WO2011000855A1 - 2-carboxamide cycloamino ureas useful as pi3k inhibitors - Google Patents
2-carboxamide cycloamino ureas useful as pi3k inhibitors Download PDFInfo
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- WO2011000855A1 WO2011000855A1 PCT/EP2010/059254 EP2010059254W WO2011000855A1 WO 2011000855 A1 WO2011000855 A1 WO 2011000855A1 EP 2010059254 W EP2010059254 W EP 2010059254W WO 2011000855 A1 WO2011000855 A1 WO 2011000855A1
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- 0 *[C@]1C2NC2CCCCCCCC(N=C(*)*2)=C2**1 Chemical compound *[C@]1C2NC2CCCCCCCC(N=C(*)*2)=C2**1 0.000 description 5
- QEFGYBFOJJBGNO-UHFFFAOYSA-N CC(C)(C)C(NC1)=CC=C1OCOC Chemical compound CC(C)(C)C(NC1)=CC=C1OCOC QEFGYBFOJJBGNO-UHFFFAOYSA-N 0.000 description 1
- QVAYQQRQBHBRTA-GDVGLLTNSA-N Nc1nc(CCCC2O[C@@H]22)c2[s]1 Chemical compound Nc1nc(CCCC2O[C@@H]22)c2[s]1 QVAYQQRQBHBRTA-GDVGLLTNSA-N 0.000 description 1
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- C07D513/14—Ortho-condensed systems
Definitions
- the present invention relates to substituted 2-carboxamide cycloamino ureas, as new phosphatidylinosilol (Pl) 3-kinase inhibitor compounds, their pharmaceutically acceptable salts, prodrugs thereof and processes for their production.
- This invention also relates to compositions of these compounds, either alone or in combination with at least one additional therapeutic agent, and optionally in combination with a pharmaceutically acceptable carrier.
- This invention still further relates to methods of use of these compounds, either alone or in combination with at least one additional therapeutic agent, in the prophylaxis or treatment of a number of diseases, in particular, those mediated by one or more of abnormal activity of growth factors, receptor tyrosine kinases, protein serlne/heroine kinases, G protein coupled receptors and phospholipid kinases and phosphatases.
- Phosphatidylinositol 3-kinases comprise a family of lipid kinases that catalyze the transfer of phosphate to the D-3 * position of inositol lipids to produce phosphoinositoi-3- phosphate (PIP), phosphoinosito(-3,4-diphosphate (PIP 2 ) and phosphoinositol-3.4.5- triphosphate (PlP 3 ) that, in turn, act as second messengers in signaling cascades by docking proteins containing pleckstrin-homology, FYVE, Phox and other phosph ⁇ lipid-bindmg domains into a variety of signaling complexes often at the plasma membrane
- Class 1A PI3Ks are heterodimers composed of a catalytic p110 subunit ( ⁇ , p, ⁇ isoforms) constitutive ⁇ associated with a regulatory subunit that can be p ⁇ , p55 ⁇ , p50u s p85 ⁇ or ⁇ 55 ⁇ .
- the Class 1B sub-class has one family member, a heterodimer composed of a catalytic p11Oy subunit associated with one of two regulatory subunits, p101 or p84 (Fruman et al., Ann ⁇ Rev. Biochem. 67:481 (1998); S ⁇ ire et ai., Curr. Biol. 15:566 (2005)).
- the modular domains of the p85/55/50 subunits include Src Homology (SH2) domains that bind phosphotyrosine residues in a specific sequence context on activated receptor and cytoplasmic tyrosine kinases, resulting in activation and localization of Class 1A PI3Ks.
- SH2 Src Homology
- Class 1B PI3K is activated directly by G protein-coupled receptors that bind a diverse repertoire of peptide and non-peptide ligands ⁇ Stephens et al.. Ce// 89:105 (1997)); Katso et al., Annu. Rev. Cell Dev. Biol. 17:615-675 (2001)).
- Akt the product of the human homoiogue of the viral oncogene v-Akt, to the plasma membrane where it acts as a nodal point for many
- inhibitors of PI3Ks would be of particular value in the treatment of proliferative disease and other disorders.
- Selectivity towards the PI3K u isoform is desirable, and further desirable properties include improved pharmacokinetic properties and/or chemical stabiiity.
- WO2004/096797 discloses certain thiazole derivatives as inhibitors of P13 kinase and their use as pharmaceutical.
- WO 2005/021519 also discloses certain thiazole derivatives as inhibitors of PI3 kinase and their use as pharmaceutical. It has now been found that the 2-carboxamide cycioamino ureas of the formula I given below have advantageous pharmacological properties and inhibit, for example, the PI3 kinases (phosphatidylinositol 3-kinase). In particular, preferably, these compounds show selectivity for PI3K alpha versus beta and/or deita and/or gamma subtypes in the biochemical and/or in the DCiular assay. A further property which is preferably desirable for compounds of formula I includes improved stability, for example, improved chemical stability e.g.
- the compounds of formula I are suitable, for example, to be used in the treatment of diseases depending on the PI3 kinase (in particular PI3K afpha, such as those showing somatic mutation of PIK3CA or germNne mutations or somatic mutation of PTEN), especiaiiy proliferative diseases such as tumor diseases and
- the present invention provides compounds of formula I,
- X-Y is ⁇ CHj) r or 0(CHj) 1 or (CH 2 ),O wherein,
- r is 1, 2 or 3;
- t 1 or 2;
- n 0, 1 or 2;
- q O 1 1, 2, 3 or 4;
- R' represents, independently at each occurrence
- Ci-C 7 -alkyi which is substituted one or more times by
- heterocyclyl and wherein aryl may be mono or poly-substituted by halo; or two R 1 substituents together form an alkandtyf to form a cyclic moiety, optionaliy substituted by hydroxy or halo; or a salt, solvate, hydrate or prodrug thereof.
- any formula given herein is intended to represent compounds having structures depicted by the structural formula as welf as certain variations or forms, in particular, compounds of any formula given herein may have asymmetric centers and therefore exist in different stereoisomer ⁇ forms such as different enantiomeric forms.
- at least one asymmetrical carbon atom is present in a compound of the formula I, such a compound may exist in optically active form or in the form of a mixture of optical isomers, e. g. in the form of a racemic mixture.
- an asymmetric carbon atom may be present in the (R)-, (S)- or (Reconfiguration, preferably in the (Ry or (S)-configuration.
- any given formula given herein is intended to represent a racemate, one or more enantiomeric forms, one or more diastereomeric forms, one or more atropisomeric forms, and mixtures thereof.
- certain structures may exist as geometric isomers (e.g. cis and trans isomers), as tautomers, or as atropisomers.
- the compounds of the invention may thus be present as mixtures of isomers or preferably as pure isomers, preferably as enantiomer-pure diastereomers or pure enantiomers. Any formula given herein is intended to represent hydrates, solvates, and polymorphs of such compounds, and mixtures thereof.
- isotopicaiiy labeled forms of the compounds lsotopically labeled compounds have structures depicted by the formulas given herein except that one or more atoms are replaced by an atom having a selected atomic mass or mass number.
- isotopes that can be incorporated into compounds of the invention include isotopes of hydrogen, carbon, nitrogen, oxygen, phosphorous, fluorine, and chlorine, such as 2 H, 3 H, ' 1 C, 13 C 1 1 ⁇ C, 1S N, 31 P 1 32 P 1 18 F 35 S, 36 Ci, 125 I respectively.
- isotopicaiiy labeled compounds of the present invention for example those into which radioactive isotopes such as 3 H 1 13 C, and H C are incorporated.
- Such isotopicaiiy labelled compounds are useful in metabolic studies (preferably with 14 C).
- reaction kinetic studies ⁇ with, for example 2 H or 3 H), detection or imaging techntques, such as positron emission tomography (PET) or single-photon emission computed tomography (SPECT) including drug or substrate tissue distribution assays, or in radioactive treatment of patients.
- PET positron emission tomography
- SPECT single-photon emission computed tomography
- an 18 F or labeled compound may be particularly preferred for PET or SPECT studies.
- substitution with heavier isotopes such as deuterium (i.e., 2 H) may afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life or reduced dosage requirements.
- Isotopicaiiy labeled compounds of this invention and prodrugs thereof can generally be prepared by carrying out the procedures disclosed in the schemes or in the examples and preparations described below by substituting a readily available isotopicaiiy labeled reagent for a non-isotopicaiiy labeled reagent.
- substitution with heavier isotopes, particularly deuterium (i.e., 2 H or D) may afford certain therapeutic advantages resulting from greater metabolic stability, for example increased in vivo half-life or reduced dosage requirements or an improvement in therapeutic index.
- isotopic enrichment factor means the ratio between the isotopic abundance and the natural abundance of a specified isotope.
- a substituent in a compound of this invention is denoted deuterium, such compound has an isotopic enrichment factor for each designated deuterium atom of at least 3500 (52.5% deuterium incorporation at each designated deuterium atom), at least 4000 ⁇ 60% deuterium incorporation) , at least 4500 (67.5% deuterium incorporation), at least 5000 ⁇ 75% deuterium incorporation) : at least 5500 (82.5% deuterium incorporation), at least 6000 ⁇ 90% deuterium incorporation), at feast 6333.3 ⁇ 95% deuterium incorporation), at least 6466.7 (97% deuterium incorporation), at least 6600 (99% deuterium incorporation), or at ieast 6633.3 (99.5% deuterium incorporation).
- any atom not specificaiiy designated as a particular isotops is meant to represent any stable isotope of that atom.
- a position is designated specifically as “H” or “hydrogen”, the position is understood to have hydrogen at its natural abundance isotopic composition.
- any atom specifically designated as a deuterium (O) is meant to represent deuterium, for example in the ranges given above.
- the selection of a particular moiety from a iist of possible species for a specified variable is not intended to define the moiety for the variable appearing elsewhere.
- the choice of the species from a specified fist is independent of the choice of the species for the same variable elsewhere in the formula (where one or more up to all more general expressions in embodiments characterized as preferred above or below can be replaced with a more specific definition, thus leading to a more preferred embodiment of the invention,
- Salts are preferably the pharmaceutically acceptable salts of compounds of formula ⁇ ! if they are carrying salt-forming groups. Acids/bases required to form the salts are generally known in the field.
- Halogen denotes fluorine, bromine, chlorine or iodine, in particular fluorine, chlorine.
- Halogen-substituted groups and moieties such as alkyl substituted by halogen ⁇ halogenalkyl) can be mono-, poly- or per-haiogenated.
- Hetero atoms are atoms other than Carbon and Hydrogen, preferably nitrogen (N), oxygen (O) or sulfur (S), in particular nitrogen.
- Alkyl refers to a straight-chain or branched-chain alkyl group, and includes C h alky! and more preferably C ⁇ alkyl.
- alkyl groups include, for example, methyl, ethyl, n- or iso- propyl, n-, iso-, sec- or tert-butyl, n-pentyl, n-hexyl, n-heptyl, with particular preference given to methyi, ethyl, n-propyl, iso-propyl, n-butyl and iso-butyl.
- Atkyl may be unsubstituted or substituted.
