Pd/C.
- Embodiment 16 A process for preparing a compound of formula III, comp
- Embodiment 17 The process of embodiment 16 in the presence of an inorganic base which is an alkali or alkali earth metal hydroxide, phosphate, or carbonate.
- an inorganic base which is an alkali or alkali earth metal hydroxide, phosphate, or carbonate.
- Embodiment 18 The process of any one of embodiments embodiment 16 to 17, wherein the inorganic base is selected from the group consisting of LiOH, NaOH, KOH, CsOH, NH 4 OH, RbOH, Mg(OH) 2 , Ca(OH) 2 , Ba(OH) 2 , Li 2 CO 3 , Na 2 CO 3 , K 2 CO 3 , Cs 2 CO 3 ,
- Embodiment 19 The process of any one of embodiments 16 to 18, wherein the inorganic base is K 3 PO 4 , K 2 CO 3 , or KOH.
- Embodiment 20 A process for preparing a compound of formula IV, comprising dep
- Embodiment 21 The process of embodiment 20, wherein the protecting group is a BOC protecting group.
- Embodiment 22 A process for preparing a compound of formula V wherein PG is an amino protecting group, comprising reducing a compound of formula VI with a reducing agent select from the group consisting of boroh drides.
- Embodiment 23 A process for preparing a compound of formula VI comprising reacting a compound of formula VII with a compound of formula VII a in the presence of base wherein PG is an amino rotecting group.
- Embodiment 24 A process for the preparation of the compound of formula
- Embodiment 25 A process for the preparation of the compound of formula P which comprises contacting a compound of formula II and compound of formula II a in the pre
- Embodiment 26 The process of embodiment 25, further comprising the step of hydrogenation of a compound of formula III to provide a compound of formula II.
- Embodiment 27 The process of embodiment 26, further comprising the step of reacting a compound of formula IV with a compound of formula IV a to provide a compound of formula III.
- Embodiment 28 The process of embodiment 27, further comprising the step of deprotecting the azetidinyl ring of a compound of formula V.
- Embodiment 29 The process of embodiment 28, further comprising reducing a compound of formula VI with a reducing agent selected from the group consisting of borohydrides to provide a compound of formula V.
- Embodiment 30 The process of embodiment 29, further comprising reacting a compound of formula VII with a compound of formula VII a in the presence of base.
- Embodiment 31 A compound which is:
- Embodiment 32 The compound of embodiment 31 , wherein PG in the compound of formulas VI and V is BOC. Synthesis
- Compounds of this invention can be made by the synthetic procedures described below.
- the starting materials and reagents used in preparing these compounds are either available from commercial suppliers such as Sigma Aldrich Chemical Co. (Miivvaukee, Wis.), or Bachem (Torrance, Calif.), or are prepared by methods known to those skilled in the an following procedures set forth in references such as Fieser and Fieser s Reagents for Organic Synthesis, Volumes 1- 17 (John Wiley and Sons, 1991); Rodd's Chemistry of Carbon
- the compounds disclosed and claimed herein have asymmetric carbon atoms or cyuaiernized nitrogen atoms in their structure and may be prepared through the through syntheses described herein as single stereoisomers, racemaies, and as mixtures of enantiomers and diasiereomers.
- the compounds may also exist as geometric isomers. Ail such single
- Some of the compounds of the invention may exist as tautomers.
- the molecule may exist in the enol form; where an amide is present, the molecule may exist as the imidic acid; and where an enamine is present, the molecule may exist as an imine. All such tautomers are within the scope of the invention.
- optically active (R)- and (S)- isomers may be prepared using chiral synthons or chiral reagents, or resolved using conventional techniques.
- Enantiomers may be resolved by methods known to one of ordinary skill in the art, for example by: formation of diastereomeric salts or complexes which may be separated, for example, by crystallization; via formation of diastereomeric derivatives which may be separated, for example, by crystallization; selective reaction of one enantiomer with an enantiomer-specific reagent, for example enzymatic oxidation or reduction, followed by separation of the modified and unmodified enantiomers; or gas-liquid or liquid chromatography in a chiral environment, for example on a chiral support, such as silica with a bound chiral ligand or in the presence of a chiral solvent.
- enantiomers may be synthesized by asymmetric synthesis using optically active reagents, substrates, catalysts or solvents or by converting on enantiomer to the other by asymmetric transformation.
- the major component enantiomer may be further enriched (with concomitant loss in yield) by recrystallization.
- the compounds of the present invention can exist in unsolvated as well as solvated forms with pharmaceutically acceptable solvents such as water, ethanol, and the like.
- pharmaceutically acceptable solvents such as water, ethanol, and the like.
- the solvated forms are considered equivalent to the unsolvated forms for the purposes of the present invention.
- the methods of the present invention may be carried out as semi-continuous or continuous processes, more preferably as continuous processes.
