WO2013013503A1 - 2,3-dihydroimidazo[1,2-c] pyrimidin-5(1h)-one compounds use as lp-pla2 inhibitors - Google Patents

2,3-dihydroimidazo[1,2-c] pyrimidin-5(1h)-one compounds use as lp-pla2 inhibitors Download PDF

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WO2013013503A1
WO2013013503A1 PCT/CN2012/000999 CN2012000999W WO2013013503A1 WO 2013013503 A1 WO2013013503 A1 WO 2013013503A1 CN 2012000999 W CN2012000999 W CN 2012000999W WO 2013013503 A1 WO2013013503 A1 WO 2013013503A1
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prepared
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PCT/CN2012/000999
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French (fr)
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Zehong Wan
Kai Long
Yingxia SANG
Xiaobo SU
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Glaxo Group Limited
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Priority to AU2012289492A priority Critical patent/AU2012289492B2/en
Priority to EP12818124.5A priority patent/EP2739627A4/en
Priority to RU2014107484/04A priority patent/RU2014107484A/en
Priority to CA2842965A priority patent/CA2842965A1/en
Priority to US14/234,680 priority patent/US8975400B2/en
Priority to BR112014001665A priority patent/BR112014001665A2/en
Priority to JP2014521913A priority patent/JP2014521611A/en
Priority to KR1020147004711A priority patent/KR20140059203A/en
Priority to CN201280040402.3A priority patent/CN103827116B/en
Publication of WO2013013503A1 publication Critical patent/WO2013013503A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D487/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
    • C07D487/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
    • C07D487/04Ortho-condensed systems
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/28Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P9/00Drugs for disorders of the cardiovascular system
    • A61P9/10Drugs for disorders of the cardiovascular system for treating ischaemic or atherosclerotic diseases, e.g. antianginal drugs, coronary vasodilators, drugs for myocardial infarction, retinopathy, cerebrovascula insufficiency, renal arteriosclerosis

Definitions

  • the present invention relates to novel [5, 6] bicyclic pyrimidone compounds, processes for their preparation, intermediates useful in their preparation, pharmaceutical compositions containing them, and their use in therapy for the treatment of diseases or conditions mediated by Lp-PLA 2 .
  • Lipoprotein-associated phospholipase A 2 (Lp-PLA 2 ) previously known as platelet- activating factor acetylhydrolase (PAF-AH), is a phospholipase A2 enzyme involved in hydrolysis of lipoprotein lipids or phospholipids.
  • Lp-PLA 2 travels with low-density lipoprotein (LDL) and rapidly cleaves oxidized phosphatidylcholine molecules derived from the oxidation of LDL. (See e.g. , Zalewski A, et al., Arterioscler. Thromb. Vase. Biol, 25, 5, 923-31(2005)).
  • Lp-PLA 2 hydrolyzes the sn-2 ester of the oxidized phosphatidylcholines to give lipid mediators, lyso- phosphatidylcholine (lysoPC) and oxidized nonesterified fatty acids (NEFAs). It has been observed that lysoPC and NEFAs elicit inflammatory responses. (See e.g., Zalewski A, et al.
  • Lp-PLA 2 inhibitors and/or uses thereof have been previously described. (See. for example, published patent application nos. W096/13484, W096/19451 , WO97/02242, W097/12963, W097/21675, W097/21676, WO 97/41098, WO97/41099, WO99/24420,
  • Disclosed uses include treating disease that involves or is associated with endothelial dysfunction, disease that involves lipid oxidation in conjunction with Lp-PLA 2 activity (e.g., associated with the formation of lysophosphatidylcholine and oxidized free fatty acids), and disease that involves activated monocytes, macrophages or lymphocytes or which is associated with increased involvement of monocytes, macrophages or lymphocytes.
  • diseases or conditions include atherosclerosis (e.g.
  • peripheral vascular atherosclerosis and cerebrovascular atherosclerosis diabetes, hypertension, angina pectoris, after ischaemia and reperfusion, rheumatoid arthritis, stroke, inflammatory conditions of the brain such as Alzheimer's Disease, various neuropsychiatric disorders such as schizophrenia, myocardial infarction, ischaemia, reperfusion injury, sepsis, acute and chronic inflammation, and psoriasis.
  • Lp-PLA 2 inhibitors and/or uses thereof are also reported, for example, in PCT Publication Nos. WO05/0031 18 (and its Canadian family member CA 2530816A1); WO06/063811 ;
  • Lp-PLA 2 Lp-PLA 2
  • inhibitors thereof Other researchers have studied the effects related to Lp-PLA 2 and inhibitors thereof. For example, research data has also indicated that LysoPC promotes atherosclerotic plaque development, which can ultimately lead to the formation of a necrotic core. (See e.g., Wilensky et al., Current Opinion in Lipidology, 20, 415-420 (2009)). In addition, the effect of Lp-PLA 2 inhibitors on atherosclerotic plaque composition was demonstrated in a diabetic and
  • AD Alzheimer's disease
  • oxidized LDL has also been observed in AD patients (See e.g., Kassner et al. Current Alzheimer Research, 5, 358-366 (2008); Dildar, et al., Alzheimer Dis Assoc Disord, 24, April-June ( 2010); Sinem, et al. Current Alzheimer Research, 7, 463-469
  • Lp-PLA 2 inhibitors for treating diseases associated with blood-brain-barrier leakage, including, e.g., Alzheimer's disease and vascular dementia.
  • Lp-PLA 2 inhibitors can reduce inflammation, for example, reducing multiple cytokine release by suppressing lysoPC production. (See e.g., Shi, et al. Atherosclerosis 191, 54—62 (2007)). Thus, inhibiting Lp-PLA 2 is a potential therapeutic treatment for
  • neurodegenerative diseases including multiple sclerosis, amyotrophic lateral sclerosis, Parkinson's disease, etc.
  • Lp-PLA 2 inhibitors can be used to treat tissue damage associated with diabetes by reducing the production of lysoPC, which can cause a continuous cycle of vascular inflammation and increased reactive oxygen species (ROS) production.
  • ROS reactive oxygen species
  • Glaucoma and age-related macular degeneration are retina neurodegenerative diseases.
  • inflammation including TNF-alpha signaling, may play an important role in the pathogenesis of glaucoma and AMD (See e.g., Buschini et al., Progress in Neurobiology, 95, 14-25 (2011 ); Tezel, Progress in Brain Research, vol. 173, ISSN0079-6123, Chapter 28).
  • Lp-PLA 2 inhibitors have function of blocking inflammatory cytokine release (See e.g., Shi, et al. Atherosclerosis, 191 , 54—62 (2007)), it is believed that Lp-PLA 2 inhibitors can provide a potential therapeutic application for both glaucoma and AMD.
  • Lp-PLA 2 In view of the number of pathological responses that are mediated by Lp-PLA 2 , attempts have been made to prepare compounds that inhibit its activity. Though a number of such compounds have been disclosed in the art, there remains a continuing need for inhibitors of Lp- PLA 2 which can be used in the treatment of a variety of conditions.
  • this invention relates to compounds of Formula (I) and pharmaceutically acceptable salts thereof,
  • R is H or d-C 6 aIkyl
  • R' is H, halo, or C C 6 alkyl
  • X is -0-, -NH-, -N(C r C 6 alkyl)-, -S- or -CH 2 -,
  • n 0, 1 , 2 or 3, and when X is -CH 2 -, n is 1 or 2,
  • Ar is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH 2 , -NHRj, -NRiR 2 , C]-C 6 alkyl, Q- C 6 alkoxy, and Ci-C 6 haloalkyl, and
  • Y is absent or -OAr ⁇ -NH-Ar', -N(C C 6 alkyl)-Ar', or -(CH 2 )-Ar',
  • Ar' is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH 2 , -NHRi, -NR]R 2 , C C 6 alkyl, Ci-C 6 alkoxy, and CrQhaloalkyl, and
  • each occurrence of Rj and R 2 are independently Ci-Ce lkyl.
  • This invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a compound of present invention and one or more pharmaceutically acceptable excipients.
  • the invention also relates to methods of treating a disease associated with the activity of Lp-PLA 2 , which comprises administering to a subject in need thereof with an effective amount of a compound of present invention.
  • the disease may be associated with the increased involvement of monocytes, macrophages or lymphocytes; with the formation of lysophosphatidylcholine and oxidized free fatty acids; with lipid oxidation in conjunction with Lp-PLA 2 activity; or with endothelial dysfunction.
  • This invention also provides methods of treating a disease by inhibiting Lp-PLA 2 activity.
  • diseases include, but are not limited to, neurodegeneration disease (e.g., Alzheimer's disease, vascular dementia), atherosclerosis, stroke, metabolic bone disorder (e.g., bone marrow abnormalities), dyslipidemia, Paget's diseases, type II diseases, metabolic syndrome, insulin resistance, and hyperparathyroidism, diabetic ocular disorder (e.g., macular edema, diabetic retinopathy, and posterior uveitis), macular edema, wound healing, rheumatoid arthritis, chronic obstructive pulmonary disease (COPD), psoriasis, and multiple sclerosis.
  • neurodegeneration disease e.g., Alzheimer's disease, vascular dementia
  • atherosclerosis e.g., atherosclerosis
  • stroke e.g., metabolic bone disorder (e.g., bone marrow abnormalities), dyslipidemia, Paget's diseases,
  • the methods comprise administering to a subject in need thereof an effective amount of a compound of present invention. It is not intended that the present invention is limited to any particular stage of the disease (e.g. early or advanced).
  • This invention also provides methods of treating Alzheimer's disease.
  • the methods comprise administering to a subject in need thereof an effective amount of a compound of present invention,
  • This invention also provides methods of treating atherosclerosis.
  • the methods comprise administering to a subject in need thereof an effective amount of a compound of present invention.
  • This invention also provides methods of decreasing beta amyloid (also referred to as " ⁇ ") accumulation in the brain of a subject.
  • the methods comprise administering to a subject in need thereof an effective amount of a compound of present invention.
  • the beta amyloid is Abeta-42.
  • This invention also provides methods for treating eye diseases and disorders by administering a compound of this invention.
  • this invention provides methods of treating macular edema, which comprises administering to the subject an effective amount of a compound of this invention.
  • the macular edema is associated with diabetic eye disease, for example, diabetic retinopathy.
  • the macular edema is associated with posterior uveitis.
  • This invention also provides a use of compounds of this invention in the manufacture of a medicament for treating diseases described herein.
  • This invention also provides compounds of this invention for use in the treatment described herein.
  • disease refers to any alteration in state of the body or of some of the organs, interrupting or disturbing the performance of the functions and/or causing symptoms such as discomfort, dysfunction, distress, or even death to the person afflicted or those in contact with a person.
  • a disease can also include a distemper, ailing, ailment, malady, disorder, sickness, illness, complain, interdisposition and/or affectation.
  • neurodegeneration disease refers to a varied assortment of central nervous system disorders characterized by gradual and progressive loss of neural tissue and/or neural tissue function.
  • a neurodegeneration disease is a class of neurological disorder or disease where the neurological disease is characterized by a gradual and progressive loss of neural tissue, and/or altered neurological function, typically reduced neurological function as a result of a gradual and progressive loss of neural tissue.
  • the neurodegeneration diseases described herein are neurodegeneration diseases or disorders where there is an abnormal blood brain barrier, for example a permeable blood brain barrier. Examples of neurodegeneration diseases where there is a defective blood brain barrier include, but are not limited to, Alzheimer's disease, Huntington's disease, Parkinson's disease, vascular dementia and the like.
  • vascular dementia is also referred to as “multi-infarct dementia”, which refers to a group of syndromes caused by different mechanisms, which all result in vascular lesions in the brain.
  • the main subtypes of vascular dementia are, for example, vascular mild cognitive impairment, multi-infarct dementia, vascular dementia due to a strategic single infarct, (affecting the thalamus, the anterior cerebral artery, the parietal lobes or the cingulated gyrus), vascular dementia due to hemorrhagic lesions, small vessel disease (including, e.g. vascular dementia due to lacunar lesions and Binswanger disease), and mixed Alzheimer's Disease with vascular dementia.
  • blood-brain barrier or "BBB” are used interchangeably herein, and are used to refer to the permeability barrier that exists in blood vessels as they travel through the brain tissue that severely restricts and closely regulates what is exchanged between the blood and the brain tissue.
  • the blood brain barrier components include the endothelial cells that form the innermost lining of all blood vessels, the tight junctions between adjacent endothelial cells that are structural correlate of the BBB, the basement membrane of endothelial cells and the expanded foot process of nearby astrocytes which cover nearly all of the exposed outer surface of the blood vessel.
  • Metabolic bone disease refers to a varied assortment of bone diseases and disorders characterized by gradual and progressive loss of bone tissue. Metabolic bone diseases described herein are metabolic bone diseases whereby there is a condition of diffusely decreased bone density and/or diminished bone strength. Such diseases are characterized by histological appearance. Exemplary metabolic bone diseases include, but are not limited to, osteoporosis which is characterized by decreased mineral and bone matrix, and osteomalacia which is characterized by decreased mineral but intact bone matrix.
  • osteoporosis which is characterized by decreased mineral and bone matrix
  • osteomalacia which is characterized by decreased mineral but intact bone matrix.
  • osteoopenic diseases or “osteopenia” are used interchangeably herein, and refer to conditions with decreased calcification and/or bone density, and is a descriptive term used to refer to all skeletal systems in which decreased calcification and/or bone density is observed. Osteopenia also refers to a reduced bone mass due to inadequate osteiod synthesis.
  • osteoporosis refers to conditions which mineral and/or bone matrix are decreased and/or bone mass is reduced.
  • Alkyl refers to a monovalent, saturated hydrocarbon chain having a specified number of carbon atoms.
  • Ci-C 6 alkyl refers to an alkyl group having from 1 to 6 carbon atoms.
  • alkyl groups contain 1 to 2, 3, 4, or 5 carbon atoms.
  • Alkyl groups may be optionally substituted with one or more substituent as defined herein.
  • Alkyl groups may be straight or branched. In some embodiments, branched alkyl groups may have one, two, or three branches, h one embodiment, alkyl is unsubstituted.
  • Exemplary alkyl includes, but is not limited to, methyl, methylethyl, ethyl, propyl (n-propyl and isopropyl), methylpropyl, butyl (n-butyl, isobutyl, and t-butyl), pentyl (n-pentyl, isopentyl, and neopentyl), and hexyl.
  • alkoxy refers to the group -O-alkyl. In some embodiments, alkoxyl groups contain 1 to
  • alkoxy groups include, but are not limited to, methoxy, ethoxy and propoxy.
  • Halogen refers to fluorine (F), chlorine (CI), bromine (Br), or iodine (I).
  • Halo refers to the halogen radicals: fluoro (-F), chloro (-C1), bromo (-Br), or iodo (-1).
  • Haloalkyl refers to an alkyl group, as defined above, having one or more halogen atoms selected from F, CI, Br, or I, which are substituted on any or all of the carbon atoms of the alkyl group by replacing hydrogen atoms attached to the carbon atoms.
  • exemplary haloalkyl groups include, but are not limited to, chloromethyl, bromoethyl, trifluoromethyl, dichloromethyl.
  • Heteroaryl refers to an aromatic ring containing from 1 to 4 heteroatoms as member atoms in the ring. Heteroaryl groups containing more than one heteroatom may contain different heteroatoms. Heteroaryl groups may be optionally substituted with one or more substituent as defined herein. Heteroaryl groups are monocyclic ring systems having from 5, 6 or 7 member atoms. In some embodiments, heteroaryl groups are monocyclic ring system having 6 member atoms. In other embodiments, heteroaryl group have one nitrogen atom as member atoms. In one embodiment, heteroaryl is unsubstituted. Examples of heteroaryl include, but are not limited to, pyrrolyl, pyrazolyl, imidazolyl, oxazolyl, pyridinyl and pyrimidinyl.
  • Optionally substituted indicates that a group, such as alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkenyl, heterocycloalkyl, or heteroaryl, may be unsubstituted, or the group may be substituted with one or more substituent as defined.
  • substituted in reference to a group indicates that one or more hydrogen atom attached to a member atom (e.g., carbon atom) within the group is replaced with a substituent selected from the group of defined substituents. It should be understood that the term “substituted” includes the implicit provision that such substitution be in accordance with the permitted valence of the substituted atom and the substituent and that the substitution results in a stable compound (i.e. one that does not spontaneously undergo transformation such as by rearrangement, cyclization, or elimination and that is sufficiently robust to survive isolation from a reaction mixture). When it is stated that a group may contain one or more substituent, one or more (as appropriate) member atom within the group may be substituted.
  • a single member atom within the group may be substituted with more than one substituent as long as such substitution is in accordance with the permitted valence of the atom.
  • Suitable substituents are defined herein for each substituted or optionally substituted group.
  • treat in reference to a condition means: (1) to ameliorate the condition or one or more of the biological manifestations of the condition, (2) to interfere with (a) one or more points in the biological cascade that leads to or is responsible for the condition or (b) one or more of the biological manifestations of the condition, (3) to alleviate one or more of the symptoms or effects associated with the condition, and/or (4) to slow the progression of the condition or one or more of the biological manifestations of the condition.
  • subject means a mammalian subject (e.g., dog, cat, horse, cow, sheep, goat, monkey, etc.), and particularly human subjects including both male and female subjects, and including neonatal, infant, juvenile, adolescent, adult and geriatric subjects, and further including various races and ethnicities including, but not limited to, white, black, Asian, American Indian and Hispanic.
  • mammalian subject e.g., dog, cat, horse, cow, sheep, goat, monkey, etc.
  • human subjects including both male and female subjects, and including neonatal, infant, juvenile, adolescent, adult and geriatric subjects, and further including various races and ethnicities including, but not limited to, white, black, Asian, American Indian and Hispanic.
  • pharmaceutically-acceptable salts refers to salts that retain the desired biological activity of the subject compound and exhibit minimal undesired toxicological effects. These pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively.
  • an "effective amount” means that the amount of a compound of this invention will elicit the biological or medical response of a tissue, system, animal or human that is being sought, for instance, by a researcher or clinician.
  • therapeutically effective amount means any amount which, as compared to a corresponding subject who has not received such amount, results in improved treatment, healing, prevention, or amelioration of a disease, disorder, or side effect, or a decrease in the rate of advancement of a disease or disorder.
  • the term also includes within its scope amounts that are effective to enliance normal physiological function.
  • This invention provides, in a first aspect, compounds of Formula I and pharmaceutically acceptable salts thereof:
  • R is H or C,-C 6 alkyl
  • R' is H, halo, or C C 6 alkyl
  • X is -0-, -NH-, -N(C,-C 6 alkyl)-, -S- or -CH 2 -,
  • n 0, 1, 2 or 3, and when X is -CH 2 -, n is 1 or 2,
  • Ar is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of -CN, halo, OH, -NH 2 , -NHR 1 ; -NRjR 2 , CrQalkyl, Ci-C 6 alkoxy, and Ci- haloalkyl, and
  • Y is absent or -0-Ar ⁇ -NH-Ar', -N(C,-C 6 alkyl)-Ar ⁇ or -(CH 2 )-Ar%
  • Ar' is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH 2 ⁇ -NHRj, -NRiR 2 , C C 6 alkyl, Q-Qalkoxy, and Ci-C 6 haloaIkyl, and
  • each occurrence of Rj and R 2 are independently Ci-Ce alkyl.
  • this invention relates to compounds of Formula (I), wherein
  • R is H or CH 3 ,
  • R' is H
  • n 1,
  • Ar is phenyl, which is unsubstituted or substituted with one or more groups selected from the group consisting of -CN, F, CI, CF 3 , and Br, and Y is - ⁇ - ⁇ ', wherein Ar' is phenyl or heteroaryl selected from the group consisting of pyridinyl, and pyrimidinyl, either of which is substituted with one or more groups selected from the group consisting of CN, CF 3 , F, CI, Br, and C3 ⁇ 4,
  • this invention relates to compounds of Formula (I), with the proviso that when R is CH 3 , R' is H, X is O, Ar is unsubstituted phenyl and Y is -OAr', wherein Ar' is phenyl substituted with two F, n is not 2 or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I), wherein R is H or C[-C 3 alkyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds, wherein R is methyl or pharmaceutically acceptable salts thereof. In yet a further embodiment, this invention relates to compounds wherein R is H, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein R' is H or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein X is -O- or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein n is 1 or 2 or pharmaceutically acceptable salts thereof. In a further embodiments, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein n is 1 or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is unsubstituted phenyl or pharmaceutically acceptable salts thereof. In yet a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one or more groups independently selected from the group consisting of -F and -CN, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one group selected from -F or -CN, or pharmaceutically acceptable salts thereof. In one embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one CN, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar', and Ar' is phenyl substituted with one or more groups independently selected from the group consisting of CF 3 , F and CI or Ar' is pyridinyl substituted with one or more groups independently selected from the group consisting of CN and CF 3 , or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one or more groups independently selected from the group consisting of CF 3 , F and CI, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF 3 and one F, or
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF 3 and one CN, or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF 3 and one CI, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is mono-substituted with CF 3 , or pharmaceutically acceptable salts thereof.
  • this invention relates to com ounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar', wherein Ar' is heteroaryl selected from the group consisting of pyridinyl, pyrimidinyl, and imidazolyl, and the heteroaryl is substituted with one or more groups independently selected from the group consisting of CF 3 , CH 3 , F, CI, and CN, or pharmaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is pyridinyl, which is substituted with one or more groups
  • this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is absent, or pharmaceutically acceptable salts thereof.
  • the compounds of Formula (I) has the structure:
  • the compounds of Formula (I) has the structure of Formula (IA),
  • R, R', X, and n are defined in Fonnula (I), Ra, Rb and Rc are independently selected from the group consisting of hydrogen, halo, CF 3 and CN or pharmaceutically acceptable salts thereof.
  • the invention relates to compounds of Formula (IA) wherein
  • R is C3 ⁇ 4 or H
  • R' is H
  • X is O
  • n 1;
  • Ra, Rb and Rc are independently selected from the group consisting of hydrogen, halo, CF 3 and CN;
  • this invention relates to compounds of (IA), wherein R is C r C 3 alkyl or pharmaceutically acceptable salts thereof. In another embodiment, the invention relates to compounds of Formula (IA) wherein R is CH 3 , or pharmaceutically acceptable salts thereof. In another embodiment, the invention relates to compounds of Formula (IA) wherein R is H, or pharmaceutically acceptable salts thereof.
  • this invention also relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein R' is H, or pharmaceutically acceptable salts thereof.
  • the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein X is O, or pharmaceutically acceptable salts thereof.
  • the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein n is 1, or pharmaceutically acceptable salts thereof.
  • the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein Ra, Rb and Rc are independently selected from the group consisting of hydrogen, F, CI, CF 3 and CN, or pharmaceutically acceptable salts thereof.
  • the compound of Formula ( ⁇ ) or (IA) has the structure:
  • the compound of Formula I has the structure of Formula (IB)
  • R, R', X, and n are defined in Formula (I), Rd, Re and Rf are independently selected from the group consisting of hydrogen, halo, and CF 3 or phamiaceutically acceptable salts thereof.
  • this invention relates to compounds of Formula (IB), wherein R is Q- C3 alkyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (IB), wherein R is C3 ⁇ 4 or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (IB), wherein R is H or pharmaceutically acceptable salts thereof.
  • this invention also relates to compounds of Formula (IB) and any of the above embodiments, wherein R' is H or pharmaceutically acceptable salts thereof.
  • this invention also relates to compounds of Formula (IB) and any of the above embodiments, wherein X is -O- or pharmaceutically acceptable salts thereof.
  • this invention also relates to compounds of any of the above embodiments related to Formula (IB), wherein n is 1 or pharmaceutically acceptable salts thereof.
  • this invention also relates to compounds of any of the above embodiments related to Formula (IB), wherein Rd, Re and Rf are independently selected from the group consisting of hydrogen, halo, and CF 3 or pharmaceutically acceptable salts thereof.
  • the compounds of Formula (I) or Formula (IB) has the structure of:
  • the compounds of Formula (I), Formula (IA), Formula (IB), or pharmaceutically acceptable salts thereof may exist in stereoisomeric forms (e.g., it contains one or more asymmetric carbon atoms).
  • the individual stereoisomers (enantiomers and diastereomers) and mixtures of these are included within the scope of the present invention.
  • the invention also covers the individual isomers of the compounds of Formula (I), Formula (IA), Formula (IB), or
  • the invention also includes various deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof.
  • Each available hydrogen atom attached to a carbon atom may be independently replaced with a deuterium atom.
  • a person of ordinary skill in the art will know how to synthesize deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof.
  • Commercially available deuterated starting materials may be employed in the preparation of deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof, or they may be synthesized using conventional techniques employing deuterated reagents (e.g. lithium aluminum deuteride).
  • the salt form of the compounds is also within the scope of the present invention.
  • the pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively.
  • suitable pharmaceutical salts see Berge et al, J. Pharm, Sci., 66, 1-19, 1977; P L Gould, International Journal of Pharmaceutics, 33 (1986), 201-217; and Bighley et al, Encyclopedia of Pharmaceutical Technology, Marcel Dekker Inc, New York 1996, Volume 13, page 453-497.
  • compounds of the present invention may contain an acidic functional group, which is acidic enough to form salts.
  • Representative salts include
  • pharmaceutically-acceptable metal salts such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc salts
  • carbonates and bicarbonates of a pharmaceutically-acceptable metal cation such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc
  • compounds of the present invention may contain a basic group and are therefore capable of forming pharmaceutically-acceptable acid addition salts by treatment with a suitable acid.
  • Suitable acids include pharmaceutically-acceptable inorganic acids and pharmaceutically-acceptable organic acids. These salts may be crystalline or amophorus.
  • Exemplary pharmaceutically-acceptable acid addition salts include hydrochloride, hydrobromide, nitrate, methylnitrate, sulfate, bisulfate, sulfamate, phos hate a acetate, hydroxyacetate, phenylacetate, propionate, butyrate, isobutyrate, valerate, maleate, hydroxymaleate, acrylate, fumarate, malate, tartrate, citrate, salicylate, ⁇ -aminosalicyclate, glycollate, lactate, heptanoate, phthalate, oxalate, succinate, benzoate, o-acetoxybenzoate, chlorobenzoate, methylbenzoate, dinitrobenzoate, hydroxybenzoate, methoxybenzoate, mandelate, tannate, formate, stearate, ascorbate, palmitate, oleate, pyruvate, pamoate, malonate, laurate, glutarate,
  • the pharmaceutically acceptable salts include the L-tartrate, ethanedisulfonate (edisylate), sulfate, phosphate, p-toluenesulfonate (tosylate), hydrochloride salt, methanesulfonate, citrate, fumarate, benzenesulfonate, maleate, hydrobromate, L-lactate, malonate, and S-camphor- 10 -sulfonate. Some of these salts form solvates, some are crystalline.
  • the compounds described herein, their pharmaceutically acceptable salts, or solvates or hydrates of either, may exist in one or more polymorphic form. Therefore, in a further aspect, the invention provides a polymorph of a compound defined herein or their pharmaceutically acceptable salts, or a polymorph of a solvate or hydrate of a compound described herein or a pharmaceutically acceptable salt thereof.
  • the compounds of the present invention may be prepared by standard techniques known in the art and by known processes analogous thereto. General methods for preparing compounds of the present invention are set forth below. All starting material and reagents described in the below general experimental schemes are commercially available.
  • a substituent described herein is not compatible with the synthetic methods described herein, the substituent may be protected with a suitable protecting group that is stable to the reaction conditions.
  • the protecting group may be removed at a suitable point in the reaction sequence to provide a desired intermediate or target compound.
  • suitable protecting groups and the methods for protecting and de-protecting different substituents using such suitable protecting groups are well known to those skilled in the art; examples of which may be found in T. Greene and P. Wuts, Protecting Groups in Chemical Synthesis (3rd ed.), John Wiley & Sons, NY (1999).
  • a substituent may be specifically selected to be reactive under the reaction conditions used. Under these circumstances, the reaction conditions convert the selected substituent into another substituent that is either useful as an intermediate compound or is a desired substituent in a target compound.
  • R a is H, or -(C C 6 )alkyl
  • Rb is -(CH 2 ) n -Ar-Y
  • X is O or S
  • R, Ar, Y, n are as defined in Formula (I)
  • Scheme 1 provides an exemplary synthesis for compounds 6 and 7.
  • the starting material or reagents for Scheme 1 are commercially available (for example TCI Shanghai Fine Chemicals) or are made from commercially available starting materials using methods known to those skilled in the art.
  • Step (i) may be carried out by reacting compound 1 with compound 2 using appropriate reagents such as potassium iodide (KI) in an appropriate solvent such as H 2 0 under a suitable temperature such as about 120°C using microwave radiation to provide compound 3.
  • Step (ii) may be an intra-molecular M s « «o1 ⁇ 2 reaction using appropriate reagents such as diisopropyl azodicarboxylate (DIAD) and triphenylphosphine (Ph 3 P) in a suitable solvent such as
  • DIAD diisopropyl azodicarboxylate
  • Ph 3 P triphenylphosphine
  • Step (iii) may be taken place by reacting compound 4 with a suitable reagent such as phosphorus chloride oxide (POCl 3 ) at an appropriate temperature such as about 90 °C.
  • a suitable reagent such as phosphorus chloride oxide (POCl 3 ) at an appropriate temperature such as about 90 °C.
  • Step (iv) may be carried out by reacting compound 5 with Y-Ar-(CH 2 ) n XH in the presence of a suitable base such as sodium hydride (NaH) in a suitable solvent such as dimethylformamide (DMF) at a suitable temperature such as about 0 °C to provide compound 6 where R, Ar, Y and n are defined in Formula (I) and X is O or S.
  • a suitable base such as sodium hydride (NaH)
  • a suitable solvent such as dimethylformamide (DMF)
  • Step (v) may be carried out by reacting compound 5 with R a R b NH in the presence of a suitable base such as H nig's base under a suitable solvent such as N-methyl-2-pyrrolidinone ( MP) at suitable temperature such as about 150 °C to provide compound 7, where R a is H or - (d -C 6 ) alkyl, R b is -(CH 2 ) n -Ar-Y, and R, Ar, Y and n are defined in Formula (I).
  • a suitable base such as H nig's base
  • a suitable solvent such as N-methyl-2-pyrrolidinone ( MP)
  • MP N-methyl-2-pyrrolidinone
  • Y is absent or -O-Ar', -NH-Ar 1 , -N ⁇ C C 6 alkyl)-Ar ⁇ or -(CH 2 )-Ar'
  • Scheme 2 provides an exemplary synthesis for compound 12.
  • the starting material or reagents for Scheme 2 are commercially available (for example TCI Shanghai Fine Chemicals) or are made from commercially available starting materials using methods known to those skilled in the art.
  • Step (i) may be carried out by reacting compound 8 with compound 9 using appropriate reagents such as K 2 C0 3 in an appropriate solvent such as MeOH under a suitable temperature such as about room temperature to provide compound 10.
  • Step (ii) may be a Sonagashira reaction of compound 10 and compound 5 using appropriate reagents such as tris(dibenzylideneacetone)dipalladium(0) (Pd 2 (dba) 3 ), copper(I) iodide (Cul), Et 3 N, and tri(furan-2-yl)phosphine ((2-fur) 3 P) in a suitable solvent such as toluene at a suitable temperature such as about 50°C.
  • Step (iii) may be taken place by hydrogenation of compound 11 with a suitable reagent such as Pd/C under H 2 atmosphere under a suitable pressure such as 1 bar in a suitable solvent such as MeOH at an appropriate temperature such as about room temperature to afford compound 12, where R, Ar, Y and n are as defined in Formula (I)
  • Mobile phase water containing 0.05% TFA / acetonitrile.
  • Mobile phase water containing 0.04% ammonia/ acetonitrile.
  • the title compound was prepared by a procedure similar to those described for D4 starting from 6- (trifiuoromethyl)3-pyridinol and 3,4,5-trifluorobenzaIdehyde.
  • the title compound was prepared by a procedure similar to those described for D4 starting from 6- (trifluoromethyl) 3-pyridinol and 3, 4-difluorobenzaldehyde.
  • the title compound was prepared by a procedure similar to those described for D5 starting from 3- fluoro-4-((6-(trifluoromethyl)-3-pyridinyl)oxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to those described for D4 starting from 3, 4-difluorophenol and 3, 4-difluorobenzaldehyde.
  • the title compound was prepared by a procedure similar to those described for D5 starting from 4- (3, 4-fluorophenoxy)-3-fluoro-benzaldehyde.
  • the title compound was prepared by a procedure similar to those described for D4 starting from 4- chloro-3-trifluoromethyl-phenol and 4-fluoro-benzaldehyde.
  • the title compound was prepared by a procedure similar to those described for D5 starting from 4- (4-chloro -3 -(trifluoromethyl)phenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- (4-fiuorophenoxy)-5-(hydroxymethyl)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3,4-dichlorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-(3,4,5-trifIuorophenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 startmg from 2- fluoro-5-formylbenzonitrile and 2-fluoro-5-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 4-methyl-lH-imidazole.
  • the title compound was prepared by a procedure similar to that described for D5 starting fluoro-4-(5 -methyl- 1 H-imidazol- 1 -yl)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitriIe.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fiuoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
  • the title com ound was prepared by a procedure similar to that described for D5 starting from 4- (3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting chloro-4-fluorobenzaldehyde and 3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- chloro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from sodium hydride, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluorobenzonitrile and tert-butyl 7- chloro- 5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3-bydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from sodium hydride and 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)benzonitrile and tert-butyl 7-chloro- 5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate).
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- ((5, 6-difluoropyridin-3-yl)oxy)-5-formylbenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3, 4, 5-trifluorobenzaIdehyde and 3-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3, 5- difluoro-4-(3-fluorophenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from (3,5-difluoro-4-(4-fluorophenoxy)phenyl)methanol J NaH and tert-butyl 7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3,4-difluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from (4- (3 ,4-difluorophenoxy)-3 , 5 -difluorophenyl)methanol.
  • the title compound was prepared by a procedure similar to that described for D4 startmg from 2 fluoro-5-formylbenzonitrile and 4-hydroxy-2-(trifluoromethyl)-benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-(trifluoromethyl)pyridine-4-ol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((2-(trifluoromethyl)pyiidin-4-yl)oxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 4-hydroxy-2-(trifiuoromethyl)-benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-hydroxy-2-(trifluoromethyl)-benzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for El starting from (4- (4-chloro-3-(trifluoromethyl)phenoxy)phenyl)methanol, NaH and tert-butyl-7-chloro-5-oxo-2,3- dihydroimidazo [ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate .
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluoroben2onitrile and tert-butyl 7-chloro- 5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxyIate.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 5-(hydroxymethyl)-2-((2-(trifluoromethyI)pyridin-4-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3 hydroxy-5 -(trifluoromethyl)benzonitrile and 4-fluoro-3 -(trifluoromethyl)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- (4-formyl-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 5-(hydroxymethyl)-2-((6-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-(trifluoromethyl)pyridin-4-ol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylberLzonitrile and 2-fluoro-4- hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-( yrirnidin-5-yloxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-chloro-3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for El starting from 2- (4-chloro-3-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile, NaH and tert-butyl 7- chloro-5-oxo-2,3-dihydroimidazo[l 3 2-c]pyrimidine-l(5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3 hydroxy-5-(trifluoromethyl)benzonitrile and 4-fluoro-3-(trifluoromethyl)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, (4-(3,4-dichlorophenoxy)-3-fluorophenyl)methanol and tert-butyl 7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l (5H)-carboxyIate.
  • the title compound was prepared by a procedure similar to that described for El starting from sodium hydride, 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)benzonitriIe and tert-butyl 7- chloro-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3- chloro-4-fluorobenzaldehyde and 3,4-difluorophenol.