- substituents include, but are not limited to hydroxy, alkoxy, halogen (especially fiuoro), amino and di-substituted amino, mono- or di-aikyl substituted amino, acetylamino, morpho ⁇ nyl, aryl.
- An example of a substituted alkyl is trifluoromethyl.
- Cycioalkyl may also be a substit ⁇ ent to alkyi.
- An example of such 3 case is the moiety
- alkyO-cycloalkyl such as (afkyl)-cyclopropyl or (aikyl)-cyciobutyi, e.g. methyl-cyclopropyl or methyi-cyclobutyi.
- a more specific example of an (alkyl)-cycioalkyl moiety includes geminai- type of substitution pattern, e.g. 1-aikyl cycioalkyl, such as 1 -methyl cydopropyl.
- cycloatkyl as a substit ⁇ ent to alkyl is aikandiyl-cycloafkyl, such as alkandiyl- cyclopropyl, e.g. -CHu-cyclopropyl.
- C r C 7 -aikyi is alky! with from and including 1 up to and including 7 carbon atoms, preferably from and including 1 up to and including 4 carbon atoms (CrC ⁇ -alkyl), and is linear or branched: preferably, lower alkyl is butyl, such as n- butyl, sec-butyl, isobutyl. tert-buiyl, propyl, such as n-propyl or isopropyl, ethyl or preferably methyl.
- C 3 . 7 -Cycloalkyr refers to a saturated or partially saturated, monocyclic, fused poiycycllc, or Spiro poiycycffc. carbocycie having from 3 to 7 ring atoms per carbocycle.
- cycioalkyl groups include the following moieties: cyclopropyl, cyclobutyl, cycipentyl and cylclohexyl.
- C 3 -C 7 -cycloa!kyl may be unsubstituted or substituted; exemplary substrtuents are provided in the definition for alkyl.
- C 3 -C 6 -cyc!oalkyl may also be a substit ⁇ ent on other groups, e.g. on an aikyl group.
- Aryl refers to an unsaturated carbocycfic aromatic ring system, preferably, having a ring system of not more than 16 carbon atoms, especially not more than 10 carbon atoms, e.g. having 6 to 16, preferably ⁇ to 10 ring carbon atoms, is preferably mono- or bi-cyciic, and is unsubstituted or substituted.
- aryl is unsubstituted or substituted phenyi.
- Heterocyclyl refers to a heterocyclic radical that is unsaturated ⁇ in particular maximaiiy unsaturated, eg. carrying the highest possible number of conjugated double bonds in the ri ⁇ g(s)) e.g.
- heteroaryl saturated or partially saturated in the bonding ring and is preferably a monocyclic or in a broader aspect of the invention bicyclic ring; has 3-16 ring atoms, more preferably 4-10 ring atoms, wheretn at least in the ring bonding to the radical of the molecule of formula (I) one or more, preferably 1-4 ring atoms, especially one or two ring atoms are a heteroatom selected from the group consisting of nitrogen, oxygen and sulfur; the bonding ring preferably having 4-12 ring atoms, especiaily 4-7 ring atoms, for example 6-10 ring atoms, especially for heteroaryl, such as 5, 6, 9 or 10 ring atoms.
- the heterocyciyl may be unsubstituted or substituted by one or more, especially 1 to 3.
- Treatment includes prophylactic (preventive) and therapeutic treatment as well as the delay of progression of a disease or disorder.
- PI3 kinase mediated diseases are especially such disorders that respond in a beneficial way (e.g. amelioration of one or more symptoms, delay of the onset of a disease, up to temporary or complete cure from a disease) to the inhibition of a PI3 kinase, especially inhibition of PiSKalpha (where the diseases to be treated may include those showing somatic mutation of PIK3CA or germline mutations or somatic mutation of PTEN).
- Diseases to be treated include especially proliferative diseases such as tumor diseases, including solid tumors, leukaemias, glioblastoma, breast cancer and prostate cancer may be mentioned).
- Salts ⁇ which, what is meant by “or salts thereof” or “or a salt thereof), can be present alone or in mixture with free compound of the formula I and are preferably pharmaceutically acceptable salts.
- Salt-forming groups in a compound of formula (I) are groups or radicals having basic or acidic properties.
- Compounds having at least one basic group or at least one basic radical, e.g., amino; a secondary amino group not forming a peptide bond or a pyridyl radical may form acid addition salts, e.g., with inorganic acids, such as hydrochloric acid, sulfuric acid or a phosphoric acid; or with suitable organic carboxyiic or sulfonic acids, e.g., aliphatic mono- or di-carboxylic acids, such as trifluoroacetic acid, acetic acid, propionic acid, glycolic acid, succinic acid, maieic acid, fumaric acid, hydroxymaleic acid, malic acid, tartaric acid, citric acid or oxalic acid; or amino acids, such as argtnine or lysine; aromatic carboxyiic acids, such as benzoic acid; 2-phenoxy-benzoic acid; 2-acetoxy-benzoic acid; salicylic acid: 4-aminosalicyiic acid: aromatic-
- Compounds of formula (I) having acidic groups, a carboxy group or a phenolic hydroxy group may form metal or ammonium saits.
- metal or ammonium saits such as alkali metal or alkaline earth metal salts, e.g., sodium, potassium, magnesium or calcium salts; or ammonium saits with ammonia or suitable organic amines, such as tertiary monoamines, e.g., triethylamine or
- t ⁇ 2-hydraxyethyi)-amine or heterocyclic bases, e.g., ⁇ /-ethyl-pipe ⁇ dine or
- any reference to the free compounds hereinbefore and hereinafter is to be understood as referring also to the corresponding salts, as appropriate and expedient.
- the present invention also relates to pro-drugs of a compound of formula (I) that convert in vivo to the compound of formula (I) as such.
- Any reference to a compound of formula (f) is therefore to be understood as referring afso to the corresponding pro-drugs of the compound of formula (I), as appropriate and expedient.
- Combination refers to either a fixed combination in one dosage unit form, or a kit of parts for the combined administration where a compound of the formula I and a combination partner (e.g. an other drug as explained beiow, also referred to as “therapeutic agent” or “co- agent”) may be administered independently at the same time or separately within time intervals, especially where these time intervals allow that the combination partners show a cooperative, e.g. synergistic effect.
- a combination partner e.g. an other drug as explained beiow, also referred to as “therapeutic agent” or “co- agent”
- co- agent e.g. an other drug as explained beiow, also referred to as "therapeutic agent” or “co- agent”
- pharmaceutical combination means a product that results from the mixing or combining of more than one active ingredient and includes both fixed and non-fixed combinations of the active ingredients.
- fixed combination means that the active ingredients, e.g. a compound of formula I and a combination partner, are both administered to a patient simultaneously in the form of a single entity or dosage.
- non-fixed combination means that the active ingredients, e.g. a compound of formula I and a combination partner, are both administered to a patient as separate entities either simultaneously, concurrently or sequentially with no specific time limits, wherein such administration provides therapeutically effective levels of the two compounds in the body of the patient.
- cocktail therapy e.g. the administration of three or more active ingredients.
- the invention relates to a compound of the formula I, in free base form or in salt form, wherein the substituents are as defined herein.
- the alpha-amide substituent is at the 2-position on the pyrrolidine ring and the stereochemistry at this position is as drawn.
- the ring A is preferably an unsubstituted or substituted 5- or 6-membered heterocyclic
- heteroaryl ⁇ preferably a heteroaryl ring containing 1 or 2 heteroatoms selected from N, S or O, wherein at least one heteroatom is N.
- ring A is selected from an unsubstituted or substituted pyridine ring, unsubstituted or substituted pyhmidine ring, unsubstituted or substituted thiazole ring, unsubstituted or substituted pyrazole ring or unsubstituted or substituted oxazole nng. More preferred is an unsubstituted or substituted pyridine ring, unsubstituted or substituted pyrimidine ring or unsubstituted or substituted thiazoie ring, Preferably, ring A is fused to the rest of the molecule of formula I through carbon atoms of ring A.
- Ring A is preferably substituted by one, two or three R 2 groups, preferably two R 2 groups, most preferably one R 2 group, independently selected at each occurrence from,
- R 2 is selected from
- R 2 is selected from methyl, t-butyl, diethylamino, cyclopropylmethyf, 2- fluoro-1 ,1-dimethylethyl or 2,2,2-trifiuor ⁇ -1 ,1 -dimethyl-ethyl.
- R 2 is selected from methyl, t-butyl, diethylamino, cyclopropylmethyl or 2-f!uoro-1 ,1-dimethylethyi.
- the ring A is more preferably selected from A1 or A2 or A3 or A4 or A5 or A6:
- Z is N or CH and R 2 is defined as above.
- ring A is selected from A1 or A2.
- X-Y preferably represents (CHj-Jr or O ⁇ CH 2 ) t wherein,
- r is 1, 2 or 3;
- t 1 or 2;
- X-Y more preferably represents (CH s ) r or 0(CHs) 1 wherein r is 2 and t is 1.
- X-Y is preferably -CH 2 -CH 2 - or -0-CH 2 -, such that in the latter case, the X in X-Y is the O in -0-CH 2 -.
- R 1 preferably represents, independently at each occurrence. hafo;
- R 1 more preferably represents, independently at each occurrence
- methyl which is substituted one or more times (preferably substituted once) by hydroxy, meihoxy, dimethyiamino, di-(perdeuteromethy!)amino, phenyl, morphoiinyl, acetylamino, or ⁇ /-(methyl)- ⁇ /-(phenylmethyl)am»no, and wherein independently each phenyl may be mono or poiy-substituted by fluoro.
- R 1 most preferably represents, independently at each occurrence
- An embodiment of the present invention includes compounds of the formula I wherein n is 0 or 1. Preferabiy, n is 1.
- Another embodiment of the present invention includes compounds of the formuia I wherein q is 0, that is, wherein the nitrogen containing heterocyclic ring is substituted only by the amide at position 2. In this embodiment, it is preferred that n is 0 or 1, more preferably 1.
- Another embodiment of the present invention includes compounds of the formuia I wherein q is 1 , that is, wherein the nitrogen containing heterocyclic ring is substituted only by the amide at position 2 and a single R 1 group, in this embodiment it is preferred that n is 0 or 1 , more preferably 1.
- the R 1 group may be substituted at position 2- ⁇ i.e. on the same carbon as that which is substituted by the amide group) or position 3- or position 4- or position 5- of the nitrogen containing heterocyclic ring.
- the R 1 group is substituted at position 3 of the nitrogen containing heterocyclic ring, i.e. compounds of formula IA:
- substitutents are defined as for a compound of formula (i).
- n is 1 , thus providing compounds wherein the nitrogen containing heterocyclic ring is a pyrrolidine ring, substituted at the 2-position by an amide having the drawn stereochermstry. and in the 3-position by an R 1 group.
- the R 1 group has a stereochemistry which is cis- to the amide at position 2, i.e. compounds according to formula (iA ! ):
- n 1
- the nitrogen containing heterocyclic ring is a pyrrolidine ring, substituted at the 2-position by an amide having the drawn stereochemistry, and in the 3-position by an R 1 group having the drawn stereochemisty, thus the amide and R 1 groups are cts- relative to each other.
