WO2011049409A9 - Mannose 6-phosphate isomerase, mutants thereof, and use thereof - Google Patents
Mannose 6-phosphate isomerase, mutants thereof, and use thereof Download PDFInfo
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- WO2011049409A9 WO2011049409A9 PCT/KR2010/007295 KR2010007295W WO2011049409A9 WO 2011049409 A9 WO2011049409 A9 WO 2011049409A9 KR 2010007295 W KR2010007295 W KR 2010007295W WO 2011049409 A9 WO2011049409 A9 WO 2011049409A9
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Definitions
- the present invention relates to a novel mannose 6-phosphate isomerase, a mutant enzyme and a method for producing el-ribose using the enzyme, and more particularly mannose-6-phosphate isomerization.
- Recombinant expression vectors comprising the enzyme, the mutant enzyme and the corresponding gene, microorganisms transformed therewith, and methods for producing the mannose-6-phosphate isomerase or its mutants in large quantities using the same and the mannose-6-phosphate
- the present invention relates to a production method for obtaining el-ribose in high yield using an isomerase or a mutant thereof.
- L-ribose is the starting material for the synthesis of many L-type saccharide drugs, the antiviral methyl-L-riboflanoside ("Bezimidavir” TM). ), And the global market for el-ribose and its derivatives was about $ 1.1 billion in 2001.
- non-double oil 1263 double oil 94 (BW1263W94, Glaxo Wellcome), which has recently been developed as a new anti-herpes drug
- L-FMAU Bukwang & Triangle
- L-ribose has been produced by chemical synthesis mainly from L-arabinose, L-xylose, di-glucose, di-galactose, di-ribose or di-manno-1,4-lactone (Akagi, M., et. al., Chem. Pharm. Bull. (Tokyo) 50: 866, 2002; Takahashi, H., et al., Org. Lett. 4: 2401, 2002; Yun, M., et al., Tetrahedron Lett. 46 : 5903, 2005).
- this chemical synthesis method has several serious problems in its production process.
- El-biological production research method is keulribiji Ella pneumoniae (Klebsiella pneumonia) derived arabinose isomerase, Pseudomonas shoe Cherry (Pseudomonas stutzeri) derived from rhamnose isomerase (L-rhamnose isomerase) of ribose, Streptomyces Ruby Geonosis (Streptomyces rubiginosus) derived from xylose isomerase (D-xylose isomease) and Lactococcus lactis Cocos (Lactococcus lactis) derived from galactose-6-phosphate isomerase, but using the enzyme (galactose-6-phosphate isomerase) , the enzyme They have a broad substrate specificity that can convert El-Riblos to El-Ribose, but their conversion is very slow.
- mannose-6-phosphate isomerase derived from Bacillus subtilis Yeom SJ, et al. , Appl. Environ.Microbiol. 75: 4705, 2009.
- mannose-6-phosphate isomerase derived from Bacillus subtilis is an enzyme derived from mesophilic bacteria and has a limitation in dissolving a large amount of substrate because of low thermal stability and low reaction temperature. Therefore, in order to overcome this, it is urgent to develop economical biological methods that have high L-ribose productivity, high thermal stability, and overcome the limitations of substrate solubility.
- the present invention solves the above problems and the object of the present invention is to provide a novel mannose-6-phosphate isomerase.
- Another object of the present invention is to provide a mutant of the novel mannose-6-phosphate isomerase.
- Still another object of the present invention is to provide a method of preparing the mannose-6-phosphate isomerase.
- Still another object of the present invention is to provide a method of preparing a mutant of the mannose-6-phosphate isomerase.
- Another object of the present invention is to provide a method for producing high yield of el-ribose.
- the present invention provides a mannose-6-phosphate isomerase used in the production of L-ribose.
- the mannose-6-phosphate isomerase is it not limited thereto preferably one derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) or geo Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) strains .
- the isomerization enzyme preferably has an amino acid sequence of SEQ ID NO: 1 or 2, but induces one or more mutations in these sequences to have mannose-6-phosphate isomerase activity of the present invention. All mutant enzymes are included in the scope of the present invention,
- mutant enzymes include, but are not limited to:
- the amino acids of residues 21, 74, and 134 of 6-phosphate isomerase were respectively converted to glutamic acid (E), threonine (T), and arginine (R) in lysine (K), asparagine (N), and methionine (M), respectively.