  • the title compound was prepared by a H ° prxocedureC simialar to th;at described for D5 starting from 3- chloro-4-(3,4-difluorophenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from sodium hydride, (3-chloro-4-(3,4-difluorophenoxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3 -dihydroimidazo [ 1 ⁇ 2-c]pyrimidine- 1 (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formyIbenzonitrile and 2-chloro-5-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- chIoro-5-(2-cyano-4-formylphenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 5- (trifluoromethyl)pyridin-3-ol and 2-fluoro-5-formylbenzonitriIe.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- fonnyl-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting fluoro-5-(trifluoromethyl)phenol and 2-fluoro-5-formylbenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- (3 -fluoro-5 -(trifluoromethyl)phenoxy) -5-formylbenzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from 2- ((5,6-difluoropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile, NaH and tert-butyl 7-chloro-5-oxo- 2,3 -dihydroimidazo[ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-fluoro-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile and tert-butyl 7-cliloro-5- oxo-2,3 -dihydroimidazo [ 1 ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4 ⁇ difluorobenzaldehyde and 2-(trifluoromethyl)pyridin-4-ol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, (3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3-dihydroimidazo[l : 2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 6- fluoronicotinaldehyde and 3-chloro-5-(trifluoromethyl) phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 6- (3 -chloro-5 -(trifluoromethyl)phenoxy)nicotinaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-chloro-4-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- chloro-4-(2-cyano-4-formylphenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-chloro-4-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- chloro-4-(2-fluoro-4-formyIphenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, (3-fluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3-dihydroimidazo [ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from methyl 5-bromo-6-chloronicotinate and3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- bromo-6-(3-(trifluoromethyl)phenoxy)nicotinic acid.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(2-fluoro-4-formylphenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 5-bromopyridin-3-ol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 5-chloropyridin-3-ol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde (188 mg, 1.32 mmol) and 2-fluoro-5-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 4- fluorobenzaldehyde and 5-(trifluoromethyl)pyridin-3-ol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 5- (trifluoromethyl)pyridin-3-ol and 3,4,5-trifiuorobenza-ldehyde.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3,5- difluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzaIdehyde.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3,4- difluorobenzaldehyde and 4-hydroxy-2-methylbenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3,4- fluorobenzaldehyde and 3-fluoro-5-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((6-(trifluoromethyI)pyridin-3-yl)oxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3 -(trifluoromethyl)benzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 4- (3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for El starting from NaH, 3-(4-(hydroxymethyl)-2-(trifluoromethyl)phenoxy)benzonitrile and tert-butyl-7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for El starting from 5- (hydroxymethyl)-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroirnidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 5-bromopyridin-3-ol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 4- ((5-bromopyridin-3 -yl)oxy)-3 -f iorobenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D5 starting from (4- ((5-bromopyridin-3-yl)oxy)-3-fluorophenyl)methanoI.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3- chloro-4-fluorophenol and 3,4-difluorobenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 4- (3 -chloro-4-fluorophenoxy)-3 -fluorobenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and 3-chloro-4-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-(3-fluorophenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- (hydroxymethyl)-2-(4-(trifluoromethyl)phenoxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 2- (4-fluorophenoxy)-5-(hydroxymethyl)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and 4-chloro-3-(trifluoromethyi)phenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting fluoro-4-hydroxybenzaldehyde and 2-chloro-6-(trifluoromethyl)pyridine.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((6-(trifluoi methyl)pyridin-2-yl)oxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5 -formylbenzonitrile and 4-chloro-3-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorophenol and 4-fmorobenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D163 starting from l,2-difluoro-4-(4-vinyIphenoxy)benzene.
  • the title compound was prepared by a procedure similar to that described for D5 starting (3,5 -difluorophenoxy) -3 -fluorobenzaldehyde .
  • the title compound was prepared by a procedure similar to that described for D4 starting methyl-3-pyridinol and 2-fluoro-5-formylbenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 5- Formyl-2-((6-methylpyridin-3-yl)oxy)benzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-hydroxybenzaldehyde. HPLC was used to monitor the completion of the reaction.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-fluoro-4-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3 ,5-difluoro-4-(3 -fluoro-4-(trifluoromethyl)phenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting fluoro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3,5 difluoro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifIuorobenzaldehyde and 3-chIorophenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- chloro-6-(trifluoromethyl)pyridine and 4-hydroxybenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D162 starting from 4- ((6-(trifluoromethyl)pyridine-2-yl)oxy)benzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D163 starting from 2- (trifluoromethyl)-6-(4-vinylphenoxy)pyridine.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 2- fmoro-5-foimylbenzonitrile and 4-bromo-3-fluorophenol.
  • the title compound was prepared by a procedure similar to that described for D4 starting fluoro-5-formylbenzonitrile and 3-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-hydroxybenzonitrile.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 3- (2-fluoro-4-formy lphenoxy )benzon itri I e .
  • the title compound was prepared by a procedure similar to that described for D162 starting from bromo(methyl)triphenylphosphorane, potassium 2-methylpropan-2-olate and 4-(3,4-difluorophen- oxy)-3-fluorobenzaldehyde.
  • the title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from (4- phenoxyphenyl)methanol .
  • the title compound was prepared by a procedure similar to that described for D4 startin fluorobenzaldehyde and 4-fluoro-3-(trifluoromethyl)phenol.
  • the title compound was prepared by a procedure similar to that described for D5 starting from 4- (3-fluoro-4-(trif1uoromethyl)phenoxy)benzaIdehyde.

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Abstract

Disclosed are 2,3-dihydroimidazo[1,2-c]pyrimidin-5(1H)-one compounds that inhibit Lp-PLA2, processes for their preparation, compositions containing them and their use in the treatment of diseases associated with the activity of Lp-PLA2, for example atherosclerosis, Alzheimer's disease.

Description

2,3-DIHYDROIMIDAZO[1 ,2-C] PYRIMIDIN-5(1 H)-ONE COMPOUNDS USE AS LP-PLA2 INHIBITORS
RELATED APPLICATION
The present application claims priority from PCT International Application No.
PCT/CN201 1/077697, filed on July 27, 2011 at the State Intellectual Property Office of the People's Republic of China, the entire contents of which is incorporated herein by reference.
FIELD OF THE INVENTION
The present invention relates to novel [5, 6] bicyclic pyrimidone compounds, processes for their preparation, intermediates useful in their preparation, pharmaceutical compositions containing them, and their use in therapy for the treatment of diseases or conditions mediated by Lp-PLA2.
BACKGROUND OF THE INVENTION
Lipoprotein-associated phospholipase A2 (Lp-PLA2) previously known as platelet- activating factor acetylhydrolase (PAF-AH), is a phospholipase A2 enzyme involved in hydrolysis of lipoprotein lipids or phospholipids. Lp-PLA2 travels with low-density lipoprotein (LDL) and rapidly cleaves oxidized phosphatidylcholine molecules derived from the oxidation of LDL. (See e.g. , Zalewski A, et al., Arterioscler. Thromb. Vase. Biol, 25, 5, 923-31(2005)). Lp-PLA2 hydrolyzes the sn-2 ester of the oxidized phosphatidylcholines to give lipid mediators, lyso- phosphatidylcholine (lysoPC) and oxidized nonesterified fatty acids (NEFAs). It has been observed that lysoPC and NEFAs elicit inflammatory responses. (See e.g., Zalewski A, et al.
(2005)).
A number of Lp-PLA2 inhibitors and/or uses thereof have been previously described. (See. for example, published patent application nos. W096/13484, W096/19451 , WO97/02242, W097/12963, W097/21675, W097/21676, WO 97/41098, WO97/41099, WO99/24420,
WO00/10980, WO00/66566, WO00/66567, WO00/68208, WO01/60805, WO02/30904,
WO02/3091 1, WO03/015786, WO03/016287, WO03/041712, WO03/042179, WO03/042206, WO03/042218, WO03/086400, WO03/87088, WO08/048867, US 2008/0103156, US
2008/0090851, US 2008/0090852, and WO08/048866.) Disclosed uses include treating disease that involves or is associated with endothelial dysfunction, disease that involves lipid oxidation in conjunction with Lp-PLA2 activity (e.g., associated with the formation of lysophosphatidylcholine and oxidized free fatty acids), and disease that involves activated monocytes, macrophages or lymphocytes or which is associated with increased involvement of monocytes, macrophages or lymphocytes. Examples of diseases or conditions include atherosclerosis (e.g. peripheral vascular atherosclerosis and cerebrovascular atherosclerosis), diabetes, hypertension, angina pectoris, after ischaemia and reperfusion, rheumatoid arthritis, stroke, inflammatory conditions of the brain such as Alzheimer's Disease, various neuropsychiatric disorders such as schizophrenia, myocardial infarction, ischaemia, reperfusion injury, sepsis, acute and chronic inflammation, and psoriasis.
Lp-PLA2 inhibitors and/or uses thereof are also reported, for example, in PCT Publication Nos. WO05/0031 18 (and its Canadian family member CA 2530816A1); WO06/063811 ;
WO06/063813 and WO 2008/141176; JP 200188847; and US Published Patent Application Nos. US 2008/0279846 Al , US 2010/0239565 Al , and US 2008/0280829 Al .
Other researchers have studied the effects related to Lp-PLA2 and inhibitors thereof. For example, research data has also indicated that LysoPC promotes atherosclerotic plaque development, which can ultimately lead to the formation of a necrotic core. (See e.g., Wilensky et al., Current Opinion in Lipidology, 20, 415-420 (2009)). In addition, the effect of Lp-PLA2 inhibitors on atherosclerotic plaque composition was demonstrated in a diabetic and
hypercholesterolemic porcine model of accelerated coronary atherosclerosis. (See e.g., Wilensky et al., Nature Medicine, 10, 1015-1016 (2008)). These research results provided further evidence that Lp-PLA2 inhibitors may be used to treat atherosclerosis.
Additional research has found that high Lp-PLA2 activity is associated with high risk of dementia, including Alzheimer's disease (AD) (See e.g., Van Oijen, et al. Annals of Neurology, 59,139 (2006)). Higher level of oxidized LDL has also been observed in AD patients (See e.g., Kassner et al. Current Alzheimer Research, 5, 358-366 (2008); Dildar, et al., Alzheimer Dis Assoc Disord, 24, April-June ( 2010); Sinem, et al. Current Alzheimer Research, 7, 463-469
(2010)). Further, research data has shown that neuroinflammation is present in AD patients and multiple cytotoxic inflammatory cytokines are up-regulated in AD patients. (See e.g., Colangelo, et al., Journal of Neuroscience Research, 70, 462-473 (2002); Wyss-Coray, Nature Medicine, 12, Sept. (2006)). Research has shown that LysoPC function is a pro-inflammatory factor inducing multiple cytotoxic inflammatory cytokine release (See Shi, et al. Atherosclerosis, 191, 54-62 (2007)). Therefore, this recent research has provided additional evidence that that the inhibitors of Lp-PLA2 can be used to treat AD by inhibiting activity of Lp-PLA2 and reducing lysoPC production.
In addition, the treatment of an Lp-PLA2 inhibitor on a diabetic and hypercholesterolemia swine model demonstrated that the blood-brain-barrier leakage and the brain amyloid beta protein (Αβ) burden, the pathological hallmarks of Alzheimer's disease, were reduced. (See U.S. Patent Application Publication No. 2008/0279846). This publication describes several uses of Lp-PLA2 inhibitors for treating diseases associated with blood-brain-barrier leakage, including, e.g., Alzheimer's disease and vascular dementia.
Further, neuroinflammation, including multiple cytotoxic cytokine release, is a common feature of all neurodegenerative diseases including multiple sclerosis, amyotrophic lateral sclerosis, Parkinson's disease, Alzheimer's disease, etc. (See e.g., Perry, Acta Neuropathol, 120, 277-286 (2010)). As discussed above, Lp-PLA2 inhibitors can reduce inflammation, for example, reducing multiple cytokine release by suppressing lysoPC production. (See e.g., Shi, et al. Atherosclerosis 191, 54—62 (2007)). Thus, inhibiting Lp-PLA2 is a potential therapeutic treatment for
neurodegenerative diseases including multiple sclerosis, amyotrophic lateral sclerosis, Parkinson's disease, etc.
In addition to the inflammatory effect, LysoPC has been implicated in leukocyte activation, induction of apoptosis and mediation of endothelial dysfunction (See, e.g., Wilensky et al,, Current Opinion in Lipidology, 20, 415-420 (2009)). Therefore, it is believed that Lp-PLA2 inhibitors can be used to treat tissue damage associated with diabetes by reducing the production of lysoPC, which can cause a continuous cycle of vascular inflammation and increased reactive oxygen species (ROS) production. In light of the inflammatory roles of Lp-PLA2 and the association between localized inflammatory processes and diabetic retinopathy, it is postulated that Lp-PLA2 can be used to treat diabetic eye disease.
Glaucoma and age-related macular degeneration (AMD) are retina neurodegenerative diseases. Studies suggested that inflammation, including TNF-alpha signaling, may play an important role in the pathogenesis of glaucoma and AMD (See e.g., Buschini et al., Progress in Neurobiology, 95, 14-25 (2011 ); Tezel, Progress in Brain Research, vol. 173, ISSN0079-6123, Chapter 28). Thus, considering Lp-PLA2 inhibitors' function of blocking inflammatory cytokine release (See e.g., Shi, et al. Atherosclerosis, 191 , 54—62 (2007)), it is believed that Lp-PLA2 inhibitors can provide a potential therapeutic application for both glaucoma and AMD.
In view of the number of pathological responses that are mediated by Lp-PLA2, attempts have been made to prepare compounds that inhibit its activity. Though a number of such compounds have been disclosed in the art, there remains a continuing need for inhibitors of Lp- PLA2 which can be used in the treatment of a variety of conditions.
SUMMARY OF THE INVENTION
In a first aspect, this invention relates to compounds of Formula (I) and pharmaceutically acceptable salts thereof,
Figure imgf000004_0001
Formula (I) wherein:
R is H or d-C6aIkyl,
R' is H, halo, or C C6alkyl,
X is -0-, -NH-, -N(CrC6alkyl)-, -S- or -CH2-,
n is 0, 1 , 2 or 3, and when X is -CH2-, n is 1 or 2,
Ar is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH2, -NHRj, -NRiR2, C]-C6alkyl, Q- C6alkoxy, and Ci-C6haloalkyl, and
Y is absent or -OAr\ -NH-Ar', -N(C C6alkyl)-Ar', or -(CH2)-Ar',
wherein Ar' is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH2, -NHRi, -NR]R2, C C6alkyl, Ci-C6alkoxy, and CrQhaloalkyl, and
each occurrence of Rj and R2 are independently Ci-Ce lkyl.
This invention also relates to a pharmaceutical composition comprising a compound of present invention and one or more pharmaceutically acceptable excipients.
The invention also relates to methods of treating a disease associated with the activity of Lp-PLA2, which comprises administering to a subject in need thereof with an effective amount of a compound of present invention. The disease may be associated with the increased involvement of monocytes, macrophages or lymphocytes; with the formation of lysophosphatidylcholine and oxidized free fatty acids; with lipid oxidation in conjunction with Lp-PLA2 activity; or with endothelial dysfunction.
This invention also provides methods of treating a disease by inhibiting Lp-PLA2 activity. Exemplary diseases include, but are not limited to, neurodegeneration disease (e.g., Alzheimer's disease, vascular dementia), atherosclerosis, stroke, metabolic bone disorder (e.g., bone marrow abnormalities), dyslipidemia, Paget's diseases, type II diseases, metabolic syndrome, insulin resistance, and hyperparathyroidism, diabetic ocular disorder (e.g., macular edema, diabetic retinopathy, and posterior uveitis), macular edema, wound healing, rheumatoid arthritis, chronic obstructive pulmonary disease (COPD), psoriasis, and multiple sclerosis.
The methods comprise administering to a subject in need thereof an effective amount of a compound of present invention. It is not intended that the present invention is limited to any particular stage of the disease (e.g. early or advanced).
This invention also provides methods of treating Alzheimer's disease. The methods comprise administering to a subject in need thereof an effective amount of a compound of present invention,
This invention also provides methods of treating atherosclerosis. The methods comprise administering to a subject in need thereof an effective amount of a compound of present invention. This invention also provides methods of decreasing beta amyloid (also referred to as "Αβ") accumulation in the brain of a subject. The methods comprise administering to a subject in need thereof an effective amount of a compound of present invention. In certain embodiment, the beta amyloid is Abeta-42.
This invention also provides methods for treating eye diseases and disorders by administering a compound of this invention. In certain embodiment, this invention provides methods of treating macular edema, which comprises administering to the subject an effective amount of a compound of this invention. In certain embodiment, the macular edema is associated with diabetic eye disease, for example, diabetic retinopathy. In one embodiment, the macular edema is associated with posterior uveitis.
This invention also provides a use of compounds of this invention in the manufacture of a medicament for treating diseases described herein.
This invention also provides compounds of this invention for use in the treatment described herein.
DETAILED DESCRIPTION OF THE INVENTION
As used in the description of the embodiments of the invention and the appended claims, the singular forms "a", "an" and "the" are intended to include the plural forms as well, unless the context clearly indicates otherwise. Also, as used herein, "and/or" refers to and encompasses any and all possible combinations of one or more of the associated listed items. It will be further understood that the terms "comprises" and/or "comprising," when used in this specification, specify the presence of stated features, integers, steps, operations, elements, and/or components, but do not preclude the presence or addition of one or more other features, integers, steps, operations, elements, components, and/or groups thereof.
Generally, the nomenclature used herein and the laboratory procedures in organic chemistry, medicinal chemistiy, biology and virology described herein are those well known and commonly employed in the art. Unless defined otherwise, all technical and scientific terms used herein generally have the same meaning as commonly understood by one of ordinary skill in the art to which this disclosure belongs. In the event that there is a plurality of definitions for a term used herein, those in this section prevail unless stated otherwise.
All patents, patent applications and publications referred to herein are incorporated by reference in their entirety. In case of a conflict in terminology, the present specification is controlling. A. Definitions As used herein, the term "disease" refers to any alteration in state of the body or of some of the organs, interrupting or disturbing the performance of the functions and/or causing symptoms such as discomfort, dysfunction, distress, or even death to the person afflicted or those in contact with a person. A disease can also include a distemper, ailing, ailment, malady, disorder, sickness, illness, complain, interdisposition and/or affectation.
The term "neurodegeneration disease" as used herein refers to a varied assortment of central nervous system disorders characterized by gradual and progressive loss of neural tissue and/or neural tissue function. A neurodegeneration disease is a class of neurological disorder or disease where the neurological disease is characterized by a gradual and progressive loss of neural tissue, and/or altered neurological function, typically reduced neurological function as a result of a gradual and progressive loss of neural tissue. In some embodiments, the neurodegeneration diseases described herein are neurodegeneration diseases or disorders where there is an abnormal blood brain barrier, for example a permeable blood brain barrier. Examples of neurodegeneration diseases where there is a defective blood brain barrier include, but are not limited to, Alzheimer's disease, Huntington's disease, Parkinson's disease, vascular dementia and the like.
The term "vascular dementia" is also referred to as "multi-infarct dementia", which refers to a group of syndromes caused by different mechanisms, which all result in vascular lesions in the brain. The main subtypes of vascular dementia are, for example, vascular mild cognitive impairment, multi-infarct dementia, vascular dementia due to a strategic single infarct, (affecting the thalamus, the anterior cerebral artery, the parietal lobes or the cingulated gyrus), vascular dementia due to hemorrhagic lesions, small vessel disease (including, e.g. vascular dementia due to lacunar lesions and Binswanger disease), and mixed Alzheimer's Disease with vascular dementia.
The phrase "blood-brain barrier" or "BBB" are used interchangeably herein, and are used to refer to the permeability barrier that exists in blood vessels as they travel through the brain tissue that severely restricts and closely regulates what is exchanged between the blood and the brain tissue. The blood brain barrier components include the endothelial cells that form the innermost lining of all blood vessels, the tight junctions between adjacent endothelial cells that are structural correlate of the BBB, the basement membrane of endothelial cells and the expanded foot process of nearby astrocytes which cover nearly all of the exposed outer surface of the blood vessel.
The phrase "metabolic bone disease" as used herein refers to a varied assortment of bone diseases and disorders characterized by gradual and progressive loss of bone tissue. Metabolic bone diseases described herein are metabolic bone diseases whereby there is a condition of diffusely decreased bone density and/or diminished bone strength. Such diseases are characterized by histological appearance. Exemplary metabolic bone diseases include, but are not limited to, osteoporosis which is characterized by decreased mineral and bone matrix, and osteomalacia which is characterized by decreased mineral but intact bone matrix. The term "osteopenic diseases" or "osteopenia" are used interchangeably herein, and refer to conditions with decreased calcification and/or bone density, and is a descriptive term used to refer to all skeletal systems in which decreased calcification and/or bone density is observed. Osteopenia also refers to a reduced bone mass due to inadequate osteiod synthesis.
The term "osteoporosis" refers to conditions which mineral and/or bone matrix are decreased and/or bone mass is reduced.
"Alkyl" refers to a monovalent, saturated hydrocarbon chain having a specified number of carbon atoms. For example, Ci-C6 alkyl refers to an alkyl group having from 1 to 6 carbon atoms. In still other embodiments, alkyl groups contain 1 to 2, 3, 4, or 5 carbon atoms. Alkyl groups may be optionally substituted with one or more substituent as defined herein. Alkyl groups may be straight or branched. In some embodiments, branched alkyl groups may have one, two, or three branches, h one embodiment, alkyl is unsubstituted. Exemplary alkyl includes, but is not limited to, methyl, methylethyl, ethyl, propyl (n-propyl and isopropyl), methylpropyl, butyl (n-butyl, isobutyl, and t-butyl), pentyl (n-pentyl, isopentyl, and neopentyl), and hexyl.
"Alkoxy" refers to the group -O-alkyl. In some embodiments, alkoxyl groups contain 1 to
2, 3, 4, or 5 carbon atoms. Exemplary alkoxy groups include, but are not limited to, methoxy, ethoxy and propoxy.
"Halogen" refers to fluorine (F), chlorine (CI), bromine (Br), or iodine (I). "Halo" refers to the halogen radicals: fluoro (-F), chloro (-C1), bromo (-Br), or iodo (-1).
"Haloalkyl" refers to an alkyl group, as defined above, having one or more halogen atoms selected from F, CI, Br, or I, which are substituted on any or all of the carbon atoms of the alkyl group by replacing hydrogen atoms attached to the carbon atoms. Exemplary haloalkyl groups include, but are not limited to, chloromethyl, bromoethyl, trifluoromethyl, dichloromethyl.
"Heteroaryl" refers to an aromatic ring containing from 1 to 4 heteroatoms as member atoms in the ring. Heteroaryl groups containing more than one heteroatom may contain different heteroatoms. Heteroaryl groups may be optionally substituted with one or more substituent as defined herein. Heteroaryl groups are monocyclic ring systems having from 5, 6 or 7 member atoms. In some embodiments, heteroaryl groups are monocyclic ring system having 6 member atoms. In other embodiments, heteroaryl group have one nitrogen atom as member atoms. In one embodiment, heteroaryl is unsubstituted. Examples of heteroaryl include, but are not limited to, pyrrolyl, pyrazolyl, imidazolyl, oxazolyl, pyridinyl and pyrimidinyl.
"Optionally substituted" indicates that a group, such as alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkenyl, heterocycloalkyl, or heteroaryl, may be unsubstituted, or the group may be substituted with one or more substituent as defined.
As used herein, "substituted" in reference to a group indicates that one or more hydrogen atom attached to a member atom (e.g., carbon atom) within the group is replaced with a substituent selected from the group of defined substituents. It should be understood that the term "substituted" includes the implicit provision that such substitution be in accordance with the permitted valence of the substituted atom and the substituent and that the substitution results in a stable compound (i.e. one that does not spontaneously undergo transformation such as by rearrangement, cyclization, or elimination and that is sufficiently robust to survive isolation from a reaction mixture). When it is stated that a group may contain one or more substituent, one or more (as appropriate) member atom within the group may be substituted. In addition, a single member atom within the group may be substituted with more than one substituent as long as such substitution is in accordance with the permitted valence of the atom. Exemplary substituents include, but are not limited to, halo, hydroxyl, amino, amide, -SH, cyano, nitro, thioalkyl, carboxylic acid, -NH-C(=NH)-NH2, alkyl, alkenyl, alkynyl, alkoxyl, aryl, heteroaryl, cycloalkyl, heterocycloalkyl, in which alkyl, alkenyl, alkynyl, alkoxyl, aryl, heteroaryl, cycloalkyl, thioalkyl and heterocycloalkyl may be further substituted. Suitable substituents are defined herein for each substituted or optionally substituted group.
As used herein, "treat", "treating" or "treatment" in reference to a condition means: (1) to ameliorate the condition or one or more of the biological manifestations of the condition, (2) to interfere with (a) one or more points in the biological cascade that leads to or is responsible for the condition or (b) one or more of the biological manifestations of the condition, (3) to alleviate one or more of the symptoms or effects associated with the condition, and/or (4) to slow the progression of the condition or one or more of the biological manifestations of the condition.
As used herein, "subject" means a mammalian subject (e.g., dog, cat, horse, cow, sheep, goat, monkey, etc.), and particularly human subjects including both male and female subjects, and including neonatal, infant, juvenile, adolescent, adult and geriatric subjects, and further including various races and ethnicities including, but not limited to, white, black, Asian, American Indian and Hispanic.
As used herein, "pharmaceutically-acceptable salts" refers to salts that retain the desired biological activity of the subject compound and exhibit minimal undesired toxicological effects. These pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively.
As used herein, an "effective amount" means that the amount of a compound of this invention will elicit the biological or medical response of a tissue, system, animal or human that is being sought, for instance, by a researcher or clinician. Furthermore, the term "therapeutically effective amount" means any amount which, as compared to a corresponding subject who has not received such amount, results in improved treatment, healing, prevention, or amelioration of a disease, disorder, or side effect, or a decrease in the rate of advancement of a disease or disorder. The term also includes within its scope amounts that are effective to enliance normal physiological function.
B. Compounds
This invention provides, in a first aspect, compounds of Formula I and pharmaceutically acceptable salts thereof:
Figure imgf000010_0001
Formula (I)
wherein:
R is H or C,-C6alkyl,
R' is H, halo, or C C6alkyl,
X is -0-, -NH-, -N(C,-C6alkyl)-, -S- or -CH2-,
n is 0, 1, 2 or 3, and when X is -CH2-, n is 1 or 2,
Ar is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of -CN, halo, OH, -NH2, -NHR1 ; -NRjR2, CrQalkyl, Ci-C6alkoxy, and Ci- haloalkyl, and
Y is absent or -0-Ar\ -NH-Ar', -N(C,-C6alkyl)-Ar\ or -(CH2)-Ar%
wherein Ar' is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH2} -NHRj, -NRiR2, C C6alkyl, Q-Qalkoxy, and Ci-C6haloaIkyl, and
each occurrence of Rj and R2 are independently Ci-Ce alkyl.
In one embodiment, this invention relates to compounds of Formula (I), wherein
R is H or CH3,
R' is H,
X is O,
n is 1,
Ar is phenyl, which is unsubstituted or substituted with one or more groups selected from the group consisting of -CN, F, CI, CF3, and Br, and Y is -Ο-ΑΓ', wherein Ar' is phenyl or heteroaryl selected from the group consisting of pyridinyl, and pyrimidinyl, either of which is substituted with one or more groups selected from the group consisting of CN, CF3, F, CI, Br, and C¾,
or a pharmaceutically acceptable salts thereof.
In one embodiment, this invention relates to compounds of Formula (I), with the proviso that when R is CH3, R' is H, X is O, Ar is unsubstituted phenyl and Y is -OAr', wherein Ar' is phenyl substituted with two F, n is not 2 or pharmaceutically acceptable salts thereof.
In one embodiment, this invention relates to compounds of Formula (I), wherein R is H or C[-C3alkyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds, wherein R is methyl or pharmaceutically acceptable salts thereof. In yet a further embodiment, this invention relates to compounds wherein R is H, or pharmaceutically acceptable salts thereof.
In another embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein R' is H or pharmaceutically acceptable salts thereof.
In another embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein X is -O- or pharmaceutically acceptable salts thereof.
In another embodiments, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein n is 1 or 2 or pharmaceutically acceptable salts thereof. In a further embodiments, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein n is 1 or pharmaceutically acceptable salts thereof.
In another embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is unsubstituted phenyl or pharmaceutically acceptable salts thereof. In yet a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one or more groups independently selected from the group consisting of -F and -CN, or pharmaceutically acceptable salts thereof. In one embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one group selected from -F or -CN, or pharmaceutically acceptable salts thereof. In one embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Ar is phenyl, which substituted with one CN, or pharmaceutically acceptable salts thereof.
In certain embodiments, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar', and Ar' is phenyl substituted with one or more groups independently selected from the group consisting of CF3, F and CI or Ar' is pyridinyl substituted with one or more groups independently selected from the group consisting of CN and CF3, or pharmaceutically acceptable salts thereof. In another embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one or more groups independently selected from the group consisting of CF3, F and CI, or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF3 and one F, or
phannaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF3 and one CN, or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is substituted with one CF3 and one CI, or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is phenyl, which is mono-substituted with CF3, or pharmaceutically acceptable salts thereof. In yet a further embodiment, this invention relates to com ounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar', wherein Ar' is heteroaryl selected from the group consisting of pyridinyl, pyrimidinyl, and imidazolyl, and the heteroaryl is substituted with one or more groups independently selected from the group consisting of CF3, CH3, F, CI, and CN, or pharmaceutically acceptable salts thereof. In some embodiments, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is -O-Ar' and Ar' is pyridinyl, which is substituted with one or more groups
independently selected from the group consisting of CF3 and CN, or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (I) and any of the above applicable embodiments, wherein Y is absent, or pharmaceutically acceptable salts thereof.
In one embodiment, the compounds of Formula (I) has the structure:
Figure imgf000012_0001
Figure imgf000013_0001
or a pharmaceutically acceptable salt thereof.
In another embodiment, the compounds of Formula (I) has the structure of Formula (IA),
Figure imgf000013_0002
Formula (IA)
wherein R, R', X, and n are defined in Fonnula (I), Ra, Rb and Rc are independently selected from the group consisting of hydrogen, halo, CF3 and CN or pharmaceutically acceptable salts thereof.
In one embodiment, the invention relates to compounds of Formula (IA) wherein
R is C¾ or H;
R' is H;
X is O;
n is 1; and
Ra, Rb and Rc are independently selected from the group consisting of hydrogen, halo, CF3 and CN;
or pharmaceutically acceptable salts thereof. In one embodiment, this invention relates to compounds of (IA), wherein R is CrC3 alkyl or pharmaceutically acceptable salts thereof. In another embodiment, the invention relates to compounds of Formula (IA) wherein R is CH3, or pharmaceutically acceptable salts thereof. In another embodiment, the invention relates to compounds of Formula (IA) wherein R is H, or pharmaceutically acceptable salts thereof.
In certain embodiment, this invention also relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein R' is H, or pharmaceutically acceptable salts thereof.
In another embodiment, the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein X is O, or pharmaceutically acceptable salts thereof.
In certain embodiment, the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein n is 1, or pharmaceutically acceptable salts thereof.
In another embodiment, the invention relates to compounds of Formula (IA) and any of the above applicable embodiments, wherein Ra, Rb and Rc are independently selected from the group consisting of hydrogen, F, CI, CF3 and CN, or pharmaceutically acceptable salts thereof.
In one embodiment, the compound of Formula (Γ) or (IA) has the structure:
Figure imgf000014_0001
Figure imgf000015_0001

Figure imgf000016_0001
or a pharmaceutically acceptable salt thereof.
In another embodiment, the compound of Formula I has the structure of Formula (IB)
Figure imgf000016_0002
Formula (IB)
s
wherein, R, R', X, and n are defined in Formula (I), Rd, Re and Rf are independently selected from the group consisting of hydrogen, halo, and CF3 or phamiaceutically acceptable salts thereof.
In one embodiment, this invention relates to compounds of Formula (IB), wherein R is Q- C3 alkyl or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (IB), wherein R is C¾ or pharmaceutically acceptable salts thereof. In a further embodiment, this invention relates to compounds of Formula (IB), wherein R is H or pharmaceutically acceptable salts thereof.
In another embodiment, this invention also relates to compounds of Formula (IB) and any of the above embodiments, wherein R' is H or pharmaceutically acceptable salts thereof.
In another embodiment, this invention also relates to compounds of Formula (IB) and any of the above embodiments, wherein X is -O- or pharmaceutically acceptable salts thereof.
In another embodiment, this invention also relates to compounds of any of the above embodiments related to Formula (IB), wherein n is 1 or pharmaceutically acceptable salts thereof.
In another embodiment, this invention also relates to compounds of any of the above embodiments related to Formula (IB), wherein Rd, Re and Rf are independently selected from the group consisting of hydrogen, halo, and CF3 or pharmaceutically acceptable salts thereof.
In one embodiment, the compounds of Formula (I) or Formula (IB) has the structure of:
Figure imgf000017_0001
or a pharmaceutically acceptable salt thereof.
The compounds of Formula (I), Formula (IA), Formula (IB), or pharmaceutically acceptable salts thereof may exist in stereoisomeric forms (e.g., it contains one or more asymmetric carbon atoms). The individual stereoisomers (enantiomers and diastereomers) and mixtures of these are included within the scope of the present invention. The invention also covers the individual isomers of the compounds of Formula (I), Formula (IA), Formula (IB), or
pharmaceutically acceptable salts thereof as mixtures with isomers thereof in which one or more chiral centers are inverted. Likewise, it is understood that the compounds of Formula (I), Formula (IA), Formula (IB), or pharmaceutically acceptable salts thereof may exist in tautomeric forms other than that shown in the formula and these are also included within the scope of the present invention. It is to be understood that the present invention includes all combinations and subsets of the particular groups defined hereinabove. The scope of the present invention includes mixtures of stereoisomers as well as purified enantiomers or enantiomerically/diastereomerically enriched mixtures. Also included within the scope of the invention are individual isomers of the compounds of Formula (I), Formula (IA), Formula (IB), or pharmaceutically acceptable salts thereof, as well as any wholly or partially equilibrated mixtures thereof. The present invention also includes the individual isomers of the compounds of Formula (I), Formula (IA), Formula (IB), or
pharmaceutically acceptable salts thereof as well as mixtures with isomers thereof in which one or more chiral centers are inverted. It is to be understood that the present invention includes all combinations and subsets of the particular groups defined hereinabove. The different isomeric forms may be separated or resolved one from the other by conventional methods, or any given isomer may be obtained by conventional synthetic methods or by stereospecific or asymmetric syntheses.
The invention also includes various deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof. Each available hydrogen atom attached to a carbon atom may be independently replaced with a deuterium atom. A person of ordinary skill in the art will know how to synthesize deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof. Commercially available deuterated starting materials may be employed in the preparation of deuterated forms of compounds of Formula (I), Formula (IA), Formula (IB) or pharmaceutically acceptable salts thereof, or they may be synthesized using conventional techniques employing deuterated reagents (e.g. lithium aluminum deuteride).
In addition to the free base form of the compounds described herein, the salt form of the compounds is also within the scope of the present invention. The pharmaceutically-acceptable salts may be prepared in situ during the final isolation and purification of the compound, or by separately reacting the purified compound in its free acid or free base form with a suitable base or acid, respectively. For reviews on suitable pharmaceutical salts see Berge et al, J. Pharm, Sci., 66, 1-19, 1977; P L Gould, International Journal of Pharmaceutics, 33 (1986), 201-217; and Bighley et al, Encyclopedia of Pharmaceutical Technology, Marcel Dekker Inc, New York 1996, Volume 13, page 453-497.
In certain embodiments, compounds of the present invention may contain an acidic functional group, which is acidic enough to form salts. Representative salts include
pharmaceutically-acceptable metal salts such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc salts; carbonates and bicarbonates of a pharmaceutically-acceptable metal cation such as sodium, potassium, lithium, calcium, magnesium, aluminum, and zinc;
pharmaceutically-acceptable organic primary, secondary, and tertiary amines including aliphatic amines, aromatic amines, aliphatic diamines, and hydroxy alkylamines such as methylamine, ethylamine, diethylamine, triethylamine, ethylenediamine, ethanolamine, diethanolamine, and cyclohexylamine. In certain embodiments, compounds of the present invention may contain a basic group and are therefore capable of forming pharmaceutically-acceptable acid addition salts by treatment with a suitable acid. Suitable acids include pharmaceutically-acceptable inorganic acids and pharmaceutically-acceptable organic acids. These salts may be crystalline or amophorus.