- a further embodiment of the present invention includes compounds of the formula I wherein q is 2 or 3, thus at least two R 1 substttuents are present, each R 1 independently selected from the groups defined as for formula I herein.
- each of two R 1 is bonded at position 3 of the pyrrolidine ring, and an optional third R 1 group, if present, is bonded elsewhere on the nitrogen containing heterocyclic ring. It is further preferred that n is 1 and the third R 1 group, if present, is bonded at the 4- or 5- position of the resultant pyrrolidine ring , i.e. to provide compounds of formula IB:
- a further embodiment of the present invention includes compounds of the formula I wherein n is 1 , and wherein two R 1 groups are bonded at position 3 of the pyrrolidine ring, and, together form an alkandiyl, preferably a C 3 -C 8 -cycloalkyl. in particular a cyclopropyi, i.e. to provide compounds of formula IC:
- substitutents are defined as for a compound of formula (!) and the third R 1 group is optional, and if present, is preferably bonded at position 4- of the pyrrolidine ring.
- the invention further relates to pharmaceutically acceptable prodrugs of a compound of formula (I), (IA), (IA"), (IB) and/or (IC).
- the invention further relates to pharmaceutically acceptable metabolites of a compound of formula (1), (IA), (IA : ). (IB) and/or (IC).
- the invention relates especially to the compounds of the formula (I), ((A), (IA'). (IB) and/or (IC) given in the Examples, as well as the methods of manufacture described herein.
- the present invention also relates to processes for the production of a compound of formula (I), (IA), (IA'), (IB) and/or (IC). In principle all known processes which convert two different amines into a corresponding urea derivative are suitable and may be applied by using the respective starting material.
- the invention in particular relates to a process which comprises reacting a compound of formula Il
- R " is as defined above;
- RG represents a reactive group (such as imidazolylcarbonyl) ("method B"), in each case optionally in the presence of a diiuent and optionally in the presence of a reaction aid and recovering the resulting compound of formula f in free form or in form of a salt and, optionally converting a compound of the formula I obtainable according to method A or method B into a different compound of the formula I, and/or converting an obtainable saft of a compound of the formula I into a different sail thereof, and/or converting an obtainable free compound of the formula I into a salt thereof, and/or separating an obtainable isomer of a compound of the formula f from one or more different obtainable isomers of the formufa i.
- a compound of formula Ii may be reacted with a compound of formula IHA or IHB in a solvent, e.g. dimethylformamide, in the presence of a base e.g. an organic amine, e.g. triethylamine.
- a solvent e.g. dimethylformamide
- a base e.g. an organic amine, e.g. triethylamine.
- Ail reactions may take place in the presence of one or more diluents and/or solvents.
- the starting materials may be used in equimolar amounts; alternatively, a compound may be used in excess, e.g. to function as a solvent or to shift equilibrium or to generally accelerate reaction rates.
- Reaction aids such as acids, bases or catalysts may be added in suitable amounts, as known in the field, required by a reaction and in line with generally known procedures.
- one or more other functional groups for example carboxy, hydroxy, amino, sulfhydryl or the like are or need to be protected in a starting material as described herein or any other precursor, because they should not take part in the reaction or disturb the reaction, these are such groups as are usually used in the synthesis of peptide compounds, and also of cephalosporins and penicillins, as well as nucleic actd derivatives and sugars.
- Protecting groups are such groups that are no longer present in the final compounds once they are removed, while groups that remain as substituents are not protecting groups in the sense used here which are groups that are added at a starting material or intermediate stage and removed to obtain a final compound.
- protecting groups may be introduced and removed, if useful or required.
- the protecting groups may already be present in precursors and should protect the functional groups concerned against unwanted secondary reactions, such as acyiations, etheri- fications, esterifications, oxidations, soivolysis, and similar reactions, it is a characteristic of protecting groups that they lend themselves readily, i.e. without und ⁇ sired secondary reac- tions, to removal, typically by acetoiysis.
- a compound of the formula (I), (IA), (IA ! ), (IB) and/or (IC) may be converted into a different compound of the formula (I). (IA), (IA 1 ), (IB) and/or (IC).
- a substituent carries an amino or amino-C,-C 7 -alkyl substituent
- the amino can be converted into acylamtno, e.g. Ci-C 7 -alKanoy!amino, by reaction with a corresponding d-Cr-alkanoylhalogenide, e g a corresponding chloride, in the presence of a tertiary nitrogen base, such as triethyiamine or pyridine, in the absence or presence of an appropriate solvent, such a methylene chloride, for example at temperatures in the range from -20 to 50 0 C, e.g.
- Saits of a compound of formula (I) 1 (IA), (IA'), (18) and/or (IC) with a salt-forming group may be prepared in a manner known per se Acid addition sails of compounds of formula (I), (IA), (IA'), (IB) and/or (IC) may thus be obtained by treatment with an acid or with a suitable anion exchange reagent.
- a salt with two acid molecules may also be converted into a salt with one acid molecule per compound (for example a monohalogenide); this may be done by heating to a melt, or for example by heating as a solid under a high vacuum at elevated temperature, for example from 130 to 170 0 C, one molecule of the acid being expelled per molecule of a compound of formula (I), (IA), (IA'), (IB) and/or (IC).
- Salts can usually be converted to free compounds, e.g. by treating with suitable basic compounds, for example with alkali metal carbonates, alkali meta! hydrogencarbonates, or alkali metal hydroxides, typically potassium carbonate or sodium hydroxide.
- Stereoisomeric mixtures e.g. mixtures of diastereomers
- Dia- stereomeric mixtures for example may be separated into their individual diastereomers by means of fractionated crystallization, chromatography, solvent distribution, and similar procedures. This separation may take piace either at the level of a starting compound or in a compound of formula (I) 1 (IA), (IA r ) r (IB) and/or (IC) itself.
- Enanti ⁇ mers may be separated through the formation of diastereomeric safts. for example by sail formation with an enantiomer-pure chiral acid, or by means of chromatography, for example by HPLC, using chromatographic substrates with chiral liga ⁇ ds.
- the starting materials of the formulae Il and Hi, as well as other starting materials me ⁇ - tioned herein, e.g. below, can be prepared according to or in analogy to methods that are known in the art, are known in the art and/or are commercially available. Insofar as the production of the starting materials is not particularly described, the compounds are either known or may be prepared analogously to methods known in the art, e.g in WO 05/021519 or WO04/096797, or as disclosed hereinafter. Novel starting materials, as well as processes for the preparation thereof, are likewise an embodiment of the present invention. In the preferred embodiments, such starting materials are used and the reaction chosen are selected so as to enable the preferred compounds to be obtained.
- substituents are preferably as defined for a compound of the formula (f), (IA), (IA'), (IB) and/or (iC).
- compositions Use and methods of treatment
- the present invention also relates to use of the compounds of formula (I) 1 (IA), (IA'),
- compositions comprising a compound of formuia (i), (IA) 1 (IA'), (IB) and/or (IC), e.g. for human or veterinary use, e.g. where inhibition of PI3K is indicated.
- the invention relates to the treatment of cellular proliferative diseases such as tumor (benign or malignant) and/or cancerous cell growth, e.g.
- PI3K mediated by PI3K.
- Diseases may include those showing somatic mutation of PIK3CA or germline mutations or somatic mutation of PTEN.
- the compounds may be useful in the treatment of human or animal (e.g.. murine) cancers, including, for example, sarcoma: lung; bronchus; prostate; breast (including sporadic breast cancers and sufferers of Cowden disease); pancreas; gastrointestinal cancer; colon; rectum; colon carcinoma; colorectal adenoma, thyroid; liver; intrahepatic biie duct;
- hepatocellular adrenal gland; stomach; gastric; glioma; glioblastoma; endometrial: melanoma; kidney; renai pelvis; urinary bladder; uterine corpus; uterine cervix; vagina; ovary; multiple myeloma; esophagus; a leukaemia; acute myelogenous leukemia; chronic myelogenous leukemia; lymphocytic leukemia; myeloid leukemia; brain; a carcinoma of the brain; oral cavity and pharynx; larynx; small intestine; non-Hodgkin lymphoma; melanoma; villous colon adenoma; a neoplasia; a neoplasia of epithelial character; lymphomas; a mammary carcinoma; basal cell carcinoma; squamous ceil carcinoma; actinic keratosis; tumor diseases, including solid tumors;
- condition or disorder is selected from the group consisting of: an epidermal hyperproliferation, prostate hyperplasia, a neoplasia, a neoplasia of epithelial character, Cowden syndrome, Lhermitte-Dudos disease or Bannayan- Zonana syndrome, asthma.
- COPD 1 ARDS Loffier's syndrome, eosinophilic pneumonia, parasitic (in particular metazoan) infestation (including tropica! eosinophil),
- bronchopulmonary aspergillosis polyarteritis nodosa (including Churg-Strauss syndrome), eosinophilic granuloma, eosinophil-related disorders affecting the airways occasioned by drug-reaction, psoriasis, contact dermatitis, atopic dermatitis, alopecia areata, erythema multiforme, dermatitis herpetiformis, scleroderma, vitiligo, hypersensitivity angiitis, urticaria, bullous pemphigoid, lupus erythematosus, pemphisus, epidermolysis bullosa acquisita ; autoimmune haematogica! disorders (e.g. haemolyttc anaemia, aplastic anaemia, pure red ceil anaemia and idiopathic thrombocytopenia), systemic lupus erythematosus,
- endocrine opthalmopathy Grave's disease, sarcoidosis, alveolitis, chronic hypersensitivity pneumonitis, multiple sclerosis, primary biliary cirrhosis, uveitis (anterior and posterior), interstitial lung fibrosis, psoriatic arthritis, glomerulonephritis, cardiovascufar diseases, atherosclerosis, hypertension, deep venous thrombosis, stroke, myocardial infarction, unstable angina, thromboembolism, pulmonary embolism, thrombolytic diseases, acute arterial ischemia, penpheral thrombotic occlusions, and coronary artery disease, reperfusion injuries, retinopathy, such as diabetic retinopathy or hyperbaric oxygen-induced retinopathy, and conditions characterized by elevated intraocular pressure or secretion of ocular aqueous humor, such as glaucoma.
- Grave's disease sarcoidosis, alveolitis, chronic hyper
- the required dosage will of course vary depending on the mode of administration, the particular condition to be treated and the effect desired In general, satisfactory results are indicated to be obtained systemically at daily dosages of from about 0.03 to 10.0 mg/kg per body weight.
- An indicated daily dosage in the larger mammal, e.g. humans, is in the range from about 0.5 mg to about 1 g, conveniently administered, for example, in divided doses up to four times a day or in retard form.
- Suitable unit dosage forms for oral administration comprise from ca. 0.1 to 500 mg active ingredient.
- the compounds of formula (I), (IA), (IA'), (IB) and/or (IC) may be administered by any conventional route, in particular enteraliy, e.g. orally, e.g.
- the compounds of formula (I), (IA), (IA ), (IB) and/or (IC) may be administered in free form or in pharmaceutically acceptable salt form e.g. as indicated above.