- the mutant of g) comprises an alanine (N) as the amino acid of residue 90 of the mannose 6-phosphate isomerase of SEQ ID NO: 2
- N alanine
- Preferred is, but is not limited to, a mannose 6-phosphate isomerase mutant converted to A) and the amino acid of residue 129 converted from leucine (L) to phenylalanine (F).
- the present invention also provides a gene encoding the enzyme of the present invention.
- the gene preferably has a nucleotide sequence of any one of SEQ ID NO: 3 or 4, but having a homology of 80% or more with these nucleotide sequences in consideration of the degeneracy of the genetic code, etc.
- All genes having functional mannose-6-phosphate isomerase activity or functional fragments thereof for the purpose of the present invention are also included in the scope of the present invention, and examples thereof include, but are not limited to, the nucleotide sequences set forth in SEQ ID NOs: 5 to 12. No.
- the present invention also provides a recombinant expression vector comprising a mannose-6-phosphate isomerase gene having a nucleotide sequence of any one of SEQ ID NO: 3 to SEQ ID NO: 12.
- the recombinant expression vector is preferably an expression vector pET 28 (+) a / mannose-6-phosphate isomerase or pTrc 99a / mannose-6-phosphate isomerase, but is not limited thereto.
- the present invention a) culturing the microorganism transformed with the expression vector of the present invention
- the present invention also provides a method for producing el-ribose using the mannose-6-phosphate isomerase or a mutant thereof of the present invention.
- the present invention also provides a composition for producing ribose comprising the mannose 6-phosphate isomerase of the present invention or a mutant thereof.
- the mannose-6-phosphate isomerase gene of the present invention is isolated from Thermos thermophilus or Geobacilli thermodinitripicans strain.
- chromosomal DNA is obtained from a Thermos thermophilus or Geobacillus thermodinitripicans strain with a mannose-6-phosphate isomerase gene.
- PCR polymerase chain reaction
- the PCR amplification fragment thus obtained is a fragment having a homology close to 100% to the mannose-6-phosphate isomerase gene of the Thermos thermophilus or Geobacilli thermodinititripicans strain, and colony hybridi. A high S / N ratio can be expected as a probe at the time of aging, and the stringency control of hybridization is facilitated.
- the PCR amplification fragments are labeled with appropriate reagents, and colony hybridization is performed on the chromosomal DNA library to select mannose-6-phosphate isomerase genes (Current Protocols in Molecular Biology, Vol. 1, p. 603). , 1994).
- the DNA fragment containing the mannose-6-phosphate isomerase gene was obtained by recovering the plasmid from the E. coli selected by the above method using alkaline method (Current Protocols in Molecular Biology, Vol. 1, p. 161, 1994). Can be. After determining the nucleotide sequence by the above method, it is possible to obtain the entire gene of the present invention by hybridizing the DNA fragment prepared by digestion by restriction enzymes of the DNA fragment having the nucleotide sequence as a probe.
- the transformed microorganism of the present invention is obtained by introducing the recombinant vector of the present invention into a host suitable for the expression vector used when producing the recombinant vector.
- a host suitable for the expression vector used when producing the recombinant vector for example, when a bacterium such as E. coli is used as a host, the recombinant vector according to the present invention is capable of autonomous replication in the host, and at the same time, a DNA containing a promoter, mannose-6-phosphate isomerase gene, and transcription. It is preferable to have a structure required for expression of the termination sequence.
- pET 28 (+) a or pTrc 99a was used, but any expression vector satisfying the above requirements can be used.
- Production of the mannose-6-phosphate isomerase mutant comprises culturing a transformant obtained by transforming a host with a recombinant vector having a gene encoding the same, and culturing the transformant into a culture (cultured cell or culture supernatant). It is performed by generating and accumulating mannose-6-phosphate isomerase, which is a gene product, and acquiring the enzyme from the culture.
- Acquisition and purification of the mannose-6-phosphate isomerase of the present invention is carried out by centrifuging the cells or supernatants from the cultures obtained, followed by cell disruption, affinity chromatography, cation or anion exchange chromatography, or the like. It can carry out by combining.
- the present invention provides a mannose-6-phosphate isomerase or a mutant thereof and a recombinant expression vector comprising the corresponding gene, a microorganism transformed therewith and a method for producing a large amount of mannose-6-phosphate isomerase using these, and the mannose It is effective to provide a production method for obtaining high yield of L-ribose using -6-phosphate isomerase.
- the mannose-6-phosphate isomerase of the present invention can produce a high yield of ribose, which is a raw material of medicines by a high specificity and environmentally friendly method, and the produced L-ribose starts the synthesis of medicines per sugar of various L-type nucleic acids. It can be usefully used as a substance.