Exemplary pharmaceutically-acceptable acid addition salts include hydrochloride, hydrobromide, nitrate, methylnitrate, sulfate, bisulfate, sulfamate, phos hatea acetate, hydroxyacetate, phenylacetate, propionate, butyrate, isobutyrate, valerate, maleate, hydroxymaleate, acrylate, fumarate, malate, tartrate, citrate, salicylate, ^-aminosalicyclate, glycollate, lactate, heptanoate, phthalate, oxalate, succinate, benzoate, o-acetoxybenzoate, chlorobenzoate, methylbenzoate, dinitrobenzoate, hydroxybenzoate, methoxybenzoate, mandelate, tannate, formate, stearate, ascorbate, palmitate, oleate, pyruvate, pamoate, malonate, laurate, glutarate, glutamate, estolate, methanesulfonate (mesylate), ethanesulfonate (esylate), 2-hydroxyethanesulfonate,
benzenesulfonate (besylate), ?-aminobenzenesulfonate, )-toluenesulfonate (tosylate), and napthalene-2 -sulfonate. In some embodiments, the pharmaceutically acceptable salts include the L-tartrate, ethanedisulfonate (edisylate), sulfate, phosphate, p-toluenesulfonate (tosylate), hydrochloride salt, methanesulfonate, citrate, fumarate, benzenesulfonate, maleate, hydrobromate, L-lactate, malonate, and S-camphor- 10 -sulfonate. Some of these salts form solvates, some are crystalline.
The compounds described herein, their pharmaceutically acceptable salts, or solvates or hydrates of either, may exist in one or more polymorphic form. Therefore, in a further aspect, the invention provides a polymorph of a compound defined herein or their pharmaceutically acceptable salts, or a polymorph of a solvate or hydrate of a compound described herein or a pharmaceutically acceptable salt thereof. C. Synthesis of Compounds
The process to be utilized in the preparation of the compounds described herein depends upon the desired compounds. Such factors as the selection of the specific substituent and various possible locations of the specific substituent all play a role in the path to be followed in the preparation of the specific compounds of this invention. Those factors are readily recognized by one of ordinary skill in the art.
In general, the compounds of the present invention may be prepared by standard techniques known in the art and by known processes analogous thereto. General methods for preparing compounds of the present invention are set forth below. All starting material and reagents described in the below general experimental schemes are commercially available.
The skilled artisan will appreciate that if a substituent described herein is not compatible with the synthetic methods described herein, the substituent may be protected with a suitable protecting group that is stable to the reaction conditions. The protecting group may be removed at a suitable point in the reaction sequence to provide a desired intermediate or target compound. Suitable protecting groups and the methods for protecting and de-protecting different substituents using such suitable protecting groups are well known to those skilled in the art; examples of which may be found in T. Greene and P. Wuts, Protecting Groups in Chemical Synthesis (3rd ed.), John Wiley & Sons, NY (1999). In some instances, a substituent may be specifically selected to be reactive under the reaction conditions used. Under these circumstances, the reaction conditions convert the selected substituent into another substituent that is either useful as an intermediate compound or is a desired substituent in a target compound.
Scheme 1
Figure imgf000020_0001
Ra is H, or -(C C6)alkyl
Rb is -(CH2)n-Ar-Y
X is O or S
R, Ar, Y, n are as defined in Formula (I)
Scheme 1 provides an exemplary synthesis for compounds 6 and 7. The starting material or reagents for Scheme 1 are commercially available (for example TCI Shanghai Fine Chemicals) or are made from commercially available starting materials using methods known to those skilled in the art.
Step (i) may be carried out by reacting compound 1 with compound 2 using appropriate reagents such as potassium iodide (KI) in an appropriate solvent such as H20 under a suitable temperature such as about 120°C using microwave radiation to provide compound 3. Step (ii) may be an intra-molecular M s««o½ reaction using appropriate reagents such as diisopropyl azodicarboxylate (DIAD) and triphenylphosphine (Ph3P) in a suitable solvent such as
tetrahydrofiiran (THF) at a suitable temperature such as room temperature. Step (iii) may be taken place by reacting compound 4 with a suitable reagent such as phosphorus chloride oxide (POCl3) at an appropriate temperature such as about 90 °C.
Step (iv) may be carried out by reacting compound 5 with Y-Ar-(CH2)nXH in the presence of a suitable base such as sodium hydride (NaH) in a suitable solvent such as dimethylformamide (DMF) at a suitable temperature such as about 0 °C to provide compound 6 where R, Ar, Y and n are defined in Formula (I) and X is O or S.
Step (v) may be carried out by reacting compound 5 with RaRbNH in the presence of a suitable base such as H nig's base under a suitable solvent such as N-methyl-2-pyrrolidinone ( MP) at suitable temperature such as about 150 °C to provide compound 7, where Ra is H or - (d -C6) alkyl, Rb is -(CH2)n-Ar-Y, and R, Ar, Y and n are defined in Formula (I).
Scheme 2
Figure imgf000021_0001
R = H, CrC6a!kyl; n = 0 or 1
Y is absent or -O-Ar', -NH-Ar1, -N{C C6alkyl)-Ar\ or -(CH2)-Ar'
Ar and Ar' are as defined in Formula (I)
Scheme 2 provides an exemplary synthesis for compound 12. The starting material or reagents for Scheme 2 are commercially available (for example TCI Shanghai Fine Chemicals) or are made from commercially available starting materials using methods known to those skilled in the art.
Scheme 2 provides an exemplary synthesis for compound 12. Step (i) may be carried out by reacting compound 8 with compound 9 using appropriate reagents such as K2C03 in an appropriate solvent such as MeOH under a suitable temperature such as about room temperature to provide compound 10. Step (ii) may be a Sonagashira reaction of compound 10 and compound 5 using appropriate reagents such as tris(dibenzylideneacetone)dipalladium(0) (Pd2(dba)3), copper(I) iodide (Cul), Et3N, and tri(furan-2-yl)phosphine ((2-fur)3P) in a suitable solvent such as toluene at a suitable temperature such as about 50°C. Step (iii) may be taken place by hydrogenation of compound 11 with a suitable reagent such as Pd/C under H2 atmosphere under a suitable pressure such as 1 bar in a suitable solvent such as MeOH at an appropriate temperature such as about room temperature to afford compound 12, where R, Ar, Y and n are as defined in Formula (I)
All temperatures are reported in degrees Celsius. All other abbreviations are as described in the ACS Style Guide (American Chemical Society, Washington, DC, 19S6).
LCMS Conditions:
1) Acidic conditions:
Mobile phase: water containing 0.05 % TFA / 0.05% acetonitrile
Column: Agilent SB-C18 4.6 x 30 mm-1.8 microns
Detection: MS and photodiode array detector (PDA)
2) Basic conditions:
Mobile phase: water containing 10 mmol NH4HC03 / acetonitrile
Column: XBridgeTM CI 8 4.6 x 50 mm-3.5 microns
Detection: MS and photodiode array detector (PDA)
MDAP Conditions:
1) Acidic conditions:
Instrument: Waters instrument
Column: Sunfire Prep CI 8 column (5 urn, 19 x 50 mm)
Mobile phase: water containing 0.05% TFA / acetonitrile.
2) Basic conditions:
Instrument: Waters instrument
Column: Xbridge Prep CI 8 column (5 um, 19 x 50 mm)
Mobile phase: water containing 0.04% ammonia/ acetonitrile.
Abbreviations and Resource Sources
The following abbreviations and resources are used herein below:
ISCO system - Teledyne ISCO (http://www.isco.com html/seFlashChromatography.html) r.t/rt RT - room temperature
ACN - acetonitrile
Aq. - aqueous
(BOC)20 - di-tert-butyl dicarbonate
CDI— di( 1 H-imidazol- 1 -yl)methanone DAST - diethylaminosulfur trifluoride
DCM - dichloromethane
DIAD - diisopropyl azodiformate
DIPEA -N, N-diisopropyletliylamine
DMA - N,N-dimethylacetamide
DMAP~4-dimethylaminopyridine
DME - 1,2-dimethoxyethane
DMF - dimethylformamide
DMSO - dimethyl sulfoxide
EA - ethyl acetate
FC- flash chromatography
NBS - N-bromosuccinamide
NIS - N-iodosuccinimide
NMP - N-methyl-2-pyrrolidone
TEA - triethylamine
TFA - trifluoro acetic acid
THF - tetrahydrofuran
PE - petroleum ether
DIBAL-H - diisobutylaluminum hydride
9-ΒΒΝ - 9-borabicyclo[3,3}l]nonane
Examples
The following synthetic processes and examples are provided to more specifically illustrate the invention. These examples are not intended to limit the scope of the invention, but rather to provide guidance to the skilled artisan to prepare and use the compounds, compositions, and methods of the invention. While particular embodiments of the invention are described, the skilled artisan will appreciate that various changes and modifications can be made without departing from the spirit and scope of the invention. Dl: 6-((2-hydroxyethyl)(methyI)amino)pyrimidine-2,4(lH,3H)-dione
Figure imgf000023_0001
To a microwave reaction tube 2-(methylamino)ethanol (1.652 g, 22 mmol), 6-chloropyrimidine- 2,4(1 H,3H)-dione (1.465 g, 10 mmol), potassium iodide (KI) (0.017 g, 0.1 mmol) and water (20 mL) were added. The mixture was heated to 120 °C by microwave (Biotage Initiator) and stirred for 2 h. Then the solution was concentrated in vacuo to remove all the water. EtOH (10 mL) was added to the resultant residue. The suspension was filtered and the filter cake was collected to afford the title compound as a light-yellow solid (1.390 g, 75 % yield),
LC-MS (ESI): m/z 186 [M + H] +; 0.34 min (ret time).
D2 : l-methyl-2, 3-dihydroiniidazo[l,2-c]pyriiiiidine-5,7(lH,6H)-dione
Figure imgf000024_0001
To a suspension of 6-((2-hydroxyethyl)(methyI)arrnno)pyrimidine-2,4(lH,3H)-dione (0.463 g, 2.5 mmol) in tetrahydrofuran (310 ml) at rt was added Ph3P (1.967 g, 7.50 mmol), then DIAD (1.458 ml, 7.50 mmol) was added dropwise. The reaction mixture was stirred at rt for 3 h, and concentrated. The residue was partitioned between ethyl ether and water. The aqueous phase was separated, washed with ethyl ether again, and then concentrated to afford the title compound as a light-yellow solid (0.414 g, 99 % yield).
LC-MS (ESI): m/z 168 [M + H] + ; 0.48 min (ret time).
D3: 7-chloro-l-methyI-2, 3-dihydroimidazo [1, 2-c]pyrimidin-5(lH)-one
Figure imgf000024_0002
A suspension of l-methyl-2, 3-dihydroimidazo[l ,2-c]pyrimidine-5,7(lH,6H)-dione (0.41 g, 2.45 mmol) in POC (15 mL, 161 mmol) was stirred at 90 °C for 6 h. The suspension was concentrated in vacuo to remove all of POCl3. Cold water was added to the resultant residue, and then solid NaOH was added dropwise to adjust pH to - 12. The solution was stirred at rt for 2 h. Aqueous HCl was added to adjust pH to ~7. Purification via Mass Directed AutoPrep (MDAP) afforded the title compound as a white solid (0.42 g, 93 % yield).
LC-MS (ESI): m z 186 [M + H] + ; 0.45 min (ret time).
D4 : 5-Formyl-2-{ [3-(trifluoromet e
Figure imgf000024_0003
Potassium carbonate (1.85 g, 13.41 mmol) was added to a solution of 2-fluoro-5-formyl- benzonitrile (2.0 g, 13.41 mmol) and 3-trifIuoromethyl-phenol (1.63 mL, 13.41 mmol) in DMF (10 mL). The reaction mixture was stirred at 60 °C for 2h with microwave radiation. The resultant mixture was filtrated, and then concentrated. Purification via Flash Chromatography (FC) afforded the title compound as a white solid (3 g, 73 % yield).
LC-MS (ESI): m/z 292[M + H] +, 3.38 min (ret time).
D5: 5-(Hydroxymethyl)-2-{[3-(tr oromethyl)phenyl]oxy}benzonitrile
Figure imgf000025_0001
NaBELt (0.39 g, 10.30 mmol) was added to a solution of 5-formyl-2-{[3-
(trifluoromethyl)phenyl]oxy}benzonitrile (5 g, 17.17 mmol) in methanol (30 mL) at 0 °C, and then the mixture was stirred at rt for 30 min. The reaction mixture was quenched by acetone and concentrated. The residue was purified via IS CO (DCM: MeOH =20: 1) to afford the title compound as a clear oil (5.5 g, 95 % yield).
LC-MS (ESI): m/z 294[M + H] + , 3.09 min (ret time).
'H MR (400 MHz, CDC13) a: 7.72 (s, 1 H)} 7.5 (m, 3 H), 7.32 (s, 1 H), 7.25 (s, 1 H), 6.92 (d, J= 8.8 Hz, 1 H), 4.72 (s, 2 H).
D6: 3, 5-difluoro-4-((6-(trifluoromethyl)-3-pyridinyl)oxy)benzaldehyde
Figure imgf000025_0002
The title compound was prepared by a procedure similar to those described for D4 starting from 6- (trifiuoromethyl)3-pyridinol and 3,4,5-trifluorobenzaIdehyde.
LC-MS (ESI): m/z 304[M + H] +, 3.31 min (ret time).
D7 : (3, 5-difluoro-4-((6-(trifluo methanol
Figure imgf000025_0003
The title compound was prepared by a procedure similar to those described for DS starting from 3, 5-difluoro-4-((6-(trifluoromethyl)-3-pyridinyl)oxy)benzaldehyde. LC-MS (ESI): m z 306[M + H] +, 3.01 min (ret time).
D8 : 3-fluoro-4-((6-(trifluoromethyl)-3-pyridinyl)oxy)benzaldehyde
Figure imgf000026_0001
The title compound was prepared by a procedure similar to those described for D4 starting from 6- (trifluoromethyl) 3-pyridinol and 3, 4-difluorobenzaldehyde.
LC-MS (ESI): m z 286[M + H] \ 3.20 min (ret time). D9: (3-fluoro-4-((6-(trifluorom ethanol
Figure imgf000026_0002
The title compound was prepared by a procedure similar to those described for D5 starting from 3- fluoro-4-((6-(trifluoromethyl)-3-pyridinyl)oxy)benzaldehyde.
LC-MS (ESI): m/z 288[M + H] +, 2.88 min (ret time).
D10: 4-(3, 4-fluorophenoxy)-3-fluoro-benzaIdehyde
Figure imgf000026_0003
The title compound was prepared by a procedure similar to those described for D4 starting from 3, 4-difluorophenol and 3, 4-difluorobenzaldehyde.
LC-MS (ESI): m/z 253[M + H] +, 3.34 min (ret time).
Dl 1 : (4-(3,4-fluorophenoxy)-3-flu
Figure imgf000026_0004
The title compound was prepared by a procedure similar to those described for D5 starting from 4- (3, 4-fluorophenoxy)-3-fluoro-benzaldehyde.
LC-MS (ESI): m/z 237[M -17] +, 2.99 min (ret time). D 12 : 4-(4-Chloro-3-(tnfluoromethyl)phenoxy)benzaldeh de
Figure imgf000027_0001
The title compound was prepared by a procedure similar to those described for D4 starting from 4- chloro-3-trifluoromethyl-phenol and 4-fluoro-benzaldehyde.
LC-MS (ESI): m/z 301 [M+l]+ ; 3.79 min (ret time).
D13: (4-(4-Chloro-3-(trifluorom ol
The title compound was prepared by a procedure similar to those described for D5 starting from 4- (4-chloro -3 -(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 285[M -17] +, 3.48 min (ret time).
D14
(4-(3,4-difluorophenoxy)-3-fluorophenyl)methanamine
Figure imgf000027_0003
To a mixture of 4-(3,4-difluorophenoxy)-3-fluorobenzaldehyde (300 mg, 1.19 mmol) and 7 M N¾ in MeOH (10 mL) was added titanium isopropoxide (0.712 niL, 2.38 mmol). The reaction mixture was stirred overnight at rt. Then, NaBFL, (54.0 mg, 1.43 mmol) was added in portions. The mixture was stirred at rt for 4 h, and quenched with water and filtered. The organic part was extracted with ethyl acetate. Combined organic portions were dried over Na2S04, filtered and concentrated. Purification via Biotage reverse phase chromatography (acetonitrile/water, 5%-95% with 0.25% TFA) afforded the title product (100 mg) as a white solid.
LC-MS (ESI): m/z 237 [M + H]+ ; 2.29 min (ret time).
D15
(4-(4-chloro-3-(trifluoromethyl)p e
Figure imgf000027_0004
The title compound was prepared by a procedure similar to that described for D14 starting from 4-
(4-chloro-3-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 285 [M - NH3 + H]+ ; 2.80 min (ret time). D16
2-(4-fluorophenoxy)-5-formylbenzonitriIe.
Figure imgf000028_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-fluorophenol.
LC-MS (ESI): m/z 242 [M + H]+; 3.12 min (ret time).
D17
2-(4-fluorophenoxy)-5-(hydroxymethyl)benzonitrile.
Figure imgf000028_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (4-fiuorophenoxy)-5-(hydroxymethyl)benzonitrile.
LC-MS (ESI): m/z 244 [M + H]+; 2.80 min (ret time).
D18
4-(3,4-dichIorophenoxy)-3-fluorobenzaldehyde
Figure imgf000028_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3,4-dichlorophenol.
LC-MS (ESI): m z no [M + H]+; 1.83min (ret time).
D19
(4-(3,4-dichIorophenoxy)-3-fluorophenyl)methanol
Figure imgf000029_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(3,4-dichlorophenoxy)-3-fluorobenzaldehyde.
LC-MS (ESI): m/z no [M + H]+; 1.79 min (ret time).
D20
3-fluoro-4-(3,4,5-trifluoroptaenoxy)benzaldehyde
Figure imgf000029_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3,4,5-trifluorophenol,
LC-MS (ESI): m/z no [M + H]+ ; 1.80 min (ret time).
D21
(3-fluoro-4-(3,4,5-trifluorophenoxy)phenyl)methanol
Figure imgf000029_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-(3,4,5-trifIuorophenoxy)benzaldehyde.
LC-MS (ESI): m/z 255 [M - H20 + H]+ ; 1.68 min (ret time). D22
N-(2-bromoethyl)-2,6-dichloropyrimidin-4-amine
Figure imgf000029_0004
To a solution of 2,4,6 -trichloropyrimidine (10 g, 54.5 mmol) and triethylamine (1 1.0 g, 109 mmol) in acetonitrile (15 ml) was added dropwise triethylamine (0.552 g, 5.45 mmol). The mixtrue was stirred for 3 h, diluted with water (40 mL) and extracted with ethyl acetate (20 mL X 2). Combined organic parts were washed with brine (30 mL X 2), dried over Na2S0 and concentrated. The crude product (10 g) was directly used into next step without further purification.
LC-MS (ESI): m/z 270 [M + H]+ ; 1.44 min (ret time)
D23
7-chloro-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000030_0001
To a mixture of N-(2-bromoethyl)-2,6-dichloropyiimidin-4-amine (10 g, 18 mmol) in 1,4-dioxane (30 mL) and water (30.0 mL) was added K2C03 (4.85 g, 35.1 mmol). The reaction mixture was stirred at 70 °C for 4 h, and then directly used into next step without further purification.
LC-MS (ESI): m/z 172 [M + H]+ ; 0.51 min (ret time)
D24
tert-butyl7-chIoro-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)-carbox-ylate
Figure imgf000030_0002
To the above mixture was added Boc20 (1.999 g, 11.65 mmol) and DMAP (0.142 g, 1.17 mmol). The reaction mixture was stirred at rt for 3 h, diluted with brine (30 mL) and extracted with ethyl acetate (20 mL X 2). Combined organic parts were washed with brine (20 mL X 2) , dried over Na2S04 and concentered. Purification via column on silica gel (eluent: ethylacetate) afforded the title product (1.5 g) as a white solid.
LC-MS (ESI): m/z 272 [M + H]+ ;1.24 min (ret time)
D25
7-chloro-l-isopropyl-2,3-dihydroimidazo[l,2-c]pyrimidiii-5(lH)-
Figure imgf000030_0003
A mixture of 7-chloro-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (700 mg, 4.08 mmol), 2- iodopropane (1.04 g, 6.12 mmol) and Cs2C03 (2.66 g, 8.16 mmol) in acetonitrile (15 mL) was refluxed for 3 h, filtered and concentrated to remove solvent to get crude product (700 mg) without further purification.
LC-MS (ESI): m/z 214 [M + H]+ ;0.93 min (ret time)
2-(3-cyano-4-fluorophenoxy)-5-formylbenzonitrile
Figure imgf000031_0001
The title compound was prepared by a procedure similar to that described for D4 startmg from 2- fluoro-5-formylbenzonitrile and 2-fluoro-5-hydroxybenzonitrile.
LC-MS (ESI): m/z 265 [M - H]" ; 1.63 min (ret time).
5-(2-cyano-4-(hydroxymethyI)phenoxy)-2-fluorobenzonitrile
Figure imgf000031_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
(3-cyano-4-fluorophenoxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 251 [M - H20 + H]+ ; 1.78 min (ret time).
D28
3-fluoro-4-(5-methyl-lH-imidazol-l
Figure imgf000031_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 4-methyl-lH-imidazole.
LC-MS (ESI): m z 205 [M + H]+ ; 1.35min (ret time).
D29 (3-fluoro-4-(5-methyI-lH-imidazol-l l
Figure imgf000032_0001
The title compound was prepared by a procedure similar to that described for D5 starting fluoro-4-(5 -methyl- 1 H-imidazol- 1 -yl)benzaldehyde.
LC-MS (ESI): m/z 207 [M + H]+ ; 1.24 m n (ret time).
2-fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitrile
Figure imgf000032_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
LC-MS (ESI): m/z 308 [M - H]" ; 1.71 min (ret time).
D31
2-fluoro-4-(4-(hydroxymethyl) nzonitrile
Figure imgf000032_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitriIe.
LC-MS (ESI): m/z 310 [M - H]" ; 1.89 min (ret time).
4-(3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde
Figure imgf000032_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fiuoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
LC-MS (ESI): m/z no [M + H]+ ; 1.79 min (ret time). (4-(3,4-difluorophenoxy)-3-(triflu l
Figure imgf000033_0001
The title com ound was prepared by a procedure similar to that described for D5 starting from 4- (3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde.
LC-MS (ESI): m/z 303 [M - H]* ; 1.78 min (ret time).
D34
tert-butyl 7-((3-cyanobenzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxylate
Figure imgf000033_0002
The title compound was prepared by a procedure similar to that described for El starting from (hydroxymethyl)benzonitrile, sodium hydride and tert-butyl 7-chloro-5-oxo-2,3-dihydroi- midazo[l 52-c]pyrimidine-l (5H)-carboxylate.
LCMS (ESI): m/z 369 [M + H]+ ; 1.66 min (ret time)
D35
3-chloro-4-(3-(trifluoromethyl)phenoxy)benzaIdehyde
Figure imgf000033_0003
The title compound was prepared by a procedure similar to that described for D4 starting chloro-4-fluorobenzaldehyde and 3-(trifluoromethyl)phenol.
LC-MS (ESI): m/z no [M +H]+ ; 1.86 min (ret time).
D36
(3-cliloro-4-(3-(trifluoromethyl)phenoxy)phenyl)methanol
Figure imgf000034_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3- chloro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 285 [M - H20 + H]+ ; 1.75 min (ret time).
D37
tert-butyl 7-((3-cyano-4-(4-cyano-3-fluorophenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimi- dazoll,2-c]pyrimidine-l(5H)-carboxyIate
Figure imgf000034_0002
The title compound was prepared by a procedure similar to that described for El starting from sodium hydride, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluorobenzonitrile and tert-butyl 7- chloro- 5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 504 [M + H]+ ; 1.77 min (ret time). D38
tert-butyl 7-((3-cyano-4-(3-{trifluoromethyI)phenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimi- dazo [1,2-c] pyrimidine- 1 (5H)- carboxylate
Figure imgf000034_0003
The title compound was prepared by a procedure similar to that described for El starting from sodium hydride, 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)benzonitrile and tert-butyl 7- chloro- 5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate)
LC-MS (ESI): m/z 529 [M + H]+ ; 1.61 min (ret time)
D39
3-(4-formyl-2-(trifIuoromethyl)phenoxy)benzonitrile
Figure imgf000035_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3-bydroxybenzonitrile.
LC-MS (ESI): m/z 290 [M - HV ; 1.69 min (ret time).
D4Q
3-(4-(hydroxymethyl)-2-(trifluor e
Figure imgf000035_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 3-
(4-fonnyl-2-(trifluoromethyl)phenoxy)benzonitrile.
LC-MS (ESI): m/z 292 [M - H]' ; 1.69 min (ret time).
D41
tert-butyl 7-((3-cyano-4-(3-(trifluoromethyI)phenoxy)benzyl)oxy)-5-oxo-2,3-dihydroiraida- zo[l,2-c]pyrimidine-l(5H)-carboxyIate
Figure imgf000035_0003
The title compound was prepared by a procedure similar to that described for El starting from sodium hydride and 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)benzonitrile and tert-butyl 7-chloro- 5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate).
LC-MS (ESI): m z 529 [M + H]+ ; 1.61 min (ret time)
D42
2,3-difluoro-5-(4,4,5,5-tetramethyl-l,3s2-dioxaborolan-2-yl)pyridiae
Figure imgf000036_0001
A mixture of of tris(dibenzyIideneacetone)dipalladium(0) (185 mg, 0.200 mmol) and tricyclohexyl phosphine (135 mg, 0.480 mmol), bis (pinacolato)diboron (1.95 g, 7.69mmol), potassium acetate (985 mg, 10.0 mmol) and 5-chloro-2,3-difluoropyridine (1.00 g, 6.69 mmol) in 1 ,4-dioxane solution (30 mL) was bubbled with nitrogen and stirred at 85 °C for 16 h under nitrogen. The reaction mixture was diluted with water was added, filtered and extracted with ethyl acetate. Combined organic portions were washed with saturated saline water, then dried over anhydrous sodium sulfate and concentrated. The crude product (2.8 g) was obtained as orange oil.
LC-MS (ESI): m/z 160 [M - H]"; 0.82 min (ret time).
D43
5,6-difluoropyridin-3-ol
Figure imgf000036_0002
A mixture of hydrogen peroxide water (1.50 mL, 13.2 mmol) and 2,3-difluoro-5-(4,4,5,5-tetrame- thyl-l,3,2-dioxaborolan-2-yl)pyridine (2.8 g) in tetrahydrofuran (15 mL) was stirred at room temperature for 2 h, then diluted with water and extracted with ethyl acetate. Combined organic portions were washed with aqueous 5% sodium thiosulfate solution and saturated saline water, dried over anhydrous sodium sulfate and concentrated. Purification via Biotage Spla HPFC system (C18, mobile phase: 0.01% NH4HCO3, CH3CN/water, 10-95%) afforded the title product as a white solid (450 mg).
LC-MS (ESI): m/z 130 [M - H]" ; 1.12 min (ret time).
2-((5,6-difluoropyridin-3-yl)oxy)-5-formylbenzonitrile
Figure imgf000036_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fhioro-5-formylbenzonitrile and 5, 6-difluoropyridin-3-ol.
LC-MS (ESI): m/z 259 [M - Hp ; 1.60 min (ret time).
D45
2-((5,6-difluoropyridin~3-yI)oxy)-5-(hydroxymethyl)benzonitrile
Figure imgf000037_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 2- ((5, 6-difluoropyridin-3-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 261 [M - H]" ; 1.48 min (ret time).
D46
3,5-difluoro-4-(3-fluorophenoxy)benzaldehyde
Figure imgf000037_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3, 4, 5-trifluorobenzaIdehyde and 3-fluorophenol.
LC-MS (ESI): m/z 253 [M + H] + ; 3.44 min (ret time)
P47
(3,5-difluoro-4~(3-fluorophenoxy)
Figure imgf000037_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3, 5- difluoro-4-(3-fluorophenoxy)benzaldehyde.
LC-MS (ESI): m/z 255 [M + H] + ; 3.02min (ret time)
D48
tert-butyl 7-((3,S-difluoro-4-(4-fluorophenoxy)benzyl)oxy)-S-oxo-2,3-dihydroimidazo[l,2- c] py rimidine- 1 (5H)-car boxylate
Figure imgf000038_0001
The title compound was prepared by a procedure similar to that described for El starting from (3,5-difluoro-4-(4-fluorophenoxy)phenyl)methanolJ NaH and tert-butyl 7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate.
LC-MS (ESI): m/z 490 [M + H]+ ; 1.81 min (ret time).
4-(3,4-difluorophenoxy)-3,5-difluo
Figure imgf000038_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3,4-difluorophenol.
LC-MS (ESI): m/z 271 [M + H] + ; 3.47 min (ret time).
(4-(3,4-difluorophenoxy)-3,5-difluorophenyl)methanol
Figure imgf000038_0003
The title compound was prepared by a procedure similar to that described for D5 starting from (4- (3 ,4-difluorophenoxy)-3 , 5 -difluorophenyl)methanol.
LC-MS (ESI): m/z 273 [M + H] + ; 3.15 min (ret time).
D51
tert-butyl 7-((4-(3~chloro-4-fluorophenoxy)-3-cyanob enzyl) oxy)-5-oxo-2,3-dihy droimida- zo [1 ,2-c]pyrimidine-l (5H)-carboxylate
Figure imgf000038_0004
The title compound was prepared by a procedure similar to that described for El starting from NaH, 2-(3-chIoro-4-fluorophenoxy)-5-(hydroxymethyl)benzonitrile and tert-butyl 7-chloro-5-oxo-2,3- dihydroimidazof 1 ,2-c]pyrimidine- 1 (5H)-carboxylate.
LC-MS (ESI): m/z 513 [M + H]+ ; 1.80 min (ret time)
D52
4-(2-cyano-4-formylphenoxy)-2-(trifluoromethyl)benzonitrile
Figure imgf000039_0001
The title compound was prepared by a procedure similar to that described for D4 startmg from 2 fluoro-5-formylbenzonitrile and 4-hydroxy-2-(trifluoromethyl)-benzonitrile.
LC-MS (ESI): m/z 315 [M - H]" ; 1.65 min (ret time).
D53
4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile
Figure imgf000039_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(2-cyano-4-formylphenoxy)-2-(trifluoromethyl)benzonitrile.
LC-MS (ESI): m/z 317 [M - H]_ ; 1.58 min (ret time). D54
4-(3,4-difluorophenoxy)-3-(trifluo
Figure imgf000039_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
LC-MS (ESI): m/z no [M + H]+ ; 1.79 min (ret time).
D55 (4-(3,4-difluorophenoxy)-3-(trifl
Figure imgf000040_0001
The title compound was prepared by a procedure similar to that described for D5 starting
(3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde.
LC-MS (ESI): m/z 303 [M - H]" ; 1.78 min (ret time).
D56
2-(trifluoromethyl)-4H-pyran-4-one
Figure imgf000040_0002
To a mixture of KO'Bu (729 mg, 6.49 mmol) in diethyl ether (10 mL) at 5 °C were added methyl
2,2,2-trifluoroacetate (767 mg, 5.99 mmol) and (£)-4-methoxybut-3-en-2-one (500 mg, 4.99 mmol). The reaction mixture was stirred at rt for 3h, and quenched with water and then extracted with ether. Combined organic portions were dried over Na2S04, filtered and concentrated. The residue was dissolved in isopropanol (150 mL) and 35% solution of hydrochloric acid (0.5mL) and refluxed for 45 min. Then the solution was concentrated to remove alcohol and fractionated at reduced pressure to get the title product as yellow oil.
LC-MS (ESI): m/z 165 [M + H]+; 1.30 min (ret time).
D57
2-(trifluoromethyl)pyridin-4-ol
Figure imgf000040_0003
To a solution of 2-(trifluoromethyl)-4H-pyran-4-one (350 mg, 2.13 mmol) in MeOH (15 mL) was added ammonium hydroxide (14.8 mL, 107 mmol) at 25 °C. The reaction mixture was stirred at 90 °C for 10 h, then concentrated, diluted with water and extracted with ethyl acetate. Combined organic portions were dried over a2S04, filtered and concentrated. Purification via Biotage Spla HPFC system (CI 8, mobile phase: 0.01% NH4HC03, CH3CN/water, 10-95%, 9.5min, 30mL/min) afforded the title product (280 mg) as a yellow solid.
LC-MS (ESI): m z 164 [M + H]+ ; 1.30 min (ret time). D58
5-formyl-2-((2-(trifluoromethyl)pyridin-4-yI)oxy)benzonitrile
Figure imgf000041_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-(trifluoromethyl)pyridine-4-ol.
LC-MS (ESI): m/z 293 [M + H]+ ; 1.59 min (ret time).
D59
5-(hydroxymethyl)-2-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzonitriIe
Figure imgf000041_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((2-(trifluoromethyl)pyiidin-4-yl)oxy)benzonitrile.
LC-MS (ESI): m/z 294.9 [M + H]+ ; 1.51 min (ret time). D60
4-(2-fluoro-4-formyIphenoxy)-2-(trifluoromethyI)benzonitrile
Figure imgf000041_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 4-hydroxy-2-(trifiuoromethyl)-benzonitrile.
LC-MS (ESI): m z 308 [M - H]" ; 1 ·40 min (ret time)-
D61
4-(2-fluoro-4-(hydroxymethyI)phenoxy)-2-(trifluoromethyl)benzonitriIe
Figure imgf000041_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(2-fluoro^-formylphenoxy)-2-(trifluoromethyl)benzonitrile.
LC-MS (ESI): m/z 310 [M - H]" ; 1.30 min (ret time). D62
4-(2-cyano-4-formylphenoxy)-2-(trifluoromethyl)benzonitrile
Figure imgf000042_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-hydroxy-2-(trifluoromethyl)-benzonitrile.
LC-MS (ESI): m/z 315 [M - H]' ; 1.65 min (ret time).
D63
4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-(triiluoromethyl)benzonitrile
Figure imgf000042_0002
The title compound was prepared by a procedure similar to that described for D5 starting
(2-cyano-4-formylphenoxy)-2-(trifiuoromethyl)benzonitrile.
LC-MS (ESI): m/z 317 [M - H]" ; 1.58 min (ret time).
D64
tert-butyl 7-((3-cyano-4-(4-cyano-3-(trifluoromethyI)phenoxy)benzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxyIate
Figure imgf000042_0003
The title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 554 [M + H]+ ; 1.72 min (ret time). D65
tert-butyl 7-((4-(4-chloro-3-(trifluororaethyl)phenoxy)ben2yl)oxy)-5-oxo-2,3 dihydroimi- dazo[l,2-c]pyrimidine-l(5H)-carboxylate
Figure imgf000043_0001
The title compound was prepared by a procedure similar to that described for El starting from (4- (4-chloro-3-(trifluoromethyl)phenoxy)phenyl)methanol, NaH and tert-butyl-7-chloro-5-oxo-2,3- dihydroimidazo [ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate .
LC-MS (ESI): m/z 538 [M + H]+ ; 1.91 min (ret time).
Figure imgf000043_0002
The title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluoroben2onitrile and tert-butyl 7-chloro- 5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxyIate.
LC-MS (ESI): m/z 504 [M + H]+ ; 1.77 min (ret time).
D67
tert-butyl 7-((3-cyano-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzyI)oxy)-5-oxo-2,3- dihydr oimidazo [ 1 ,2-c] pyrimid -carboxyIate
Figure imgf000043_0003
The title compound was prepared by a procedure similar to that described for El starting from NaH, 5-(hydroxymethyl)-2-((2-(trifluoromethyI)pyridin-4-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 530 [M + H]+ ; 1.73 min (ret time). D68
l-methoxy-3-nitro-5-(trifluoromethyI)b
Figure imgf000044_0001
To a solution of 1 , _-dinitro-5-(trifluoromethyl)benzene (10 g, 42.4 mmol) in absolute methanol (100 mL) was added sodium methanolate (3.43 g, 63.5 mmol) in absolute methanol (20 mL). The red alcoholic solution was refluxed for 1 h, then concentrated to remove solvent, diluted with ethyl acetate (80 mL) and water (30 mL). Separated organic part was dried over Na2S04, filtered and concentrated to get the title product (8.5 g) as a red solid
LC-MS (ESI): m/z no [M + H]+ ; 1.85 min (ret time).
D69
3 -methoxy-5-(trifluoroiTi ethyl)aniline
Figure imgf000044_0002
A mixture of l-methoxy-3-nitro-5-(trifluoromethyl)benzene (8.50 g, 38.4 mmol) and 10%Pd/C (2.00 g, 1.88 mmol) in methanol (40 mL) was stirred under hydrogen baloon at rt for 24 h, and filtered through a pad of celite and concentrated to give the title product (7.2 g) as an orange solid LC-MS (ESI): m/z 1 2 [M + H]+ ; 1.56 min (ret time).