- Such salts may be prepared in conventional manner and exhibit the same order of activity as the free compounds.
- the invention also provides:
- a method for preventing or treating conditions, disorders or diseases mediated by the activation of the PI3, e.g. the PI3 kinase alpha enzyme e.g. such as indicated above, in a subject in need of such treatment comprises administering to said subject an effective amount of a compound of formula (i). (IA), (IA 1 ), (IB) and/or (!C) or a pharmaceutically acceptable salt thereof
- PI3K serves as a second messenger node that integrates parallel signaling pathways, evidence is emerging that the combination of a PI3K inhibitor with inhibitors of other pathways will be useful in treating cancer and proliferative diseases in humans.
- trastuz ⁇ mab has demonstrated durable responses in some patients expressing Her2/neu-ErbB2. only a subset of these patients respond. Recent work has indicated that this limited response rate can be substantially improved by the combination of trastuzumab with inhibitors of PI3K or the PI3K/AKT pathway (Chan et al., Breast Can. Res. Treat. 91:187 (2005), Woods ignatoski et ai., Brit. J. Cancer 82:666 (2000), Nagata et al., Cancer Cell 6:117 (2004)).
- a variety of human malignancies express activating mutations or increased levels of Her 1 /EGFR and a number of antibody and small molecuie inhibitors have been developed against this receptor tyrosine kinase including tarceva, gefitinib and erbitux.
- EGFR inhibitors demonstrate anti-tumor activity in certain human tumors (e.g., NSCLC), they fail to increase overall patient survival in all patients with EGFR-expressing tumors. This may be rationaiized by the fact that many downstream targets of Her1/EGFR are mutated or deregulated at high frequencies in a variety of malignancies, including the P!3K/Akt pathway.
- gefitmib inhibits the growth of an adenocarcinoma cell line in in vitro assays. Nonetheless, sub-clones of these cell lines can be selected that are resistant to gefttinib that demonstrate increased activation of the PI3/Akt pathway. Down-reguiation or inhibition of this pathway renders the resistant sub-ations sensitive to gefitinib (Kokubo et a!,, Brit. J. Cancer 92:1711 (2005)).
- AEE778 an inhibitor of Her-2/ ⁇ eu/ErbB2, VEGFR and EGFR
- RAD001 an inhibitor of mTOR. a downstream target of Akt
- Anti-estrogens such as tamoxifen, inhibit breast cancer growth through induction of cell cycle arrest that requires the action of the cell cycle inhibitor p27Kip.
- activation of the Ras-Raf-MAP Kinase pathway alters the phosphorylation status of p27Kip such that its inhibitory activity in arresting the cefi cycle is attenuated, thereby contributing to anti-estrogen resistance (Donovan, et ai, J. Biol. Chem. 276:40888, (2001)).
- the present invention provides, in a further aspect, compounds of formulae (I) : (IA), (IA'), (IB) and/or (IC) for use in the treatment of hormone dependent cancers, such as breast and prostate cancers
- hormone dependent cancers such as breast and prostate cancers
- chromosomal translocation is responsible for the constitutively activated BCR-AbI tyrosine kinase.
- CML chronic myelogenous leukemia
- chromosomal translocation is responsible for the constitutively activated BCR-AbI tyrosine kinase.
- the afflicted patients are responsive to imatinib. a small molecule tyrosine kinase inhibitor, as a result of inhibition of AbI kinase activity.
- imatinib a small molecule tyrosine kinase inhibitor
- many patients with advanced stage disease respond to imatinib initially, but then relapse later due to resistance-conferring mutations in the AbI kinase domain.
- BCR-AbI employs the Ras-Raf kinase pathway to elicit its effects.
- inhibiting more than one kinase in the same pathway provides additional protection against resistance-conferring mutations.
- the present invention provides the compounds of formulae (I), (IA), (IA'), (IB) and/or (IC) for use in combination with at least one additional agent selected from the group of kinase inhibitors, such as Gteevec®. in the treatment of hematological cancers, such as chronic myelogenous leukemia (CML).
- CML chronic myelogenous leukemia
- the invention further provides pharmaceutical compositions comprising at least one compound of formula (I), (IA), (iA 1 ), (IB) and/or (IC), together with a pharmaceutically acceptable excepient suitable for administration to a human or animal subject, either alone or together with another therapeutic agent, for example another anticancer agent.
- the invention further provides methods of treating human or animal subjects suffering from a cellular proliferative disease, such as cancer.
- the invention thus provides methods of treating a human or animal subject in need of such treatment, comprising administering to the subject a therapeutically effective amount of a compound of formula (I), (IA) 1 (IA'), (IB) and/or (IC) either alone or in combination with one or more other therapeutic agents, e.g.
- compositions writ either be formulated together as a combination therapeutic or administered separately
- Suitable anticancer agents for use with a compound of formula I include, but are not limited to, one or more compounds selected from the group consisting of kinase inhibitors, anti-estrogens, anti androgens, other inhibitors, cancer chemotherapeutic drugs, alkylating agents, chelating agents, biological response modifiers, cancer vaccines, agents for antisense therapy as set forth below:
- A. Kinase lnhibitors for use as anticancer agents tn conjunction with a compound of the formula (I), (IA), (IA'), (IB) and/or (fC) include inhibitors of Epidermal
- EGFR Growth Factor Receptor
- small molecule quinazolines for example gefitinib (US 5457105, US 5616582, and US 5770599), ZD-6474 (WO 01/32651), erlotinib (Tarceva®, US 5,747,498 and WO 96/30347), and lapatin ⁇ (US 6,727,256 and WO
- Vascular Endothelial Growth Factor Receptor (VEGFR) kinase inhibitors including SU- 11248 (WO 01/60814), SU 5416 (US 5,883,113 and WO 99/61422), SU 6668 (US 5,883,113 and WO 99/61422), CHiR-258 (US 6,605,617 and US 6,774,237), vatalanib or PTK-787 (US 6.258,812), VEGF-Trap (WO 02/57423), B43-Genistein (WO-09606116), fenretinide (retinoic acid p-hydroxyphenylamine) (US 4,323,581), IM-862 (WO 02/62826), bevacizumab or Avastin® (WO 94/10202), KRN-951, 3-[5-(methylsulfonylpiperadine methyl)- indoiyij-quinoione, AG-13736 and AG-13925, pyrroio
- Akt protein kinase inhibitors such as RX-0201
- PKC Protein Kinase C
- LY-317615 WO 95/17182
- perifosine US 2003171303
- Raf/Map/MEK/Ras kinase inhibitors including sorafenib (BAY 43-9006), ARQ-350RP, LErafAON.
- FGFR Fibroblast Growth Factor Receptor
- CDK Cell Dependent Kinase
- PDGFR Platelet-Derived Growth Factor Receptor
- Anti-Estrogens for use in anticancer therapy in conjunction with a compoound of formula (I) 1 (IA), (IA ), (IB) and/or (IC) include Selective Estrogen Receptor Modulators (SERMs) including tamoxifen, toremifene, raloxifene; aromatase inhibitors including Arimidex® or anastrozole; Estrogen Receptor Downregulators (ERDs) including Faslodex® or fulvestrant.
- SERMs Selective Estrogen Receptor Modulators
- ESDs Estrogen Receptor Downregulators
- (IA), (IA'), (IB) and/or (IC) include flutamide, bicalulamide, finasteride, aminoglutethamide, ketoconazole, and corticosteroids.
- Other tnhibitors:.Other inhibitors for use as anticancer agents in conjunction with a compound of formula ⁇ )), (IA) 1 (IA'), (IB) and/or (IC) include protein farnesy!
- transferase inhibitors including tipifarnib or R-115777 (US 2003134846 and WO 97/21701), BMS- 214662, AZD-3409. and FTI-277; topoisomerase inhibitors including merbarone and diflomotecan (BN-80915); mitotic kinesin spindle protein (KSP) inhibitors including SB- 743921 and MKI-833; proteasome modulators such as bortezomib or Velcade® (US
- Xt-784 cyclooxygenase 2 (COX-2) inhibitors including non-steroidal antiinflammatory drugs I (NSAJDs).
- NSAJDs non-steroidal antiinflammatory drugs I
- Cancer Chemotherapeutic Drugs Particular cancer chemotherapeutic agents for use as anticancer agents in conjunction with a compound of formula (I), (IA), (IA 1 ), (IB) and/or
- IC include anastrozole (Arimidex®), bicalutamide (Casodex®), bleomycin sulfate
- CiCNU® chlorambucil (Leukeran®), cisplatin (Platinol®), cladribi ⁇ e (Leustatin®), cyclophosphamide (Cytoxan® or Neosar® ⁇ , cytarabine, cytosine arabinoside (Cytosar-U®), cytarabtne liposome injection (DepoCyt®), dacarbazine (DTIC-Dome®), dactinomycin (Actinomycin D, Cosmegan), daunor ⁇ bicin hydrochloride (Cerubidine®), daunorubicin citrate liposome injection (OaunoXome®), dexamethasone, docetaxel (Taxotere®, US
- doxorubicin hydrochloride (Adriamycin®, Rubex®), etoposide (Vepesid®), fiudarabine phosphate (Fludara®), 5-f! ⁇ orouracil (Adrucil®, Efudex®), flutamide (Eulexin®), tezacitibine, Gemcitabine (diffuorodeoxycitidrne), hydroxyurea (Hydrea®), ldarubicin
- Alkylating agents for use in conjunction with a compound of formula (I), (IA), (IA 1 ), (IB) and/or (IC) include VNP-40101M or cioretizine, oxaliplatin (US 4,169,846,
- glufosfamrde. mafosfamide. etopophos (US 5.041 ,424), prednimustine; treosulfan; busulfan; irofluven (acylfulvene); penclomedine; pyrazoloacridine (PD-115934): 06-benzylguanine; decitabsne (5-aza-2-deoxycytidine); brostaHicin; mitomycin C (MiioExtra); TLK-286 (Teicyta®); temozolomide: trabectedfn (US 5,478,932); AP-5280 ⁇ Piatinate formulation of Cisplatin); porftromycin; and dearazide (meclorethamine).
- Chelating Agents for use in conjunction with a compound of formula (I), (IA), (IA 1 ), (IB) and/or (IC) include tetrathiomolybdate ⁇ WO 01/60814); RP-697; Chimeric T84.66 (CT84.66); gadofosveset (Vasovist®); deferoxamine; and bleomycin optionally in combination with eiectorporatton (EPT).
- H. Biological Response MocHfiers J3iological response modifiers, such as immune modulators, for use in conjunction with a compound of formula (I), (IA), (IA ! ), (IB) and/or (IC) include staurosprine and macrocy ic analogs thereof, including UCN-01, CEP-701 and midostaurin (see WO 02/30941 WO 97/07081 , WO 89/07105, US 5,621 ,100, WO
- IL-10, IL-11 , IL-12, and active biological variants thereof having amino add sequences greater than 70% of the native human sequence; aStr ⁇ tamine (Hexaie ⁇ ®); SU 101 or ieflunomide (WO 04/06834 and US 6,331,555); imidazoquinolines such as resiquimod and imiquimod (US 4,689,338, 5.389,640, 5,268,376, 4,929,624.