- Figure 1 shows the enzymatic activity of the metal ion species of mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain of the present invention
- Figure 2 shows the enzyme activity of the metal ion concentration .
- Figure 3 shows the enzyme activities of the pH of the mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strains of the invention ( ⁇ : PIPES buffer; ⁇ : EPPS buffer), 4 temperature It shows the enzyme activity according to.
- Thermo filler scan shows the temperature stability of the measurement results of the mannose-6-phosphate isomerase derived from (Thermus thermophilus) strain ( ⁇ of the present invention: 65 °C; ⁇ : 70 °C ; ⁇ : 75 °C; ⁇ : 80 ° C. and ⁇ : 85 ° C.).
- Figure 6 is a mannose-6-phosphate isomerase of El derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain according to the invention shows the hourly production of ribose.
- Figure 7 shows the conversion of ribose by a mannose-6-phosphate isomerase and the mutant enzyme (closed circle) derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strains of the invention in a substrate concentration 10 Mm.
- Figure 8 shows a gene sequence of the mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain of the present invention.
- Figure 9 shows the gene sequence of the mutant enzyme R142N of mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain of the present invention.
- Figure 10 shows the cleavage map of a recombinant expression vector containing the gene of the mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain of the present invention.
- Figure 11 shows in comparison an enzyme activity according to the kind of the inorganic salt Geo Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) a mannose-6-phosphate isomerase derived from a strain of the present invention.
- Figure 13 shows in comparison an enzyme activity according to the pH of geo Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) a mannose-6-phosphate isomerase derived from a strain of the present invention.
- Figure 14 illustrates in comparison the enzyme activity according to the temperature of the thermopile di Gio Bacillus NITRY pecan switch (Geobacillus thermodenitrificans) a mannose-6-phosphate isomerase derived from a strain of the present invention.
- Figure 15 shows the stability measurement in accordance with the temperature of the thermopile di Gio Bacillus NITRY pecan switch (Geobacillus thermodenitrificans) a mannose-6-phosphate isomerase derived from a strain of the present invention.
- Figure 16 shows the production of ribose by a mannose-6-phosphate isomerase derived from Bacillus Geo Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) strains of the invention in a substrate concentration 300g / l.
- Figure 17-21 are geo Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) Mutant 1 (18), which are mutant enzymes of the mannose-6-phosphate isomerase (Fig. 17) derived from a strain of the present invention, Mutant 2 (FIG. 19), the gene sequences of Mutant 3 (FIG. 20), and Mutant 4 (FIG. 21) are shown.
- FIG. 22 is an illustration showing a cleavage map of the expression vector containing the gene of the mannose-6-phosphate isomerase derived from Bacillus Geo Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) strain.
- FIG. 23-24 show the relative activities of the point mutants compared to the wild type of amino acid residues 90 (FIG. 23) and 129 (FIG. 24) substitution point mutants.
- Figure 25 shows the relative activity of amino acids residues 90 and 129 of the mannose-6-phosphate isomerase of the present invention compared to the wild type of single and double mutant enzymes.
- mannose-6-phosphate isomerase In order to produce a mannose-6-phosphate isomerase of the present invention, a mannose-6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain it was first separated.
- Thermos Thermophilus KCCM 40897 strain in which the gene sequence and the amino acid sequence are already specified, is selected, and a known DNA sequence (Genebank Accession No. AP008226) of mannose-6-phosphate isomerase derived therefrom is selected. On the basis of the following primers were devised.
- SEQ ID NO: 14 (Reverse primer): 5'-TTT GAATTC ACTCACGCCCCCTCCTT-3 '
- the primers were designed with Nde I and EcoR I restriction enzyme cleavage portions, respectively, and amplified the nucleotide sequence of the gene by polymerase chain reaction (PCR).
- the recombinant expression vector thus obtained is transformed into E. coli ER 2566 strain by a conventional transformation method, the transformed microorganism is cultured for the production of L-ribose by adding 20% glycerin (glycerine) solution Frozen before.
- Mannose-6-phosphate for the production of isomerase and separating the geo Bacillus Thermo di NITRY pecan's one mannose-6-phosphate isomerase derived from (Geobacillus thermodenitrificans) strains before.