D70
l-iodo-3-methoxy-5-(trifluoromethyl)b
Figure imgf000044_0003
To a solution of 3-methoxy-5-(trifluoromethyl)aniline (2.50 g, 13.1 mmol) in THF (20 mL) was added a solution of concentrated HCl (36% to 38%) in ¾0 (1 : 1 v/v, 11 mL). The reaction mixture was stirred at rt for 1 h, and then cooled to 0 °C. A cooled solution of sodium nitrite (2.26 g, 32.7 mmol) in H20 (34 ml) and THF (39 ml) was added. The reaction mixture was then gradually allowed to warm to room temperature and stirred overnight, quenched with saturated aqueous Na2CC>3 solution, and concentrated to remove the solvents and extracted with DCM. Combined organic portions were washed with brine, dried over Na2S04, filtered and concentrated. Purification by Biotage system (eluent: Hexane) afforded the title product (2.23 g) as a colorless oil
LC-MS (ESI): m/z no [M + H]+ ; 1.88 min (ret time). D71
3-m ethoxy-5-(trifluoromethyl) benzon
Figure imgf000045_0001
To a solution of l-iodo-3-methoxy-5-(trifluoromethyl)benzene (2.23 g, 7.38 mmol) in N,N- dimethylformamide (DMF) (20 mL) was added CuCN. The reaction mixture was stirred at 100 °C for 24 h, and then poured into aq. NH3 (100 mL) and extracted with ethyl acetate (100 mL).
Separated organic portions were washed with brine (100 mL), dried over Na2S0 , filtered and concentrated. Purification via flash chromatography (ethylacetate/hexanes: 5% to 80%) afforded the title product (1.3 g).
LC-MS (ESI): m/z no [M +H]+ ; 1.68 min (ret time).
D72
3-hydroxy-5-(trifluor om ethyl) benzonitrile
Figure imgf000045_0002
To a solution of 3-methoxy-5-(trifluoromethyl)benzonitrile (1.30 g, 6.46 mmol) in dry
dichloromethane (30 mL) was added BBr3 (0.0920 mL, 0.969 mmol) at 0°C. The reaction mixture was stirred at rt for two days, quenched with 10% sodium bicarbonate (50 mL) and extracted with DCM (2 X 200 mL). Combined organic portions were dried over anhydrous sodium sulphate and concentrated to afford the title product (1.1 g).
LC-MS (ESI): m/z 186 [M - H]" ; 1.55 min (ret time).
D73
3-(4-formyl-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile
Figure imgf000045_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3 hydroxy-5 -(trifluoromethyl)benzonitrile and 4-fluoro-3 -(trifluoromethyl)benzaldehyde.
LC-MS (ESI): m/z 358 [M - H]' ; 1.87 min (ret time). D74
3-(4-(hydroxymethyI)-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyI)benzonitrile
Figure imgf000046_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3- (4-formyl-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile.
LC-MS (ESI): m/z 360 [M - H]" ; 1.80 min (ret time).
D75
tert-butyl 7-((3-cyano-4-((6-(trifluoromethyl)pyridiii-3-yl)oxy)benzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate
Figure imgf000046_0002
The title compound was prepared by a procedure similar to that described for El starting from NaH, 5-(hydroxymethyl)-2-((6-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 530 [M + H]+ ; 1.84 min (ret time)
D76
3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yI)oxy)benzaldehyde
Figure imgf000046_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-(trifluoromethyl)pyridin-4-ol.
LC-MS (ESI): m/z 286 [M + H]+ ; 1.65 min (ret time). D77
(3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)phenyl)methanol
Figure imgf000047_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzaldehyde.
LC-MS (ESI): m/z 288 [M + H]+ ; 1.62 min (ret time).
4-(2-cyano-4-formylphenoxy)-2-fluorobenzonitrile
Figure imgf000047_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylberLzonitrile and 2-fluoro-4- hydroxybenzonitrile.
LC-MS (ESI): m/z 265 [M - H]~ ; 1.61 min (ret time).
D79
4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluorobenzonitrile
Figure imgf000047_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(2-cyano-4-formylphenoxy)-2-fluorobenzonitrile.
LC-MS (ESI): m z [M ] ; min (ret time).
5-formyI-2-(pyrimiditt-5-yloxy)be
Figure imgf000047_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and pyrimidin-5-ol.
LC-MS (ESI): m/z 226 [M + H] + ; 1.87 min (ret time) D81
5-(hydroxymethyl)-2-(pyrimidin-5
Figure imgf000048_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-( yrirnidin-5-yloxy)benzonitrile.
LC-MS (ESI): m/z 228 [M - H20 + H] + ; 1.38 min (ret time)
D82
2-(4-chloro-3-(trifluoromethyI)p e
Figure imgf000048_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-chloro-3-(trifluoromethyl)phenol.
LC-MS (ESI): m/z 326 [M + H] + ; 3.55 min (ret time)
D83
2-(4-chloro-3-(trifluoromethyl) nzonitrile
Figure imgf000048_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
(4-chloro-3-(trifluoromethyl)phenoxy)-5-formyIbenzonitrile.
LC-MS (ESI): m/z 328 [M + H] + ; 3.27 min (ret time)
D84
tert-butyl7-((4-(4-chIoro-3-(trifluoromethyl)phenoxy)-3-cyanobenzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxyIate
Figure imgf000049_0001
The title compound was prepared by a procedure similar to that described for El starting from 2- (4-chloro-3-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile, NaH and tert-butyl 7- chloro-5-oxo-2,3-dihydroimidazo[l 32-c]pyrimidine-l(5H)-carboxylate.
LC-MS (ESI): m/z 563 [M + H]+ ; 1.83 min (ret time).
D85
3-(4-formyl-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile
Figure imgf000049_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3 hydroxy-5-(trifluoromethyl)benzonitrile and 4-fluoro-3-(trifluoromethyl)benzaldehyde.
LC-MS (ESI): m/z 358 [M - H]" ; 1.87 min (ret time).
D86
3-(4-(hydroxymethyl)-2-(trifluoromethyI)phenoxy)-5-(trifluoromethyI)benzonitriIe
Figure imgf000049_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3-
(4-fonnyl-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile.
LC-MS (ESI): m/z 360 [M - ΗΓ ; 1.80 min (ret time).
D87
tert-butyl 7-((4-(3,4-dichIorop henoxy)-3 -fluorob enzyl)oxy)-5-oxo-2,3-dihy droimidazo [1,2- c] pyrimidine-1 (5H)-c arboxylate
Figure imgf000049_0004
The title compound was prepared by a procedure similar to that described for El starting from NaH, (4-(3,4-dichlorophenoxy)-3-fluorophenyl)methanol and tert-butyl 7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l (5H)-carboxyIate.
LC-MS (ESI): m z NO MSD ; 1.98 min (ret time)
D88
tert-butyl 7-((3-cyano-4-(3-(trifluoromethyl)phenoxy)benzyl)oxy)-5-oxo-2,3-diliydroiini- dazo [1 ,2-c] pyrimidine-1 (5H)- carboxy late
Figure imgf000050_0001
The title compound was prepared by a procedure similar to that described for El starting from sodium hydride, 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)benzonitriIe and tert-butyl 7- chloro-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 529.1 [M + H]+ ; 1.61 min (ret time) D89
3-chloro-4-(3,4-difluorophenoxy)b
Figure imgf000050_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3- chloro-4-fluorobenzaldehyde and 3,4-difluorophenol.
LC-MS (ESI): No MSD; 1.772min (ret time)
D90
(3-chIoro-4-(3,4-difluorophenoxy)phenyl)methanoI
The title compound was prepared by a H° prxocedureC simialar to th;at described for D5 starting from 3- chloro-4-(3,4-difluorophenoxy)benzaldehyde.
LC-MS (ESI): 269 [M + H ; 1.66 min (ret time)
D91
tert-butyl 7-((3-chIoro-4-(3,4-difIuorophenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo-[l,2- c] py rimidine- 1 (5H)-carboxylate
Figure imgf000051_0001
The title compound was prepared by a procedure similar to that described for El starting from sodium hydride, (3-chloro-4-(3,4-difluorophenoxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3 -dihydroimidazo [ 1 }2-c]pyrimidine- 1 (5H)-carboxylate.
LC-MS (ESI): 450 [M + H]+ ; 1.89 min (ret time)
D92
2-chIoro-5-(2-cyano-4-formylphenoxy)benzonitriIe
Figure imgf000051_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formyIbenzonitrile and 2-chloro-5-hydroxybenzonitrile.
LC-MS (ESI): m/z 281 [M - RJ ; 1.67 min (ret time).
2-chloro-5-(2-cyano-4-(hydroxy
Figure imgf000051_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- chIoro-5-(2-cyano-4-formylphenoxy)benzonitrile.
LC-MS (ESI): m/z 283 [M - H]~ ; 1.60 min (ret time).
5-formyl-2-((5-(trifluoromet ile
Figure imgf000051_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 5- (trifluoromethyl)pyridin-3-ol and 2-fluoro-5-formylbenzonitriIe.
LC-MS (ESI): m/z 293 [M - H]- ; 1.64 min (ret time)
D95 5-(hydroxymethyl)-2-((5-(trifluor enzonitrile
Figure imgf000052_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 5- fonnyl-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile.
LC-MS (ESI): m/z 293.0[M -H] ; 1.230min (ret time)
2-(3-fluoro-5-(trifluoromethyI)phenoxy)-5-formylbenzonitrile
Figure imgf000052_0002
The title compound was prepared by a procedure similar to that described for D4 starting fluoro-5-(trifluoromethyl)phenol and 2-fluoro-5-formylbenzonitrile.
LC-MS (ESI): m/z 308 [M - H]" ; 1.78 min (ret time).
2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(hydroxymethyI)benzonitrile
Figure imgf000052_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (3 -fluoro-5 -(trifluoromethyl)phenoxy) -5-formylbenzonitrile.
LC-MS (ESI): m/z 294 [M - H20 + H]+ ; 1.71 min (ret time).
D98
tert-butyl 7-((3-cyano-4-((5,6-difluoropyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroimid- azo [ 1 ,2-c] pyrimidine- 1 (5H)-carboxyIate
Figure imgf000052_0004
The title compound was prepared by a procedure similar to that described for El starting from 2- ((5,6-difluoropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile, NaH and tert-butyl 7-chloro-5-oxo- 2,3 -dihydroimidazo[ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate.
LC-MS (ESI): m/z 498 [M + H]+ ; 1.74 min (ret time).
D99
tert-butyl 7-((4-(4-cyano-3-(trifluoromethyl)phenoxy)-3-fluorobenzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate
Figure imgf000053_0001
The title compound was prepared by a procedure similar to that described for El starting from NaH, 4-(2-fluoro-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile and tert-butyl 7-cliloro-5- oxo-2,3 -dihydroimidazo [ 1 ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 547 [M + H]+ ; 1.68 min (ret time).
D100
3-fluoro-4-((2-(trifluoromethyI)pyridin-4- enz hyde
Figure imgf000053_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4· difluorobenzaldehyde and 2-(trifluoromethyl)pyridin-4-ol.
LC-MS (ESI): m/z 286 [M + H]+ ; 1.65 min (ret time).
D101
(3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)phenyl)methanol
Figure imgf000053_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzaldehyde.
LC-MS (ESI): m z 288 [M + H]+ ; 1.62 min (ret time). D1Q2
tert-butyl 7-((3-fluoro-4-((2-(trifluoromethyI)pyridin-4-yl)oxy)benzyI)oxy)-5- dihydroimidazo[l,2-c]pyriniidine-l(5H)-carboxyIate
Figure imgf000054_0001
The title compound was prepared by a procedure similar to that described for El starting from NaH, (3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3-dihydroimidazo[l :2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 523 [M + H]+ ; 1.81 min (ret time).
D103
tert-butyl 7-((3-cyano-4-(3-fluoro-S-(trifluoromethyI)phenoxy)benzyl)oxy)-5-oxo-2,3- dihy droimidazo [ 1 ,2- c] pyrimidine- 1 (5H)-carboxylate
Figure imgf000054_0002
The title compound was prepared by a procedure similar to that described for El starting from NaH, 2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 547 [M + H]+ ; 1.55 min (ret time).
D104
6-(3-chloro-5-(trifluororaethyl)phenoxy)nicotinaldehyde
Figure imgf000054_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 6- fluoronicotinaldehyde and 3-chloro-5-(trifluoromethyl) phenol.
LC-MS (ESI): m z 302 [M + H]+ ; 1.83 min (ret time).
D105 (6-(3-chloro-5-(trifluoromethyl) ol
Figure imgf000055_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 6- (3 -chloro-5 -(trifluoromethyl)phenoxy)nicotinaldehyde.
LC-MS (ESI): m/z 302 [M - H]" ; 1.71 min (ret time).
D106
2-chloro-4-(2-cyano-4-formylphenoxy)benzonitrile
Figure imgf000055_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-chloro-4-hydroxybenzonitrile.
LC-MS (ESI): m/z 283 [M + H] + ; 3.07 min (ret time)
D107
2-chloro-4-(2-cyano-4-(hydro
Figure imgf000055_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- chloro-4-(2-cyano-4-formylphenoxy)benzonitrile.
LC-MS (ESI): m/z 285 [M + H] + ; 2.79 min (ret time)
P108
2-chloro-4-(2-fluoro-4-formylphenoxy)benzonitrile
Figure imgf000055_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-chloro-4-hydroxybenzonitrile.
LC-MS (ESI): m z 274 [M + H]+ ; 1.72 min (ret time).
D109 2-chloro-4-(2-fluoro-4-(hydroxymethyI)phenoxy)benzonitrile
Figure imgf000056_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 2- chloro-4-(2-fluoro-4-formyIphenoxy)benzonitrile.
LC-MS (ESI): m/z 276 [M + H]+ ; 1.64 min (ret time).
P110
tert-butyl 7-((3-fluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxy]ate
Figure imgf000056_0002
The title compound was prepared by a procedure similar to that described for El starting from NaH, (3-fluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)phenyl)methanol and tert-butyl 7-chloro-5-oxo- 2,3-dihydroimidazo [ 1 ,2-c]pyrimidine- 1 (5H)-carboxylate.
LC-MS (ESI): m/z 523 [M + H]' ; 1.78 min (ret time)
methyl 5-bromo-6-(3-(trifluoromethyl)phenoxy)nicotinate
Figure imgf000056_0003
The title compound was prepared by a procedure similar to that described for D4 starting from methyl 5-bromo-6-chloronicotinate and3-(trifluoromethyl)phenol.
LC-MS (ESI): m/z no [M+H]+ ; 1.59 min (ret time).
D112
S-bromo-6-(3-(trifiuoromethyl)phenoxy)nicotinic acid
Figure imgf000057_0001
To a solution of methyl 5-bromo-6-(3-(trifluoromethyl)phenoxy)nicotinate (610 mg, 1.62 mmol) in methanol (4.00 mL), tetrahydrofuran (THF) (4 mL) and water (2.000 mL) was added LiOH (1 17 mg, 4.87 mmol) at rt. The reaction mixture was stirred at rt for 3h, quenched with HC1 and concentrated. Purification via ISCO system (ethyl acetate/petroleum ether = 1/10) afforded the title product (600 mg).
LC-MS (ESI): m/z 362 [M - H]" ; l .Olmin (ret time).
D113
(5-bromo-6-(3-(trifluoromethyl)phenoxy)pyridin-3-yl)methanol
Figure imgf000057_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 5- bromo-6-(3-(trifluoromethyl)phenoxy)nicotinic acid.
LC-MS (ESI): m z 348 [M - H]" ; 1.37 min (ret time).
D114
5-(hydroxymethyl)-2-(3-(trifluoromethyI)phenoxy)nicotinonitrile
Figure imgf000057_0003
To a solution of (5-bromo-6-(3-(trifluoromethyl)phenoxy)pyridin-3-yl)methanol (530mg, 1.522 mmol) in N-methyl-2-pyrrolidone (NMP) (5 mL) was added copper(I) cyanide (545 mg, 6.09 mmol). The reaction mixture was stirred at 150 °C for 24 h, then poured into aq. NH3 (100 mL) and extracted with ethyl acetate (100 mL). Separated organic part was washed with brine (100 mL), dried over Na2S04, filtered and concentrated. Purification via flash chromatography with (EtOAc/hexanes: 5% to 80%) afforded the title product (480 mg). LC-MS (ESI): m/z 293 [M - H]~; 1.26 min (ret time).
D115
tert-butyl 7-((5-cyano-6-(3-(trifluoromethyl)phenoxy)pyridin-3-yl)methoxy)-5-oxo-2)3- dihy droimidazo [1 ,2-c] pyrimidine- 1 (5H)-carboxylate
Figure imgf000058_0001
The title compound was prepared by a procedure similar to that described for El starting from NaH, 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)nicotinonitrile and tert-butyl 7-chloro-5-oxo- 2,3-dihydroimidazo-[l ,2-c]pyrirmdme-l(5H)-carboxylate^
LC-MS (ESI): m/z 530 [M + H]+ ; 1.46 min (ret time).
D116
2-fluoro-4-(2-fluoro-4-formylphe
Figure imgf000058_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
LC-MS (ESI): m/z 260 [M + H]+ ; 0.86 min (ret time).
D117
2-fluoro-4-(2-fluoro-4-(hydroxy
Figure imgf000058_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(2-fluoro-4-formylphenoxy)benzonitrile.
LC-MS (ESI): m/z 256 [M + H]+ ; 1.22 min (ret time).
D118
2- ((5-fluor opyridin-3-yl) oxy)-5-fo
Figure imgf000058_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 5-fluoropyridin-3-ol.
LC-MS (ESI): m z 241 [M - H]" ; 1.12 min (ret time). D119
2- ((5-fIuoropyridin-3-yl) oxy)-5-
Figure imgf000059_0001
The title compound was prepared by a procedure similar to that described for D5 starting
((5-fluoropyridin-3-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 243 [M - H] ; 1.02 min (ret time).
D120
2-((5-bromopyridin-3-yl)oxy)-5
Figure imgf000059_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 5-bromopyridin-3-ol.
LC-MS (ESI): m/z 303 [M + H]+ ; 1.21 min (ret time).
D121
2-((5-bromopyridin-3-yI)oxy)-5-
Figure imgf000059_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
((5-bromopyridin-3-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 305 [M - H]* ; 1.12min (ret time).
5-(2-cyano-4-(hydroxymethyl)p
Figure imgf000059_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 2- ((5-bromopyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile and copper(I) cyanide.
LC-MS (ESI): m/z 250 [M - H]" ; l .OSmin (ret time).
D123
2-((5-chloropyridin-3-yl)oxy)-5
Figure imgf000060_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 5-chloropyridin-3-ol.
LC-MS (ESI): m/z 259 [M + H]+ ; 077 min (ret time).
D124
2-((5-chloropyridin-3-yl)oxy)-5-(hydroxymethyl)beDzonitrile
Figure imgf000060_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
((5-chloropyridin-3-yl)oxy)-5-formylbenzonitriIe.
LC-MS (ESI): m/z 259 [M - HV ; 1.09 min (ret time).
D125
2-fluoro-5-(2-fluoro-4-formylphe
Figure imgf000060_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde (188 mg, 1.32 mmol) and 2-fluoro-5-hydroxybenzonitrile.
LC-MS (ESI): m z 258 [M - H]"; 1.32 min (ret time).
D126
2-fluoro-5-(2-fluoro-4-(hydroxymethyl)phenoxy)benzonitriIe
Figure imgf000060_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-5-(2-fluoro-4-formylphenoxy)benzonitrile. LC-MS (ESI): m/z 260 [M - H]; 1.23 min (ret time).
P127
7-((3-chlorO"4,5-difluorobenzyl)oxy)-l-methyl-2,3^
Figure imgf000061_0001
A mixture of 3-chloro-4,5-difluorobenzoic acid (0.75 g, 3.9 mmol) and di(lH-imidazol-l- yl)methanone (CDI) (0.695 g, 4.28 mmol) in tetrahydrofuran (THF) (10 mL) was stirred under nitrogen at room temperature for lh, and then a solution of NaBRf (0.221 g, 5.84 mmol) in water (2.0 mL) was added dropwise. The reaction mixture was stirred at 10 °C for 16 h, and adjusted to pH = 1 with 1 N HC1 solution, concentrated to remove solvent and extracted with ethyl acetate. Separated organic part was washed with a solution of NaHC03 and concentrated. Purification via preparative TLC afforded the title product (0.41 g).
LC-MS (ESI): m/z 179 [M + H]+; 1.10 min (ret time).
P128
S-fluoro-S-iiil-methyl-S-oxo-ljZ^jS-tetrahydroimidazoElj -clpyrimidiii
yl)oxy)methyl)benzonitriIe
Figure imgf000061_0002
To a solution of 3-cyano-5-fluorobenzoic acid (1.00 g, 6.06 mmol) in tetrahydrofuran (THF) (20 mL) was added di(lH-imidazol-l-yl)methanone (1.08 g, 6.66 mmol). The reaction mixture was stirred at 20 °C for 1 h. Then a suspension of NaBBU (0.687 g, 18.2 mmol) in water (5 mL) was added dropwise. The reaction mixture was stirred at 20 °C for 20 h, quenched with saturated aqueous NH CI and extracted with ethyl acetate (20 mLX 3). Combined organic portions were washed with saturated aqueous NaHC03 (20 mL), brine (20 mL), dried over Na2S04 and concentrated in vacuo to get the desired product as a white solid.
HNMR (400 MHz, CDC13): δ 4.697 (m, 2 H) & 7.104-7.400 (m, 3H).
P129
4-(2,6-difluor o-4-(((l-m ethy I-5-oxo- 1 ,2,3 ,5-tetrahy dr oimidazo [ 1 ,2-c] pyrimidin-7-yl)oxy)m- ethyl)phenoxy)-2-(trifIuoromethyI)benzonitriIe
Figure imgf000062_0001
The title compound was prepared by a procedure similar to that described for DS starting from
3,4,5-trifluorobenzaldehyde and 4-hydroxy-2-(trifluoromethyl)benzonitrile.
LC-MS (ESI): m/z 330 [M + H] + ; 1.196 min (ret time).
D130
4-((5-(trifluoromethyl)pyridin-3
Figure imgf000062_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 4-fluorobenzaldehyde and 5-(trifluoromethyl)pyridin-3-ol
D131
l-methyl-7-((4-((5-(trifluoromethyl)pyridin-3-yl)oxy)berizyl)oxy)-2,3-dihydroimida20[l,2- c] pyrimidin-5(lH)-one
Figure imgf000062_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 4- fluorobenzaldehyde and 5-(trifluoromethyl)pyridin-3-ol.
LC-MS (ESI): m/z 270 [M + H] + ; 1.08 min (ret time).
D132
7-((3,5-difluoro-4-((5-(trifIuoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-l-methyl-2,3- dihydroimi dazo [ 1 ,2-c] pyrimi din-5(l H)-one
Figure imgf000062_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 5- (trifluoromethyl)pyridin-3-ol and 3,4,5-trifiuorobenza-ldehyde.
LC-MS (ESI): m/z 303 [M + H]+; 1.218 (ret time). D133
(3,5-diiluoro-4-((S-(trifluoromethyl)pyridin-3-yI)oxy)phenyl)methanol
Figure imgf000063_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3,5- difluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzaIdehyde.
LC-MS (ESI): m/z 306 [M + H]+; 0.93 (ret time).
D134
4-(2-fluor 0-4- (((l-methyl-5-oxo-l ,2,3,5-tetr ahydroimidazo [ 1 ,2-c] pyrimidin-7-yl)oxy)methy- I)phenoxy)-2-methylbenzonitrile
Figure imgf000063_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 3,4- difluorobenzaldehyde and 4-hydroxy-2-methylbenzonitrile.
LC-MS (ESI): m/z 258 [M + H] + ; 1.13 min (ret time).
D135
7-((3-fluoro-4-(3-fluoro-5-(trifluoromethyl)phenoxy)benzyl)oxy)-2,3-dihydroimidazo[l,2- c] pyri midin-5(l H)-one
Figure imgf000063_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3,4- fluorobenzaldehyde and 3-fluoro-5-(trifluoromethyl)phenol.
LC-MS (ESI): m/z 287 [M - H20 + H ] + ; 1.25 min (ret time).
D136
5-formyl-2-((6-(trifluoromethyI)pyridin-3-yI)oxy)benzonitrile
Figure imgf000063_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 6-(trifluoromethyl)pyridin-3-ol
LC-MS (ESI): m/z 293 [M + H]+ ; 1.62 min (ret time). D137
5-(hydroxymethyl)-2-((6-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile
Figure imgf000064_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((6-(trifluoromethyI)pyridin-3-yl)oxy)benzonitrile.
LC-MS (ESI) : m/z 295 [M + H]+ ; 1.53 min (ret time) .
D138
2-fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitrile
Figure imgf000064_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3 -(trifluoromethyl)benzaldehyde and 2-fluoro-4-hydroxybenzonitrile.
LC-MS (ESI): m/z 308 [M - H]" ; 1.71 min (ret time).
D139
2-fluoro-4-(4-(hydroxymethyl)-2-(trifluoromethyl)phenoxy)benzonitrile
Figure imgf000064_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- fluoro-4-(4-formyl-2-(trifluoromethyl)phenoxy)benzonitrile.
LC-MS (ESI): m/z 310 [M - H]" ; 1.89 min (ret time).
D140
4-(3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde
Figure imgf000065_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluoro-3-(trifluoromethyl)benzaldehyde and 3,4-difluorophenol.
LC-MS (ESI): m/z no [M + H]+ ; 1.79 min (ret time).
D141
(4-(3,4-difluorophenoxy)-3-(trifluoromethyI)phenyI)methanol
Figure imgf000065_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 4- (3,4-difluorophenoxy)-3-(trifluoromethyl)benzaldehyde.
LC-MS (ESI): m/z 303 [M - H]- ; 1.78 min (ret time).
D142
tert-butyl 7-((4-(3-cyanophenoxy)-3-(trifluoromethyl)benzyI)oxy)-5-oxo-2,3- dihydroimidazo [l,2-c]pyrimidine-l(5H)-carboxylate
Figure imgf000065_0003
The title compound was prepared by a procedure similar to that described for El starting from NaH, 3-(4-(hydroxymethyl)-2-(trifluoromethyl)phenoxy)benzonitrile and tert-butyl-7-chloro-5-oxo-2,3- dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate.
LC-MS (ESI): m/z 529 [M + Hf ; 1.81 min (ret time).
D143
5-formyl-2-((5-(trifluoromethyI)
Figure imgf000065_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 5- (trifluoromethyl)pyridin-3-ol and 2-fluoro-5-formylbenzonitrile.
LC-MS (ESI): m/z 293 [M + H]+ ; 1.64 min (ret time). D144
5-(hydroxymethyI)-2-((5-(triflu n2onitriIe
Figure imgf000066_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile.
LC-MS (ESI): m z 293 [M - H]~ ; 1.23 min (ret time).
D145
tert-butyl 7-((3-cyano-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3- dihydroimidazo[l,2-c]pyri
Figure imgf000066_0002
The title compound was prepared by a procedure similar to that described for El starting from 5- (hydroxymethyl)-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile and tert-butyl 7-chloro-5- oxo-2,3-dihydroirnidazo[l ,2-c]pyrimidine-l (5H)-carboxylate.
LC-MS (ESI): m/z 530 [M+H]+ ; 1.74 min (ret time).
D146
4-((5-bromopyridin-3-yI)oxy)-3-fl
Figure imgf000066_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 5-bromopyridin-3-ol.
LC-MS (ESI): m/z 298 [M + H]+ ; 1.3 lmin (ret time).
D147
(4-((5-bromopyridin-3-yl)oxy)-3-fluorophenyl)methanoI
Figure imgf000067_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4- ((5-bromopyridin-3 -yl)oxy)-3 -f iorobenzaldehyde.
LC-MS (ESI): m/z 296 [M + H]+ ; 1.19 min (ret time).
D148
5-(2-fluoro-4-(hydroxymethyl)
Figure imgf000067_0002
The title compound was prepared by a procedure similar to that described for D5 starting from (4- ((5-bromopyridin-3-yl)oxy)-3-fluorophenyl)methanoI.
LC-MS (ESI): m/z 243 [M + H]÷ ; 1.06 min (ret time).
D149
4-(3-chloro-4-fluorophenoxy)-3
Figure imgf000067_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3- chloro-4-fluorophenol and 3,4-difluorobenzaldehyde.
LC-MS (ESI): m/z 269 [M+ H]+; 3.60 min (ret time). D150
(4-(3-chloro-4-fluorophenoxy)-3
Figure imgf000067_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 4- (3 -chloro-4-fluorophenoxy)-3 -fluorobenzaldehyde.
LC-MS (ESI): m/z 271 [M+ H]+; 3.20 min (ret time).
D151
4-(3-chlorophenoxy)-3-fluorobenz
Figure imgf000067_0005
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-chlorophenol.
LC-MS (ESI): m/z 251 [M+ H]+; 3.58 min (ret time). D152
(4-(3-chlorophenoxy)-3-fluorophenyl)methanoI.
Figure imgf000068_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(3-chlorophenoxy)-3-fluorobenzaldehyde.
LC-MS (ESI): m/z 253 [M+ H]+; 3.24 min (ret time).
D153
4-(3-chIoro-4-fluorophenoxy)be
Figure imgf000068_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and 3-chloro-4-fluorophenol.
LC-MS (ESI): m/z 251 [M+ H]+; 3.58 min (ret time).
D154
(4-(3-chloro-4-fluorophenoxy)ph
Figure imgf000068_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(3-chloro-4-fluorophenoxy)benzaldehyde.
LC-MS (ESI): m z 253 [M+ H]+; 3.20 min (ret time).
D155
3-fluoro-4-(3-fluorophenoxy)benzaldehyde
Figure imgf000068_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-fluorophenol.
LC-MS (ESI): m/z 235 [M+ H]+; 3.37 min (ret time). D156
(3-fluoro-4-(3-fIuorophcnoxy)phe
Figure imgf000069_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-(3-fluorophenoxy)benzaldehyde.
LC-MS (ESI): m/z 219 [M+ H]+; 2.99 min (ret time).
5-formyI-2-(4-(trifluoromethyl)p
Figure imgf000069_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-(trifluoromethyl)phenol.
LC-MS (ESI): m/z 292 [M+ H]+; 3.41 min (ret time). P158
5-(hydroxymethyl)-2-(4-(trifluo e.
Figure imgf000069_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 5- (hydroxymethyl)-2-(4-(trifluoromethyl)phenoxy)benzonitrile.
LC-MS (ESI): m z 294 [M+ H]+; 3.13 min (ret time).
D159
2-(4-fluorophenoxy)-5-formylbenzonitrile.
Figure imgf000070_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 4-fluorophenol.
LC-MS (ESI): m/z 242 [M+ H]÷; 3.12 min (ret time).
D160
2-(4-fluorophenoxy)-5-(hydro
Figure imgf000070_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (4-fluorophenoxy)-5-(hydroxymethyl)benzonitrile.
LC-MS (ESI): m/z 244 [M+ H]+; 2.80 min (ret time).
4-{ [4-chIoro-3-(trifluoromethyl)phenyl] oxy}benzaldehyde
Figure imgf000070_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and 4-chloro-3-(trifluoromethyi)phenol.
LC-MS (ESI): m/z 301 [M + H] +; 3.76 min (ret time). D162
4-chloro-3-(trifluoromethyI)phen -ethenyIphenyl ether
Figure imgf000070_0004
To a suspension of methyl(triphenyl)phosphonium bromide (5.56 g, 15.57 mmol) in anhydrous tetrahydrofuran (THF) (50 mL) was added BuLi (9.5 ml, 15.20 mmol) dropwise at 0 °C. The reaction mixture was turned to clear and stirred for 15 min at 0 °C, then a solution of -{[4-chloro-3- (trifluoromethyl)phenyl]oxy}benzaldehyde (4.07 g, 13.54 mmol) in THF (10 mL) was added. The reaction mixture was warmed to rt and stirred for 1 h, quenched by sat. NH4CI, and then concentrated. The residue was dissolved in ethyl acetate (100 mL), washed with water, and brine, dried over anhydrous sodium sulfate, concentrated. Purification via ISCO afforded the title compound (3.0 g).
LC-MS (ESI): m/z 299 [M - H] + ; 5.07min (ret time).
2- (4- { [4-chloro-3-(trifluoromethyl)phenyl] oxy}phenyl)ethanol
Figure imgf000071_0001
A mixture of l-chloro-4-[(4-ethenylphenyl)oxy]-2-(trifluoromethyl)benzene (3.8 g, 12.72 mmol) in anhydous tetrahydrofuran (50 mL) was added 9-BBN (50.9 mL, 25.4 mmol) dropwise at 0 °C. The reaction mixture was stirred at rt overnight, then sodium hydroxide (42.4 mL, 127 mmol) and H2O2 (2.60 mL, 25.4 mmol) were added at 0 °C. The reaction mixture was stirred for 2 h at 50 °C, quenched with aq. Na2SC>3 and concentrated. Purification via mass-directed autopreparation afforded the title compound (2.0 g).
LC-MS (ESI): m/z 317 [M + H] + ; 3.56 min (ret time).
D164
3-fluoro-4-((6-(trifluoromethyI)pyridin-2-yl)oxy)benzaldehyde
Figure imgf000071_0002
The title compound was prepared by a procedure similar to that described for D4 starting fluoro-4-hydroxybenzaldehyde and 2-chloro-6-(trifluoromethyl)pyridine.
LC-MS (ESI): m/z 286 [M + H] +; 3.34 min (ret time).
D1 5
(3-fluoro-4-((6-(trifluoromethyl)pyridin-2-yl)oxy)phenyI)methanol
Figure imgf000071_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-((6-(trifluoi methyl)pyridin-2-yl)oxy)benzaldehyde.
LC-MS (ESI): m/z 288 [M + H] +; 2.98min (ret time) D166
2-(3-fluorophenoxy)-5-formylbe
Figure imgf000072_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-fluorophenol.
LC-MS (ESI): m/z 242 [M + H] + ; 3.11 min (ret time).
D167
2-(3-fluorophenoxy)-5-(hydroxyImethyI)benzonitrile
Figure imgf000072_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
(3 -fluorophenoxy)-5 -formylbenzonitrile.
LC-MS (ESI): m/z 244 [M + H] + ; 2.79 min (ret time).
D168
2-(4-chIoro-3-fluorophenoxy)-5-
Figure imgf000072_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5 -formylbenzonitrile and 4-chloro-3-fluorophenol.
LC-MS (ESI): m/z 276 [M + H] + ; 3.33 min (ret time)
D169
2-(4-chloro-3-fluorophenoxy)-5-(hydroxymethyl) benzonitrile
Figure imgf000072_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
(3-chloro-4-fluorophenoxy)-5-formylbenzonitriIe.
LC-MS (ESI): m/z 278 [M + H] + ; 3.02min (ret time) P170
4-(3,4-difluorophenoxy)benzaldehyde
Figure imgf000073_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorophenol and 4-fmorobenzaldehyde.
LC-MS (ESI): m/z 235 [M + H] + ; 3.36 min (ret time)
D171
l,2-difluoro-4-(4-vinylphenoxy)b
Figure imgf000073_0002
The title compound was prepared by a procedure similar to that described for D162 starting
(3 ,4-difiuorophenoxy)benzaldehyde .
LC-MS (ESI): m/z 233 [M + H] + ; 3.99 min (ret time)
D172
2-(4-(3,4-difluorophenoxy)phe
Figure imgf000073_0003
The title compound was prepared by a procedure similar to that described for D163 starting from l,2-difluoro-4-(4-vinyIphenoxy)benzene.
LC-MS (ESI): m/z 234 [M -17] + ; 3.14 min (ret time).
D173
4-(3,5-difluorophenoxy)-3-fluorobenzaIde yde
Figure imgf000073_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3,5-trifluorophenol.
LC-MS (ESI): m/z 253 [M + H] + ; 2.66 min (ret time) D174
(4-(3,5-difluorophenoxy)-3-fluorophenyl)methanol
Figure imgf000074_0001
The title compound was prepared by a procedure similar to that described for D5 starting (3,5 -difluorophenoxy) -3 -fluorobenzaldehyde .
