WO2010098862A3 - Method of using an oligonucleotide microarray to detect cancer from serum nucleic acid - Google Patents
Method of using an oligonucleotide microarray to detect cancer from serum nucleic acid Download PDFInfo
- Publication number
- WO2010098862A3 WO2010098862A3 PCT/US2010/000569 US2010000569W WO2010098862A3 WO 2010098862 A3 WO2010098862 A3 WO 2010098862A3 US 2010000569 W US2010000569 W US 2010000569W WO 2010098862 A3 WO2010098862 A3 WO 2010098862A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- probes
- nucleic acid
- detect cancer
- oligonucleotide
- microarray
- Prior art date
Links
Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/178—Oligonucleotides characterized by their use miRNA, siRNA or ncRNA
Abstract
Disclosed herein is a method of using an oligonucleotide microarray to detect cancer from serum micro RNA. The method provides a microarray of oligonucleotide probes. A serum miRNA sample is hybridized to the microarray of oligonucleotide probes. The oligonucleotide probes comprise complementary probes to the miRNAs in the serum miRNA sample and mismatch probes having mismatches from the complementary probes as well as control spike in probes.
Applications Claiming Priority (8)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US20855509P | 2009-02-24 | 2009-02-24 | |
US61/208,555 | 2009-02-24 | ||
US21610509P | 2009-05-12 | 2009-05-12 | |
US61/216,105 | 2009-05-12 | ||
US21637609P | 2009-05-14 | 2009-05-14 | |
US61/216,376 | 2009-05-14 | ||
US21718409P | 2009-05-27 | 2009-05-27 | |
US61/217,184 | 2009-05-27 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2010098862A2 WO2010098862A2 (en) | 2010-09-02 |
WO2010098862A3 true WO2010098862A3 (en) | 2012-07-19 |
Family
ID=42666124
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/US2010/000569 WO2010098862A2 (en) | 2009-02-24 | 2010-02-24 | Method of using an oligonucleotide microarray to detect cancer from serum nucleic acid |
Country Status (1)
Country | Link |
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WO (1) | WO2010098862A2 (en) |
Families Citing this family (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2012040500A2 (en) * | 2010-09-22 | 2012-03-29 | Hoon Dave S B | Direct blood assay for detection of circulating microrna in cancer patients |
EP2734642A1 (en) * | 2011-07-22 | 2014-05-28 | SCHMIEGEL, Wolff | Snrna rnu2-1 as a tumor marker |
US8846316B2 (en) | 2012-04-30 | 2014-09-30 | Industrial Technology Research Institute | Biomarker for human liver cancer |
Citations (10)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2003016475A2 (en) * | 2001-08-14 | 2003-02-27 | The General Hospital Corporation | Nucleic acid and amino acid sequences involved in pain |
US20040181048A1 (en) * | 2000-10-24 | 2004-09-16 | Wang David G | Identification and mapping of single nucleotide polymorphisms in the human genome |
US20060160121A1 (en) * | 2004-10-05 | 2006-07-20 | Wyeth | Probe arrays for detecting multiple strains of different species |
US20070039076A1 (en) * | 1999-07-20 | 2007-02-15 | Boukharov Andrey A | Plant genome sequence and uses thereof |
US20070054278A1 (en) * | 2003-11-18 | 2007-03-08 | Applera Corporation | Polymorphisms in nucleic acid molecules encoding human enzyme proteins, methods of detection and uses thereof |
US20070067865A1 (en) * | 2000-09-05 | 2007-03-22 | Kovalic David K | Annotated plant genes |
US20070083945A1 (en) * | 2000-03-10 | 2007-04-12 | Byrum Joseph R | Nucleic acid molecules and other molecules associated with plants |
US20070083334A1 (en) * | 2001-09-14 | 2007-04-12 | Compugen Ltd. | Methods and systems for annotating biomolecular sequences |
US20070161004A1 (en) * | 2004-05-28 | 2007-07-12 | David Brown | Methods and compositions involving microRNA |
US20080263730A1 (en) * | 1999-05-07 | 2008-10-23 | Andersen Scott E | Nucleic acid molecules and other molecules associated with plants |
-
2010
- 2010-02-24 WO PCT/US2010/000569 patent/WO2010098862A2/en active Application Filing
Patent Citations (10)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20080263730A1 (en) * | 1999-05-07 | 2008-10-23 | Andersen Scott E | Nucleic acid molecules and other molecules associated with plants |
US20070039076A1 (en) * | 1999-07-20 | 2007-02-15 | Boukharov Andrey A | Plant genome sequence and uses thereof |
US20070083945A1 (en) * | 2000-03-10 | 2007-04-12 | Byrum Joseph R | Nucleic acid molecules and other molecules associated with plants |
US20070067865A1 (en) * | 2000-09-05 | 2007-03-22 | Kovalic David K | Annotated plant genes |
US20040181048A1 (en) * | 2000-10-24 | 2004-09-16 | Wang David G | Identification and mapping of single nucleotide polymorphisms in the human genome |
WO2003016475A2 (en) * | 2001-08-14 | 2003-02-27 | The General Hospital Corporation | Nucleic acid and amino acid sequences involved in pain |
US20070083334A1 (en) * | 2001-09-14 | 2007-04-12 | Compugen Ltd. | Methods and systems for annotating biomolecular sequences |
US20070054278A1 (en) * | 2003-11-18 | 2007-03-08 | Applera Corporation | Polymorphisms in nucleic acid molecules encoding human enzyme proteins, methods of detection and uses thereof |
US20070161004A1 (en) * | 2004-05-28 | 2007-07-12 | David Brown | Methods and compositions involving microRNA |
US20060160121A1 (en) * | 2004-10-05 | 2006-07-20 | Wyeth | Probe arrays for detecting multiple strains of different species |
Also Published As
Publication number | Publication date |
---|---|
WO2010098862A2 (en) | 2010-09-02 |
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