- SEQ ID NO: 15 (Forward primer): 5'-TTT GAATTC ATGCATCAAGAACCGATTTTTC-3 '
- SEQ ID NO: 16 (Reverse primer): 5'-TTT AAGCTT TTATTTGCTTGTCCGTGG-3 '
- the primers of the mannose-6-phosphate isomerase gene were designed with EcoR I and Hind III restriction enzyme cleavage portions. PCR was performed using the primers to amplify the nucleotide sequence of the gene. A large amount of mannose-6-phosphate isomerase gene was inserted into the plasmid vector pTRC 99a (Novagen) using each restriction enzyme to prepare pTRC 99a / mannose-6-phosphate isomerase.
- the recombinant expression vector thus obtained was transformed into E. coli ER 2566 strain by a conventional transformation method.
- the transformed microorganism was stored frozen before the culture for the production of ribose by adding a 20% glycerin (glycerine) solution.
- the frozen E. coli ER 2566 strain was inoculated into a test tube containing 3 ml of LB medium, and the absorbance was 2.0 at 600 nm.
- the spawn culture was performed with a shake incubator at 37 ° C. until. Then, the seed cultured culture was added to a 2,000 ml flask containing 500 ml of LB medium to carry out the main culture.
- the mannose-6-phosphate isomerase produced by overexpression as described above the culture medium of the transformed strain was washed twice with 0.85% sodium chloride (NaCl) by centrifugation at 6,000 ⁇ g for 30 minutes at 4 °C. Next, 50 mM sodium phosphate, 300 mM sodium chloride, 10 mM imidazole and 0.1 mM protease inhibitor (phenylmethylsulfonyl fluoride) were added to disrupt the cell solution with a sonicator.
- NaCl sodium chloride
- protease inhibitor phenylmethylsulfonyl fluoride
- the cell lysate was again centrifuged at 13,000 ⁇ g for 20 minutes at 4 ° C., the cell pellet was removed, and only the cell supernatant was obtained for a fast protein liquid chromatography system (Bio-Rad Laboratories, Hercules, CA, USA). Histrap HP adsorption column using His-tag was used as an enzyme solution for the production of L-ribose.
- Example 2 In order to investigate the specificity of mannose-6-phosphate isomerase obtained in Example 2 for metal ions, the activity of the enzyme was treated with 10 mM EDTA, and metal ions (Mn 2+ , Zn 2+ , Ba 2+ , Cu). 2+ , Co 2+ , Ca 2+ , Mg 2+ , Ni 2+ , Fe 2+ ) and the reaction was measured as follows.
- Enzyme reaction was performed using 50 mM PIPES (piperazine- N, N' -bis (2-ethane sulfonic acid)) buffer solution (pH 7.0) containing 10 mM L-ribulose, each metal ion and 0.05 unit / ml enzyme. 5 minutes at 75 ° C, and the reaction was stopped again by adding a final concentration of 200 mM hydrogen chloride (HCl).
- PIPES piperazine- N, N' -bis (2-ethane sulfonic acid)
- the enzyme activity was measured using L-ribulose as a substrate, and the enzyme activity (unit) of the enzyme activity was defined as the amount to produce 1 ⁇ mol of L-ribose per minute at pH 7.0 and 75 ° C. It was.
- the concentration of ribose and ribulose, and the analysis of other sugars in the determination of enzymatic activity can be determined by using a bio-liquid chromatography (Bio-LC) system equipped with an electrochemical detector and a CarboPacPA column ( Dionex ICS-3000, Sunnylvale, Calif., USA), wherein the Carbopack PA column was passed 200 mM sodium hydroxide (NaOH) at 1 ° C./min at 30 ° C.
- Bio-LC bio-liquid chromatography
- CarboPacPA column Dionex ICS-3000, Sunnylvale, Calif., USA
- Thermos Thermofiller ( Thermus thermophilus ) Mannose-6-phosphate isomerase derived from 2+ ) was the most effective, and the optimal concentration was 0.5mM.
- Geobacillus Thermodinitripicans (Geobacillus) of thermodenitrificans) Ribose isomerase by mannose-6-phosphate isomerase is cobalt (Co 2+ ) was the most effective, and the optimum concentration of the metal salt for enzyme was 1 mM.
- the mannose-6-phosphate isomerase of the present invention was shown to be affected by copper or cobalt metal ions, confirming that it is an enzyme dependent on metal ions (see FIGS. 1, 2, 11, and 12).
- Example 1 In order to investigate the activity of the mannose-6-phosphate isomerase obtained in Example 1 according to the pH and temperature change, the enzyme and the substrate were reacted under various pH and temperature conditions and the enzyme activity was compared.