- SMIPs 5 including benzazoles, a ⁇ thraqui nones, thiosemicarbazones, and tryptanthrins (WO 04/87153, WO 04/54759, and WO 04/60308).
- Anticancer vaccines for use in conjunction with a compound of formula (!), (IA), (IA 1 ), (IB) and/or (IC) include Avicine® (Tetrahedron Lett. 26:2269-70 (1974));
- oregovomab (OvaRex®); Theratope® (STn-KLH); Melanoma Vaccines; Gi-4000 series (Gl- 4014, GI-4015 : and Gi-4016), which are directed to five mutations in the Ras protein;
- GlioVax-1; MelaVax; Advexin® or INGN-201 (WO 95/12660): Sig/E7/LAMP-1 , encoding HPV-16 E7; MAGE-3 Vaccine or M3TK (WO 94/05304); HER-2VAX; ACTIVE, which stimulates T-cells specific for tumors; GM-CSF cancer vac ⁇ ne; and Listeria monocytogenes- based vaccines.
- J. A ⁇ tisense Therapy for use in conjunction with a compound of formula (I).
- (!A), (IA'), (IB) and/or (IC) also include anttsense compositions, such as AEG-35156 (GEM-640); AP-12009 and AP-11014 (TGF-beta2-specific antisense oligonucleotides); AVI- 4126; AVI-4557; AVt-4472; obitmersen (Genasense®); JFS2; apri ⁇ ocarsen (WO 97/29780); GTI-2040 (R2 ribonucleotide reductase mRNA antisense oligo) (WO 98/05769); GTt-2501 (WO 98/05769); iiposome-encapsulaled c-Raf antisense oitgodeoxy ⁇ cleotides (LErafAON) (WO 98/43095); and Sima-027
- bronchiodilatory or antihistamine drugs substances include anticholinergic or antimuscarinic agents, in particular glycopyrrolate, ipratropium bromide, oxiiropium bromide, and tiotropium bromide, OrM3.
- aclidinium, CHF5407, GSK233705 and ⁇ -2- adrenoreceptor agonists such as salbutamol, terbutaline, salmeterol, carmoteroi, milveterof and, especially, indacaterol and forn ⁇ oterol.
- Co-therapeutic antihistamine drug substances include cetirizine hydrochloride, clemastine fumarate, promethazine, loraiadine, desloratadine diphenhydramine and fexofenadine hydrochloride.
- the invention provides in a further aspect a combination comprising a compound of formula (I). ('A), (IA'), (IB) and/or (IC) and one or more compounds that are useful for the treatment of 3 thrombolytic disease, heart disease, stroke, etc.
- Such compounds include aspirin, a streptokinase, a tissue plasminogen activator, a urokinase, a anticoagulant, antiplatelet drugs (e.g, PLAVfX; clopidogrel bisulfate), a statin (e.g., LIPITOR or Atorvastatin calcium), ZOCOR (Simvastatin), CRESTOR (Rosuvastatin), etc.), a Beta blocker (e.g., Atenolol), NORVASC (amlodipin ⁇ besyiate), and an ACE inhibitor (e.g., fisinopril)
- the invention provides in a further aspect a combination comprising a compound of formula (I), (IA), (IA 1 ), (iB) and/or (IC) and one or more compounds that are useful for the treatment of antihypertension.
- Such compounds include ACE inhibitors, lipid lowering agents such as statins. LlPITOR ⁇ Atorvastatin calcium), calcium channel blockers such as NORVASC (amlodipine besyiate).
- the invention provides in a further aspect a combination comprising a compound of formula (I) 1 ((A), (IA'), (IB) and/or (IC) and one or more compounds selected from the group consisting of fibrates, beta-blockers, NEPI inhibitors, Angiotensin-2 receptor antagonists and plateiet aggregation inhibitors.
- the invention provides in a further aspect a combination comprising a compound of formula (I) 1 (IA), (IA 1 ), (IB) and/or (!C) and a compound suitable for the treatment of inflammatory diseases, incfuding rheumatoid arthritis.
- Such compound may be selected from the group consisting of TNF- ⁇ inhibitors such as anti-TNF- ⁇ monoclonal antibodies (such as
- NSAIDS nonsterodial anti-inflammatory agents
- piroxscam diclofenac, naproxen, flurbiprofen, fenoprofen, ketoprofen ibuprofen, fenamates, mefenamic acid, indomethacin, s ⁇ iindac, apazone, pyrazolones, phenylbutazone, aspirin, COX-2 inhibitors (such as CELEBREX (celecoxib), PREXIGE (lumiracoxib)), metalloprotease inhibitors (preferably MMP-13 selective inhibitors), p2x7 inhibitors, ⁇ 2 ⁇ nhibitors,
- NEUROTIN pregabalin, low dose methotrexate, leflunomide, hydroxyxchioroquine, d- peniciilamine, auranofin or parenteral or orai gold.
- the invention provides in a further aspect a combination comprising a compound of formula (I), (IA), (IA'). (IB) and/or (IC) and a compound suitabfe for the treatment of osteoarthritis.
- Such compound may be selected from the group consisting of standard non-steroidal antiinflammatory agents (hereinafter NSAID's) such as piroxicam, diclofenac, propionic acids such as naproxen, flurbiprofen, fenoprofen, ketoprofen and ibuprofen, fenamates such as mefenamic acid, indomethacin, suiindac, apazone.
- NSAID's standard non-steroidal antiinflammatory agents
- piroxicam such as piroxicam, diclofenac, propionic acids such as naproxen, flurbiprofen, fenoprofen, ketoprofen and ibuprofen
- fenamates such as mefenamic acid, indomethacin, suiindac, apazone.
- the invention provides in a further aspect a combination comprising a compound of formuia (I) 1 (IA). (IA'), (IB) and/or (IC) and an antiviral agent and/or an antisepsis compound
- antiviral agent may be selected from the group consisting of Viracept, AZT, acyclovir and famciclovir.
- antisepsis compound may be selected from the group consisting of Valant.
- the invention provides in a further aspect a combination comprising a compound of formuia (I), (IA). (IA 1 ), (IB) and/or (1C) and one or more agents selected from the group consisting of CNS agents such as antidepressants (sertraline), a ⁇ ti-Parkinsonian drugs (such as deprenyi, L-dopa, Requip, Mirapex; MAOB inhibitors (such as selegine and rasagiline); comP inhibitors (s ⁇ ch as Tasmar); A-2 inhibitors; dopamine reuptake inhibitors; NMDA antagonists: Nicotine agonists; Dopamine agonists; and inhibitors of neuronal nitric oxide synthase).
- CNS agents such as antidepressants (sertraline), a ⁇ ti-Parkinsonian drugs (such as deprenyi, L-dopa, Requip, Mirapex; MAOB inhibitors (such as selegine and rasagiline);
- the invention provides in a further aspect a combination comprising a compound of formula (I), (!A), ⁇ )A'), (IB) and/or (IC) and one or more anti-Alzheimer's drugs.
- anti-Aizheimer Drug may be selected from the group consisting of donepezil, tacrine, ⁇ 20inhibitors, NEURO ⁇ IN, pregabaiin, COX-2 inhibitors, propentofyiiine or metryfonate.
- the invention provides in a further aspect a combination comprising a compound of formula (I). (IA), (IA'), (IB) and/or (IC) and anosteoporosis agents and/or an immunosuppressant agent.
- osteoporosis agents ma be selected from the group consisting of EVfSTA (raloxifene hydrochloride), droioxifene, fasofoxifene or fosomax.
- Such immunosuppressant agents may be selected from the group consisting of FK-506 and rapamycin.
- kits that include one or more compound of formula (I) 1 (IA), (IA'), (IB) and/or (IC) and a combination partner as disclosed herein are provided.
- Representative kits include a P!3K inhibitor compound (e.g.. a compound of formuia (I), (SA), (IA"), (IB) and/or (IC)) and a package insert or other labeling including directions for treating a cellular proliferative disease by administering a PI3K inhibitory amount of the compound(s).
- the compounds of formula (I), (IA), (IA'), (IB) and/or (IC) will be administered in a therapeutically effective amount by any of the accepted modes of administration for agents that serve similar utilities.
- the actual amount of the compound of formula (I), (IA), (1A ! ), (IB) and/or (IC). i.e.. the active ingredient will depend upon numerous factors such as the severity of the disease to be treated, the age and relative health of the subject, the potency of the compound used, the route and form of administration, and other factors.
- the drug can be administered more than once a day, preferably once or twice a day. All of these factors are within the skill of the attending clinician.
- Therapeutically effective amounts of compounds of formulas I may range from about 0.05 to about 50 mg per kilogram body weight of the recipient per day, preferably about 0.1-25 mg/kg/day, more preferably from about 0.5 to 10 mg/kg/day. Thus, for administration to a 70 kg person, the dosage range would most preferably be about 35-70 mg per day.
- compounds of formula (I), (IA) 1 (IA'), (IB) and/or (IC) will be administered as pharmaceutical compositions by any one of the following routes: oral, systemic ⁇ e.g., transdermal, intranasal or by suppository), or parenteral (e.g., intramuscular, intravenous or subcutaneous) administration.
- compositions can take the form of tablets, pills, capsules, semisolids, powders, sustained release formulations, solutions, suspensions, elixirs, aerosols, or any other appropriate compositions.
- Another preferred manner for administering compounds of the formula I is inhalation. This is an effective method for delivering a therapeutic agent directly to the respiratory tract.
- the compound can be formulated as liquid solution, suspensions, aerosol propel Ian ts or dry powder and loaded into a suitable dispenser for administration.
- suitable dispenser for administration There are several types of pharmaceutical inhalation devices-nebulizer inhalers, metered dose inhalers (MDf) and dry powder inhalers (DPI).
- MDf metered dose inhalers
- DPI dry powder inhalers
- Nebulizer devices produce a stream of high velocity air thai causes the therapeutic agents (which are formulated in a liquid form) to spray as a mist that is carried into the patient's respiratory tract.
- MDI's typically are formulation packaged with a compressed gas. Upon actuation, the device discharges a measured amount of therapeutic agent by compressed gas. thus affording a reliable method of administering a set amount of agent.
- DPI dispenses therapeutic agents in the form of a free flowing powder that can be dispersed in the patient's inspiratory air-stream during breathing by the device.
- the therapeutic agent is formulated with an excipient such as lactose.
- a measured amount of the therapeutic agent is stored in a capsule form and is dispensed with each actuation.
- the inventions also relates to formulations wherein the particle size of a compound of formula I between 10 - 1000 nm, preferably 10 - 400 nm.
- Such pharmaceutical formulations have been developed especially for drugs that show poor bioavailability based upon the principle that bioavailability can be increased by increasing the surface area i.e., decreasing particle size.
- U.S. 4,107,288 describes a pharmaceutical formulation having particles in the size range from 10 to 1.000 nm in which the active material is supported on a crosslinked matrix of macromolecules.