LC-MS (ESI): m/z 237 [M + H] + ; 3,13 min (ret time)
D175
5-Formyl-2-((6-methylpyridin-3-yl)oxy)benzonitrile
Figure imgf000074_0002
The title compound was prepared by a procedure similar to that described for D4 starting methyl-3-pyridinol and 2-fluoro-5-formylbenzonitrile.
LC-MS (ESI): m/z 239[M + H] \ 1.74 min (ret time).
D176
5-(Hydroxymethyl)-2-((6-methyl
Figure imgf000074_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 5- Formyl-2-((6-methylpyridin-3-yl)oxy)benzonitrile.
LC-MS (ESI): m/z 241 [M + H] + , 1.45 min (ret time).
D177
3-(2-fIu or o-4-formylphenoxy) benzonitrile
Figure imgf000075_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-hydroxybenzonitrile.
LC-MS (ESI): m/z 242 [M + H] + ; 3.07min (ret time)
D178
3-(2-fluoro-4-(hydroxymethyl)phenoxy)benzonitrile
Figure imgf000075_0002
The title compound was prepared by a procedure similar to that described for D5 starting
(2-fluoro-4-formylphenoxy)benzonitrile
LC-MS (ESI): m/z 226 [M -17] + ; 2.74min (ret time)
2-fluoro-4-(hydroxymethyl)phenol
Figure imgf000075_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3- fluoro-4-hydroxybenzaldehyde. HPLC was used to monitor the completion of the reaction.
D180
3,5-difIuoro-4-(3-fluoro-4-(triflu hyde
Figure imgf000075_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-fluoro-4-(trifluoromethyl)phenol.
LC-MS (ESI): m/z 321 [M + H] + ; 3.70 min (ret time)
D181
(3,5-difluoro-4-(3-fluoro-4-(trifluoromethyl)phenoxy)phenyl)methanol
Figure imgf000076_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3 ,5-difluoro-4-(3 -fluoro-4-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 323 [M + H] + ; 3.46 min (ret time)
D182
3-fluoro-4-(3-(trifluoromethyl)p
Figure imgf000076_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-(trifluoromethyl)phenol.
LC-MS (ESI): m/z 285 [M + H]÷; 3.64 min (ret time).
D183
(3-fluoro-4-(3-(trifluoromethyI)
Figure imgf000076_0003
The title compound was prepared by a procedure similar to that described for D5 starting fluoro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 287 [M+ H]+; 3.30 min (ret time).
3,5-difluoro-4-(3-(trifluorome
Figure imgf000076_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-(trifluoromethyl)phenol.
LC-MS (ESI): m z 305 [M + H] ÷ ; 3.36 min (ret time).
D185 (3,5-difluoro-4-(3-(trifluorom
Figure imgf000077_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 3,5 difluoro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 305 [M + H] + ; 3.36 min (ret time).
D186
4-(3-cMorophenoxy)-3,5-difluoro
Figure imgf000077_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifIuorobenzaldehyde and 3-chIorophenol.
LC-MS (ESI): m/z 269 [M + H] + ; 3.63 min (ret time).
D187
(4-(3-chlorophenoxy)-3,5-difluo
Figure imgf000077_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 4- (3 -chlorophenoxy)-3 ,5 -difiuorobenzaldehyde,
LC-MS (ESI): m z 271 [M + H] + ; 3.28 min (ret time).
D188
4-((6-(trifluoromethyl)pyridine-2-yl)oxy)benzaIdehyde
Figure imgf000077_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- chloro-6-(trifluoromethyl)pyridine and 4-hydroxybenzaldehyde.
LC-MS (ESI): m z 268 [M + H] + ; 3.26 min (ret time)
D189 2-(trifluorom ethyl)-6-(4-vmylphe
Figure imgf000078_0001
The title compound was prepared by a procedure similar to that described for D162 starting from 4- ((6-(trifluoromethyl)pyridine-2-yl)oxy)benzaldehyde.
XC-MS (ESI): m z 266 [M + H] + ; 3.79 min (ret time)
P190
2-(4-((6-(trifluoromethyl)pyridin-2-yl)oxy)phenyI)ethanol
Figure imgf000078_0002
The title compound was prepared by a procedure similar to that described for D163 starting from 2- (trifluoromethyl)-6-(4-vinylphenoxy)pyridine.
D191
2-(4-bromo-3-fluorophenoxy)-5-fo
Figure imgf000078_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fmoro-5-foimylbenzonitrile and 4-bromo-3-fluorophenol.
XC-MS (ESI): m/z 320, 322 [M + H] + ; 3.37 min (ret time) P192
2-(4-bromo-3-fluorophenoxy)-5-formylbenzonitrile
Figure imgf000078_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 2-
(4-bromo-3-fluorophenoxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 322, 324 [M + H] + ; 3.30 min (ret time)
P193
2-(3-cyanophenoxy)-5-formylbenzonitrile
Figure imgf000079_0001
The title compound was prepared by a procedure similar to that described for D4 starting fluoro-5-formylbenzonitrile and 3-hydroxybenzonitrile.
LC-MS (ESI): m/z 249 [M + H] + ; 2.82 min (ret time)
D194
2-(3-cyanophenoxy)-5-(hydroxymethy])benzonitrile
Figure imgf000079_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (3-cyanophenoxy)-5-formylbenzonitrile
LC-MS (ESI): m/z 251 [M + H] + ; 2.54 min (ret time)
D195
3-(2-fluoro-4-formy]phenoxy)benzonitrile
Figure imgf000079_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 3-hydroxybenzonitrile.
LC-MS (ESI): m/z 242 [M + H] + ; 3.07 min (ret time) D196
3-(2-fluoro-4-(hydroxyniethyl)phenoxy)benzonitrile
Figure imgf000079_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 3- (2-fluoro-4-formy lphenoxy )benzon itri I e .
LC-MS (ESI): m/z 226 [M - H20 + H] + ; 2.74 min (ret time)
P197
l-(3,4-difluorophenoxy)-2-fluoro-4-vinylbenzene
Figure imgf000080_0001
The title compound was prepared by a procedure similar to that described for D162 starting from bromo(methyl)triphenylphosphorane, potassium 2-methylpropan-2-olate and 4-(3,4-difluorophen- oxy)-3-fluorobenzaldehyde.
LC-MS (ESI): m/z no MS peak ; 3.94 min (ret time)
2-(4-(3,4-difluorophenoxy)-3-fIuorophenyl)ethanol
Figure imgf000080_0002
The title compound was prepared by a procedure similar to that described for D163 starting from 1- (3 ,4-difluorophenoxy)-2-fluoro-4-vinylbenzene .
LC-MS (ESI): m/z 251 [M - H20 + H] + ; 3.13 min (ret time)
D199
4-phenoxybenzaldehyde.
Figure imgf000080_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and phenol.
LC-MS (ESI): m z 199 [M+l]+; 3.05 min (ret time).
D200
(4-phenoxyphenyI)methanoL
Figure imgf000080_0004
The title compound was prepared by a procedure similar to that described for D5 starting from (4- phenoxyphenyl)methanol .
LC-MS (ESI): m z 201 [M+l]+; 2.82 min (ret time).
D201 4-(3-fluoro-4-(trifluoromethyl)phenoxy)benzaIdehyde
Figure imgf000081_0001
The title compound was prepared by a procedure similar to that described for D4 startin fluorobenzaldehyde and 4-fluoro-3-(trifluoromethyl)phenol.
D202
(4-(3-fluoro-4-(trifluoroniethy])phenoxy)phenyI)met anol
Figure imgf000081_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 4- (3-fluoro-4-(trif1uoromethyl)phenoxy)benzaIdehyde.
LC-MS (ESI): m/z 269 [M - H20 + H]+; 3.29 min (ret time).
D203
3-fluoro-4-(3-fluorophenoxy)benzaIdehyde
Figure imgf000081_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3- fluorophenol and 3,4-difIuorobenzaldehyde,
LC-MS (ESI): m/z 235 [M + H]+; 3.38 min (ret time). D204
2-fluoro-l-(3-fluorophenoxy)-4-vinyl
Figure imgf000081_0004
The title compound was prepared by a procedure similar to that described for D162 starting from 3- fl uoro-4 -(3 -fl uorophenoxy)benzaldehyde .
LC-MS (ESI): m/z 233 [M + H]+; 3.92 min (ret time).
D205
2-(3-fluoro-4-(3-fluorophenoxy)phenyI)ethanol
Figure imgf000082_0001
The title compound was prepared by a procedure similar to that described for D163 starting from 2- fluoro-l-(3-fluorophenoxy)-4-vinylbenzene.
LC-MS (ESI): m z 251 [M + H]+; 3.10 min (ret time).
D2Q6
4-(4-chIoro-3-fluorophenoxy)benzaldehyde
Figure imgf000082_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 4- fluorobenzaldehyde and 4-chloro-3-fluorophenol.
LC-MS (ESI): m/z 251 [M + H]+; 3.58 min (ret time).
D207
{4-(4-chloro-3-fluorophenoxy)phenyl)methanol
Figure imgf000082_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
[(4-chloro-3-fluorophenyl)oxy]benzaldehyde.
LC-MS (ESI): m/z 253 [M + H]+; 3.22 min (ret time). D208
4-((2-chIoropyridin-4-yl)oxy)-3-fluorobenzaldehyde
Figure imgf000082_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 2-chloropyridin-4-ol.
LC-MS (ESI): m/z 252 [M + Hf ; 2.93 min (ret time).
D2Q9
4-(2-fluoro-4-formylphenoxy)picolinonitrile o'
CN
F
To a solution of 4-((2-chloropyridin-4-yl)oxy)-3-fluorobenzaldehyde (580 mg, 2.31 mmol) and dicyanozinc (271 mg, 2.31 mmol) in Ν,Ν-dimethylacetamide (DMA) (4 mL) was added tetrakis(triphenylphosphine)palladium(0) (266 mg, 0.230 mmol). The reaction mixture was sealed in a microwave vial and irradiated with a microwave using initial normal to 100 °C for lh, and then filtered. Direct purification via reversed phase chromatography (acetonitrile/water: 5%-95%, 0.25% NH4OH) afforded the title product (170 mg) as a white solid.
LC-MS (ESI): m/z 243 [M + H]+; 2.69 min (ret time). D21Q
4-(2-fluoro-4-(hydroxymethyl)ph
Figure imgf000083_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4- (2-fluoro-4-formylphenoxy)picolinonitrile.
LC-MS (ESI): m/z 245 [M + H]+; 2.38 min (ret time).
D211
5-formyl-2-((2-(trifluoromethyl)pyrimidin-5-yl)oxy)benzonitrile
Figure imgf000083_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- (trifluoromethyl)pyrimidin-5-ol and 2-fluoro-5-formylbenzonitrile.
LC-MS (ESI): m/z 294 [M + H]+; 2.90 min (ret time)
D212
5- (hydroxym ethyl)-2-((2-(trifluoromethyI)pyrimidin-5-yl)oxy)benzonitriIe
Figure imgf000083_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-((2-(trifluoromethyl)pyrimidin-5-yl)oxy)benzonitrile.
LC-MS (ESI): m/z 296 [M + H]+; 2.63 min (ret time) D213
2-Hydroxy-5-iodobenzomtrile
Figure imgf000084_0001
To a solution of 2-hydroxy-benzonitrile (47.6 g, 0.400 mmol) in CH3CN (500 mL) was added
CF3S03H (40 mL) dropwise at 0 °C. The reaction mixture was stirred at 0 °C for 20 min, and then NIS (108 g, 0.48 mmol) was added. The mixture was stirred at room temperature overnight, then concentrated, diluted with H20 (300 mL) and extracted with EA (300 mL X 3). Combined organic portions were dried over sodium sulfate, filtered and reconcentrated. Purification via column chromatography on silica gel (petroleum ether/ethyl acetate = 5/1) afforded the title product (80 g) as a white solid.
Ή NMR (400 MHz, CDC13) S 7.78 (s, 1 H), 7.70 (d, J= 8.4 Hz, 1 H), 6.77 (d, J= 8.8 Hz, 1 H).
D214
5-Iodo-2-((5-(trifluoromethyl)pyridiii-2-yI)oxy)benzomtrile
Figure imgf000084_0002
To a solution of 2-hydroxy-5-iodo-benzonitrile(80.0 g, 0.328 mol) and 2-chIoro-5-tri fluoromethyl- pyridine (60.0 g, 0.328 mol) in DMF (500 ml) was added K2C03 (91.0 g, 0.656 mol). The reaction mixture was refluxed overnight, then filtered and concentrated. Purification via column chromatography on silica gel (petroleum ether/ethyl acetate = 10/1) afforded the title product (120 g) as a white solid.
Ή NMR (400 MHz, CDC13) S: 8.38 (s, 1 H), 8.01 (m, 2 H), 7.95 (d, J = 8.0 Hz, 1 H), 7.22(d, J= 8.4 Hz, 1 H), 8.08 (d, J= 8.8 Hz, 1 H), 7.68 (s, 1 H). D215
Methyl 3-cyano-4-((5-(trifluoro ate
Figure imgf000084_0003
To a solution of 5-iodo-2-(5-trifluoromethyl-pyridin-2-yloxy)-benzonitrile(l 10 g, 0.29 mol) in MeOH (1500 mL) and DMF(400 mL) was added Pd(dppf)Cl2 (20 g). The mixture was stirred in autoclave (10L) at 100 °C under CO (1 MPa) for 72 hours. MeOH and DMF was removed in vacuo, the crude product was purified by column chromatography on silica gel (PE: EA = 20: 1 to 10:1) to afford 3-cyano-4-(5-trifluoromethyl-pyridin-2-yloxy)-benzoic acid methyl ester as a yellow oil (45 g, 48.2%).
Ή NMR (400MHz, CDC13) δ: 8.39 (s, 1H), 8.29 (d, J = 8.8 Hz, 1H), 8.01 (d, J = 8.8 Hz, 1H), 7.40 (d, J = 8.8 Hz, 1H), 7.27 (d, J = 8.4 Hz, 1H),3.94 (s, 3H).
D216
5-(HydroxymethyI)-2-((5-(trifluo enzonitrile
Figure imgf000085_0001
To a solution of 3 -cyano-4-(5-trifluoromethyl-pyridin-2-yloxy) -benzoic acid methyl ester (23 g, 0.070 mol) in anhydrous THF (200 mL) was added portionwise L1AIH4 (4.07 g, 0.11 mmol) at -78 °C. The reaction mixture was warmed to -55 °C slowly and stirred for 20 mins, diluted with water (3 mL 0.16 mmol, slow addition), filtered and concentrated. Purification via column
chromatography on silica gel (petroleum ether/ethyl acetate = 10/1 to 5/1) afforded the title product (12.5 g) as a colorless oil.
Ή NMR (400 MHz, CDC13)
Figure imgf000085_0002
8.8 Hz, 1 H), 7.72 (s, 1 H), 7.64 (d, J = 8.4 Hz, 1 H), 7.29 (d, J= 8.8 Hz, 1 H), 7.19 (d, J= 8.4 Hz, 1 H).
D217
5-formyI-2-(3,4,5-trifluorophenoxy)benzonitrile
Figure imgf000085_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile (200 mg, 1.341 mmol) and 3,4,5-trifluorophenol.
LC-MS (ESI): m/z 278 [M + H]+; 3.26 min (ret time)
D218
5-(hydroxymethyl)-2-(3,4,5-trifluorophenoxy)benzonitrile
Figure imgf000085_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 5- formyl-2-(3,4,5-trifluorophenoxy)benzonitriIe. LC-MS (ESI): m/z 280 [M + Hf; 3.00 min (ret time) D219
2-(4-chloro-3-fluorophenoxy)-5-for
Figure imgf000086_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formyIbenzonitrile and 4-chloro-3-fluorophenol.
LC-MS (ESI): m/z 276 [M + H]+; 3.34 min (ret time) D220
2-(4-chloro-3-fluorophenoxy)-5- e
Figure imgf000086_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (4-chloro-3-fluorophenoxy)-5-formyIbenzonitriIe
D221
4-(4-chloro-3-fluorophenoxy)-3,5-difl
Figure imgf000086_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde (1.0 g, 6.25 mmol),)4-chloro-3-fluoropheno].
LC-MS (ESI): m/z 287 [M + H]+; 3.64 min (ret time)
D222
(4-(4-chlo ro-3-fluo rop hcnoxy)-3,5-diil u orophenyI)m ethanol
Figure imgf000087_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(4-chloro-3-fluorophenoxy)-3,5-difluorobenzaldehyde.
LC-MS (ESI): m/z 271 [M - H20 + H]+; 3.35 min (ret time)
D223
4-(3-chloro-4-fluorophenoxy)-3,5-
Figure imgf000087_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-chloro-4-fmorophenol.
LC-MS (ESI): m/z 287 [M + H]+; 3.62 min (ret time)
D224
(4-(3-chIoro-4-fluorophenoxy)-3,5-d anol
Figure imgf000087_0003
The title compound was prepared by a procedure similar to that described for D5 starting (3-chloro-4-fluorophenoxy)-3 ,5 -difluorobenzaldehyde.
LC-MS (ESI): m z 271 [M - ¾0 + H]+; 3.32 min (ret time) D225
4-(3,5-difluorophenoxy)-3,5-difluorobenzaIdehyde
Figure imgf000088_0001
The title compound was prepared by a procedure similar to that described for D4 starting 3,4,5-trifiuorobenzaldehyde and 3,5-difluorophenol.
LC-MS (ESI): m z 271 [M+H]+; 3.54 min (ret time)
(4-(3,S- difluorophenoxy)-3 ,5-difluorophenyl)methanol
Figure imgf000088_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(3,5-difluorophenoxy)-3,5-difiuorobenzaldehyde.
LC-MS (ESI): m/z 255 [M+H]+; 3.20 min (ret time) D227
2-((6-chIoropyridin-3-yl)oxy)-5-formylbenzonitrile
Figure imgf000088_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 6-chloropyridin-3-ol.
LC-MS (ESI): m z 259 [M+H]+; 2.57 min (ret time)
D228
2-((6-chloropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile
Figure imgf000088_0004
To the solution of 2-((6-chloropyridin-3-yl)oxy)-5-formylbenzonitrile (340 mg, 1.314 mmol) in methanol (5ml), was added NaBEL; (74.6 mg, 1.972 mmol). The reaction mixture was stirred at rt for 30min, and then quenched by water and extracted with EA twice. The organic phase was washed with brine, dried over Na2S04 and evaporated in vacuo to give crude product 2-((6- chloropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile (240 mg, 0.921 mmol, 70.0 % yield) brown oil.
LC-MS (ESI): m z 261 [M+H]+; 2.47 min (ret time). D229
3 ,5- difluoro-4-(3-(trifluorom ethyl)
Figure imgf000089_0001
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4,5-trifluorobenzaldehyde and 3-(trifluoromethyl)phenol.
(LC-MS (ESI): m/z 303 [M+H]+; 3.69 min (ret time)
D230
(3,5-difluoro-4-(3-(trifluoromethyl)phenoxy)phenyl)metIianoI
Figure imgf000089_0002
The title compound was prepared by a procedure similar to that described for D5 starting from 3,5- difluoro-4-(3-(trifluoromethyl)phenoxy)benzaldehyde.
LC-MS (ESI): m/z 287 [M+H]÷; 3.36 min (ret time)
D231
4-((6-chloropyridin-3-yI)oxy)-3-fluorobenzaIdehyde
Figure imgf000089_0003
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 6-chloropyridin-3-ol.
LC-MS (ESI): m z 252 [M+H]+; 3.01 min (ret time)
D232
(4-((6-chIoropyridin-3-yl)oxy)-3-fluorophenyl)methanol
Figure imgf000090_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
((6-chloropyridin-3-yl)oxy)-3-fluorobenzaldehyde.
LC-MS (ESI): m/z 254 [M+H]+; 2.65 min (ret time)
D233
3-(2,6-difluoro-4-formylphenoxy)benzonitrile
Figure imgf000090_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 3 ,4,5 -trifluorobenzaldehyde and 3 -hydroxybenzonitrile.
LC-MS (ESI): m/z 260 [M+H]+; 3.17 min (ret time)
3-(2,6-difluo ro-4-(hydroxym ethyl)
Figure imgf000090_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 3-
(2,6-difluoro-4-formylphenoxy)benzonitrile.
LC-MS (ESI): m/z 244 [M+H]+; 2.85 min (ret time)
D236
4-((6-chloropyridin-3-yl)oxy)-3
Figure imgf000090_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 3,4- difluorobenzaldehyde and 6-chloropyridin-3-ol.
LC-MS (ESI): m/z 252 [M+H]+; 3.01 min (ret time) D237
(4-((6-chloropyridin-3-yl)oxy)-3
Figure imgf000091_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 4- ((6-chloropyridin-3-yl)oxy)-3-fluorobenzaldehyde.
LC-MS (ESI): m/z 254 [M+H]÷; 2.65 min (ret time)
D238
2-((2-chloropyridin-4-yl)oxy)-5-
Figure imgf000091_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 2-chloropyridin-4-ol.
LC-MS (ESI): m/z 259 [M+H]+; 2.68 min (ret time) D239
2-((2-chIoropyridin-4-yl)oxy)-5-(hydroxymethyI)benzonitrile
Figure imgf000091_0003
The title compound was prepared by a procedure similar to that described for D5 starting from 2- ((2-chloropyridin-4-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 261 [M+H]+; 2.37 min (ret time)
D240
5-(2-cyano-4-formyIphenoxy)picolinonitrile
Figure imgf000091_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- ((6-chloropyridin-3-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 250 [M+H]+; 2.50 min (ret time)
D241 5-(2-cyano-4-(hydroxymethyl)p
Figure imgf000092_0001
The title compound was prepared by a procedure similar to that described for D5 starting
(2-cyano-4-formylphenoxy)picolinonitrile.
LC-MS (ESI): m/z 252 [M + H]+; 2.24 min (ret time)
D242
2-((6-chloropyridin-3-yl)oxy)-5-formyIbenzonitrile
Figure imgf000092_0002
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 6-chloropyridin-3-ol.
LC-MS (ESI): m/z 259 [M+H]+; 2.77 min (ret time)
D243
2-{(6-chlor opyridin-3 -yl)oxy)-5-
Figure imgf000092_0003
The title compound was prepared by a procedure similar to that described for D5 starting
((6-chloropyridin-3-yl)oxy)-5-formylbenzonitrile.
LC-MS (ESI): m z 261 [M + H]+; 2.47 min (ret time).
D244
2-(3,5-difluorophenoxy)-5-formylbenzonitrile
Figure imgf000092_0004
The title compound was prepared by a procedure similar to that described for D4 starting from 2- fluoro-5-formylbenzonitrile and 3,5-difluorophenol.
LC-MS (ESI): m/z 260 [M + H]+; 3.17 min (ret time) D245
2-(3,5-difluorophenoxy)-5-(hydroxymethyl)benzonitrile
Figure imgf000093_0001
The title compound was prepared by a procedure similar to that described for D5 starting from 2- (3}5-difluorophenoxy)-5-formylbenzonitrile.
LC-MS (ESI): m/z 262 [M + H]+; 2.89 min (ret time)
D246
2-((2-chloropyridin-4-yl)oxy)-5-fo
Figure imgf000093_0002
The title compound was prepared by a procedure similar to that described for D4 starting fluoro-5-formylbenzonitrile and 2-chloropyridin-4-ol.
LC-MS (ESI): m/z 259 [M+H]+; 2.68 min (ret time) D247
4-(2-cyano-4-formylphenoxy)pi
Figure imgf000093_0003
To a solution of 2-((2-chloropyridin-4-yl)oxy)-5-formylbenzonitriIe (400 mg, 1.55 mmol) and dicyanozinc (182 mg, 1.55 mmol) in Ν,Ν-dimethylacetamide (DMA) (4 mL) was added tetrak- is(triphenylphosphine)palladium(0) (179 mg, 0.155 mmol). The reaction mixture was sealed in a microwave vial and irradiated with a microwave using initial normal to 100 °C for Ih and filtered. Direct purification via Biotage system with reversed phase chromatography (acetonitrile/water, 5%-95%, 0.25% NH4OH) afforded the title product (150 mg) as a white solid.
LC-MS (ESI): m/z 250 [M+H]+; 2.45 min (ret time)
4-(2-cyano-4-(hydroxymethyI)ph
Figure imgf000093_0004
The title compound was prepared by a procedure similar to that described for D5 starting from 4-
(2-cyano-4-fonnylphenoxy)picolinonitrile.
LC-MS (ESI): m/z 252 [M+H]+; 2.18 min (ret time)
El : 5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyi)-2-(3- (trifluoromethyl)phenoxy)benzonitrile
Figure imgf000094_0001
NaH (28.8 mg, 60%, 0.72 mmol) was added to a solution of 7-chloro-l -mefhyl-2, 3- dihydroimidazo [1, 2-c] pyrimidin-5(lH)-one (44 mg, 0.24 mmol) and 5-(hydroxymethyl)-2-(3- (trifluoromethyl)phenoxy)benzonitrile (71 mg, 0.242 mmol) in DMF (1.8 roL). The reaction mixture was stirred at rt for 30 min. Aqueous HC1 solution was added to adjust pH to ~7.
Purification by Mass Directed AutoPrep (MDAP) afforded the title compound as a white solid (60 mg, 56 % yield).
LC-MS (ESI): m/z 443 [M + H]+; 2.68 min (ret time).
E2 : 7-((3,5-difluoro-4-((6-(trifluoromethyl)pyridin-3-yI)oxy)benzyl)oxy)-l-methyI-2,3- dihydroimidazo [ 1 ,2-c] pyrimidin-5(lH)-one
Figure imgf000094_0002
The title compound was prepared by a procedure similar to those described for El starting from 7- chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one and (3,5-difiuoro-4-((6- (trifluoromethy l)pyridin-3 -yl)oxy)phenyl)methanol .
LC-MS (ESI): m/z 455 [M + H]+; 2.61 min (ret time).
E3: 7-((3-fluoro-4-((6-(trifluoromethyl)pyridin-3-yl)oxy)benzyI)oxy)-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000095_0001
The title compound was prepared by a procedure similar to those described for El starting from 7- chloro-l-methyl^^-dihydroimidazofl ^-cjpyrimidin-StlHj-one and (3-fluoro-4-((6- (trifluoromethyl)pyridin-3-yl)oxy)phenyl)methanol.
LC-MS (ESI): m/z 437 [M + H]+ ; 2.52 min (ret time).
E4 : 7-((4-(3,4-difluorophenoxy)-3-fluorobenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000095_0002
The title compound was prepared by a procedure similar to those described for El starting from 7- chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one and (4-(3,4-difluorophenoxy)-3- fluorophenyl)methanoI .
LC-MS (ESI): m/z 404 [M + H]+ ; 2.63 min (ret time). E5: 7-((4-(4-chIoro-3-(trifluoromethyl)phenoxy)benzyl)oxy)-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000095_0003
The title compound was prepared by a procedure similar to those described for El starting from 7- chloro-1 -methyl-2,3-dihydroirnidazo[l ,2-c]pyrimidin-5(lH)-one and (4-(4-chloro-3- (trifluoromethyl)phenoxy)phenyl)methanol .
LC-MS (ESI): m/z 452 [M + H]÷ ; 2.96 min (ret time).
E6 : 7-((2,3-difluorobenzyI)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000096_0001
The title compound was prepared by a procedure similar to those described for El starting from 7- chloro-l-methyl-2, 3-dihydroimidazo [1, 2-c] pyrimidrn-5(lH)-one and (2, 3- difluorophenyl)methanol.
LC-MS (ESI): m/z 294 [M + H]+ ; 1.83 min (ret time). E7
7-((3,4-difluorobenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000096_0002
Prepared in a manner similar to that described for El using (3,4 difluorophenyl)methanol (37.0 mg, 0.257 mmol), sodium hydride (28.0 mg, 0.701 mmol) and 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol) in DMF (1.5 mL)
LC-MS (ESI): m/z 294 [M + H]+ ; 1.86 min (ret time). E8
7-((2,4-difluorobenzyl)oxy)-l-iiiethyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000096_0003
Prepared in a manner similar to that described for El using (2,4-difluorophenyl)methanol (37.0 mg, 0.257 mmol, sodium hydride (28.0 mg, 0.701 mmol) and 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 294 [M + H]+ ; 1.81 min (ret time).
E9 7-((4-(3,4-difluorophenoxy)-3-fluorobenzyl)araino)-l-methyl-2,3-dihydroimida-zo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000097_0001
A mixture of 7-chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one,
trifluoroacetic acid salt (20 mg> 0.067 mmol),(4-(3,4-difluorophenoxy)-3-fluoropheny- l)methanamine, trifluoroacetic acid salt (27.0 mg, 0.073 mmol) and DIPEA (0.047 ml, 0.267 mmol) in N-methyl-2-pyrrolidone (NMP) (0.5ml) was sealed in a microwave vial and irradiated with a microwave using initial normal to 200 °C for 1 h. Then direct purification via Biotage reverse phase chromatography (acetonitrile/water: 5%-95% with 0.25% NH)OH) afforded the title product (7.3 mg) as a white solid.
LC-MS (ESI): m/z 403 [M + H]+ ; 2.72 min (ret time).
E1Q
7-((4-(4-chloro-3-(trifluoromethyl)phenoxy)benzyl)amino)-l-methyl-2,3-dihydroimidazo[l,2- c] pyrimidin-5(l H)-o ne
Figure imgf000097_0002
Prepared in a manner similar to that described for El using (4-(4-chloro-3- (trifluoromethyl)phenoxy)phenyl)methanamine, trifluoroacetic acid salt (41.6 mg, 0.100 mmol), 7- chloro-l-methyl-2,3-dmydroirmdazo[l,2-c]pyrimidm-5(lH)-one, trifiuoroace-tic acid salt (30 mg, 0.100 mmol) ) and DIPEA (0.070 mL, 0.400 mmol) in N-methyl-2-pyrrolidone (NMP) (0.5 niL). LC-MS (ESI): m/z 451 [M + H]+ ; 2.95 min (ret time).
Ell
7-((4-fluorobenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000097_0003
Prepared in a manner similar to that described for El using fluorophenyl)methanol (32.4 mg, 0.257 mmol), sodium hydride (28.0 mg, 0.701 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 276 [M + H]+ ; 1.80 min (ret time).
E12
7-((3,5- difluo ro-4-(4-fluorophenoxy)b enzyl)oxy)-l-m ethyl-2,3-dihydr oimidazo [1,2- c]pyrimidiu-5(lH)-one
Figure imgf000098_0001
Prepared in a manner similar to that described for El using (3,5-difluoro-4-(4-fluorophe- noxy)phenyl)methanol (59.4 mg, 0.234 mmol) in DMF(5 mL) and sodium hydride (28.0 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo-[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 404 [M + H]+ ; 2.57 min (ret time).
E13
7_(4_(4_chIoro-3-(trifluoromethyl)phenoxy)phenethoxy)-l-methyI-2,3-dihydroirni-dazo[l,2- c]pyrimidin-5(lH)-one,
Figure imgf000098_0002
Prepared in a manner similar to that described for El using 2-(4-(4-chloro-3-(trifIuorom- ethyl)phenoxy)phenyl)ethanol (74.0 mg, 0.234 mmol) in DMF (3 mL), sodium hydride, 60 % dispered into mineral oil (28.0 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.23 mmol).
LC-MS (ESI): m/z 466 [M + H]+ ; 3.12 min (ret time).
E14
7-(4-(3,4-difluorophenoxy)phenethoxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)- one
Figure imgf000099_0001
Prepared in a manner similar to that described for El using 2-(4-(3,4-difluoropheno- xy)phenyl)ethanol (58.5 mg, 0.234 mmol) in DMF(3 mL), sodium hydride, 60 % dispersed into mineral oil (28.0 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 400 [M + H]+ ; 2.66 min (ret time).
E15
7-((4-(3-chIoro-4-fluorophenoxy)-3-fluorobenzyl)oxy)-l-methyl-2>3-dihydroimida- c]pyrimidin-5(lH)-one
Figure imgf000099_0002
Prepared in a manner similar to that described for El using (4-(3-chloro-4-fluoropheno-xy)-3- fluorophenyl)methanol (63.2 mg, 0.234 mmol) in DMF (5 mL), sodium hydride (28.0 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimi-dazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 420 [M + H]+ ; 2.69 min (ret time).
E16
7-((3-(3-chlorophenoxy)-4-fluorobenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000099_0003
Prepared in a manner similar to that described for El using (4-(3-chlorophenoxy)-3- fluorophenyl)methanol (59.0 mg, 0.234 mmol) in DMF (5 mL), sodium hydride(28.0 mg, 1.168 mmol) and 7-cIiIoro-l-methyl-2,3-dihydroimi-dazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 402 [M + H]÷ ; 2.52 min (ret time).
E17 l-methyl-7-((3,4,5-trifluorobenzyl)oxy)-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000100_0001
Prepared in a manner similar to that described for El using (3,4,5-trifluorophenyl)methanol (27.1 mg, 0.167 mmol), sodium hydride (20 mg, 0.500 mmol) and 7-chloro-l -methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifiuoroacetic acid salt (50 mg, 0.167 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 312 [M + H]+ ; 2.07 min (ret time).
E18
2-(3-fluorophenoxy)-5-(((l-methyl-5-oxo- 1 ,2,3,5-tetrahy droimidazo [ 1 ,2-c] pyrimidin-7- yl)oxy)methyl)benzonitrile
Figure imgf000100_0002
Prepared in a manner similar to that described for El using 2-(3-fluorophenoxy)-5- (hydroxymethyl)benzonitrile (80 mg, 0.329 mmol), sodium hydride (30 mg, 0.750 mmol) and 7- chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one, trifiuoroacetic acid salt (70 mg, 0.234 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 393 [M + H]+ ; 2.43 min (ret time).
E19
7-((3,5-difl orobenzyI)oxy)-l-methyl-2,3-dihydroimidazo[l,2~c]pyrimidin-5(lH)-one
Figure imgf000100_0003
Prepared in a manner similar to that described for El using (3,5-difluorophenyl)methanol (26.5 mg, 0.184 mmol, sodium hydride (20.02 mg, 0.501 mmol) and 7-chloro-l -methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol) ) in DMF (1.5 mL).
LC-MS (ESI): m/z 294 [M + H]÷ ; 1.90 min (ret time). E20
7-((3-fluoro-4-(3-(trifluoromethyI)phenoxy)benzyl)oxy)-l-methyI-2,3-dihydroimid-azo[l,2- c]pyrimidin-5(lH -one
Figure imgf000101_0001
Prepared in a manner similar to that described for El using (3-fluoro-4-(3- (trifluoromethyl)phenoxy)phenyl)methanol (90 mg, 0.314 mmol) in DMF (1.5 mL), sodium hydride (30 mg, 0.750 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)- one, trifluoroacetic acid salt (70 mg, 0.23 mmol).
LC-MS (ESI): m/z 436 [M + H]+ ; 2.81 min (ret time). E21
7-((3-fluoro-4-(4-fluorophenoxy)benzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000101_0002
Prepared in a manner similar to that described for El using (3-fluoro-4-(4-fluorophen- oxy)phenyl)methanol (55.2 mg, 0.234 mmol) in DMF (4 mL), sodium hydride, 60% dispersed into mineral oil (46.7 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one, trifluoroacetic acid salt (70 mg, 0.23 mmol).
LC-MS (ESI): m/z 386 [M + H]+ ; 2.57 min (ret time). E22
2-(4-fluorophenoxy)-5-(((l-niethyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyriniidin-7- yl)oxy)m ethyl)benzonitriIe
Figure imgf000102_0001
Prepared in a manner similar to that described for El using 2-(4-fluorophenoxy)-5- (hydroxymethyl)benzonitrile (56.8 mg, 0.234 mmol) in DMF (4 mL), sodium hydride (46.7 mg, 1.17 mmol) and 7-chloro-l-methyl-2,3-dihydroimi-dazo[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.23 mmol).
LC-MS (ESI): m/z 393 [M + H]+ ; 2.45 mm (ret time).
E23
7-(4-(3 ,4-difluorophenoxy)-3-fluorophenethoxy)- 1 -raethyl-2,3-dihy droimidazo [1,2- c]pyrimid -5(lH)-one, trifluoroacetic acid salt
Figure imgf000102_0002
Prepared in a manner similar to that described for El using 2-(4-(3,4-difluorophenoxy)-3- fiuorophenyl)ethanol (62.7 mg, 0.234 mmol) in DMF (4 mL), sodium hydride, 60% dispersed into mineral oil (46.7 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 418 [M + H]+ ; 2.70 min (ret time).