- the enzyme reaction temperature was ranged from 60 ° C. to 90 ° C. in a range of 10 mM L-ribulose, 0.5 mM copper (or 1 mM cobalt; for geobacillus), 1.5 units (or 2). unit: in case of Geobacillus) / ml
- the reaction was carried out for 20 minutes using 50 mM Pipes (PIPES) buffer containing the enzyme, and the reaction was stopped by adding a final concentration of 200 mM hydrogen chloride.
- PPES Pipes
- the optimum temperature was found to be 70 ° C. for Geobacillus and 75 ° C. for Thermos, respectively (see FIGS. 4 and 14).
- the geobacillus thermodynic tripicans after 338 hours at 65 °C, 73 hours at 65 °C, 27 hours at 70 °C, 17 hours at 75 °C, 6.2 hours at 80 °C Geobacillus thermodenitrificans The enzyme activity was reduced by half.
- the filler's Thermo sseomeoseu (Thermus thermophilus) for the mannose-6-phosphate isomerase derived from a strain El was used as substrate - regardless of the re-fire agarose concentration of any image shows a conversion yield of about 70% 50, 100, 200 And 36, 71, 140, 211 g / l of el-ribose, respectively, at 300 g / l of el-ribulose.
- mannose 6-phosphate isomerase For the production of mannose 6-phosphate isomerase, the mannose 6-phosphate isomerase derived from Thermococcus sseomeoseu pillar's (Thermus thermophilus) strain it was first separated.
- Thermo filler's (Thermus thermophilus) DNA base sequence (Genebank Accession Number AP008226) of the known mannose 6-phosphate isomerase, evaluate whether KCCM 40879 strain, and derived therefrom with a gene sequence and amino acid sequence has already been specified Based on the primer (primer) was devised.
- the primers were designed with Nde I and EcoR I restriction enzyme cleavage sites, respectively. PCR was performed using the primers to amplify the nucleotide sequence of the gene. A large amount of mannose 6-phosphate isomerase gene was inserted into plasmid vector pET 28 (+) (Novagen) using restriction enzymes Nde I and EcoR I to prepare pET 28 (+) a / mannose 6-phosphate isomerase. It was.
- Primers were designed to construct mutant vectors of mannose 6-phosphate isomerase (see Table 1). Mutation was induced using the primers and the Quick-Change kit (Stratagene, Beverly, MA) to construct a pET 28 (+) a / mannose 6-phosphate isomerase mutant vector.
- the recombinant expression vector thus obtained was transformed into E. coli ER 2566 strain by a conventional transformation method.
- the transformed microorganism was stored frozen before the culture for the production of ribose by adding a 20% glycerin (glycerine) solution.
- Table 1 shows primers for constructing mutant vectors of mannose 6-phosphate isomerase.
- Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) PCR mutagenesis kit ( ClonTech Laboratories, Palo Alto. CA, USA) is random in a mannose-6-phosphate isomerase derived from a strain to mutagenic (Random mutagenesis) PTrc99a / mannose-6-phosphate isomerase mutant vector was prepared.
- the recombinant expression vector thus obtained was transformed into E. coli ER 2566 strain by a conventional transformation method.
- the transformed microorganism was stored frozen before the culture for the production of ribose by adding a 20% glycerin (glycerine) solution.
- the recombinant E. coli ER 2566 strain prepared in Example 6 was inoculated into a test tube containing 3 ml of LB medium and inoculated at 600 nm.
- the spawn cultivation was performed by shaking incubator at 37 degreeC until absorbance became 2.0.
- the seed cultured culture was then added to a 2,000 ml flask containing 500 ml of LB medium to carry out the main culture.
- 0.1 mM IPTG was added to induce mass expression of mannose 6-phosphate isomerase.
- the stirring rate during the process was adjusted to 200rpm, the culture temperature was maintained at 37 °C, and after the addition of IPTG, the stirring rate was adjusted to 150rpm, the culture temperature was adjusted to 16 °C.
- mannose 6-phosphate isomerase and the mutant enzyme produced as overexpressed as described above were centrifuged at 6,000 ⁇ g for 30 minutes at 6,000 ⁇ g and twice with 0.85% sodium chloride (NaCl). After washing, the cell solution was crushed by adding 50 mM sodium phosphate, 300 mM sodium chloride, 10 mM imidazole, 0.1 mM protease inhibitor (phenylmethylsulfonyl fluoride).