- 5,145,684 describes the production of a pharmaceutical formulation in which the drug substance is pulverized to nanoparticles (average particle size of 400 nm) in the presence of a surface modifier and then dispersed in a liquid medium to give a pharmaceutical form ⁇ iation that exhibits remarkably high bioavailability. Both documents are included by reference.
- the invention provides pharmaceutical compositions comprising a ⁇ therapeutically effective amount) of a compound of formula (I), (IA) 1 (IA'), (IB) and/or (IC) 1 and at least one pharmaceutically acceptable excipient.
- Acceptable excipients are non-toxic, aid administration, and do not adversely affect the therapeutic benefit of the compound of formula (I), (IA), (IA'), (IB) and/or (IC).
- excipieni may be any solid, liquid, semi-solid or, in the case of an aerosol composition, gaseous excipient that is generally available to one of skill in the art.
- Solid pharmaceutical excipients include starch, cellulose, talc, glucose, lactose, sucrose, gelatin, mail, rice, flour, chalk, silica gel, magnesium stearate, sodium stearate, glycerol monostearate, sodium chloride, dried skim milk and the like.
- Liquid and semisolid excipients may be selected from glycerol, propylene glycol, water, ethanol and various oiis, including those of petroleum, animal, vegetable or synthetic origin, e.g., peanut oil, soybean oil, mineral oil, sesame oil, etc.
- Preferred liquid carriers, particularly for injectable solutions include water, saline, aqueous dextrose, and glycols.
- Compressed gases may be used to disperse a compound of the formula I in aerosol form. Inert gases suitable for this purpose are nitrogen, carbon dioxide, etc.
- Other suitable pharmaceutical excipients and their formulations are described in Remington's
- the amount of the compound in a formulation can vary within the full range employed by those skilled in the art.
- the formulation will contain, on a weight percent (wt%) basis, from about 0.01-99.99 wt% of a compound of formula ! based on the total formulation, with the balance being one or more suitable pharmaceutical excipients.
- the compound is present at a level of about 1-80 wt%.
- the invention further relates to pharmaceutical compositions comprising (i.e. containing or consisting of ) at least one compound of formula (I), (IA), (IA'), (IB) and/or (IC) and at least one pharmaceutically acceptable excipient.
- Pharrnaceuticai compositions comprising a compound of formula (I), (IA), (IA 1 ), (IB) and/or (IC) in free form or in pharmaceutical t ⁇ acceptable salt form in association with at least one pharmaceutical acceptable excipie ⁇ t (such as a carrier and/or diluent) may be manufactured in conventional manner by mixing the components.
- compositions comprising a compound of formula (I), (IA), (IA ! ), (IB) and/or (!C) in free form or in pharmaceutically acceptable salt form and further comprising a combination partner (either in one dosage unit form or as a kit of parts) in association with at least one pharmaceutical acceptable carrier and/or diluent may be manufactured in conventional manner by mixing with a pharmaceutically acceptable carrier and/or diluent with said active ingredients.
- a combined pharmaceutical composition e.g. for use in any of the methods described herein, comprising a compound of formula (I), (IA), (IA 1 ). (IB) and/or (IC) in free form or pharmaceutically acceptable salt form in association with a pharmaceutically acceptable diluent and/or carrier.
- Such combined pharmaceutical composition may be in the form of one dosage unit form or as a kit of parts.
- a combined pharmaceutical composition comprising a therapeutically effective amount of a compound of formula (I), (IA), (IA'), (IB) and/or (IC) in free form or in
- a pharmaceutical combination e.g. a kit, comprising a) a first agent which is a
- kit may comprise instructions for its administration.
- Method A2 method Fast4jM 00-900 and method Fast4a_pn_100-900:
- Method B (preparative HPLC) Instrument: Waters preparative HPLC system, column; SunfireTM Prep C18 OBDTM 5 micron 30 X 100 mm, temperature: 25 0 C, eiueni: gradient from 5 - 100% CH 3 CN in 0,05% aqueous TFA over 20 minutes, flow rate: 30 ml/minute, detection: UV 254 nm.
- Method C (preparative HPLC) Instrument: Waters preparative HPLC system, column: SunfireTM Prep C18 OBDTM 5 microm 30 X 100 mm, temperature: 25 0 C, eluent: gradient from 5 - 50% CH 3 CN in 0.05% aqueous TFA over 20 minutes, flow rate: 30 ml/minute, detection: UV 254 nm.
- Method D Analytical HPLC: Linear gradient 2-100% CH 3 CN (0.1%TFA) and H 2 O (0.1% TFA) in 5 min + 1.5 min 100% CH 3 CN (0.1%TFA); detection at 215 nm, flow rate 1 mL/min at 30 0 C.
- Method E Preparative HPLC/MS Instrument: Gilson preparative HPLC system, column: SunfireTM Prep C18 OBDTM 5 micron 30 X 100 mm, temperature: 25 ⁇ C.
- Method F Analytical HPLC Instrument: Shlmadzu SIL-10A, Method: Linear gradient 2- 100% CH 3 CN (0.1%TFA) and H 2 O (0.1% TFA) in 4 min + 2 min 100% CH 3 CN (0.1%TFA); back to -100% CH 3 CN (0.1%TFA) in 3 min.; detection at 215 nm, flow rate 2 mL/min at RT. Column: NucleosH OD-5-100 C18 (150 x 4.6 mm) Method G (Analytical HPLC) Instrument:
- Eiuent B CH 3 CN 1 containing 0.1 % v/v TFA
- Eiuent B CH 3 CN, containing 0.1 % v/v HCOOH
- Stage A,2 N'- ⁇ 6-[1 ⁇ Dimethyiam ⁇ no-meth- ⁇ E)-ylidene] ⁇ 7-oxo-4,5,6,7-tetrahydro-benzothia2:ol- 2-yi ⁇ -N,N-dimethy)-formamidine
- Potassium carbonate (0.434 g, 3.14 mmot) was added to a mixture of N- ⁇ 8-tert-butyl-4,5- dihydro ⁇ thiazoio[4,5-h]quinazolin ⁇ 2-yl) ⁇ acetamide (Stage A.3, 0.38 g, 1.257 mmoi) in MeOH.
- the RWt was stirred at 50 0 C for 52 h, then cooied to rt and evaporated in vacuo to give a red mass. Water (20 mL) was added and the mixture was stirred at rt for a further 3 h. The red suspension was then cooled down to 4 0 C and filtered to give after drying under high vacuum the title compound as a beige solid.
- LiHMDS solution (1 M, 27.7 mL) was added over 10 min to a suspension of N-(7-oxo- 4,5,6,7-tetrahydro ⁇ benzothiazol-2-yi)-acetamtde (Stage A.5, 2.0 g, 9.23 mmol) in dry THF (20 mL) cooled at - 78 0 C under an argon atm.
- the RM was then stirred at - 78 0 C for 2.5 h and methyl formate (2.308 mL, 36.9 mmoi) added dropwise over 30 rnin.
- the RM was then warmed slowfy to rt and was then stirred 18 h at rt.
- Stage G.1 ⁇ 3R,7aR)-7a-Methoxymethyl ⁇ 3 ⁇ trichloromethyl-tetrahydro-pyrrolo[1 ,2- ⁇ xazol ⁇ 1 ⁇ one
- Stage H.1 (3R,7aR)-7a-Dimethylaminomethyl-3-trich!oromethyl-tetrahydro-pyrrolo[1 ,2- c]oxazoi-1-one
- the RM was taken up in DCM, and partitioned with 1 M NaOH extracting once more with DCM. The organic layers were combined then washed twice with water before being dried over Na 2 SO 4 . The solution was evaporated to half of its volume and 1 M HCI in H ? O was added, the layers separated and the aqueous layer washed twice with DCM. The pH of the aqueous layers were adjusted to ⁇ 8 with saturated Na 2 CO 3 solution and extracted three times with DCM. The organic layers were dried over Na 2 SO 4 and evaporated, to give the desired title product as a pale yellow oil.
- Stage J.1 (3R,7aR)-7a ⁇ Hydroxymethyi-3-trichioromethyl-tetrahydro-pyrrolo[1 ,2-cjoxazoM - one
- Stage K.2 ⁇ 3R,7aR)-7a-[ ⁇ 3-Fluoro-benzylamino)-methyi]-3-trtchioromethyl-tetrahydro- pyrrolo[1 ,2-cloxazo!-1 -one
- Sodium triacetoxyborohydride (544 mg, 2.57 mmol) was added to (3R.7aR)-1-oxo-3- trichloromethykiihydro-pyrrolop ⁇ -cjoxazole ⁇ a-carbaldehyde ⁇ obtained as described in J Org. Chem.
- the RM was then allowed to warm to rt, and stirred at rt for a further 15 min. before (2S.3R)-3-methyl-1 -((S)- 1 -phenyi-ethyO-pyrrolidine ⁇ -carboxylic acid methyl ester (prepared as described in Tetr. Lett. 1997, 38 (1), 85-88; 1.6 g.
- N-(6-Bromo-7-oxo-4.5,6,7-tetrahydro-benzothiazol-2-yi)-acetamide (Stage T.3, 473 mg, 1.635 mmoi) was dissolved in MeOH (10 mL), 2 : 2 ⁇ dtmethylthio propionamide (230 mg, 1.962 mmol) and ammonium phosphomoiybdate (307 mg. 0.164 mmol) were added, and the RM was stirred at 25 0 C for 20 h. The RM was then stood for 2 days before stirring at 50 ⁇ C for 24 h. The mixture was extracted with EtOAc/H 2 O. The organic layers were dried over Na 2 SO 4 and evaporated.
- N- ⁇ 7-Oxo-4,5,6,7-tetrahydro-benzothiazoi-2-yi)-acetamide (Stage T.4, 2.286 g. 10.87 mmo!) was dissolved in AcOH ⁇ 60 mi), then bromine (1.74 g, 10.87 mmoi) dissolved in AcOH (10 mL) were slowly added and the RM was heated to 75 0 C for 20 h. The color changed from red to beige. The mixture was evaporated and the residue was dissolved in MeOH (10 mL) and precipitated with H 2 O. The mixture was filtered and dried on HV. The crude material was chromatographed with MPLC C18 H 2 O 0.1% TFA / CH 3 CN 0.1% TFA 1 gradient 0-50%.
- the title compound was prepared by the procedure of Boys, M. L., Downs, V. L. Synth. Commun. 200S, 36, 295.
- Sodium hydrogen sulphide hydrate (3.89 g. 69.4 mmol, hygroscopic) was added to a solution of 3-fiuoro-2,2-dimeihyI-propionit ⁇ ie (Stage U.3, 1.17 g, 11.57 mmo! and diethyl amine hydrochloride (7.61 g, 69.4 mmol) in 1 ,4-dioxa ⁇ e (7 mL) and H 2 O (7 mL) at rt.
- the RM was heated to 55 °C and then stirred for 3 days at this temperature.