- the present invention as described above unless indicated otherwise may be carried out in the presence of a solvent or a mixture of two or more solvents.
- the solvent is an aqueous or an organic solvent such as the ether-like solvent (e.g. tetrahydrofuran,
- aliphatic hydrocarbon solvent e.g. hexane, heptane or pentane
- saturated alicyclic hydrocarbon solvent e.g. cyclohexane or cyclopentane
- aromatic solvent e.g. toluene, o- m- or p-xylene or t- butyl-benzene
- CDCI3 ⁇ 7.30 - 7.50 (m, 5 H), 4.17 - 4.27 (m, 3 H), 3.94 - 4.01 (m, 2 H), 4.11 - 4.1 (m, 2 H), 4.09 (d, 1 H), 3.95 (d, 1 H), 3.87 (dd, 1 H), 3.76 (dd, 1 H), 3.54 - 3.70 (br, 1 H), 2.85 - 3.03 (br, 1 H), 2.18 - 2.25 (m, 1 H), 2.12 (br, 1 H), 1.97 - 2.04 (m, 1 H), 1.85 - 1.94 (m, 1 H), 1.61 - 1.79 (m, 3 H), 1.41 (s, 9 H).
- MS (EI): m/z 400.48 ([M+H] + , 100%).
- the resulting mixture was subsequently stirred for another 3 h at 70 to 75 °C. After complete reaction, the mixture was cooled to 23 °C and slowly dosed within 30 min into a mixture of toluene (100 mL) and aqueous NaOH (60g, 10%-w/w) and stirred for 15 min. The reaction flask was rinsed with the quenched mixture. The layers were separated, and the organic phase was washed with toluene (30 mL). The combined organic phases were
- the product solution was fully concentrated in the rotary evaporator, treated with EtOH and again fully concentrated resulting in 19.2 g of a foamy product.
- the residue was dissolved in a mixture of ethyl acetate (30 mL) and MeOH (15mL) and purified by flash chromatography over 120 g silica gel using ethyl acetate as eluent.
- Toluene (360 mL) was partially removed by distillation under vacuum (jacket temperature: 60 to 70 °C, pressure: 200 to 100 mbar). The solution was cooled to room temperature, resulting in 636 g of a yellowish and slightly turbid solution that was stored under N 2 atmosphere and used in the subsequent step without any further treatment. HPLC purity: 99.2%-area.
- the product solution (90 mL) was filtered and the filter residue was washed with EtOH (15 ml).
- EtOH 15 ml
- the solution was completely concentrated, and the residue was taken up in MTBE (40 mL), subsequently again fully concentrated, then taken up in a mixture of ethyl acetate (29 mL) and heptane (40 mL), then fully concentrated, then again taken up in a mixture of MTBE (20 mL) and heptane (50 mL) and again fully concentrated resulting, finally, in a foamy solid (32.5 g).
- the mixture was treated with EtOH (13 mL), Acetic acid (4.15 mL, 72 mmol, 2.5 eq.) and with aqueous hydrochloric acid (2.5 ml, 37%-w/w, 30 mmol, 1.0 eq.).
- the autoclave was rendered inert, pressurized with 2 bar of 3 ⁇ 4, and the reaction was run at 2 bar 3 ⁇ 4 pressure at 25 °C for 12 h. The pressure was released from the autoclave, and the suspension was treated with MeOH (25 mL) and kept stirring for 30 min and filtered under argon protection over filter paper. The autoclave and the filter residue were rinsed with MeOH (4 mL).
- the combined filtrates were evaporated under reduced pressure to approximately 20-30 percent of the initial volume.
- the residue was treated with isopropanol (38.5 mL) at 30 to 35 °C, stirred for 1 h, cooled to 20 to 25 °C, and treated with water (0.58 g) and with aqueous hydrochloric acid (2.5 mL, 37%-ww, 30 mmol, 1.0 eq.).
- the resulting suspension was concentrated under vacuum at 25 to 35 °C until a volume of approximately 22 mL was reached, and MTBE (31 mL) was added at 25 to 35 °C.
- the final suspension was cooled to 5 to 10 °C, stirred for 1 h, and then filtered.
Abstract
Description
Claims
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EP13780303.7A EP2909188B1 (en) | 2012-10-12 | 2013-10-14 | Novel process for making compounds for use in the treatment of cancer |
PE2019002024A PE20191818A1 (en) | 2012-10-12 | 2013-10-14 | PROCESS FOR THE PREPARATION OF 1 - ({3,4-DIFLUORO-2 - [(2-FLUORO-4-IODOPHENYL) AMINO] PHENYL} CARBONYL) -3 - [(2S) -PIPERIDIN-2-IL] AZETIDIN-3OL |
SI201331045T SI2909188T1 (en) | 2012-10-12 | 2013-10-14 | Novel process for making compounds for use in the treatment of cancer |
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