- the cell lysate was again centrifuged at 13,000 ⁇ g for 20 minutes at 4 ° C., the cell pellet was removed, and only the cell supernatant was obtained, followed by a fast protein liquid chromatography system (Bio-Rad Laboratories, Hercules, CA, USA). ) was equipped with a HisTrap HP adsorption column using a heat-tag and separated as an enzyme solution used for ribose production.
- Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) In order to mass-produce a mannose-6-phosphate isomerase mutant derived from the strain, produced in Example 5, and stored frozen The recombinant E. coli strain ER 2566 to LB The seed was inoculated into a test tube containing 3 ml of medium, and the seed culture was performed with a shake incubator at 37 ° C. until absorbance was 2.0 at 600 nm. The seed cultured culture was then added to a 2,000 ml flask containing 500 ml of LB medium to carry out the main culture.
- the mannose-6-phosphate isomerase mutant produced by overexpression as described above was centrifuged at 6,000 ⁇ g for 30 minutes at 6,000 ⁇ g, and twice with 0.85% sodium chloride (NaCl). After washing, the cell solution was crushed with a sonicator by adding 50 mM PIPES (pH 7.0) buffer solution and 0.1 mM protease inhibitor (phenylmethylsulfonyl fluoride). The cell lysate was heat-treated at 70 ° C. for 10 minutes and then again centrifuged at 13,000 ⁇ g at 4 ° C. for 20 minutes, cell pellets were removed, and only cell supernatant was obtained to obtain a fast protein liquid chromatography system. Rad Laboratories, Hercules, Calif., USA) was equipped with an anion resin Hi Trap TM HP adsorption column and separated as an enzyme solution used for the production of L-ribose.
- PIPES pH 7.0
- protease inhibitor phenylmethyl
- the enzymatic reaction was performed at 75 ° C. for 5 minutes using 50 mM PIPES buffer solution (pH 7.0) containing 10 mM ribulose, 0.5 mM Cu 2+ metal ions, followed by addition of 200 mM hydrogen chloride. The reaction was stopped.
- the enzyme activity was measured using ribose as a substrate, and the enzyme activity (unit) of the enzyme activity was defined as the amount to produce 1 nmole of ribose per minute at pH 7.0 and 75 °C to facilitate the comparative analysis.
- Table 2 shows the specific activity and kinetic parameters of mannose 6-phosphate isomerase and its mutant enzymes for el-ribulose.
- Bacillus Thermo di NITRY pecan switch (Geobacillus thermodenitrificans) derived from a strain mannose-6-phosphate isomerase and El of the mutant-enzyme activity for the re-fire agarose was carried out the measurement and the comparison experiments.
- the enzymatic reaction was performed for 5 minutes at 70 ° C. using 50 mM PIPES buffer solution (pH 7.0) containing 10 mM ribulose, 1 mM Co 2+ metal ions, followed by addition of 200 mM hydrogen chloride. The reaction was stopped.
- the enzyme activity was measured using L-ribulose as a substrate, and the enzyme activity of 1 unit (unit) of the enzyme activity was defined as the amount to produce 1 nmole of ribose per minute at pH 7.0 and 70 °C, comparative analysis It was smooth.
- Table 3 shows the enzymatic activity of mannose-6-phosphate isomerase and mutant enzymes against el-ribulose.
- the two most active residues were screened by screening mannose 6-phosphate isomerase derived from the strain of Geobacillus thermodenitrificans. The residues with the highest activity were selected by substitution with different amino acids.
- N90 residue and the L129 residue are converted into amino acids having different properties, and then point mutations are performed with the following N90A, N90D, N90E, N90H, N90K, N90L, N90Y, L129A, L129F, L129H, L129W, and L129Y.
- the activity test was compared with mannose-6-phosphate isomerase derived from wild type Geobacillus thermodinitripicans strain.
- the screening test of this experiment was performed by ketose assay using error prone PCR using Clontech Diversify PCR Random Mutagenesis Kit.
- the resulting mutants were converted to one residue each using a QuikChange Site-Directed Mutagenesis Kit from Stratagene, replaced with another amino acid, or subjected to two mutations.
- the activity was compared to the reaction with the existing MPi.
- the reaction was performed with 10 mmol / L L-ribulose with 0.5 mg / ml of enzyme containing co-factor 1 mM Co 2+ in 50 mmole / L PIPES buffer.
- the specific activity was measured by comparing the reaction at 70 minutes for 10 minutes (see FIGS. 23 and 24).