- Example 7 d 6 -(R)-2-Dimethylaminomethyf-pyrrolidine-1 ,2-dicarboxylic acid 2-amide 1-[(8- tert-butyl-4,5-dihydro-thiazoio[4,5-hjquinazolin-2-yl)-amide] - 63
- Imidazo)e-1 -carboxylic acid (8-tert-butyt-4,5-drhydro-thiazoio[4,5-hIquinazolin-2-yf)-amide (Intermediate A, 91 mg, 0.256 mmol) and triethylarntne (0.036 mL, 0.256 mmo! were added to de- ⁇ R)-2-dimethylamtnomethyl-pyrro!idine-2-carboxylic acid amide (Intermediate I, 50 mg, 0.282 mmof) suspended in DMF (2 mL) under an argon atm. The RM was then stirred for 275 h at 40 0 C and then purified directly by preparative HPLC twice (method B and then method C).
- Example 18 (IS. ⁇ RJ- ⁇ -Aza-bicydo ⁇ . i.OJhexane-i ⁇ -dicarboxylic acid 1-amide 2 ⁇ [(8-tert- butyl-4,5-dihydro-thiazolo[4,5-h]quinazolin-2-yl)-amide] - 68 -
- Example 23 5-Phenyl-py ⁇ Oiidine-1,2-dicarboxyi*c acid 2-amide 1 ⁇ [(8-diethylamino-4,5- df hyd ra-thiazolo[4 , 5-hjq uinazof in ⁇ 2-y l)-amide 3
- Example 42 50.2 mg, 0.264 mmoi) and triethylamine (0.074 mL, 0.528 mmol).
- the RM was stirred at 40 0 C for 2 h and then directiy purified by preparative HPLC (method B).
- the product containing fractions were passed through a Bond Elut - SCX cartridge.
- the cartridge was then eluted with a 7 M ammonia solution in WIeOH.
- the solution was evaporated and the residue was triturated in DCM to give the title compound as a yellow solid.
- LCMS: t « 0.99 min and M+H 492.0 (method A2).
- Example 24 Azetidine-1,2-dicarboxy!ic acid 2-amide 1-[(8-tert-butyl-4,5-dihydro-thiazolo[4,5- h]qutnazo!in-2-yi)-amide]
- Example 29 ⁇ S)-2-Methyl-pyrroffdtne-1,2-dicarboxylic acid 2-amide 1-[(7-terf-butyi-4,5- dthydro-benzo[1,2-d;3,4-d']bisthiazo!-2-yl)-amide3
- the titie compound was synthesized in a similar manner as described for Example 34 using intermediate O instead of intermediate D.
- Example 36 (2S,3S ⁇ -3-(Acetyiamino-methyl)-pyrro ⁇ idine-i ,2-dicarboxy!fc acid 2-amide 1-[ ⁇ 8- tert-buty ⁇ -4,5-dihydro-thiazoJo[4,5-h ⁇ quinazoiin-2-yl)-amide] - 77 -
- Triethylamine (0.339 mmol) was added to a solution of imidazole- 1-carboxylic acid (8-tert- buty!-4,5-dihydro-thiazoiot4,5-h3quina2 ⁇ iin-2-yt)-amide (intermediate A) (0.113 mmot) and (2S,3S)-3-(aoetylamino-methyl)-pyrrofidi ⁇ e-2-carboxyiic acid amide (Stage 36.1) (0.135 mmol ⁇ at rt. After stirring for 85 min, the reaction mixture was concentrated. The residue was purified by silica gel column chromatography followed by trituration with Et 2 O to afford the title compound as a yellow solid. HPLC-.
- Trimetnyialuminum in toluene (2 M, 15.95 mmol) was added dropwise to a mixture of NH n CI (15.95 mmol) in toluene (2 mL) at 0 0 C with the formation of methane gas.
- Triethylamine (0.141 mmol) was added to a solution of imidazole- 1-carboxylic acid ⁇ B-tert- butyi-4,5-dthydro-thiazolo[4,5-h]quinazolin-2-yl)-amide (intermediate A) (0.141 mmol) and - 80 -
- Stage 37.2 f2S.3S)-3-lv1orphoiin-4-vlmethvl-1-f(S)-1-phenyl-ethyl)-pyrrolidine-2-carboxylic acid amide
- Trimethylaluminum in toluene (2 M 1 2.89 mmol) was added dropwise to a mixture of NH 4 CI (2.89 mmoi) in toiuene (3 mL) at 0 0 C with the formation of methane gas.
- the reaction mixture was allowed to warm to rt, stirred for a further 15 min and then sfowly treated with a solution of (2S,3S)-3-morpholin-4-yimethyi-1-((S)-1-phenyl-ethyl)-pyrrolidine-2-carboxylic acid methyl ester (Stage 37.3) (1.444 mmol) in toluene ⁇ 9 mL).
- StaaeJZJ (2S,3S ⁇ -3-Morpholin-4-ylmethyi-1 -((S)- 1 ⁇ phenyl-ethyl)-pyrroltdine-2-carboxy!ic acid methyl ester
- Example 40 ⁇ 2S,3R)-3-Methy!-pyrroiidine ⁇ 1 ,2-dicarboxylic acid 2-amide 1 ⁇ [ ⁇ 8-methyl-4H-5- oxa-14hia-3,7 ⁇ liaza-cyclopenta ⁇ a]naphthaten-2-yl)-amide]
- the title compound was prepared starting from imidazoie-1-carboxySic acid (8-methyl-4H-5- oxa ⁇ 1-thia-3,7-diaza-cyciopenta[a]naphthaien-2-yl)-arnide (Stage 40.1) using synthetic methodology described in the preparation of Example 20.
- Staoe 40.5 4- Bromo-5-methoxy methox y-2 -methyl-py rid i ne
- Triethylamine (0.525 mmoi) was added to a solution of imidazoles -carboxylic acid (8-tert- butyl-4,5-dihydro-thiazolo[4,5 ⁇ h ⁇ quinazolin-2-yl)-amide (Intermediate A) (0.175 mmol) and (aS.SRJ-S-methoxymethyl-pyrrolidine ⁇ -carboxyiic acid amide (Stage 42.1) (0.192 mmol) in DMF (0.7 mL) at rt. After stirring for 3 h, the reaction mixture was concentrated. The residue - 86 - was purified by silica gel column chromatography to afford the title compound as a white solid.
- Trieihyiamine ⁇ 0.305 mmoi was added to a solution of imidazole-1-carboxylic acid (8-tert- butyM,5-dihydro-thtazolo[4,5-h]quinazobn-2-yl)-amide (Intermediate A) ⁇ 0.102 mmol) and (2S.3S)-3-dfmethylaminomethy1-pyrro!idine-2 ⁇ carboxylic acid amide ⁇ Stage 43.1 ) (0.102 mmoi) in DMF (0.3 mL) at rt. After stirring for 0.5 h, the reaction mixture was concentrated and dried overnight under vacuum at 50 ⁇ C.
- the tilfe compound was prepared in analogy to the procedure described in Stage 37.1 but
- Example 44 (2S.3R)-3 ⁇ Methyl-pyrroiidine-1.2-dicarboxylic acid 2-amide 1- ⁇ [8-(2,2,2-trifluoro- 1 , 1 -dimethyl-ethyl)-4,5-dihydro-thiazoio[4,5-h]qu ⁇ nazolin-2-yl]-amide ⁇ - 89 -
- Triethylamine ⁇ 1.714 mmof was added to a solution of imidazole-1-carboxylic acid [8- ⁇ 2.2 ,2-trifluoro-1.1-dimethyf-ethyl)-4,5-dfhydro-thiazoio[4.5-hJquinazo!in-2-yl3-amfde (Stage 44.1) (0.490 mmol) and ⁇ 2S,3R)-3 ⁇ nnethyf-pyrrofidine-2 ⁇ carboxyKc acid amide (intermediate P) (0.979 mmol) in DMF (1.5 mL) at rt. After stirring for 1.5 h, the reaction mixture was concentrated.
- Oxaly! chloride (140.8 mmoi) was added dropwise to a solution of 3,3.3-i ⁇ ffuoro-2,2- dimethyi-propionic acid [889940-13-0] (128 mmoi) in CHjCI 2 (128 ml.) at 0 0 C. Added a few drops of DMF until gas evolution was observed and then continued stirring for 30 min. After warming to rt and stirring overnight, the reaction mixture was concentrated (4OX. 00 mbar). The residue was dissolved in THF (128 ml_), cooled to OT and then slowiy treated with a solution of concentrated aqueous ammonia (64 mL).
- Triethyiami ⁇ e (1714 mmoi) was added to a solution of imidazoie-1-carboxyiic acid [8-(2,2 ,2 ⁇ triftuoro-1.1-dimethyl-ethy!-4,5-dihydro-thiazoio[4,5-h]quina2 ⁇ tfn-2-yl ⁇ -amide (Stage 44.1) (0.490 mmoi) and (2S,3R)-3-methoxymethyl ⁇ pyrrolidtne-2 ⁇ carboxy!ic acid amide (Stage 42.1) (0.0.979 mmof) tn DMF (1.5 mL) at it After stirring for 2 h, the reaction mixture was concentrated.
- the titie compound was prepared from 2-tert-buty!-5-methoxymethoxy-pyridine using synthetic methodology as described for the preparation of Example 40.
- the starting material, 2-tert-butyl-5-methoxymethoxy-pyridine was prepared from 2-bromo-5- methoxymethoxy-pyridine as described befow.
- Example 46 The title compound was prepared using synthetic methodology described for the preparation of Example 46 and using ⁇ 2S,3S) ⁇ 3-dimethylaminomethyl ⁇ pyrrolidine-2-carboxylic acid amide (Stage 43.1) instead of (2S.3R)-3-methyl-pyrro!idine-2-carboxylic acid amide in the last step of the synthesis.
- Example 48 (2S : 3R)-3-Methyl-pyrrolidine-1,2-dicarboxylic acid 2-amide 1- ⁇ [8-(2,2,2-trifluoro- 1 , 1 -dimethyi-ethyl)-4H-5-oxa-1 -thia-3,7-diaza-cyclopentata3naphthalen-2-yl]-amide ⁇ - 93 -
- the title compound was prepared starting from 4-bromo-5-methoxyme.hoxy-2- ⁇ 2,2,2- t ⁇ fluoro-1,1-dimethyl-ethyl)-pyridine using synthetic methodology as described for the preparation of Examples 40 and 42.
- 4-8romo-5-methoxymetboxy-2- ⁇ 2,2,2-trifluoro-1 ,1 -dtmetbyi-ethyl)-pyridine was prepared as follows.
- the title compound was prepared from 2,2-dimethyl-thiopropionamide using synthetic methodology as described for the preparation of Example 39.
- the starting material, 3,3,3- trifluoro ⁇ -dimethyi-thiopropionamide was prepared as described befow:
- PI3K KinaseGio assay 50 nL of compound dilutions were dispensed onto black 384-well low volume Non Binding Styrene (NBS) plates (Costar Cat. No. NBS#3676). L-a- ph ⁇ sphatidyiinosito! (Pl) 1 provided as 10 mg/mi solution in methanol, was transferred into a glass tube and dried under nitrogen beam. It was then resuspended in 3% OctylGlucoside (OG) by vortexing and stored at 4 D C.