E24
5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)met yI)-2-(4- (trifluoromethyl)phenoxy)be
Figure imgf000102_0003
Prepared in a manner similar to that described for El using 5-(hydroxymethyl)-2-(4- (trifluoromethyl)phenoxy)benzonitrile (90 mg, 0.307 mmol), sodium hydride (30 mg, 0.75 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.23 mmol) in DMF (1.5 mL) .
LC-MS (ESI): m/z 443 [M + H]+ ; 2.72 min (ret time).
E25 7-((4-(4-chlor o-3-fluorophenoxy)benzyl)oxy)- 1-m ethyl-2,3-dihydroimidazo [ 1 ,2-c] pyrimidin- 5(lH)-ODe
Figure imgf000103_0001
Prepared in a manner similar to that described for El using (4-(4-chloro-3- fluorophenoxy)phenyl)methanol (46.4 mg, 0.184 mmol) ,sodium hydride (20.02 mg, 0.501 mmol) and T-chloro-l-methyl^jS-dihydroimidazofl^-clpyrimidin-Stl^-one, trifluoroacetic acid salt (50 mg, 0.167 mmol) in DMF (1.5 mL)
LC-MS (ESI): m/z 402 [M + H]+ ; 2.74 min (ret time). E26
7-((3-iluoro-4-(3-iluorophenoxy)benzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000103_0002
Prepared in a manner similar to that described for El using (3-fluoro-4-(3- fluorophenoxy)phenyl)methanol (45 mg, 0.1 1 mmol), sodium hydride (20 mg, 0.50 mmol) and 7· chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol) in DMF (lmL).
LC-MS (ESI): m/z 386 [M + H]+ ; 2.55 min (ret time).
E27
7-(3-fluoro-4-(3-fluorophenoxy)phenethoxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000103_0003
Prepared in a manner similar to that described for El using 2-(3-fluoro-4-(3- fluorophenoxy)phenyl)ethanol (45 mg, 0.180 mmol), sodium hydride (20 mg, 0.500 mmol) and 7- chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)~one, trifluoroacetic acid salt (50 mg, 0.167 mmol) in DMF (lmL). LC-MS (ESI): m/z 400 [M + H]+; 2.68 min (ret time).
E28
l-methyl-7-((4-phcnoxybenzyI)oxy)-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000104_0001
Prepared in a manner similar to that described for El using (4-phenoxyphenyl)methanol (33.4 mg, 0.167 mmol) in DMF(4 niL), sodium hydride (33.4 mg, 0.834 rnmol) and 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol).
LC-MS (ESI): m/z 350 [M + H]+ ; 2.45 min (ret time).
E29
7-((4-(4-fluoro-3-(trifluoromethyl)phenoxy)benzyl)oxy)-l-methyl-2,3-dihydroimid-azo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000104_0002
Prepared in a manner similar to that described for El using (4-(4-fluoro-3-(trifluoromet- hyl)phenoxy)phenyl)methanoI (66.9 mg, 0.234 mmol) in DMF(5 mL), sodium hydride (28.0 mg, 1.168 mmol) and 7-chloro-l-methyl-2,3-dihydroim-idazo[l,2-c]pjTimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol).
LC-MS (ESI): m/z 436 [M + H]+ ; 2.87 min (ret time).
E30
7-((4-(3-chloro-4-fluorophenoxy)benzyl)oxy)-l-methyl-2,3-dihydroiinidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000104_0003
Prepared in a manner similar to that described for El using (4-(3-chloro-4- fluorophenoxy)phenyl)methanol (46.4 mg, 0.184 mmol), sodium hydride (20 mg, 0.500 mmol) and 7'Chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol) in DMF (lmL)
LC-MS (ESI): m z 402 [M + H]+ ; 2.70 min (ret time). E31
5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-((2- (trifIuoromethyI)pyrimidin-5-yl)oxy)benzonitrile
Figure imgf000105_0001
Prepared in a manner similar to that described for El using 5-(hydroxymethyl)~2-((2- (trifluoromethyl)pyrimidin-5-yl)oxy)benzonitrile (20 mg, 0.068 mmol), potassium tertbutoxide (30.0 mg, 0.267 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (20 mg, 0.067 mmol) in tetrahydrofuran (THF) (0.5 mL).
LC-MS (ESI): m/z 445 [M + H]+ ; 2.43 min (ret time). E32
7-((3-fluoro-4-((6-(trifluoromethyl)pyridin-2-yl)oxy)benzyl)oxy)-l-methyl-2,3- dihydroimidazo [ 1 ,2-c] pyrimi
Figure imgf000105_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (40 mg, 0.133 mmol), sodium hydride (26 mg, 0.650 mmol) and (3-fluoro-4-((6-(trifluoromet-hyl)pyridin-2- yl)oxy)phenyl)methanol (64 mg, 0.223 mmol) in DMF (1 mL)
LC-MS (ESI): m/z 437 [M + H]+ ; 2.58 min (ret time). E33
3 -(((1 -methy 1-5-oxo- 1 ,2,3,5-tetra hy droimidazo [1 ,2-c] pyrimidin-7-yI)oxy)meth-yl) benzonitr He
Figure imgf000106_0001
Prepared in a manner similar to that described for El using 3-(hydroxymethyl)benzonitrile(13.33 mg, 0.100 mmol), sodium hydride (12.01 mg, 0.300 mmol) and 7-chloro-l -methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (30 mg, 0.100 mmol) in DMF (lmL).
LC-MS (ESI): m/z 283 [M + H]+ ; 1.61 min (ret time).
E34
2-(3,4-difluorophenoxy)-5-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yI)oxy)methyl)benzonitrile
Figure imgf000106_0002
Prepared in a manner similar to that described for El using 2-(3,4-difluorophenoxy)-5- (hydroxymethyi)benzonitrile(34.9 mg, 0.133 mmol), sodium hydride (16.02 mg, 0.400 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (40 mg, 0.133 mmol) in DMF (1 mL).
LC-MS (ESI): m/z 411 [M + H]+ ; 2.58 min (ret time).
E35
5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrirnidin-7-yl)oxy)metIiyl)-2-((S- (trifluoromethyl)pyridin-2 salt
Figure imgf000106_0003
Prepared in a manner similar to that described for El using 5-(hydroxymethyl)-2-((5- (trifluoromethyl)pyridin-2-yl)oxy)benzonitrile (50 mg, 0.170 mmol), potassium tert-butoxide (45 mg, 0.401 mmol) and y-chloro-l-methyl- ^-dihydroimidazofl ^-clpyrim-idin-SilHJ-one, trifluoroacetic acid salt (50 mg, 0.167 mmol) in DMF (1 mL).
LC-MS (ESI): m/z 444 [M + H]+ ; 2.52 min (ret time).
E36
7-((3-fluorobenzyl)oxy)-l-methyI- -dihydroimidazo[l,2-c]pyrimidin-5(lH)-
Figure imgf000107_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one} trifluoroacetic acid salt (50 mg, 0.167 mmol), sodium hydride (22 mg, 0.550 mmol) and (3-fluorophenyl)methanol (0.016 ml, 0.17 mmol) in DMF (1.5 mL)
LC-MS (ESI): m/z 276 [M + H]+ ; 1.77 min (ret time).
E37
2-(4-chloro-3-fluor ophenoxy)-5-(((l-m ethyl-5-oxo- 1 ,2,3 ,5-tetrahydroimidazo [1,2-c] py rimidin- 7-yI)oxy)methyl)benzonitrile, trifluoroacetic acid salt
Figure imgf000107_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol), sodium hydride (13.35 mg, 0.334 mmol) and 2-(4-chloro-3-fluorophenoxy)-5-(hydroxymethyl)benzonitrile (46.3 mg, 0.167 mmol) in DMF (1.5 mL)
LC-MS (ESI): m/z 427 {M + H]+ ; 2.67 min (ret time).
E38
5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-(3,4,5- trifluorophenoxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000108_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol), sodium hydride (22 mg, 0.550 mmol)and 5-(hydroxymethyl)-2-(3,4,5-trifluorophenoxy)benzonitrile (75 mg, 0.269 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 429 [M + H]+ ; 2.63 min (ret time).
E39
2-(3-chloro-4-fluorophenoxy)-S-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin- 7-yl)oxy)methyl)benzonitrile, trifluoroacetic acid sait
Figure imgf000108_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dmydroimidazo[l,2-c]pyrimidm-5(lH)-one, trifluoroacetic acid salt (50 mg, 0.167 mmol), sodium hydride (22 mg, 0.550 mmol) and 2-(3-chloro-4-fluorophenoxy)-5-(hydroxymethyl)benzonitrile (75 mg, 0.270 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 427 [M + H]+ ; 2.63 min (ret time).
E40
7-((3 ,4- dichlorobenzyl)oxy)- 1-m ethyl-2,3-dihydroimidazo [1 ,2-c] pyrimidin-5(l H)-o ne, trifluoroacetic acid salt
Figure imgf000108_0003
Prepared in a manner similar to that described for El using (3,4-dichlorophenyl)methanol (47.7 mg, 0.269 mmol) in sodium hydride (32.3 mg, 0.808 mmol), and 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (50 mg, 0.269 mmol). LC-MS (ESI): m z 326 [M + H]+; 2.19 min (ret time).
E41
7-((4-(3,4-dichlorophenoxy)-3-fluorobenzyl)oxy)-l-methyI-2,3-dihydroimidazo[l,2- c] pyrimidin-5(l H)-one
Figure imgf000109_0001
Prepared in a manner similar to that described for El using (4-(3,4-dichlorophenoxy)-3- fluorophenyl)methanol (0.101 g, 0.350 mmol) in tetrahydrofuran (THF) (8 mL), sodium hydride (0.021 g, 0.525 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[ls2-c]pyrimidin -5(1H)- one(0.065 g, 0.350 mmol) in DMF (1 mL).
LC-MS (ESI): m/z 436 [M +H]+ ; 1.99 min (ret time).
E42
7-((3-fluoro-4-(3,4,5-trifluorophenoxy)benzyl)oxy)-l-methyl-2)3-dihydroimi-dazo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000109_0002
Prepared in a manner similar to that described for El using (3-ίηιθΓθ-4-(3,4,5-ίΐΊΐΊυοΓορ- henoxy)phenyl)methanol in THF(6 mL), sodium hydride (0.013 g, 0.323 mmol) and 7-chloro-l- methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH) -one (0.040g, 0.216 mmol) in DMF (ImL) . LC-MS (ESI): m/z 422 [M +H]+ ; 1.90min (ret time).
E43
7-((4-(3,5-difluorophenoxy)-3-fluorobenzyl)oxy)-l-methyI-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one, trifluoroacetic acid salt
Figure imgf000109_0003
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (100 mg, 0.334 mmol), sodium hydride (40.0 mg, 1.00 mmol) and (4-(3,5-difluorophenoxy)-3-fluorophenyl)methanol
(110 mg, 0.433 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 404 [M + H]+ ; 2.67 min (ret time). E44
2-(4-fluoro-3-(trifluoromethyl)phenoxy)-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroi-midazo[l,2- c]pyrimidin-7-yl)oxy)methyl)benzonitrile, trifluoroacetic acid salt
Figure imgf000110_0001
Prepared in a manner similar to that described for El using 7-chloro-l -methyl-2,3-dihyd- roimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (100 mg, 0.334 mmol), sodium hydride (40.0 mg, 1.001 mmol) and 2-(4-fluoro-3-(trifluoromethyl)phenoxy)-5- (hydroxymethyl)benzonitrile (110 mg, 0.353 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 461 [M + H]+ ; 2.65 min (ret time). E45
7-((3-fluoro-4-(4-fluoro-3-(trifluoromethyl)phenoxy)benzyl)oxy)-l-methyI-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt
Figure imgf000110_0002
Prepared in a manner similar to that described for El using 7-chloro-l -methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (100 mg, 0.334 mmol), sodium hydride (40.0 mg, 1.001 mmol) and (3-fluoro-4-(4-fluoro-3- (trifluoromethyl)phenoxy)phenyl)methanol (110 mg, 0.362 mmol) in DMF(2 mL).
LC-MS (ESI): m/z 454 [M + H ; 2.81 min (ret time).
E46
7-((3-chloro-4-(3,4-difluorophenoxy)benzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one, trifluoroacetic acid salt
Figure imgf000111_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazoEl^-cJpyrimidin-S lHJ-one, trifluoroacetic acid salt (100 mg, 0.334 mmol), sodium hydride (40.0 mg, 1.00 mmol) and (3-chloro-4-(3,4-difluoropheno-xy)phenyl)methanol (110 mg, 0.406 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 454 [M + H ; 2.81 min (ret time).
E47
7-((3,4-difluorobeii2yl)oxy)-l-isopropyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt
Figure imgf000111_0002
Prepared in a manner similar to that described for El using sodium hydride (16.85 mg, 0.702 mmol) in THF (4 mL), (3,4-difluorophenyl)methanol (101 mg, 0.702 mmol) and 7-chloro-l-isopropyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(100 mg, 0.468 mmol) in DMF (2.00 mL).
LC-MS (ESI): m/z 322 [M + H]+ ; 1.11 min (ret time).
E48
3-(((l-isopropyl-5-oxo-l,2,3,5-tetrahydroiiuidazo[l,2-c]pyrimidin-7-yl)oxy)me- thyI)benzonitriIe
Figure imgf000111_0003
Prepared in a manner similar to that described for El using sodium hydride (17.97 mg, 0.449 mmol) in THF (4 mL), 3-(hydroxymethyl)benzonitrile (59.8 mg, 0.449 mmol) and 7-chloro-l-isopropyl- 2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (80 mg, 0.374 mmol) in DMF (2.00 mL).
LC-MS (ESI): m/z 311 [M + H]+ ; 1.04 min (ret time).
E49 5-(((l-me thyl-5-οχο- 1 ,2,3 ,5-tetr ahydroimidazo [ 1 ,2-c) pyrimidin-7-yl) oxy)methyl)-2-((6- (trifluor om ethyl)pyridin-3 -yl)oxy)b enzonitrile
Figure imgf000112_0001
Prepared in a manner similar to that described for El using sodium hydride (6.52 mg, 0.272 mmol), 5-(hydroxymethyl)-2-((6-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile (80mg, 0.272 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (50.5 mg, 0.272 mmol).
LC-MS (ESI): m/z 444 [M + H]+ ; 1.60 min (ret time).
E50
7-((4-chloro-3-fluorobenzyl) oxy)-l-methy 1-2,3- dihydroimidazo [ 1 ,2- c] pyrimidin-5( 1H)- trifluoroacetic acid salt
Figure imgf000112_0002
Prepared in a manner similar to that described for El using (4-chloro-3-fluorophenyl)m-etbanol (43.3 mg, 0.269 mmol) in DMF (3 mL), sodium hydride (32.3 mg, 0.808 mmol) and 7-chloro-l- methyl-2,3-dihydroimidazo[l,2-c]pyrimi-din-5(lH)-one (50 mg, 0.269 mmol).
LC-MS (ESI): m/z 310 [M +H]+ ; 2.10 min (ret time).
E51
5-(((l-isopropyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyI)-2-(3- (trifluoromethyl)phenoxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000112_0003
Prepared in a manner similar to that described for El using NaH (10.78 mg, 0.449 mmol) in THF (4 mL), 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)b-enzonitrile(132 mg, 0.449 mmol) and 7-chloro-l-isopropyl-2,3-dihydroimidazo[l,2-c]p-yrimidin-5(lH)-one(80 mg, 0.374 mmol) in DMF (2.00 mL).
I l l LC-MS (ESI): m/z 471 [M + H]+ ; 1.28 min (ret time).
E52
5-(2- cy ano-4-(((l-methyl-5-oxo- 1 ,2,3,5-tetrahydroimidazo [1 ,2-c] pyrimidiii-7- yl)oxy)methyl)phenoxy)-2-fluorobenzonitrile
Figure imgf000113_0001
Prepared in a manner similar to that described for El using 5-(2~cyano-4-(hydroxymethy- l)phenoxy)-2-fluorobenzonitrile(0.056 g, 0.207 mmol) in THF (8 mL), KOtBu (0.032 g, 0.283 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazotl,2-c]pyrarai-din-5(lH)-one(0.035 g, 0.189 mmol).
LC-MS (ESI): m/z 418 [M + H]+ ; 1.58 min (ret time).
E53
2-(3,4-difluorophenoxy)-5-(((l-isopropyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yI)oxy)methyl)benzonitrile
Figure imgf000113_0002
Prepared in a manner similar to that described for El using sodium hydride (16.85 mg, 0.702 mmol) in THF (4 mL), 2-(3,4-difluorophenoxy)-5-(hydroxymethyl)benzonitrile(100 mg, 0.468 mmol) in DMF (2.00 mL) and 7-chloro-l-isopropyl-2,3-dihydroimidazo[l,2-c]p>rimidiii-5(lH)-one.
LC-MS (ESI): m/z 322 [M + H]+ ; 1.11 min (ret time).
E54
7-((3-chloro-4-fluorobenzyI)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroaceric acid salt
Figure imgf000113_0003
Prepared in a manner similar to that described for El using (3-chloro-4-fluoropheny-l)methanol (55.4 mg, 0.345 mmol) in DMF(4 mL), sodium hydride(41.4 mg, 1.034 mmol) and 7-chloro-l- methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(64 mg, 0.35 mmol).
LC-MS (ESI): m/z 310 [M + H]+ ; 2.05 min (ret time).
E55
7-((3-fluoro-4-(5-methyl-lH-imidazol-l-yl)benzyl)oxy)-l-methyl-2,3-dihydroimida- c]pyrimidin-5(lH)-one
Figure imgf000114_0001
Prepared in a manner similar to that described for El using NaH (17.46 mg, 0.727 mmol), (3- fluoro-4-(5-methyl-lH -imidazol-l-yl)phenyl)methanol (100 mg, 0.485 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c] -pyrimidin-5(lH)-one (90 mg, 0.485 mmol).
LC-MS (ESI): m/z 444 [M + H]+ 1.37 min (ret time).
E56
S-(((l-methyl·5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrinlidin-7- l)o y)lllethyl)-2-((6- methylpyridin-3-yl)oxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000114_0002
Prepared in a maimer similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (80 mg, 0.267 mmol), sodium hydride(32.0 mg, 0.801 mmol) and 5-(hydroxymethyl)-2-((6-methylpyridin-3-yl)oxy)benzonitrile (64.1 mg, 0.267 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 390 [M +H]+ 1.59 min (ret time). E57
2-fluoro-4-(4-(((l-methyl-5-oxo-l,2,3,5 etrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)- 2-(trifluorom ethyl)phenoxy)b enzonitr ile
Figure imgf000115_0001
Prepared in a manner similar to that described for El using sodium hydride (13.49 mg, 0.337 mmol), (4-(3,4-difluorophenoxy)-3-(trifiuoromethyl)phenyl)methanol (70 mg, 0.225 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3 -dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(41.7 mg, 0.225 mmol).
LC-MS (ESI): m/z 461 [M + H]÷ ; 1.61 min (ret time).
E58
7-((4-(3,4-difIuorophenoxy)-3-(trifluoromethyl)benzyl)oxy)-l-methyl-2,3-dihydroi- midazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000115_0002
Prepared in a manner similar to that described for El using sodium hydride (15.78 mg, 0.394 mmol), (4-(3,4-difiuorophenoxy)-3-(trifluoromethyl)phenyl)methanol (80mg, 0.263 mmol) in THF (8 mL) and 7-chloro-l -methyl- 2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (48.8 mg, 0.263 mmol).
LC-MS (ESI): m/z 454 [M + H]+ ; 1.73 min (ret time).
E59
7-((4-(4-chloro-3-(trifluoromethyl)phenoxy)benzyl)oxy)-l-isopropyl-2,3-dihydroim-idazo[l,2- c]pyritnidin-5(lH)-one
Figure imgf000115_0003
Prepared in a manner similar to that described for El using (4-(4-chloro-3-(trifluoromet- hyl)phenoxy)phenyl)methanol (50 mg, 0.165 mmol), NaH (11.89 mg, 0.496 mmol) in 5 mL and 7- chloro-l-isopropyl-2,3-dihydroimidazo[l,2-c]pyr-imidin-5(lH)-one(52.9 mg, 0.248 mmol) in DMF (5 mL).
LC-MS (ESI): m/z 380 [M + H]+ ; 1.82 min (ret time). E6Q
3-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yI)oxy)methyI)benzomtrile
Figure imgf000116_0001
A solution of tert-butyl 7-((3-cyanobenzyl)oxy)-5-oxo-2,3-dihydroimidazo[l ,2-c]pyrim-idine- l (5H)-carboxylate (20 mg, 0.054 mmol) in dichloromethane (DCM) (4 mL) was added TFA (0.5 mL, 6.49 mmol) at room temperature. The reaction mixture was stirred at rt overnight, then concentrated to remove solvent, diluted with sat. NaHC03 (5mL) solution and EtOAc (15 mL). Separated organic part was dried over Na2S04, filtered and concentrated. Purification via MDAP (Gilson GX-281 , mobile phase: 0.01%NH4HCO3, C¾CN/water, 50-95%) afforded the title product (9 mg) as a white solid.
LC-MS (ESI): m/z 269 [M + H]+ ; 1.35 min (ret time)
E61
7-((3-chIoro-4-(3-(trifluoromethyl)phenoxy)benz l)oxy)-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000116_0002
Prepared in a manner similar to that described for E65 using sodium hydride (13.87 mg, 0.347 mmol), (3-chloro-4-(3-(trifluoromethyl)phenoxy)phenyl)methanol in THF (8 mL) and tert-butyl 7- chloro-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate (62.8 mg, 0.231 mmol). LC-MS (ESI): m/z 438 [M + H]+ ; 1.74 min (ret time).
E62
2-(3-cy anophenoxy)-5-(((l-methyI-5-oxo- 1 ,2,3,5-tetrahydroimidazo [ 1 ,2- c] pyrimidin-7- yl)oxy)methyl)benzonitrile, trifluoroacctic acid salt
Figure imgf000116_0003
Prepared in a manner similar to that described for El using 7-chloro-l -methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (70 mg, 0.234 mmol), sodium hydride (28.0 mg, 0.701 mmol) and 2-(3-cyanophenoxy)-5-(hydroxym-ethyl)benzonitrile (59
0.236 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 400 [M +H]+ ; 2.25 min (ret time).
E63
3-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,S-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyI)phenoxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000117_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one, trifluoroacetic acid salt (80 mg, 0.267 mmol), sodium hydride (40.0 mg, 1.001 mmol) and 3-(2-fluoro-4-(hydroxymethyl)phen-oxy)benzonitrile (64.9 mg, 0.267 mmol) in DMF (2 mL).
LC-MS (ESI) 393 [M + H]+ 2.35 min (ret time) E64
4- (2-cyano-4-(((5-oxo- 1 ,2,3 ,5-tetrahydroimidazo [ 1 ,2- c] pyrimidin-7-yl)oxy)methyl)p-henoxy)- 2-fluorobenzonitrile
Figure imgf000117_0002
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-(4-cyano-3- fluorophenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate (70 mg, 0.139 mmol) in DCM (4 mL) and TFA (0.5 mL).
LC-MS (ESI): m/z 404 [M +H]+ ; 1.54 min (ret time).
E65
2-(3-fluoro-4-(trifluoromethyl)phenoxy)-5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2- c]pyrimidin-7-yl)oxy)methyl)benzonitriIe
Figure imgf000117_0003
To a solution of 2-(4-fluoro-3-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonit-rile(257 mg, 0.825 mmol) in THF (8 mL) was slowly added NaH (45.0 mg, 1.125 mmol) at 0-40 °C. After 30min, tert-butyl V-chloro-S-oxo^^-dihydro-imidazotl ^-cJpyrimidine-ltSHJ-carboxylate (204 mg, 0.75 mmol) was added at room temperature. The reaction mixture was stirred at 40°C overnight, diluted with 8mL water and ethyl acetate (15mL). Separated organic part was dried over Na2S04, filtered and concentrated. Purification via prep-TLC (hexane: EtOAc-l :l) then MDAP (Gilson GX-281 0.01% N¾HC03, CH3CN/water, 50-95%) afforded the title product (30 mg) as a white solid.
LC-MS (ESI): m/z 447[M+H]÷ ; 1.39 min (ret time) E66
7-((3-fluoro-4-(4-fluoro-3-(trifluoromethyl)phenoxy)beiizyl)oxy)-2,3-dihydroimidaz-o[l,2- c] pyrimidin-5(l H)-one
Figure imgf000118_0001
Prepared in a manner similar to that described for E65 using NaH (11.04 mg, 0.276 mmol), (3- fluoro-4-(4-fluoro-3-(trifluoromethyl)phenoxy)-phenyl)methanol (56.0 mg, 0.184 mmol) and tert- butyl 7-chloro-5-oxo-2,3-dihydroimidazo[l J2-c]pyrimidine-l(5H)-carboxylate (50 mg, 0.18 mmol). LC-MS (ESI): m/z 440 [M +H]+ ; 1.70 min (ret time). E67
5-(((5-oxo-l ,2,3,5-tetr ahy droimid azo [1 ,2-c] pyrimidin-7-yl) oxy)raethyl)-2-(3- (trifluoromethyl)phenoxy)benzonitrile
Figure imgf000118_0002
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-(3- (trifluoromethyl)phenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)- carboxylate (30 mg, 0.057 mmol) in TFA (5 mL).
LC-MS (ESI): m/z 429[M + H]+ ; 1.65 min (ret time)
E68
7-((3 ,4- difluo rob enzyl)oxy)-2,3- dihydroimidazo [ 1 ,2-c] pyrimidin-5(lH)-one
Figure imgf000119_0001
Prepared in a manner similar to that described for E65 using sodium hydride (44.2 mg, 1.104 mmol) in THF (5 mL), (3,4-difluorophenyl)methanol (106 mg, 0.736 mmol) and tert-butyl 7-chloro-5- oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)-carboxylate (100 mg, 0.368 mmol).
LC-MS (ESI): m/z 280.1 [M + H]+ ; 1.450 min (ret time)
E69
l-methyl-7-(4-{(6-(trifluoromethyl)pyridin-2-yJ)oxy)phenethoxy)-2,3-dihydroimidaz-o[l,2- c]pyrimidin-5(lH)-one, trifluoroacetic acid salt
Figure imgf000119_0002
Prepared in a manner similar to that described for El using 2-(4-((6-(trifluoro-methyl)p-yridin-2- yl)oxy)phenyl)ethanol (76 mg, 0.269 mmol) in DMF(5 mL), sodium hydride (32.3 mg, 0.808 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (50 mg, 0.269 mmol).
LC-MS (ESI): m/z 433 [M + H]+ ; 2.53min (ret time) E70
2-(4-brorao-3-fluorophenoxy)-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroiinidazo[l,2-c]pyrimidin- 7-yl)oxy)methyl)benzonitrile
Figure imgf000119_0003
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2, 3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(200 mg, 1.078 mmol), sodium hydride (86 mg, 2.155 mmol) and 2-(4-bromo-3-fluorophenoxy)-5-(hydroxymethyl)benzonitrile (346 mg, 1.074 mmol) in DMF (5 mL).
LC-MS (ESI): m z 472 [M + H]÷ ; 2.68 min (ret time) E71 3-(4-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-(trifluo- romethyl)phenoxy)benzoiiitrile
Figure imgf000120_0001
To a solution of tert-butyl 7-((4-(3-cyanophenoxy)-3-(trifluoromethyl)benzyl)oxy)-5-oxo-2,3- dihydroimidazofl ^-cJpyrimidine-liSHJ-carboxylate (27 mg, 0.051 mmol) in DMF (2 mL) was added silica gel. The reaction mixture was sealed in a microwave vial and irradiated with a microwave at 120 °C for 4 h, and then diluted with EtOAc and water. Separated organic portions were dried over anhydrous Na2S0 , filtered and concentrated. Purification via MDAP afforded the title product (3 mg).
LC-MS (ESI): m/z 429 [M + H]+ ; 1.52 min (ret time).
E72
2-(3,4-difluorophenoxy)-5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyI)benzonitrile, trifluoroacetic acid salt
Figure imgf000120_0002
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-(3,4- difluorophenoxy)benzyl)oxy)-5-oxo-2,3-dihydrorrnidazo[l ,2-c]pyrimidine-l (5H)-carboxylate (50 mg, 0.101 mmol) in TFA (5 mL).
LC-MS (ESI): m/z 397 [M + H]+ ; 1.14 min (ret time)
E73
2-((5, 6-difluoropyridin-3-yl)oxy)-5-((( 1-m ethyl-5-oxo- 1 ,2,3,5-tetr ahydroimidazo [1,2- c]pyrimidin-7-yl)oxy)methyI)benzonitrile
Figure imgf000120_0003
Prepared in a manner similar to that described for El using 2-((5,6-difiuoropyridin-3-yl)oxy)-5- (hydroxymethyl)benzonitrile (131 mg, 0.5 mmol) in THE (4 mL), NaH (30.0 mg, 0.750 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (93 mg, 0.500 mmol). LC-MS (ESI): m/z 412 [M + H ; 1.58 min (ret time). E74
7-((3,5-difluoro-4-(4-fluorophenoxy)benzyl)oxy)-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)- one
Figure imgf000121_0001
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3,5-difiuoro-4-(4- fluorophenoxy)benzyl)oxy)-5-oxo-2,3-dmydroimidazo[l ,2-c]pyrimidine-l (5H)-carbo-xylate(150 mg, 0.306 mmol) and TFA (2 mL, 26.0 mmol) in DCM (10 mL).
LC-MS (ESI): m/z 390 [M + H]+ ; 1.58 min (ret time).
E75
7-((4-(3,4-difluorophenoxy)-3,5-difluorobenzyl)oxy)-l-methyl-2,3-dihydroimida-zo[l,2- c] pyrimidin-5(lH)-one
Figure imgf000121_0002
Prepared in a manner similar to that described for El using (4-(3,4-difluorophenoxy)-3,5- difluorophenyl)methanol (0.073 g, 0.269 mmol) in THF)(4 mL), sodium hydride (0.016 g, 0.404 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(0.050 g, 0.269 mmol).
E76
2-(3-chIoro-4-fluorophenoxy)-5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)benzonitriIe, trifluoroacetic acid salt
Figure imgf000121_0003
Prepared in a manner similar to that described for E60 using tert-butyl 7-((4-(3-chIoro-4- fJuorophenoxy)-3-cyanobenzyl)oxy)-5-oxo-2}3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxylate (80 mg, 0.156 mmol) in TFA(5 mL).
LC-MS (ESI): m/z 413 [M + H]+ ; 1.19 min (ret time)
E77
7-((3-fluoro-4-(3,4,5-trifluorophenoxy)beiizyl)oxy)-2,3-dihydroiiiiidazo[l,2-c]pyrimidin- 5(lH)-one, trifluoroacetic acid salt
Figure imgf000122_0001
Prepared in a manner similar to that described for E65 using sodium hydride(14.13 mg, 0.589 mmol) in THF (5 mL), (3-fluoro-4-(3,4,5-trifluorophenox-y)phenyl)methanol (120 mg, 0.442 mmol) and tert-butyl -7-chloro-5-oxo-2,3-dihydroim-idazo[l,2-c]pyrimidine-l(5H)-carboxylate (80 mg, 0.294 mmol).
LC-MS (ESI): m/z 408 [M + H]+ ; 1.64 min (ret time)
E78
4-(2-cyano-4-(((l-methyl-5-oxo- 1 ,2,3 ,5-tetr ahy dr oimidazo [ 1,2-c] pyrimidin-7- yl)oxy)methyI)phenoxy)-2-(trifluoromethyl)benzonitrile
Figure imgf000122_0002
Prepared in a manner similar to that described for El using sodium hydride (9.37 mg, 0.234 mmol), 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile (49.7 mg, 0.156 mmol) in THF (8 mL) and 7-chloro-l -methyl-2,3-dihydroimidazo-[l ,2-c]pyrimidin-5(lH)-one (29 mg, 0.156 mmol).
LC-MS (ESI): m z 468 [M + H]+ ; 1.59 min (ret time). E79
7-{(4-(3,4-difluorophenoxy)-3-(trifluoromethyl)benzyl)oxy)-2,3-dihydroimidazo[l,2- c] py rimidin-5(l H)-one
Figure imgf000123_0001
Prepared in a manner similar to that described for E71 using tert-butyl 7-((4-(3,4- difluorophenoxy)-3-(trifluoromethyl)benzyI)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine- l(5H)-carboxylat in DMF (2 mL) and silica gel.
LC-MS (ESI): m/z 440 [M + H]+ ; 1.67 min (ret time).
E80
5-((( l-methyl-5-oxo-l ,2,3,5-tetr ahydroimidazo [ 1 ,2-c] pyrimidin-7-y])oxy)methyI)-2-((2- (trifluoromethyl)pyridin-4-yI)oxy)benzonitrile
Figure imgf000123_0002
Prepared in a manner similar to that described for El using sodium hydride (12.28 mg, 0.307 mmol), 5-(hydroxymethyl)-2-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzonitrile (60.2 mg, 0.205 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo-[l,2-c]pyrimidin-5(lH)-one (38 mg, 0.205 mmol).
LC-MS (ESI): m/z 444 [M + H]+ ; 1.53 min (ret time).
E81
7-((3,5-difluoro-4-(4-fluoro-3-(trifluoromethyl)phenoxy)benzyl)oxy)-l-niethyl-2,3- dihydroimidazo [1 ,2-c] pyrimidin-5(lH)-one
Figure imgf000123_0003
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (30 mg, 0.162 mmol), sodium hydride (12.93 mg, 0.323 mmol) and (3,5-difluoro-4-(4-fluoro-3-(trifluoromethyl)pheno-xy)phenyl)m-ethanol (52.1 mg, 0.162 mmol) in DMF (1.5 ml). LC-MS (ESI): m/z 472 [M +Hf ; 2.90 min (ret time).
E82
7-((4-(3-chlorophenoxy)-3,5-difluorobenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2- c] pyrimidin-5(l H)-one
Figure imgf000124_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroirnidazo[l,2-c]pyrimidin-5(lH)-one (30 mg, 0.162 mmol), sodium hydride (12.93 mg, 0.323 mmol) and (4-(3-chlorophenoxy)-3,5-difluorophenyl)methanol (43.7 mg, 0.162 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 420 [M +H]+; 2.77 min (ret time).
E83
4-(2-fluoro-4-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)phenoxy)-2-(trifluoromethyl)beii20iiitriIe, trifluoroacetic acid salt
Figure imgf000124_0002
Prepared in a manner similar to that described for El using sodium hydride (12.9 mg, 0.323 mmol), 4-(2-fluoro-4-(hydroxymethyl)phenoxy)-2-(trifl oromethyl)benzonitrile (67,1 mg, 0.216 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (40 mg, 0.22 mmol).
LC-MS (ESI): m/z 461 [M +H]+ ; 1.29 min (ret time).
E84
7-((3,5-difluoro-4-(4-(trifluoromethyI)phenoxy)benzyI)oxy)-l-methyl-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000124_0003
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyriniidin-5(lH)-one(30 mg, 0.162 mmol), sodium hydride (12.93 mg, 0.323 mmol) and (3,5-difluoro-4-(4-(trifluoromethyl)phenoxy)phenyl)methanol (49.2 mg, 0.162 mmol) in DMF (1.5 mL).
LC-MS (ESI): m/z 454 [M +H]+ ; 2.90 min (ret time).
E85
7-((4-(4-chloro-3-(trifluoromethyI)phenoxy)-3-fluorobenzyl)oxy)-l-methyl-2,3
dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000125_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2, 3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (80 mg, 0.431 mmol), sodium hydride (35 mg, 0.875 mmol) and (4-(4-chloro-3-(trifIuoromethyl)phenoxy)-3-fluorophenyl)methanol (138 mg, 0.431 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 470 [M +H]+ ; 2.94 min (ret time).
E86
7-((4-(4-chloro-3-fluorophenoxy)-3,5-difluorobenzyl)oxy)-l-methyI-2,3-dihydroimi-dazo[l,2- c] pyrimidin-5(lH)-one
Figure imgf000125_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2, 3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and (4-(4-chloro-3-fluorophenoxy)-3,5-difluorophenyl)methanol (78 mg, 0.269 mmol) in DMF (2 mL).
LC-MS (ESI): m z 438 [M + H]+ ; 2.85 min (ret time).