- doble mutations of N90A and L129F together confirmed higher activity (see FIG. 25).
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Abstract
Description
Enzyme | Mutation point | Relative activity (%) |
Wild | None | 100 |
Mutant 1 | K21E, N74T, M134R | 121 |
Mutant 2 | E67G, T238I | 132 |
Mutant 3 | K124R, L129F | 131 |
Mutant 4 | N90D | 125 |
Enzyme | Mutation point | Relative activity (%) | |
| None | 100 | |
| K21E, N74T, M134R | 121 | |
| E67G, T238I | 132 | |
Mutant 3 | K124R, L129F | 131 | |
| N90D | 125 |
Claims (15)
- 엘-리보스(L-ribose)의 생산에 사용되는 만노스-6-인산 이성화효소(mannose-6-phosphate isomerase).Mannose-6-phosphate isomerase used for the production of L-ribose.
- 제 1항에 있어서,상기 만노스-6-인산 이성화효소는 써머스 써모필러스(Thermus thermophilus) 또는 지오바실러스 써모디니트리피칸스(Geobacillus thermodenitrificans)균주로부터 유래한 것을 특징으로 하는 만노스-6-인산 이성화효소.The method of claim 1, wherein the mannose-6-phosphate isomerase is sseomeoseu Thermo filler's (Thermus thermophilus) or geo Bacillus Thermo di NITRY pecan's mannose-6-phosphate isomerase, characterized in that derived from the strain (Geobacillus thermodenitrificans) enzyme.
- 제 1항에 있어서, 상기 이성화 효소는 서열번호 1 또는 2의 아미노산 서열을 가지는 것을 특징으로 하는 만노스-6-인산 이성화효소. The mannose-6-phosphate isomerase of claim 1, wherein the isomerase has an amino acid sequence represented by SEQ ID NO: 1 or 2.
- 제 1항 내지 제3 항 중 어느 한 항의 효소를 코딩하는 유전자.A gene encoding the enzyme of any one of claims 1 to 3.
- 제 4항에 있어서, 상기 유전자는 서열번호 3 또는 4의 염기서열을 가지는 유전자.The gene of claim 4, wherein the gene has a nucleotide sequence of SEQ ID NO: 3 or 4. 6.
- 서열번호 서열번호 3 내지 서열번호 12 중 어느 하나의 염기서열을 가지는 만노스-6-인산 이성화효소 유전자를 포함하는 재조합 발현 벡터. Recombinant expression vector comprising a mannose-6-phosphate isomerase gene having the nucleotide sequence of any one of SEQ ID NO: 3 to SEQ ID NO: 12.
- 제 6항에 있어서,The method of claim 6,상기 재조합 발현벡터는 발현벡터 pET 28(+)a/mannose-6-phosphate isomerase 또는 pTrc 99a/만노스-6-인산 이성화 효소인 재조합 발현벡터.The recombinant expression vector is a recombinant expression vector pET 28 (+) a / mannose-6-phosphate isomerase or pTrc 99a / mannose-6- phosphate isomerase.
- a)제 6항 또는 제 7항의 발현벡터로 형질전환된 미생물을 배양하고;a) culturing the microorganism transformed with the expression vector of claim 6;b) 상기 미생물로부터 만노스 6-인산 이성화효소를 분리하는 단계를 포함하는 제 1항 내지 제3항 중 어느 한 항의 만노스 6-인산 이성화효소를 제조하는 방법.b) A method for preparing mannose 6-phosphate isomerase according to any one of claims 1 to 3, comprising the step of separating mannose 6-phosphate isomerase from the microorganism.
- 제 1항 내지 제3항 중 어느 한 항의 만노스-6-인산 이성화효소를 이용하여 엘-리보스를 생산하는 방법.A method for producing L-ribose using the mannose-6-phosphate isomerase of any one of claims 1 to 3.