- NBS Non Binding Styrene
- the KinaseGio Luminescent Kinase Assay (Promega, Madison/Wi, USA) is a homogeneous HTS method of measuring kinase activity by quantifying the amount of ATP remaining in solution following a kinase reaction,
- the PI3K ⁇ f PI3K ⁇ and PI3KS constructs are fusion of p85 ⁇ iSH2 domain and the respective p110 isoforms.
- the ⁇ 85 ⁇ fragment and p110 is ⁇ form genes were generated by PCR from first strand cDNA generated by RT-PCR from commercial RNA from placenta, testis and brain as described videyak.
- the PI3K ⁇ construct was obtained from Roger Williams lab, MRC Laboratory of Molecular Biology, Cambridge, UK (November, 2003) and is described (Pacold, Michael E.; Sappel, Sabine; Perisic, Olga; Lara-Gonzalez, Samuel; Davis, Colin T.; Walker, Edward H.; Hawkins, Phillip T.; Stephens, Len; Eccleston, John F.; Wifliams, Roger L. Crystal structure and functional analysis of Ras binding to its effector phosphoinositide 3-kinase gamma. Cell (2000), 103(6), 931-943).
- e cons ruc or acu ov rus - was genera e y a ree-par ligation comprised of a p85 fragment and a p110o fragment cloned into vector pBiue8ac4.5.
- the p85 fragment was derived from plasmid p 1661-2 digested with Nhe/Spe.
- the p110 ⁇ fragment derived from is clone was verified by sequencing and used in a LR410 as a Spel/Hindlll fragment.
- the gateway LR reaction to transfer the insert into the Gateway adapted pBlueBac4.5 (Invitrogen) vector was used, for the generation of the baculovirus expression vector LR410 the gateway LR reaction to transfer the insert into the Gateway adapted pBlueBac4.5 (Invitrogen) vector was used,.
- the cloning vector pBlueBac4.5 (Invitrogen) was digested with Nhe/HindlH. This resulted in the construct PED 153.8.
- the p85 component (iSH2) was generated by PCR using ORF 318 ⁇ described above) as a template and one forward primer KAC 1028 (5'- GCTAGCATGCGAGAATATGATAGAT-TATATGAAG-AATATACC) (SEQ ID NO. 1) and two reverse primers, KAC1029 ( ⁇ '-GCCTCCACCAC-CTCCGCCTG- GTTTAATGCTGTTCATACGTTTGTC) (SEQ ID NO.
- the p110 ⁇ cloning fragment was generated by enzymatic digest of clone LR410 (see above) with Spe I and Hindlii.
- the Spel site is in the coding region of the p110 ⁇ gene.
- the resulting fragment was gel-isolated and purified for sub-cloning.
- the cloning vector, pBlueBac4.5 (Invitrogen) was prepared by enzymatic digestion with
- the cut vector was purified with Qiagen column and then dephosphorylated with Calf Intestine aJkaitne phosphatase (CiP) (BioLabs). After completion of the CtP reaction the cut vector was again column purified to generate the final vector. A three-part ligation was performed using Roche Rapid ligase and the vendor specifications. The final piasmid was verified by sequencing.
- BV949 PCR products for the inter SH2 domain (iSH2) of the p85 P!3K ⁇ , PI3K ⁇ and Pi3K ⁇ subunii and for the fuli-fength p110 ⁇ subunit were generated and fused by overlapping PCR.
- the iSH2 PCR product was obtained from first strand cDNA generated by RT-PCR from commercial human RNA from placenta, testis and brain (Clontech), initially using primers gwG130-p01 (5 1 -
- CAGTTTCATAATGCCTCCTGCT -3 ' (SEQ ID No. 9) which contains linker sequences and the 5'end of p110 ⁇ and gwG130-p06 (5'- AGCTCCGTGATGGTGATGGTGATGTGCTCCAGATC-TGTAGTCTTTCCGAA-
- CTGTGTG-3 1 (SEQ ID No. 10) which contains sequences of the 3 ! end of p110- ⁇ fused to a Histidine tag.
- the p85-iSH2/ p110 ⁇ fusion protein was assembled by an overlapping PCR a reaction of the linkers at the 3'end of the iSH2 fragment and the 5'end of the p110 ⁇ fragment, using the above mentioned gwG130- ⁇ 03 primer and a primer containing an overlapping Histidine tag and the AttB2 recombination sequences (5' ⁇
- BV1060 PCR products for the inter SH2 domain (iSH2) of the ⁇ 85 sub ⁇ nit and for the full-length p110 ⁇ subunit were generated and fused by overlapping PCR.
- the iSH2 PCR product was generated by using as a template the ORF318 (see above) and the primers gwG130-p03 (5'- GGGACAAG-
- the p85-iSH2/ p110 ⁇ fusion protein was assembled in a third PCR reaction by the overlapping linkers at the 3'end of the iSH2 fragment and the 5'end of the p110 ⁇ fragment, using the above mentioned gwG130-p03 primer and a primer containing an overlapping Histidine tag and the Gateway (Invitrogen) AttB2 recombination sequences (5'-GGG- ACCACTTTGTACAAGAAAGCTGGGTTTAA-
- PI3K ⁇ , Pf3K ⁇ and PI3K ⁇ were purified in two chromatographic steps: immobilized metal affinity chromatography (IMAC) on a Ni sepharose resin (GE Heaithcare) and gel filtration utilizing a Superdex 200 26/60 column (GE Healthcare).
- IMAC immobilized metal affinity chromatography
- GE Heaithcare Ni sepharose resin
- AK buffers were chilled to 4°C and lysis was performed chilled on ice. Column fractionation was performed at room temperature. All buffers used to purify PI3K ⁇ contained 0.05% Triton X100 in addition to what is described below.
- frozen cells from 10 L of Tn5 ceil culture were resuspended in "Lysis Buffer" 20 mM Tris-CI, pH 7.5, 500 mM NaCI, 5% glycerol, 5 mM imidazole, 1 mM NaF.
- okadaic acid 5 mM BME, 1 x Complete protease inhibitor cocktail - EDTA-free (20 tablets/1 L buffer, Roche Applied Sciences), benzonase (25U/mL buffer, EMD Biosciences) at a ratio of 1 :6 v/v pellet to Lysis Buffer ratio, and mechanically fysed by douncing 20 strokes using a tight-fitting pestle.
- the lysate was centrifuged at 45,000 g for 30 minutes, and the supernatant was loaded onto a pre-equilibrated IMAC column (3 mL resin/100 rr.L lysate).
- the column was washed with 3-5 column volumes of Lysis Buffer, followed by a second wash of 3-5 column volumes with 20 mM Tris-Ci, pH 7.5, 500 mM NaCI, 5% glycerol, 45 mM imidazole, 1 mM NaF 1 0.1 ⁇ g/mL OAA S 5 mM BME, 1x Complete protease inhibitor cocktail - EDTA-free.
- Protein was eluted with 20 mM Tris-CI, pH 7.5, 0.5 M NaCI, 5% glycerol, 25G mM imidazole, 1 mM NaF, 0.1 ⁇ g/mL OAA, 5 mM BME 1 1x Complete protease inhibitor cocktail - EDTA-free. Pertinent fractions were analyzed by SDS-PAGE and pooled accordingly. The protein was further purified by gel filtration on a Superdex 200 26/60 column equilibrated in 20 mM Tris-CI, pH 7.5, 0.5 M NaCl, 5% glycerol, 1 mM NaF, 5 mM DTT, 1x Complete protease inhibitor cocktail - EDTA-free.
- Pertinent fractions were analyzed by SDS-PAGE and pooled accordingly.
- An equal volume of Dialysis Buffer (20 mM Tris-CI, pH 7.5, 500 mM NaCI, 50% glycerol, 5 mM NaF, 5 mM DTT) was added to the pool and than dralyzed against Dialysis Buffer two changes (one change overnight). Protein was stored at - 2O 0 C.
- PI3K5 was purified in three chromatographic steps: immobilized metal affinity chromatography on a Ni Sepharose resin (GE Healthcare), gel filtration utilizing a Superdex 200 26/60 column (GE Healthcare), and finally a ion exchange step on a Q-HP column (GE Heaithcare). Af! buffers were chilled to 4 0 C and lysis was performed chilled on ice. Column fractionation was performed at room temperature.
- the lysate was cent ⁇ fuged at 45,000 g for 30 minutes, and the supernatant was loaded onto a pre-equlitbrated IMAC column (5 rriL resin/100 mL lysate).
- the column was washed with 3-5 column volumes of Lysis Buffer, followed by a second wash of 3-5 column voiumes with 20 rnM Tris-CI, pH 7.5, 500 mM NaCi, 5% glycerol, 40 mM imidazole, 1 mM NaF, 0.1ug/mL OAA, 5 mM BME, 1 x Complete protease inhibitor cocktail - EDTA-free.
- Protein was eluted with 20 mM Tris-CI, pH 7.5, 500 mM NaCI 1 5% glycerol. 250 mM imidazole, 1 mM NaF 1 0.1 ⁇ g/mL OAA, 5 mM BME, 1 x Complete protease inhibitor cocktail - EDTA-free. Pertinent fractions were analyzed by SDS-PAGE and pooled accordingly.
- the protein was further purified by gel filtration on a S ⁇ perdex 200 equilibrated in 20 mM Tris-CI, pH 7.5, 500 mM NaCl, 5% glycerol, 1 mM NaF, O.tug/mL OAA, 5 mM DTT, 1 x Complete protease inhibitor cocktail - EDTA-free. Pertinent fractions were analyzed by SDS-PAGE and pooled accordingly.
- the protein elutes at ⁇ 200 mM NaCl. Pertinent fractions were analyzed by SDS-PAGE and pooled accordingly. An equal volume of Dialysis Buffer (20 mM Tris-CI, pH 7.5, 500 mM NaCl, 50% glycerol, 1 mM NaF. 0.1 ⁇ g/mL OAA, 5 mM DTT) was added to the pool and then dialyzed against Dialysis Buffer two changes (one change overnight). Protein was stored at -2O 0 C. The following results were obtained using the above described assays.
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MX2020004398A (en) * | 2014-04-08 | 2022-06-06 | Incyte Corp | Treatment of b-cell malignancies by a combination jak and pi3k inhibitor. |
KR20170084558A (en) * | 2016-01-12 | 2017-07-20 | 삼성전자주식회사 | Electronic Device and Operating Method Thereof |
CN106946669B (en) * | 2017-03-21 | 2020-09-15 | 国家电网公司 | Environment-friendly insulating gas co-production process and industrial production device |
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DE102004048877A1 (en) | 2004-10-07 | 2006-04-13 | Boehringer Ingelheim Pharma Gmbh & Co. Kg | New tricyclic thiazole derivatives useful as PI3 kinase inhibitors, for treating e.g. inflammatory and allergic airway and skin diseases, autoimmune and kidney disease |
UY29149A1 (en) | 2004-10-07 | 2006-05-31 | Boehringer Ingelheim Int | TIAZOLIL-DIHIDRO-INDAZOLES |
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JP2012531456A (en) * | 2009-07-02 | 2012-12-10 | ノバルティス アーゲー | Substituted 2-carboxamide cycloaminoureas |
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