E87
7-((4-(3 -chloro-4-fluorop enoxy)-3,5- difluorobenzyl)oxy)-l -methyI-2,3- dihy dr oimidazo [1,2- c] pyrimidin-5{l H)-one
Figure imgf000126_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and (4-(3-chloro-4-fluorophenoxy)-3,5-difluorophenyl)methanol (78 mg, 0.269 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 438 [M +H]+ ; 2.68 min (ret time). E88
4-(2-cyano-4~(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)p-henolxy)- 2-(trifluoromethyl)benzonitril
Figure imgf000126_0002
Prepared in a manner similar to that described for E71 using tert-butyl 7-((3-cyano-4-(4-cyano-3- (trifluoromethyl)phenoxy)benzyI)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimi-dine-l(5H)- carboxylate (140 mg, 0.253 mmol) in DMF (2 mL) and silica gel.
LC-MS (ESI): m/z 454 [M + H]+ ; 1.61 min (ret time).
E89
7-((4-(4-chIoro-3-(trifluoromethyl)phenoxy)benzyI)oxy)-2,3-dihydroimidazo[l,2-c]pyrimidin- 5(lH)-one
Figure imgf000126_0003
Prepared in a manner similar to that described for E71 using tert-butyl 7-((4-(4-chloro-3- (trifluoromethyl)pheiioxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l(5H)- carboxylate (140 mg, 0.260 mmol) and silica gel (3g, 200- 00 mesh).
LC-MS (ESI): m z 438 [M + H]+ ; 1.46 min (ret time).
E90 5-(2- cy a no-4-(((5-oxo- 1 ,2,3,5-tetrahydr oimidazo [ 1 ,2-c] pyrimidin-7-yl)oxy)methyl)p-henoxy)- 2-fluorobenzonitrile, trifluoroacetic acid salt
Figure imgf000127_0001
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-(3-cyano-4- fluorophenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l (5H)-carboxylate (40 mg, 0.079 mmol) in TFA (5 mL).
LC-MS (ESI): m/z 404 [M + H]+ ; 1.30 min (ret time)
E91
5- (((5-oxo- 1 ,2,3 ,5-tetr a hydr oimidazo [ 1 ,2-c] pyrimidin-7-yl)oxy)methyI)-2-((2- (trifluoromethyl)pyridm-4-yl)oxy)benzonitrile
Figure imgf000127_0002
Prepared in a manner similar to that described for E71 tert-butyl 7-((3-cyano-4-((2-(tri- fleoromethyl)pyridin-4-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimi-dine-l (5H)- carboxylate (80 mg, 0.151 mmol) in DMF (2 mL) and silica gel.
LC-MS (ESI): m/z 430 [M +H]+ ; 1.56 min (ret time).
E92
3-(4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methy])-2- (trifluoromethyl)phenoxy)- -(trifluoromethyl)benzonitriIe
Figure imgf000127_0003
Prepared in a manner similar to that described for El using sodium hydride (9.37 mg, 0.234 mmol), 3-(4-(hydroxymethyl)-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile (56.4 mg, 0.156 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroi-midazo[l,2-c]pyrimidin- 5(lH)-one (29 mg, 0.156 mmol).
LC-MS (ESI): m/z 511 [M + H]+ ; 1.79 min (ret time). E93
5-(((S-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yI)oxy)inetliyl)-2-((6- (trifluoromethyI)pyridin-3-yl) acid salt
Figure imgf000128_0001
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-((6-
(trifluoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxylate (40 mg, 0.076 mmol) in TFA (5 mL).
LC-MS (ESI): m/z 430 [M + H]+ ; 1.33 min (ret time) E94
7-((3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzyl)oxy)-l-methyl-2,3-dihy- droimida2o[l,2-c]pyrimidin-5( -one
Figure imgf000128_0002
Prepared in a manner similar to that described for El using sodium hydride (9.37 mg, 0.234 mmol), (3-fluoro-4-((2-(trifluoromethyl)pyridin"4-yl)oxy)phenyl)methanol (44.9 mg, 0.156 mmol) i THF (8 mL) and 7-chloro-l -methyl-2,3-dihydroimidaz-o[l ,2-c]pyrimidin-5(lH)-one (29 mg, 0.156 mmol).
LC-MS (ESI): m/z 437 [M + H]+ ; 1.62 min (ret time).
E95
4-(2-cyano-4-(((l-methyl-5-oxo-l ,2,3,5-tetrahydroimidazo [1,2-c] pyrimidin- yl)oxy)methyl)phenoxy)-2-fluorobenzonitriIe
Figure imgf000128_0003
Prepared in a manner similar to that described for El using sodium hydride (9.37 mg, 0.234 mmol), 4-(2-cyano-4-(hydroxymethyl)phenoxy)-2-fluorobenzonitrile(41.9 mg, 0.156 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimi-din-5(lH)-one(29 mg, 0.156 mmol). LC-MS (ESI): m/z 418 [M + H]+ ; 1.56 min (ret time). E96
2-(4-chloro-3-(trifluoromethyl)phenoxy)-5-(({5-oxo-l,2,3,5-tetrahydroimidazo[l,2- c]pyrimidin-7-yI)oxy)methyl)benzonitrile
Figure imgf000129_0001
Prepared in a manner similar to that described for E60 using tert-butyl 7-((4-(4-c loro-3-
(trifluoromethyl)phenoxy)-3-cyanobenzyI)oxy)-5-oxo-2,3-dihydroimidazo[l ,2-c]pyri-midine- l(5H)-carboxyIate (150 mg, 0.266 mmol) and TFA (5ml, 64.9 mmol) in DCM (5 mL).
LC-MS (ESI): m/z 463 [M+H]+; 1.68 min (ret time). E97
3-(4-(((l-methyl-S-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyriniidin-7-yl)oxy)methyl)-2- (trifluoromethy])phenoxy)-5-(trifluoromethyi)benzonitrile
Figure imgf000129_0002
Prepared in a manner similar to that described for El using sodium hydride (9.37 mg, 0.234 mmol), 3-(4-(hydroxymethyl)-2-(trifluoromethyl)phenoxy)-5-(trifluoromethyl)benzonitrile (56.4 mg, 0.156 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroi-midazo[l,2-c]pyrimidin-5(lH)-one (29 mg, 0.156 mmol).
LC-MS (ESI): m/z 511 [M +H]+ ; 1.79 min (ret time).
7-((4-(3,4-dichIorophenoxy)-3-fluorobenzyI)oxy)-2,3-dihydroimidazo[l,2-c]pyrimi-din-5(lH)- one
Figure imgf000129_0003
Prepared in a manner similar to that described for E71 using tert-butyl 7-((4-(3,4-dic- hlorophenoxy)-3-fluorobenzyl)oxy)-5-oxo-2,3-dihydroimidazo[l ,2-c]pyrimidine-l (5H)- carboxylate (30 mg, 0.057 mmol) in DMF (2 mL) and silica gel (150mg). LC-MS (ESI): m/z 422 [M + H]+ ; 1.72 min (ret time)
E99
7-((4-(3,5-difluorophenoxy)-3,5-difluorobenzyl)oxy)-l-methyl-2,3-dihydroimida- c] pyrimidin-5(l H)-one
Figure imgf000130_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(60 mg, 0.323 mmol), sodium hydride (25.9 mg, 0.047 mmol) and (4-(3,5-difluorophenoxy)-3,5-difluorophenyl)methanol (88 mg, 0.323 mmol) in DMF (2 mL)
LC-MS (ESI): m/z 422 [M + H]+ ; 2.72 min (ret time)
E100
2-((6-chloropyridin-3-yl)oxy)-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin- 7-yl)oxy)methyl)b enzonitril
Figure imgf000130_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one(60 mg, 0.323 mmol), sodium hydride (25.9 mg, 0.647 mmol) and 2-((6-chloropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrile (84 mg, 0.323 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 410 [M + H]+ ; 2.20 min (ret time)
E101
2-(4~chloro-3-(trifluoromethyI)phenoxy)-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydro-imidazo[l,2- c]pyrimidin-7-yl)oxy)methyl)b enzonitrile, trifluoroacetic acid salt
Figure imgf000131_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (80 mg, 0.431 mmol), sodium hydride (34.5 mg, 0. mmol) and 2-(4-chloro-3-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile (141 mg, 0.431 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 477 [M + H]+ ; 2.87 min (ret time)
E1Q2
7-((3,5-difluoro-4-(3-(trifluoromethyl)phenoxy)beiizyJ)oxy)-l-methyI-2,3-dihydroi- midazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000131_0002
Prepared in a manner similar to that described for El using 7-chloro-l-meihyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(60 mg, 0.323 mmol), sodium hydride (25.9 mg, 0.647 mmol) and (3,5-difluoro-4-(3-(trifluoromethyl)phenoxy)phenyI)methanol (98 mg, 0.323 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 454 [M + H]+ ; 2.87 min (ret time) E1Q3
7-((4-((6-chIoropyridin-3-yl)oxy)-3-fluorobenzyI)oxy)-l-methyl-2^-dihydroimid-azo[l,2- c]pyrimidin-5(lH)-one, trifl
Figure imgf000131_0003
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one(60 mg, 0.323 mmol), sodium hydride (25.9 mg, 0.647 mmol) and (4-((6-chloropyridin-3-yl)oxy)-3-fluorophenyl)methanol (98 mg, 0.388 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 403 [M + H]+ ; 2.29 min (ret time) E1Q4
3-(2,6-difluoro-4-(((l-inethyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyI)phenoxy)benzonitrile
Figure imgf000132_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one(60 mg, 0.323 mmol), sodium hydride (25.9 mg, 0.647 mmol) and 3-(2,6-difluoro-4-(hydroxymethyl)phenoxy)benzonitrile (84 mg, 0.323 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 411 [M + H]+ ; 2.47 min (ret time) E1Q5
5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyI)-2- (pyrimidin-5-yIoxy)benzonitriIe, trifluoroacetic acid salt
Figure imgf000132_0002
Prepared in a manner similar to that described for El using 5-(hydroxymethyl)-2-(pyrimidin-5- yloxy)benzonitrile (110 mg, 0.485 mmol) in DMF (4 mL), sodium hydride (58.2 mg, 1.455 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (90 mg, 0.485 mmol). LC-MS (ESI): m/z 377 [M + H]+ ; 1.71 min (ret time)
E106
S-(2-iluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydro-inidazo[l,2-c]pyri--iidin-7- yI)oxy)methyl)phenoxy)picolinonitrile, trifluoroacetic acid salt
Figure imgf000133_0001
To a solution of 7-((4-((6-chloropyridin-3-yl)oxy)-3-fluorobenzyl)oxy)-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidh>5(lH)-one(50 mg, 0.124 mmol) in Ν,Ν-dimethylacetamide (DMA) (0.5mL) was added dicyanozinc (14.57 mg, 0.124 mmol) and
tetrakis(triphenylphosphine)palladium(0) (14.34 mg, 0.012 mmol). The reaction mixture was sealed in a microwave vial and irradiated with a microwavEusing initial normal to 100 °C for 1 h, and then filtered. Purification via MDAP (Mass-Directed Autopreparation) afforded the title product as a TFA salt (8 mg) as a white solid.
LC-MS (ESI): m/z 394 [M + H]+ ; 2.15 min (ret time)
E107
2-((2-chloropyridin-4-yl)oxy)-5-(((l-methyl-S-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin- 7-yl)oxy)m ethyl) benzonitril e
Figure imgf000133_0002
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (65 mg, 0.350 mmol), sodium hydride (22 mg, 0.550 mmol) and 2-((2-chloropyridin-4-yl)oxy)-5-(hydroxymethyI)benzonitrile (91 mg, 0.350 mmol) in DMF (2 mL).
LC-MS (ESI): m/z 410 [M + H]÷ ; 2.14 min (ret time) E108
5-(2-cyano-4-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyriniidin-7-yl)ox- y)methyl)phenoxy)picolinonitriIe
Figure imgf000133_0003
Prepared in a manner similar to that described for El using 7-chloro-l -methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and 5-(2-cyano-4-(hydroxymethyl)phenoxy)picolinonitrile (67.7 mg, 0.269 mmol) DMF (2mL).
LC-MS (ESI): m/z 401 [M + H]+ ; 2.05 min (ret time)
E109
7-((4-((2-chloropyridin-4-yI)oxy)-3-fluorobenzyl)oxy)-l-metliyl-2,3-dihydroimidaz-o[lJ2- c]pyrimidin-5(lH)-one
Figure imgf000134_0001
Prepared in a manner similar to that described for El using 7-chloro-l -methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one(50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and (4-((2-chloropyridin-4-yl)oxy)-3-fluorophenyl)methanoI (68.3 mg, 0.269 mmol) in DMF (2mL).
LC-MS (ESI): m/z 403 [M + H]+ ; 2.23 min (ret time) E110
I -m ethyl-7-(4-((5-(trifluorom ethyl)pyridin-2-yl) oxy)phenethoxy)-2,3 -dihydroimid-azo [ 1 ,2- c]pyrimidin-5(lH)-one
Figure imgf000134_0002
Prepared in a manner similar to that described for El using 7-chIoro-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and 2-(4-((5-(trifluoromethyl)pyridin-2-yl)oxy)phenyl)ethanol (76 mg, 0.269 mmol) in DMF (lmL).
LC-MS (ESI): m z 433 [M + H]+ ; 2.60 min (ret time)
Ε1Π
2-(3,5-difluorophenoxy)-5"(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyri-midin-7- yl)oxy)methyl)benzonitriIe
Figure imgf000135_0001
Prepared in a manner similar to that described for El using 7-chloro-l-methyl-2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one(50 mg, 0.269 mmol), sodium hydride (21.55 mg, 0.539 mmol) and 2-(3,5-difluorophenoxy)-5-(hydroxymethyl)benzonitrile (70.4 mg, 0.269 mmol) in DMF (2mL).
LC-MS (ESI): m/z 411 [M + H]+ ; 2.52 min (ret time) E112
5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-(3- (trifluoromethyI)phenoxy)benzomtrile
Figure imgf000135_0002
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-(3- (trifluoromethyl)phenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxylate (30 mg, 0.057 mmol) in TFA (5 mL).
LC-MS (ESI): m/z 429 [M + H]+ ; 1.65 min (ret time)
E113
7-((3-chloro-4-(3,4-difluorophenoxy)benzyl)oxy)-2^-dihydroimidazo[l,2-c]pyrira-idin-5(lH)- one
Figure imgf000135_0003
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-chloro-4-(3,4- difluorophenoxyJbenzylJoxyJ-S-oxo^jS-dihydroimidazofl^-cJpyrimidine-l iS^-carboxylateiSO mg, 0.099 mmol) in DMF (2 mL) and silica gel (150mg).
LC-MS (ESI): 406 [M + H]+ ; 1.64 min (ret time)
E114 2-cbloro-5-(2-cyano-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)phenoxy)benzonitrile
Figure imgf000136_0001
Prepared in a manner similar to that described for El using 2-chloro-5-(2-cyano-4- (Iiydroxymethyl)phenoxy)ben2;onitrile(40 mg, 0.141 mmol) in THF (8 mL), sodium hydride (8.43 mg, 0.21 1 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyramidin-5(lH)-one (26.1 mg, 0.141 mmol).
LC-MS (ESI): m/z 434 [M + H]+ ; 1.59 min (ret time). E115
5-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyI)-2-((5- (trifluoromethyI)pyridin-3-yI)oxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000136_0002
Prepared in a manner similar to that described for El using sodium hydride (12.23 mg, 0.510 mmol) in THF (5 mL), 5-(hydroxymethyl)-2-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzonitrile(l 00 mg, 0.340 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo-[l,2-c]pyrimidin-5(lH)-one (60 mg, 0.323 mmol).
LC-MS (ESI): m/z 444 [M + H]+ ; 1.35 min (ret time) E116
2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile
Figure imgf000136_0003
Prepared in a manner similar to that described for El using sodium hydride (12.93 mg, 0.323 mmol), 2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(hydroxymethyl)benzonitrile (67.1 mg, 0.216 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo-[l,2-c]pyrimidin-5(lH)-one (40 mg, 0.216 mmol). LC-MS (ESI): m z 461.1 [M + H]+ ; 1.68 min (ret time).
E117
2-((5,6-difluoropyridin-3-yl)oxy)-5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidi-i-7- yI)oxy)methyl)benzonitrile
Figure imgf000137_0001
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-((5,6- difluoropyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxylate (14 mg, 0.028 mmol) in DCM (4 mL) and TFA (0.5 mL, 6.49 mmol).
LC-MS (ESI): m/z 398 [M + H]+ ; 1.53 min (ret time).
E118
4-(2-fluoro-4-(((5-oxo- 1 ,2,3,5-tetrahydr oimidazo [ 1 ,2-c] pyrimidin-7-yl)oxy)m ethyl)p-hen-oxy)- 2-(trifluoromethyI)benzonitri
Figure imgf000137_0002
Prepared in a manner similar to that described for E71 using tert-butyl 7-((4-(4-cyano-3- (trifluoromethyl)phenoxy)-3-fluorobenzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrim-idine-l - (5H)-carboxylate (75 nig, 0.137 mmol) in DMF (2 mL) and silica gel.
LC-MS (ESI): m/z 447 [M + H]+ ; 1.61 min (ret time).
E119
7-((3-fluoro-4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzyl)oxy)-2,3-dihydroimidazo[l,2- c]pyrimidin-5(lH)-one
Figure imgf000137_0003
Prepared in a manner similar to that described for E71 using tert-butyl 7-((3-fiuoro-4-((2-
(trifluoromethyl)pyridin-4-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyri-midine- l(5H)-carboxylate (50 mg, 0.096 mmol) in DMF (2 mL) and silica gel. LC-MS (ESI): m/z 423 [M + Hf ; 1.54 min (ret time).
E120
2-(3-fluoro-5-(trifluoromethyl)phenoxy)-5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2- c]pyrimidin-7-yI)oxy)methyl)benzonitrile
Figure imgf000138_0001
Prepared in a manner similar to that described for E71 using tert-butyl 7-((3-cyano-4-(3-fluoro-5- (trifluoromethyl)phenoxy)benzyl)oxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimi-dine-l (5H)- carboxylate(50 mg, 0.091 mmol) in DMF (2 mL) and silica gel.
LC-MS (ESI): m/z 447 [M + H]+ ; 1.63 min (ret time).
E121
7-((6-(3-chloro-5-(trifluoromethyl)phenoxy)pyridin-3-yl)inethoxy)-l-raethyI-2,3- dihydroimidazo[l,2-c]
Figure imgf000138_0002
Prepared in a manner similar to that described for El using sodium hydride (4.85 mg, 0.121 mmol) (6-(3-chloro-5-(trifluoromethyl)phenoxy)pyridin-3-yl)methanol (60 mg, 0.198 mmol) in THF (8 mL) and 7-chloro-l -methyl-2,3-dihydroimidazo[l,2-c]pyramidin-5(lH)-one (36.7 mg, 0.198 mmol).
LC-MS (ESI): m/z 453 [M +H]+ ; 1.65 min (ret time).
E122
2-chloro-4-(2-cya no-4-(((l -methyl-5-oxo-l ,2,3,5-tetrahy droimi dazo [ 1 ,2-cJ pyrimidin-7- yl)oxy)methyl)phenoxy)benzonitrile
Figure imgf000138_0003
Prepared in a manner similar to that described for El using 2-chloro-4-(2-cyano-4- (hydroxymethyl)phenoxy)benzonitrile (60 mg, 0.211 mmol) in THF (8 mL), sodium hydride (12.64 mg, 0.316 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)- one(39.1 mg, 0.211 mmol).
LC-MS (ESI): m/z 434 [M + H]+ ; 1.57 min (ret time).
E123
l-methyl-7-((4-((2-(trifluoromethyl)pyridin-4-yl)oxy)benzyl)oxy)-2,3-dihydroimid- c] pyrimidin-5(l H)-one
Figure imgf000139_0001
Prepared in a manner similar to that described for El using sodium hydride (4.85 mg, 0.121 mmol) (4-((2-(trifluoromethyl)pyridin-4-yl)oxy)phenyl)methanol (35 mg, 0.130 mmol) and 7-chloro-l- methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (24.13 mg, 0.130 mmol).
LC-MS (ESI): m z 418.8 [M + H]+ ; 1.33 min (ret time).
E124
5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-((5-(trifluo- romethyl)pyridin-3-yl)oxy)benzonitrile, trifluoroacetic acid salt
Figure imgf000139_0002
Prepared in a manner similar to that described for E60 using tert-butyl 7-((3-cyano-4-((5- (trifluoromethyl)pyridin-3-yl)oxy)ben2^
carboxylate (100 mg, 0.189 mmol) in DCM (5 mL) and TFA (3 mL, 38.9 mmol).
LC-MS (ESI): m/z 430 [M + H]+ ; 1.31 min (ret time).
E125
2-chloro-5-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-' yl)oxy)methyI)phenoxy)benzonitriIe
Figure imgf000139_0003
Prepared in a manner similar to that described for El using 2-chloro-5-(2-fluoro-4- (hydroxylmethyl)phenoxy)benzonitrile (60 mg, 0.216 mmol) in THF (8 mL), sodium hydride (12.96 mg, 0.324 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l,2-c]pyramidin-5(lH)-one (40.1 mg, 0.216 mmol).
LC-MS (ESI): m/z 427 [M + H]+ ; 1.64 min (ret time).
E126
7-((3-fluoro-4-((5-(trifluoroinethyl)pyridin-3-yl)oxy)benzyl)oxy)-l-methyl-2,3-dihyd- roimidazo [ 1,2-c] pyrimidin-5 -one
Figure imgf000140_0001
Prepared in a manner similar to that described for El using sodium hydride (5.01 mg, 0.209 mmol) in THF (5 mL), (3-fluoro-4-((5-(trifluoromethyl)pyridin-3-yl)oxy)phenyl)methanol (30 mg, 0.104 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l J2-c]pyrimidin-5(lH)-onethen (19.4 mg, 0.104 mmol).
LC-MS (ESI): m/z 437 [M + H]+; 1.56 min (ret time) E127
7-((6-(3-chloro-5-(trifluoromethyl)pheiioxy)pyridin-3-yl)methoxy)-l-methyI-2,3- dihydroimidazo [1,2-c] pyrimidin-5(lH)-one
Figure imgf000140_0002
Prepared in a manner similar to that described for El using sodium hydride (4.85 mg, 0.121 mmol), (6-(3-chloro-5-(trifluoromethyl)phenoxy)pyridin-3-yl)methanol (60 mg, 0.1 8 mmol) in THF (8 mL) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(36.7 mg, 0.198 mmol). LC-MS (ESI): m z 453 [M + H]+ ; 1.65 min (ret time).
E128
2-chIoro-4-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yI)oxy)merhyl)phenoxy)benzonitrile
Figure imgf000141_0001
Prepared in a manner similar to that described for El using 2-chloro-4-(2-fluoro-4- (hydroxymethyl)phenoxy)benzonitrile(100 mg, 0.360 mmol) in THF (8 mL), sodium hydride (21.6 mg, 0.540 mmol) and 7-chloro-l -methyl -2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (66.8 mg, 0.360 mmol).
LC-MS (ESI): m/z 427 [M + H]+ ; 1.60 min (ret time). E129
4-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,S-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)phenoxy)picolinonitrile, trifluoroacetic acid salt
Figure imgf000141_0002
Prepared in a manner similar to that described for El using 7-chloro-l -methyl- 2,3-dihydr- oimidazo [l,2-c]pyrimidin-5(lH)-one(50 mg, 0.269 mmol), sodium hydride (21 ,55 mg, 0.539 mmol) and 4-(2-fluoro-4- (hydroxymethyl)phenoxy)picolinonitrile (65.8 mg, 0.269 mmol) in DMF (I mL).
LC-MS (ESI): m/z 394 [M + H]+ ; 2.12 min (ret time).
E130
4-(2-cyano-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)o- xy)methyi)phenoxy)picolinonitriIe, trifluoroacetic acid salt
Figure imgf000141_0003
Prepared in a manner similar to that described for El using 7-chloro-l -methyl- 2,3- dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (50 mg, 0.27 mmol), sodium hydride (21.6 mg, 0.539 mmol)and 4-(2-cyano-4-(hydroxymethyl)phenoxy)picolinonitrile (67.7 mg, 0.269 mmol) in DMF
(2 mL).
LC-MS (ESI): m/z 401 [M + H]+ ; 2.03 min (ret time).
E131 7-((4-(3,4-difluorophenoxy)-3-fluorobenzyI)oxy)-2^-dihydroimidazo[l,2-c]pyramid-in-5(lH)- one
Figure imgf000142_0001
Prepared in a manner similar to that described for E71 using tert-butyl 7-((3-fluoro-4-((5- (trifluoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-5-oxo-2,3-dihydroirmdazo[l,2-c]pyrimidi carboxylate (35 mg, 0.067 mmol) in DMF (2 mL) and silica gel (150 mg).
LC-MS (ESI): m/z 423 [M + H]+ ; 1.51 min (ret time)
E132
7-((5-bromo-6-(3-(trifluoromethyl)phenoxy)pyridin-3-yI)methoxy)-l-methyl-2,3- dihydroi midazo [ 1 ,2-c] pyrimidiii-5(l H)-one
Figure imgf000142_0002
Preparedin a manner similar to that described for El using NaH (6.89 mg, 0.172 mmol), (5-bromo- 6-(3-(trifluoromethyl)phenoxy)pyridin-3-yl)methanol (60 mg, 0.17 mmol) in THF (8 mL) and 7- chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(32.0 mg, 0.172 mmol).
LC-MS (ESI): m z 497 [M + H]+ ; 1.37 min (ret time).
E133
5-(((5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)methyl)-2-(3-(trifluo- romethyl)phenoxy)nicotinonitrile
Figure imgf000142_0003
Preparedin a manner similar to that described for E60 using tert-butyl 7-((5-cyano-6-(3- (trifluoromethyl)phenoxy)pyridin-3-yl)methoxy)-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine- l(5H)-carboxylate(120 mg, 0.227 mmol) in DCM (4 mL) and TFA (0.873 mL, 11.3 mmol).
LC-MS (ESI): m/z 430 [M + H]÷ ; 1.20 min (ret time). E134
2-((5-chloropyridin-3-yl)oxy)-5-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin- 7-yl)oxy)methyl)benzonitriIe
Figure imgf000143_0001
Preparedin a manner similar to that described for El using sodium hydride (5.52 mg, 0.230 mmol) in THF(5 mL), 2-((5-chloropyridin-3-yl)oxy)-5-(hydroxymethyl)ben-zonitrile (30 mg, 0.115 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l,2-c]pyrimidi-n-5(lH)-one (21.4 mg, 0.1 15 mmol). LC-MS (ESI): m/z 410 [M + H]+ ; 1.26 min (ret time). E135
5-(((l-methyl-S-oxo-l,2,3,5-tetrahydroimidazo[l,2-clpyrimidin-7-yI)oxy)methyl)-2-(3- (trifluoromethyI)phenoxy)nicotinonitrile
Figure imgf000143_0002
Prepared in a manner similar to that described for El using sodium hydride (6.46 mg, 0.162 mmol), 5-(hydroxymethyl)-2-(3-(trifluoromethyl)phenoxy)nicotinonitrile(31.7 mg, 0.108 mmol) in THF (8 mL) and 7-chloro-l -methyl-2J3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (20 mg, 0.1 1 mmol). LC-MS (ESI): m/z 444.1 [M + H]+ ; 1.26 min (ret time).
E136
2-fluoro-4-(2-fluoro-4-((( l-methyl-5-oxo- 1 ,2,3,5-tetrahydr oimidazo [ 1 ,2-c] pyrimidin-7- yl) oxy)m ethyl)phenoxy)b enzonitrile
Figure imgf000143_0003
Prepared in a manner similar to that described for El using sodium hydride (5.51 mg, 0.230 mmol) in THF (5 mL), 2-fluoro-4-(2-fluoro-4-(hydroxymethyl)phenoxy)benzonitrile (30 mg, 0.115 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l,2-c]pyriniidin-5(lH)-one (21.3 mg, 0.115 mmol). LC-MS (ESI): m/z 41 1 [M + H]+ ; 1.33 min (ret time). E137
2-((5-fluoropyridin-3-yl)oxy)-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin- 7-yl)oxy)methyl)benzonitrile
Figure imgf000144_0001
Prepared in a manner similar to that described for El using sodium hydride (9.83 mg, 0.246 mmol), 2-((5-fluoropyridin-3-yl)oxy)-5-(hydroxymethyl)benzonitrilein THF (8 mL) and 7-chloro-l- methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (45.6 mg, 0.246 mmol).
LC-MS (ESI): m/z 394 [M + H]+ ; 1.07 min (ret time). E138
5-(2-cyano-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)ox- y)methyl)phenoxy)nicotinonitrile
Figure imgf000144_0002
Prepared in a manner similar to that described for El using NaH (5.73 mg, 0.239 mmol) in THF (5 mL), 5-(2-cyano-4-(hydroxymethyl)phenoxy)nico-tinenitriIe (30 mg, 0.1 19 mmol) and 7-chloro-l - methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one (22.2 mg, 0.119 mmol).
LC-MS (ESI): m/z 401 [M + H]+ ; 1.21 min (ret time).
E139
2-fluoro-5-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)phenoxy)benzonitrile
Figure imgf000144_0003
Prepared in a manner similar to that described for El using 2-fluoro-5-(2-fmoro-4-(hydr- oxymethyl)phenoxy)benzonitrile (40 mg, 0.153 mmol) in THF)(8 mL), sodium hydride (9.19 mg, 0.230 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyramid-in-5(lH)-one (28.4 mg, 0.153 mmol).
LC-MS (ESI): m/z 411 [M + H]÷ ; 1.23 min (ret time). E140
7-((3,5-difluoro-4-(3-fluoro-4-(trifluoromethyl)phenoxy)benzyI)oxy)-l-methyl-2,3- dihydroimidazo [ 1,2-c] pyrimi din-5(l H)-one
Figure imgf000145_0001
Prepared in a manner similar to that described for El using (3,5-difluoro-4-(3-fluoro-4- (trifluorometliyI)phenoxy)phenyl)methanol (122 mg, 0.377 mmol) in DMF (4 mL), sodium hydride (45.3 mg, 1.131 mmol) and 7-chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (70 mg, 0.377 mmol).
LC-MS (ESI): m/z 472 [M + H]+ ; 2.96 min (ret time).
E141
5-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)ox- y)methyl)phenoxy)nicotinonitriIe
Figure imgf000145_0002
Prepared in a manner similar to that described for El using NaH (5.90 mg, 0.246 mmol) in THF (5 mL) was added 5-(2-fluoro-4-(hydroxymethyI)phenoxy)n-icotinonitrile (30 mg, 0.12 mmol) and 7- chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyr-imidin-5(lH)-one (22.8 mg, 0.123 mmol).
LC-MS (ESI): m/z 394 [M + H]+ ; 1.23 min (ret time).
E142
3-fluoro-5-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo(l,2-cJpyrimidin-7-yI)ox- y)methyl)benzonitrile
Figure imgf000145_0003
Prepared in a manner similar to that described for El using 3-fluoro-5-(hydroxymethy- l)benzonitrile (163 mg, 1.08 mmol) i DMF (4 mL), sodium hydride (129 mg, 3.23 mmol) and 7- chloro-l-methyl^^-dihydroimidazoCl ^-cJpyrimidin-SilHJ-one (200 mg, 1.08 mmol).
LC-MS (ESI): m/z 301 [M + H]+; 0.88 min (ret time).
E143
7-((3-chloro-4,5- difluor obenzyl) oxy)- 1-m ethyl-2,3-dihydroimidazo [ 1 ,2-c] pyrii din-5(lH)-one
Figure imgf000146_0001
Prepared in a manner similar to that described for El using (3-chloro-4,5-difluorophen-yi)methanol (192 mg, 1.078 mmol) in DMF (4 mL), sodium hydride (129 mg, 3.23 mmol) and 7-chloro-l- methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)-one(200 mg, 1.078 mmol).
LC-MS (ESI): m/z 328 [M + H]+; 0.90 min (ret time).
E144
4-(2,6-difluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyl)phenoxy)-2-(trifluoromethyl)benzonitrile
Figure imgf000146_0002
Prepared in a manner similar to that described for El using 4-(2,6-difluoro-4-(hydrox- ymethyl)phenoxy)-2-(trifluoromethyl)benzonitrile(280 mg, 0.850 mmol) in DMF(5 mL), sodium hydride (61.2 mg, 2.55 mmol) and 7-chloro-l-methyl-2,3-dih-ydroimidazo[l,2-c]pyrimidin-5(lH)- one (158 mg, 0.850 mmol).
LC-MS (ESI): rn/z 479 [M + H]+; 1.06 min (ret time).
E145
l-methyI-7-((4-((5-(trifluoromethyl)pyridin-3-yl)oxy)benzyl)oxy)-2,3-dihydroi-midazo[l,2- c]pyrimidm-5(lH)-one
Figure imgf000147_0001
Prepared in a manner similar to that described for El using (4-((5-(trifluoromethyl)pyridin-3- yl)oxy)phenyl)methanol (250 mg, 0.929 mmol) in DMF (5 mL), sodium hydride (66.9 mg, 2.79 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(l H)-one (172 mg, 0.929 mmol).
LC-MS (ESI): m/z 419 [M + H]+; 1.06 min (ret time).
E146
2-fluoro-5-(((l-methyI-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)oxy)m- ethyl)benzonitrile
Figure imgf000147_0002
Prepared in a manner similar to that described for El using 2-fIuoro-5-(hydroxymethy- l)benzonitrile (326 mg, 2.16 mmol) in DMF (6 mL), sodium hydride (259 mg, 6.47 mmol) and 7- chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)-one (400 mg, 2.16 mmol).
LC-MS (ESI): m/z 301 [M + H]+; 0.93 min (ret time).
E147
7-((3,5-difluoro-4-((5-(trifluoromethy])pyridin-3-yI)oxy)benzyl)oxy)-l-methyl-2,3- dihydroimidazo[l,2-c]pyrimidin-5(lH)-one
Figure imgf000147_0003
Prepared in a manner similar to that described for El using (3,5-difluoro-4-((5-(trifluoro- methyl)pyridin-3-yl)oxy)phenyl)methanol (250 mg, 0.819 mmol) in DMF (5 mL), sodium hydride (59.0 mg, 2.46 mmol) and 7-chloro-l-methyl-2,3-dihydroi-midazo[l,2-c]pyrimidin-5(lH)-one(152 mg, 0.819 mmol).
LC-MS (ESI): m/z 455 [M + H]+; 0.93 min (ret time). 7-((3,4-difluoro-5-methylbenzyl)oxy)-l-methyl-2,3-dihydroimidazo[l,2-c]pyrimidin-5(lH)- one
Figure imgf000148_0001
Prepared in a manner similar to that described for El using (3,4-difluoro-5-methylpheny- l)metlianol (170 mg, 1.08 mmol) in DMF (4 mL), odium hydride (129 mg, 3.23 mmol) and 7- chloro-l -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)one(200 mg, 1.08 mmol).
LC-MS (ESI): m/z 308 [M + H]+; 0.98 min (ret time).
E149
4-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7-yl)ox- y)methyl)phenoxy)-2-methylbenzonitrile
Figure imgf000148_0002
Prepared in a manner similar to that described for El using 4-(2-fluoro-4-(hydroxymeth- yl)phenoxy)-2-methylbenzonitrile(1.00 g, 3.89 mmol) in DMF (10 mL), sodium hydride (0.280 g, 11.7 mmol) and 7-chloro-l-methyl-2,3-dihydroimidazo[l ,2-c]p-yrimidin-5(lH)-one (0.721 g, 3.89 mmol).
LC-MS (ESI): m/z 407 [M + H]+; 0.91 min (ret time). E150
3-(2-fluoro-4-(((l-methyl-5-oxo-l,2,3,5-tetrahydroimidazo[l,2-c]pyrimidin-7- yl)oxy)methyI)phenoxy)-5-(trifluoromethyI)benzonitrile, trifluoroacetic acid salt
Figure imgf000148_0003
Prepared in a manner similar to that described for El using 3-(2-fluoro-4-(hydroxym- ethyl)phenoxy)-5-(trifluoromethyl)benzonitrile (77 mg, 0.247 mmol) in DMF (5mL), sodium hydride(29.7 mg, 0.742 mmol) and 7-chloro -methyl-2,3-dihydroimidazo[l ,2-c]pyrimidin-5(lH)- one(45.9 mg, 0.247 mmol).