- a)서열번호 1의 만노스 6-인산 이성화효소의 142번 잔기의 아미노산을 아르지닌(Arg)에서 아스파라긴(Asn)으로 변환시킨 돌연변이체;a) a mutant obtained by converting an amino acid of residue 142 of mannose 6-phosphate isomerase of SEQ ID NO: 1 from arginine (Arg) to asparagine (Asn);b) 서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 21번, 74번, 134번 잔기의 아미노산을 각각 라이신(K), 아스파라진(N), 메티오닌(M)에서 각각 글루탐산(E), 트레오닌(T), 아르지닌(R)으로 변환시킨 돌연변이체;b) the amino acids of residues 21, 74 and 134 of mannose 6-phosphate isomerase of SEQ ID NO: 2 in lysine (K), asparagine (N) and methionine (M), respectively Mutants converted to glutamic acid (E), threonine (T), and arginine (R), respectively;c) 서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 67번, 238번 잔기의 아미노산을 각각 글루탐산(E), 트레오닌(T)에서 각각 글라이신(G), 아이소루신(I)으로 변환시킨 돌연변이체;c) The amino acids of residues 67 and 238 of mannose 6-phosphate isomerase as set forth in SEQ ID NO: 2 were respectively converted into glycine (G) and isoleucine in glutamic acid (E) and threonine (T), respectively. Mutants converted to I);d)서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 124번 잔기의 아미노산을 라이신(K)에서 아르지닌(R)으로 변환시킨 돌연변이체;d) a mutant obtained by converting the amino acid of residue 124 of mannose 6-phosphate isomerase described in SEQ ID NO: 2 from lysine (K) to arginine (R);e) 서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 129번 잔기의 아미노산을 루신(L)에서 페닐알라닌(F) 또는 타이로신(Y)으로 변환시킨 돌연변이체; e) a mutant in which amino acid at residue 129 of mannose 6-phosphate isomerase described in SEQ ID NO: 2 is converted from leucine (L) to phenylalanine (F) or tyrosine (Y);f) 서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 90번 잔기의 아미노산을 아스파라진(N)에서 알라닌(A),아스파트산(D),히스티딘(H) 또는 류신(L)으로 변환시킨 돌연변이체로 구성된 군으로부터 선택된 만노스 6-인산 이성화효소 돌연변이체;및f) The amino acid of residue 90 of mannose 6-phosphate isomerase as set forth in SEQ ID NO: 2 is substituted with alanine (A), aspartic acid (D), histidine (H) in asparagine (N) or Mannose 6-phosphate isomerase mutants selected from the group consisting of mutants converted to leucine (L); andg) 상기 b) 내지 f) 중 어느 하나 이상의 단일 포인트 돌연변이의 조합으로 둘 이상의 해당 잔기에서 원래 아미노산이 b) 내지 f) 중 어느 하나 이상의 해당 돌연변이 아미노산으로 변환시킨 둘 이상의 해당 잔기에서 돌연변이가 수행된 돌연변이체g) a combination of single point mutations of any one or more of b) to f) wherein mutations have been carried out at two or more corresponding residues wherein the original amino acid has been converted from the two or more corresponding residues to the corresponding mutant amino acids of any one or more of b) to f) Mutant로 구성된 군으로부터 선택된 하나 이상의 만노스 6-인산 이성화효소 돌연변이체 효소.At least one mannose 6-phosphate isomerase mutant enzyme selected from the group consisting of:
- 제 10항의 만노스 6-인산 이성화효소 돌연변이체를 코딩하는 유전자.A gene encoding the mannose 6-phosphate isomerase mutant of claim 10.
- 제 11항에 있어서, 상기 유전자는 서열번호 2 내지 서열번호 12에 기재된 염기서열을 가지는 유전자.The gene of claim 11, wherein the gene has a nucleotide sequence set forth in SEQ ID NO: 2 to SEQ ID NO: 12.
- 제 10항에 있어서, 상기 g)의 돌연변이체는 서열번호 2에 기재된 만노스 6-인산 이성화효소 (mannose 6-phosphate isomerase)의 90번 잔기의 아미노산을 아스파라진(N)에서 알라닌(A)으로 변환시키고, 129번 잔기의 아미노산을 류신(L)에서 페닐알라닌(F)으로 변환시킨 만노스 6-인산 이성화효소 돌연변이체 효소.The mutant of g) converts the amino acid of residue 90 of mannose 6-phosphate isomerase as set forth in SEQ ID NO: 2 from asparagine (N) to alanine (A). And mannose 6-phosphate isomerase mutant enzyme wherein amino acid of residue 129 is converted from leucine (L) to phenylalanine (F).
- 제 10항의 만노스 6-인산 이성화효소 돌연변이체를 포함하는 리보스 생산용 조성물.A composition for producing ribose comprising the mannose 6-phosphate isomerase mutant of claim 10.
- 제 10항의 만노스-6-인산 이성화효소 돌연변이체를 이용하여 엘-리보스를 생산하는 방법.A method for producing el-ribose using the mannose-6-phosphate isomerase mutant of claim 10.
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