LC-MS (ESI): m/z 461 [M + H]+; 2.74 min (ret time).
E151
7-((3-fluoro-4-(3-fluoro-5-(trifIuoromcthyI)phenoxy)benzyl)oxy)-2,3-dihydroim-idazo[l,2- c] pyrimidin-5(lH)-one
Figure imgf000149_0001
Prepared in a manner similar to that described for E65 using (3-fluoro-4-(3-fluoro-5- (trifluoromethyl)phenoxy)phenyl)methanol (224 mg, 0.736 mmol) in THF (5 mL), sodium hydride (58.9 mg, 1.472 mmol) and tert-butyl 7-chloro-5-oxo-2,3-dihydroimidazo[l,2-c]pyrimidine-l(5H)- carboxyIatE(200 mg, 0.736 mmol).
LC-MS (ESI): m/z 440 [M + H]+; 1.18 min (ret time). D. Biological assay and data
The compounds of present invention are Lp-PLA2 inhibitors, and are useful in the treatment of diseases mediated by Lp-PLA2. The biological activities of the compounds of present invention can be determined by using any suitable assay for determining the activity of a compound as a Lp-PLA2 inhibitor, as well as tissue and in vivo models.
The biological activity data for each compound was either reported in at least one experiment or the average of multiple experiments. It is understood that the data described herein may have reasonable variations depending on the specific conditions and procedures used by the person conducting the experiments. Lipoprotein-associated phospholipase A2 (Lp-PLA2) biochemical assay
(1) Recombinant human Lp-PLA2 assay (rhLp-PLA2) (also referred to as "PED6" assay) N-((6-(2,4-dinitrophenyl)amino)-hexanoyl)-2-(4,4-difluoro-5,7~dimethyl-4-bora-3a,4a- diaza-5-indacene-3-pentanoyl)-l-hexadecanoyl-i«-glycero-3-phosphoethanolamine,
triethylammonium salt (PED6) is a commercially available fluorescently-labeled phospholipid, which is commercially available from Invitrogene and Molecular Probes. There is a quenching para-nitro phenyl (PNP) group in the sn3 position and a Bodipy fluorescein (FL) group in the sn2 position. Upon cleavage with Lp-PLA2) the Bodipy FL group is liberated and then may result in an increase in fluorescence. Inhibitors of Lp-PLA2 therefore prevent this cleavage and no fluorescent increase is observed.
The PED6 assay was run as an unquenched 10 μΙ_. assay. The source plate containing the compounds to be tested was prepared by making 1 :3 (by volume) serial dilution of the compounds within DMSO on 384-well microplate. Then, 0.01 μΐ^ of the compounds on compound source plate were transferred into 384 well Greiner 784076 (black) plates using ECHO liquid dispenser. 5μΙ_, of recombinant human Lp-PLA2 enzyme (4 nM (or 110 pM) rhLp-PLA2 in assay buffer of 50 mM HEPES, pH 7.4, 150 mM NaCl, 1 mM CHAPS) was added to each well of the plate. Plates were centrifuged for 10 sec at 500 rpm. After 30 minutes preincubation, 5 μί of substrate (4 μΜ (or 5 μΜ) PED6 [from 5 mM DMSO stock] in assay buffer of 50 mM HEPES, pH 7.4, 150 mM NaCl, 1 mM CHAPS) was added to 384 well Greiner 784076 (black) plates. Plates were centrifuged for 10 sec at 500 rpm. The plate was covered to protect it from light and incubated for 20 min at room temperature. The plates were read for fluorescence intensity at ex: 480 / em: 540 using ViewLux microplate imager for Envision spectrofluroimeters pIC50 data, curve and QC analysis was conducted by using XL fit module in Excel.
All exemplified compounds of the present invention were tested according to the above assays or similar assay as described above and were found to demonstrate inhibition activity to Lp- PLA2. The compounds described below were tested generally according to the PED6 assay described above. The plC5o value for each compound was either reported in at least one experiment or the average of multiple experiments. The upper limit for pIC50 obtained in this PED6 assay is 9.3. If a refined assay is used, compounds that exhibit ICso equal to 9.3 in the PED6 assay described above may demonstrate pIC50 higher than 9.3.
The pIC50 values in the PED6 assay for compounds of all examples were at least 5.0.
The pICjo values in the PED6 assay for examples 1-5, 12, 13, 15, 16, 18, 20, 22, 24, 25, 29, 34, 35, 37, 38, 41-45, 49, 51-53, 59, 61 -67, 70, 72-78, 80-89, 91, 93-96, 98-104, 107, 109, 111 , 112, 1 14-120, 122-126, 128-131 , 134, 136, 139, 140, 144, 147, and 149-151 were at least 8.0.
The ICso values in the PED6 assay for examples 4, 44, 45, 51, 65 -67, 70, 72, 76-78, 81- 83, 85-87, 101 , 102, 1 16, 118, 125, 128, 140, 144, 147 and 151 were at least 9.0.
Table 1 below provides the pIC50 for some exemplified compounds.
Figure imgf000150_0001
83 9.2
88 8.7
94 8.8
95 8.9
115 8.4
118 9.1
119 8.6
144 9.3
7 9.0
(2) PLA2 VIIB assay
PLA2 VIIB (also known as Novel Serine Dependent Lipase, NSDL) is a serine hydrolase with 40% amino acid identity with human Lp-PLA2. Sequence comparisons indicate that the PLA VIIB active site catalytic triad positions are similar to those of Lp-PLA2. Similar to Lp-PLA2, it is capable of hydrolyzing oxidatively modified phospholipids and may be assayed using known Lp- PLA2 substrates.
Upon cleavage by a phopholipase, PLA2 VHB liberates a fluorescent Bodipy group. Recombinant human PLA2 VIIB is used as the phospholipase source in this assay, and compounds are screened to test their degree of inhibition in this assay. The assay is used to determine the degree of selectivity of the testing compounds between PLA2 VIIB and Lp-PLA2.
The PLA2 VIIB assay was applied as an unquenched 10 μΐ, assay. The source plate containing the compounds is prepared by making 1 :3 (by volume) serial dilution of the compounds with pure DMSO on 384-well microplate. 0.01 μΙ_. of compounds on the compound source plate were transferred into 384 well Greiner 784076 (black) plates-by ECHO liquid dispenser. 5 μΐ^ of Novel Serine Dependent Lipase (NSDL) enzyme (5 nM NSDL in assay buffer of 50 mM HEPES, pH 7.4, 150 mM NaCl, 1 mM CHAPS) was added to each well. Plates were centrifuged for 10 sec at 500 rpm. After 30 minutes preincubation, 5 L of substrate (5 μΜ PED6 [from 5 mM DMSO stock] in assay buffer of 50mM HEPES, pH 7.4, 150 mM NaCl, 1 mM CHAPS) was added to 384 well Greiner 784076 (black) low-volume plates. Plates were kinetic read by starting read immediately after PED6 addition at ex: 480 / em: 540 using ViewLux microplate reader or Envision spectrofluorimeters. IC 50 data (which may be converted to pIC50 data), curve and QC analysis was conducted using XLfit module in Excel.
Compounds of examples 1-149 were tested in PLA2 VIIB assay or similar assay as described above. All tested compounds except Examples 6, 8, 9, 11, 17, 19, 28, 36, 40, 46, 50, 54, 55, 57, 58, 60, 69, 71, 79, 92, 97, 105, 1 10, 113, 132, 133, 142, 143, 145, 146, and 148 had over 100 fold selectivity between human recombinant Lp-PLA2 and PLA2 VIIB.
(3) Lipoprotein-associated phospholipase A2 (Lp-PLA2) Human Plasma assay (also referred to as "Thio-PAF assay")
The human plasma assay utilizes a thioester analog of PAF (phosphatidylcholine), where hydrolysis yields to the formation of a phospholipid containing a free thiol group. The amount of thiol is quantitated continuously by reacting with CPM (7-diethylamino-3-(4'-maleimidylphenyl)- 4-methyIcoumarin), a maleimide which increases in fluoresence after Michael addition of thiols. This assay may detect the activity of Lp-PLA2 in human plasma, as determined by specific inhibition by Lp-PLA2 inhibitors.
The thio-PAF assay was run as a quenched 15 μΐ assay. Compounds source plate was prepared by making 1 :3 (by volume) serial dilution of the compounds into pure DMSO on 384- well microplate. 0.01 μΐ, of compounds on compound source plate were transferred to 384 well Greiner 784076 (black) low-volume plates by ECHO liquid dispenser. 8 μΙ_, pooled human plasma, which was previously aliquoted and frozen, was added. Plates were centrifuged for 10 sec at 500 rpm. After 30 minutes preincubation, 2 of substrate solution comprising 2.5mM 2-thio-PAF [from ethanol stock], 32 μΜ CPM [from a DMSO stock] and 3.2 mM NEM (N-ethylmaleimide) [made fresh daily in DMSO] in assay buffer of 50mM HEPES, pH 7.4, 150 mM NaCl, 1 mM CHAPS was added to 384 well Greiner 784076 (black) low-volume plates by BRAVO liquid handling station. After 2 mins, reaction was quenched with 5 μΐ, of 5% aqueous trifluoroacetic acid (TFA). Plates were covered to protect from light and incubated for 40 min at room temperature. Plates were read at ex: 380 / em: 485 using-Envision microplate reader. pIC50 data, curve and QC analysis was conducted by using XLFit module in Excel.
All exemplified compounds of the present invention were tested in thio-PAF assay or similar assay as described above.
The pIC50 values in the thio-PAF assay for all compounds except examples 9, 10, 14, 27, 28, 32, 40, 46, 50, 55, 57, 58, 61 , 69, 71, 79, 92, 97, 110, 1 12, 113, 121 , 127, 132, 133, 135, 145, and 1 1 were at least 5.0.
The pICso values in the thio-PAF assay for examples 1-5, 7, 13, 15, 17, 18, 20, 24, 25, 29,
31 , 33-35, 37-39, 41, 42, 44, 45, 47, 49, 51 -53, 56, 59, 60, 62, 64-68, 70, 72, 73, 75-78, 80-89, 91 , 93-96, 99-104, 107-109, 1 1 1, 1 14-116, 1 18-120, 122-126, 128-131, 134, 136-141 , 144, 146, 147, 149 and 150 were at least 6.0.
The pIC50 values in the thio-PAF assay for examples 1 , 4, 5, 34, 44, 45, 49, 51 , 52, 59, 64, 65, 66, 67, 78, 80, 81, 83, 85-88, 91 , 93-96, 101 -103, 1 14- 1 16, 1 18-120, 122, 124, 125, 126, 128, 130, 131 , 134, 140, 144, 147 and 150 were at least 7.0. E. Methods of use
The compounds of this invention are inhibitors of Lp-PLA2. Therefore, these compounds may be used in therapy, for example, in the treatment of disorders associated with the activity of Lp-PLA2. Accordingly, another aspect of the invention is directed to methods of treating conditions associated with the activity of Lp-PLA2. As will be appreciated by those skilled in the art, a particular condition or its treatment may involve one or more underlying mechanisms associated with Lp-PLA2 activity, including one or more of the mechanisms described herein.
In some embodiments, an inhibitor of Lp-PLA2 according to the invention may be used in treating any of the disorders disclosed in the following published patent applications: W096/13484, W096/19451 , WO97/02242, W097/12963, W097/21675, W097/21676, WO 97/41098,
WO97/41099, WO99/24420, WO00/10980, WO00/66566, WO00/66567, WO00/68208,
WO01/60805, WO02/30904, WO02/30911, WO03/015786, WO03/016287, WO03/041712, WO03/042179, WO03/042206, WO03/042218, WO03/086400, WO03/87088, WO08/048867, US 2008/0103156, US 2008/0090851 , US 2008/0090852, WO08/048866, WO05/003118 CA
2530816A1), WO06/063811 , WO06/063813, WO 2008/141176, JP 200188847, US 2008/0279846 Al, US 2010/0239565 Al. and US 2008/0280829 Al .
In certain embodiments, the compounds of this invention may be used to treat any diseases that involve endothelial dysfunction, for example, atherosclerosis, (e.g. peripheral vascular atherosclerosis and cerebrovascular atherosclerosis), diabetes, hypertension, angina pectoris and after ischemia and reperfusion.
In certain embodiments, the compounds of the present invention may be used to treat any disease that involves lipid oxidation in conjunction with enzyme activity, for example, in addition to conditions such as atherosclerosis and diabetes, other conditions such as rheumatoid arthritis, stroke, inflammatory conditions of the brain such as Alzheimer's Disease, various neuropsychiatric disorders such as schizophrenia, myocardial infarction, ischaemia, reperfusion injury, sepsis, and acute and chronic inflammation.
In certain embodiments, the compounds of the present invention may be used to treat diseases that involve activated monocytes, macrophages or lymphocytes, as ail of these cell types express Lp-PLA2 including diseases involving activated macrophages such as Ml, dendritic and/or other macrophages which generate oxidative stress; exemplary disorder includes, but are not limited to, psoriasis, rheumatoid arthritis, wound healing, chronic obstructive pulmonary disease (COPD), liver cirrhosis, atopic dermatitis, pulmonary emphysema, chronic pancreatitis, chronic gastritis, aortic aneurysm, atherosclerosis, multiple sclerosis, Alzheimer's disease, and autoimmune diseases such as lupus. In certain embodiments, the present invention provides methods of treating a disease associated with the activity of Lp-PLA2, which comprises treating a subject in need thereof with an effective amount of an inhibitor of Lp-PLA2. The disease may be associated with the increased involvement of monocytes, macrophages or lymphocytes; with the formation of
lysophosphatidylcholine and oxidized free fatty acids; with lipid oxidation in conjunction with Lp- PLA2 activity; or with endothelial dysfunction.
In other embodiments, the compounds of the invention may be used for the primary or secondary prevention of acute coronary events, e.g. caused by atherosclerosis; adjunctive therapy in the prevention of restenosis; or delaying the progression of diabetic or hypertensive renal insufficiency. Prevention includes treating a subject at risk of having such conditions.
In certain embodiment, the compounds of the present invention may be used to treat the disease described herein in combination with an anti-hyperlipidaemic, anti-atherosclerotic, antidiabetic, anti-anginal, anti-inflammatory, or anti-hypertension agent or an agent for lowering Lipoprotein (a) (Lp(a)). Examples of the above include, but are not limited to, cholesterol synthesis inhibitors such as statins, anti-oxidants such as probucol, insulin sensitizers, calcium channel antagonists, and anti-inflammatory drugs such as non-steroidal anti-inflammatory Drugs (NSAIDs). Examples of agents for lowering Lp(a) include the aminophosphonates described in WO 97/02037, WO 98/28310, WO 98/28311 and WO 98/28312.
In one embodiment, the compounds of the present invention may be used with one or more statins. The statins are a well-known class of cholesterol lowering agents and include atorvastatin, simvarstatin, pravastatin, cerivastatin, fluvastatin, lovastatin and rosuvastatin. The two agents may be administered at substantially the same time or at different times, according to the discretion of the physician.
In a certain embodiment, the compounds of the present invention may be used with an anti- diabetic agent or an insulin sensitizer. In one embodiment, a compound of the present invention may be used with PPAR gamma activators, for instance GI262570 (Glaxo SmithKline) and the glitazone class of compounds such as rosiglitazone, troglitazone and pioglitazone.
In one embodiment, the compounds of the present invention may be used to treat a neurodegeneration disease in a subject. The methods comprise administering to a subject in need thereof a pharmaceutical composition comprising an agent that inhibits the activity of Lp-PLA2. Exemplary neurodegeneration diseases include, but are not limited to, Alzheimer's disease, vascular dementia, Parkinson's disease and Huntington's disease. In a certain embodiment, the neurodegeneration disease described herein is associated with an abnonnal blood brain barrier. In one embodiment, the subject which is administered an agent that inhibits the activity of Lp-PLA2 is a human. In one embodiment, the present invention provides methods of treating a subject with or at risk of vascular dementia. The methods comprise administering to the subject a pharmaceutical composition comprising an effective amount of a compound of the present invention. In a certain embodiment, the vascular dementia is associated with Alzheimer's disease.
In certain embodiments, the present invention provides methods of treating a neurological disorder associated with an abnormal blood brain barrier (BBB) function, inflammation, and/or microglia activation in a subject in need thereof. The methods comprise administering to the subject an effective amount of a compound of the present invention. In a further embodiment, the abnormal BBB is a permeable BBB. In yet a further embodiment, the disease is a
neurodegeneration disease. Such neurodegeneration diseases are, for example, but are not limited to, vascular dementia, Alzheimer's disease, Parkinson's disease and Huntington's disease. In one embodiment, the present invention provides methods of treating disease associated with a subject with blood brain barrier (BBB) leakage. Exemplary diseases include, but are not limited to, brain hemorrhage, cerebral amyloid angiopathy. In one embodiment, the neurodegeneration disease is Alzheimer's disease. In a certain embodiment, the neurodegeneration disease is vascular dementia. In one embodiment, the neurodegeneration disease is multiple sclerosis (MS).
In certain embodiments, the present invention provides methods of decreasing beta amyloid, referred to as "Αβ" accumulation in the brain of a subject. The methods comprise administering to a subject in need thereof a pharmaceutical composition comprising an effective amount of a compound of the present invention. In a further embodiment, the beta amyloid is Abeta-42.
In certain embodiments, when a subject is administered an effective amount of a compound of the present invention, the methods may further comprise administering to the subject another therapeutic agent that may be useful in treating the neurodegenerative disease for which the subject is being treated, or that may be a co-morbidity. For example, when the neurodegenerative disease is similar to Alzheimer's disease, the subject may be treated with other agents targeting Alzheimer's disease such as AR1CEPT® or donepezil, COGNEX® or tacrine, EXELON® or rivastigmine, REMINYL® or galantamine, anti-amyloid vaccine, Abeta-lowering therapies, mental exercise or stimulation.
In certain embodiments, the present invention relates to methods of treating metabolic bone diseases by administering to the subject in need thereof an effective amount of a compound of the present invention. Exemplary metabolic bone diseases include, diseases associated with loss of bone mass and density including, but are not limited to, osteoporosis and osteopenic related diseases. Exemplary osteoporosis and osteopenic related diseases include, but are not limited to, bone marrow abnormalities, dyslipidemia, Paget's diseases, type II diseases, metabolic syndrome, insulin resistance, hyperparathyroidism and related diseases. In a further embodiment, the subject in need thereof is a human.
It is believed that methods of preventing osteoporosis and/or osteopenic diseases described herein may be affected by inhibiting the expression of Lp-PLA2 and/or inhibiting the protein activity of Lp-PLA2. Accordingly, some embodiments of the present invention provide methods for inhibiting Lp-PLA2 by blocking enzyme activity. In a further embodiment, methods for inhibiting Lp-PLA2 by reducing and/or down-regulating the expression of Lp-PLA2 RNA are provided. In a further embodiment, preventing and/or reducing loss of bone mass and/or loss of bone density leads to preventing or reducing symptoms associated with metabolic bone diseases such as osteoporosis and or osteopenic diseases.
In certain embodiments, the methods further comprise administering to a subject in need thereof additional therapeutic agents used in the treatment of metabolic bone diseases. For example, when the metabolic bone disease is osteoporosis additional therapeutic agents such as bisphosphates (e.g., alendronate, ibandromate, risedronate, calcitonin, raloxifene, a selective estrogen modulator (SERM), estrogen therapy, hormone replacement therapy (ET/HRT) and teriparatide) may be used.
One aspect of the present invention provides methods for treating eye diseases by administering an effective amount of a compound of the present invention. Eye diseases applicable in the present invention may be associated with the breakdown of the inner blood-retinal barrier (iBRB). Exemplary eye diseases relate to diabetic eye diseases and disorders, which includes macular edema, diabetic retinopathy, and the like. Further, in one embodiment, the present invention relates to methods for treating eye diseases by administering a compound of the present invention to inhibit Lp-PLA2. Exemplary eye diseases include, but are not limited to, central retinal vein occlusion, branched retinal vein occlusion, Irvine-Gass syndrome (post cataract and post-surgical), retinitis pigmentosa, pars planitis, birdshot retinochoroidopathy, epiretinal membrane, choroidal tumors, cystic macular edema, parafoveal telengiectasis, tractional maculopathies, vitreomacular traction syndromes, retinal detachment, neuroretinitis, idiopathic macular edema, and the like.
Further, some embodiments of the present invention provide methods for treating diabetic macular edema in a subject. The method comprises administering to a subject in need thereof an effective amount of a compound of the present invention.
In certain embodiments, the present invention provides methods of treating a subject with or at risk of macular edema. The methods comprise administering to the subject an effective amount of a compound of the present invention. In a further embodiment, the macular edema is associated with diabetic eye disease, for example, diabetic retinopathy. In yet a further embodiment, the macular edema is associated with posterior uveitis. In certain embodiments, the present invention provides methods of treating glaucoma or macular degeneration. The methods comprise administering to the subject an effective amount of a compound of the present invention.
In one embodiment, the present invention provides methods of treating a disease associated with the breakdown of the inner blood-retinal barrier in a subject in need thereof. The methods comprise administering to the subject an effective amount of a compound of the present invention.
In one embodiment, systemic inflammatory diseases such as, juvenile rheumatoid arthritis, inflammatory bowel disease, Kawasaki disease, multiple sclerosis, sarcoidosis, polyarteritis, psoriatic arthritis, reactive arthritis, systemic lupus erythematosus, Vogt-Koyanagi-Harada syndrome, Lyme disease, Bechet's disease, ankylosing sponsylitis, chronic granulomatous disease, enthesitis, may be the underlying cause of posterior uveitis affecting the retina, and which can result in macula edema. The present invention relates to methods for treating posterior uveitis or any of these systemic inflammatory diseases by administering an effective amount of a compound of the present invention.
It is believed that Lp-PLA2 inhibitors may have beneficial effects on indications associated with M1/M2 macrophage polarization. The belief is based on the following studies. A study was carried out by GSK to investigate the relationship between M1/M2 macrophage polarization and different diseases. 94 human markers described in Martinez FO et al., which distinguished Ml and M2 phenotypes was used against a GSK subscribed GeneLogic database. (See Martinez FO et al. (2006) J Immunol 177, 7303-7311.) The Connectivity Map methodology described in Lamb J et al. was used to identify the fraction of samples in each disease state having expression characteristics consistent with a Ml -favoring or M2-favoring macrophage population. See Lamb J et al. (2006) Science 313, 1929-1935) (PMID 17008526)). The study showed that liver cirrhosis, skin psoriasis, atopic dermatitis, pulmonary emphysema, chronic pancreatitis, chronic gastritis, and aortic aneurysm have M1/M2 imbalance.
A further study was carried out to study the impact of Lp-PLA2 inhibitors on modulating M1 M2 imbalance. In this study, rats were induced to develop experimental autoimmune encephalomyelitis (EAE) by immunization with myelin basic protein (MBP) antigen and treated with a known Lp-PLA2 inhibitor: 5-((9-Methoxy-4-oxo-6;7-dihydro-4H-pyrimido[6,l- a]isoquinolin-2-yl)oxy)-2-(3-(trifluoromethyl)phenoxy)benzonitrile (See PCT application no.
PCT/CN201 1/001597). In this preventive treatment model, the compound was administered at day 0 (day of immunization) and continued to administer until day 22. The study lasted for 25 days. Rats were subsequently monitored for symptoms of EAE. Rats were immunized with MBP to develop EAE and symptoms were monitored daily. Plasma Lp-PLA2 activity, OxLDL, and LysoPC concentration were determined at different time points through the course of EAE. The results showed that plasma Lp-PLA2 activity, OxLDL, and LysoPC concentrations increased as the clinical EAE disease progressed in the model, winch indicates that they played a role in the pathology development. Lp-PLA2 inhibitor treatment led to reduction in clinical disease associated with decreased Lp-PLA3 activity and LysoPC levels in rat EAE plasma. Hence, inhibition of Lp- PLA2 activity is beneficial in ameliorating disease in the rat EAE model.
Ex vivo analysis of proinflammatory (Ml) and anti-inflammatory (M2) markers in control and compound treated EAE rats. Splenic macrophages were harvested at day 13 post MBP- immunization and assayed for expression of a variety of markers by realtime PCR. CNS infiltrating cells were harvested and macrophages were analyzed for expression of Ml and M2 markers by realtime PCR. Treatment with compound resulted in the decrease in Ml markers and increase in M2 markers, which potentially indicated the possibility of anti-inflammation and tissue repair.
Therefore, in certain embodiments, the present invention provides methods of treating disease associated with macrophage polarization, for example, M1/M2 macrophage polarization. Exemplary diseases associated with macrophage polarization include, but are not limited to, liver cirrhosis, skin psoriasis, atopic dermatitis, pulmonary emphysema, chronic pancreatitis, chronic gastritis, aortic aneurysm, atherosclerosis, multiple sclerosis, and other autoimmune diseases that are associated with macrophage polarization.
One aspect of the present invention provides the use of a compound of the present invention for the preparation of a medicament for carrying out a method described herein. Another aspect of the present invention provides a compound of the present invention for use in carrying out methods of treatment described herein. A further aspect of the present invention provides a compound described herein or a pharmaceutically acceptable salt thereof, for use in therapy.
F. Composition
The compounds of the present invention may be formulated into pharmaceutical compositions prior to administration to a subject. Accordingly, one aspect of the invention is directed to pharmaceutical compositions comprising a compound of the invention and one or more pharmaceutically-acceptable excipients. In accordance with another aspect of the invention, a process is provided for the preparation of a pharmaceutical composition including admixing a compound of the Formula (I), Formula (IA), Formula (IB), or salts thereof, solvates etc thereof, with one or more pharmaceutically acceptable excipient.
Pharmaceutical compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose. Such a unit may contain, for example, 0.1 mg, 0.5 mg, or 1 mg to 50 mg, 100 mg, 200 mg, 250 mg, 500 mg, 750 mg or lg of a compound of the present invention, depending on the condition being treated, the route of administration and the age, weight and condition of the subject, or pharmaceutical compositions may be presented in unit dose forms containing a predetermined amount of active ingredient per unit dose. In other embodiments, the unit dosage compositions are those containing a daily dose or sub-dose as described herein, or an appropriate fraction thereof, of an active ingredient. Furthermore, such pharmaceutical compositions may be prepared by any of the methods well-known to one skilled in the art.
An effective amount of a compound of the present invention will depend upon a number of factors including, for example, the age and weight of the intended recipient, the precise condition requiring treatment and its severity, the nature of the formulation, and the route of administration, and will ultimately be at the discretion of the attendant prescribing the medication. However, an effective amount of a compound of present invention for the treatment of anemia will generally be in the range of 0.1 to 100 mg/kg body weight of recipient per day and more usually in the range of 1 to 10 mg kg body weight per day. Thus, for a 70kg adult mammal, the actual amount per day would usually be from 70 to 700 mg and this amount may be given in a single dose per day or in a number of sub-doses per day as such as two, three, four, five or six doses per day. Or the dosing can be done intermittently, such as once every other day, once a week or once a month. An effective amount of a salt or solvate, etc., may be determined as a proportion of the effective amount of the compound of Formula (I), Formula (IA), or Formula (IB) per se. It is envisaged that similar dosages would be appropriate for treatment of the other conditions referred to above.
The pharmaceutical compositions of the invention may contain one or more compounds of the invention. In some embodiments, the pharmaceutical compositions may contain more than one compound of the invention. For example, in some embodiments, the pharmaceutical compositions may contain two or more compounds of the invention. In addition, the pharmaceutical
compositions may optionally further comprise one or more additional pharmaceutically active compounds.
As used herein, "pharmaceutically-acceptable excipient" means a pharmaceutically acceptable material, composition or vehicle involved in giving form or consistency to the pharmaceutical composition. Each excipient may be compatible with the other ingredients of the pharmaceutical composition when commingled such that interactions which would substantially reduce the efficacy of the compound of the invention when administered to a subject and interactions which would result in pharmaceutical compositions that are not pharmaceutically acceptable are avoided.
The compounds of the invention and the pharmaceutically-acceptable excipient or excipients may be formulated into a dosage form adapted for administration to the subject by the desired route of administration. For example, dosage forms include those adapted for (1) oral administration (including buccal or sublingual) such as tablets, capsules, caplets, pills, troches, powders, syrups, elixers, suspensions, solutions, emulsions, sachets, and cachets; (2) parenteral administration (including subcutaneous, intramuscular, intravenous or intradermal) such as sterile solutions, suspensions, and powders for reconstitution; (3) transdermal administration such as transdermal patches; (4) rectal administration such as suppositories; (5) nasal inhalation such as dry powders, aerosols, suspensions, and solutions; and (6) topical administration (including buccal, sublingual or transdermal) such as creams, ointments, lotions, solutions, pastes, sprays, foams, and gels. Such compositions may be prepared by any methods known in the art of pharmacy, for example by bringing into association a compound of Formula (I), Formula (IA), or Formula (IB) with the carrier(s) or excipient(s).
Pharmaceutical compositions adapted for oral administration may be presented as discrete units such as capsules or tablets; powders or granules; solutions or suspensions in aqueous or non- aqueous liquids; edible foams or whips; or oil-in-water liquid emulsions or water-in-oil liquid emulsions.
Suitable pharmaceutically-acceptable excipients may vary depending upon the particular dosage form chosen. In addition, suitable pharmaceutically-acceptable excipients may be chosen for a particular function that they may serve in the composition. For example, certain
pharmaceutically-acceptable excipients may be chosen for their ability to facilitate the production of uniform dosage forms. Certain pharmaceutically-acceptable excipients may be chosen for their ability to facilitate the production of stable dosage forms. Certain pharmaceutically-acceptable excipients may be chosen for their ability to facilitate carrying or transporting the compound or compounds of the invention once administered to the subject from an organ, or a portion of the body, to another organ, or a portion of the body. Certain pharmaceutically-acceptable excipients may be chosen for their ability to enhance patient compliance.
Suitable pharmaceutically-acceptable excipients include the following types of excipients: diluents, fillers, binders, disintegrants, lubricants, glidants, granulating agents, coating agents, wetting agents, solvents, co-solvents, suspending agents, emulsifiers, sweeteners, flavoring agents, flavor masking agents, coloring agents, anticaking agents, hemectants, chelating agents, plasticizers, viscosity increasing agents, antioxidants, preservatives, stabilizers, surfactants, and buffering agents. The skilled artisan will appreciate that certain pharmaceutically-acceptable excipients may serve more than one function and may serve alternative functions depending on how much the excipient is present in the formulation and what other ingredients are present in the formulation.
Skilled artisans possess the knowledge and skill in the art to enable them to select suitable pharmaceutically-acceptable excipients in appropriate amounts for use in the invention. In addition, there are a number of resources that are available to the skilled artisan which describe
pharmaceutically-acceptable excipients and may be useful in selecting suitable pharmaceutically- acceptable excipients. Examples include Remington's Pharmaceutical Sciences (Mack Publishing Company), The Handbook of Pharmaceutical Additives (Gower Publishing Limited), and The Handbook of Pharmaceutical Excipients (the American Pharmaceutical Association and the Pharmaceutical Press).
The pharmaceutical compositions of the invention are prepared using techniques and methods known to those skilled in the art. Some of the methods commonly used in the art are described in Remington's Pharmaceutical Sciences (Mack Publishing Company).
In one aspect, the invention is directed to a solid oral dosage form such as a tablet or capsule comprising an effective amount of a compound of the invention and a diluent or filler. Suitable diluents and fillers include lactose, sucrose, dextrose, mannitol, sorbitol, starch (e.g. corn starch, potato starch, and pre-gelatinized starch), cellulose and its derivatives (e.g. microcrystalline cellulose), calcium sulfate, and dibasic calcium phosphate. The oral solid dosage form may further comprise a binder. Suitable binders include starch (e.g. corn starch, potato starch, and pre- gelatinized starch), gelatin, acacia, sodium alginate, alginic acid, tragacanth, guar gum, povidone, and cellulose and its derivatives (e.g. microcrystalline cellulose). The oral solid dosage form may further comprise a disintegrant. Suitable disintegrants include crospovidone, sodium starch glycolate, croscarmelose, alginic acid, and sodium carboxymethyl cellulose. The oral solid dosage form may further comprise a lubricant. Suitable lubricants include stearic acid, magnesium stearate, calcium stearate, and talc.
In certain embodiment, the present invention is directed to a pharmaceutical composition comprising 0.01 to 1000 mg of one or more compounds described herein or a pharmaceutically acceptable salt thereof and 0.01 to 5 g of one or more pharmaceutically acceptable excipients.
In another embodiment, the present invention is directed a pharmaceutical composition for the treatment of neurodegeneration disease comprising a compound described herein or a pharmaceutically acceptable salt thereof.

Claims

WHAT IS CLAIMED IS:
1. A compound of Formula (I) or a pharmaceutically acceptable salt thereof,
Figure imgf000162_0001
Formula (I) wherein:
R is H or CrC6alkyl,
R' is H, halo, or C,-C6alkyl,
X is -0-, -NH-, -N(C C6alkyl)-, -S- or -CH2-,
n is 0, 1 , 2 or 3, and when X is ~CH2-, n is 1 or 2,
Ar is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of -CN, halo, OH, -NH2, -NHRi, -NRtR2, Ci-C6alkyl, Ci-Cealkoxy, and C]-C6haloalkyl, and
Y is absent or -O-Ar', -NH-Ar', -Nfd-Qalkyli-Ar', or -(C¾)-Ar%
wherein Ar' is phenyl or heteroaryl, either of which is unsubstituted or substituted with one or more groups selected from the group consisting of CN, halo, OH, -NH2; -NHRi, -NR^, Cr Cealkyl, Q-Cgalkoxy, and Ci-Cehaloalkyl, and
each occurrence of Ri and R2 are independently C C6 alkyl.
2. A compound of claim 1 , wherein R is methyl or H.
3. A compound of claim 1 or claim 2, wherein R' is H.
4. A compound of any of claims 1 to 3, wherein X is -0-.
5. A compound of any of claims 1 to 4, wherein n is 1.
6. A compound of any of claims 1 -5, wherein Ar is phenyl, which is optionally substituted with one or more groups independently selected from the group consisting of -F and -CN.
7. A compound of any of claims 1 to 6, wherein Y is -O-Ar', and Ar' is phenyl which is substituted with one or more groups independently selected from the group consisting of CF3, F and CI or Ar' is pyridinyl, which is substituted with one or more groups independently selected from the group consisting of CN and CF3.
8. A compound of claim 1, wherein the compounds of Formula (I) has the structure of Formula (IA
Figure imgf000163_0001
Formula (IA)
wherein, R, R', X, and n are defined in claim 1, Ra, Rb and Rc are independently selected from the group consisting of H, halo, CF3 and CN,
or a pharmaceutically acceptable salt thereof.
9. A compound of claim 1 , wherein the compounds of Formula (I) has the structure of Formula (IB),
Figure imgf000164_0001
Formula (IB) wherein, R, R', X, and n are defined in claim 1, Rd Re and Rf are independently selected from the group consisting of H, halo, and CF3,
or a pharmaceutically acceptable salt thereof.
A compound of either claim 8 or 9, wherein R is methyl.
11. A compound of any of claims 8 to 10, wherein R' is H.
12. A compound of any of claims 8 to 11 , wherein X is -0-.
13. A compound of any of claims 8 to 12, wherein n is 1.
A pharmaceutical composition comprising a compound of Formula (I) as defined in any one of claims 1-13 or a pharmaceutically acceptable salt thereof, and one or more pharmaceutically acceptable excipients.
15. A method for treating a neurodegeneration disease in a subject comprising administering to the subject in need thereof an effective amount of a compound of Formula (I) as defined in any one of claims 1-13 or a pharmaceutically acceptable salt thereof.
The method of claim 15, wherein the neurodegeneration disease is Alzheimer's disease.
17. A method for treating atherosclerosis in a subject in need thereof comprising administering to a subject an effective amount of a compound of Formula (I) as defined in any one of claims 1-13 or a pharmaceutically acceptable salt thereof.
18. The method according to any of claims 15-17, wherein the subject is human.
19. A use of a compound as defined in any of claims 1 to 13, or a pharmaceutically acceptable salt thereof, in the manufacture of a medicament for treating a disease defined in any one of claims 15 to 18.
20. A compound defined in any one of claims 1 to 13 or a pharmaceutically acceptable salt thereof for use in the treatment defined in any of claims 15 to 18.
A compound defined in any one of claims 1 to 13 or a pharmaceutically acceptable salt thereof for use in therapy.
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