WO2010025541A1 - Identification of a conserved inner core oligosaccharide region of moraxella catarrhalis lipopolysaccharide as a vaccine antigen - Google Patents

Identification of a conserved inner core oligosaccharide region of moraxella catarrhalis lipopolysaccharide as a vaccine antigen Download PDF

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WO2010025541A1
WO2010025541A1 PCT/CA2009/001193 CA2009001193W WO2010025541A1 WO 2010025541 A1 WO2010025541 A1 WO 2010025541A1 CA 2009001193 W CA2009001193 W CA 2009001193W WO 2010025541 A1 WO2010025541 A1 WO 2010025541A1
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glc
moraxella catarrhalis
gic
moiety
deoxy
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PCT/CA2009/001193
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French (fr)
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Andrew D. Cox
James C . Richards
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National Research Council Of Canada
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Priority to CA2732338A priority Critical patent/CA2732338C/en
Priority to US13/056,165 priority patent/US8697092B2/en
Priority to EP09810947.3A priority patent/EP2334706B1/en
Publication of WO2010025541A1 publication Critical patent/WO2010025541A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies
    • C07K16/12Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from bacteria
    • C07K16/1203Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from bacteria from Gram-negative bacteria
    • C07K16/1214Immunoglobulins [IGs], e.g. monoclonal or polyclonal antibodies against material from bacteria from Gram-negative bacteria from Pseudomonadaceae (F)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/02Bacterial antigens
    • A61K39/104Pseudomonadales, e.g. Pseudomonas
    • A61K39/1045Moraxella
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P37/00Drugs for immunological or allergic disorders
    • A61P37/02Immunomodulators
    • A61P37/04Immunostimulants
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K2039/505Medicinal preparations containing antigens or antibodies comprising antibodies
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K2039/60Medicinal preparations containing antigens or antibodies characteristics by the carrier linked to the antigen
    • A61K2039/6087Polysaccharides; Lipopolysaccharides [LPS]

Definitions

  • Moraxella catarrhaHs can cause otitis media which is of significant public health and economic concern in humans.
  • Vaccine strategies are being pursued to combat these infections. These strategies are based on the identification of conserved, immunogenic cell surface components; however, the detection of conserved molecules that would confer protection against the vast majority of strains from a single species has proven problematic.
  • the outer leaflet of the outer membrane of all Gram-negative bacteria contains an amphiphillic carbohydrate molecule termed lipopoiysaccharide (LPS).
  • LPS lipopoiysaccharide
  • O-antigenic polymeric repeating unit can be present or absent beyond the core oligosaccharide of the LPS molecule and is absent in al! strains of Moraxella catarrhaHs so far examined.
  • the core oligosaccharide can be arbitrarily divided into an outer and inner core and is connected to the lipid A region via one or more ketose sugar(s), 2-keto- 3-deoxy-octulosonic acid (Kdo).
  • Kdo 2-keto- 3-deoxy-octulosonic acid
  • the lipid A region is responsible for the endotoxic activity of the Gram-negative bacterium and consists in most species of a disaccharide of glucosamine sugars that are phosphorylated and contain both ester and amide linked fatty acids.
  • the outer core region can be somewhat variable within a species and is therefore not a good vaccine candidate. However what is arbitrarily termed the inner core oligosaccharide has been found to be conserved within several species, and is the vaccine antigen of choice in this application.
  • the endotoxicity of the lipid A region is due to the fatty acid residues. Removal of the ester-linked fatty acids leaves an O-deacylated LPS species that is no longer endotoxic. Removal of all fatty acids i.e.
  • both the amide and ester-linked fatty acids can be performed chemically, but involves harsh conditions which can sometimes affect other regions of the LPS molecule if residues susceptible to these conditions are elaborated by the bacterial species LPS of interest Therefore if a conserved residue is removed by the conditions employed to prepare the vaccine antigen, it is likely that the resulting immune response to that antigen would not be broadly cross reactive or protective.
  • amidases from Dictyostelium discoideum to remove the N-linked fatty acids and thus avoid the use of harsh chemical conditions (and the possible removal of sensitive residues).
  • LPS based vaccines generally require the removal of sufficient fatty acids from the lipid A region of the molecule to preclude endotoxicity and to derive a molecule that is amenable to conjugation strategies.
  • a reagent for inducing an immune response comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of: ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • a vaccine capable of eliciting an immune response against at least one bacterial strain of the species Moraxella catarrhalis comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of; ⁇ -Glc-(1-2)- ⁇ -Glc
  • OS purified or isolated inner core oligosaccharide
  • a method of preparing a medicament for the treatment or prevention of a disease caused by Moraxella catarrhalis infection comprising mixing a purified or isolated inner core oligosaccharide (OS) having the general formula of: ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • R is hydrogen or 2-acetamido-2-deoxy-D- ⁇ -g!ucopyranose (GIcNAc)
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -g!ucopyranose
  • 'Kdo' is 2-keto-3- deoxy-octulosonic acid
  • 'G!c' is glucose with a suitable immunogenic presenting agent.
  • a method of treating a disease caused by Moraxella catarrhalis infection comprising administering to an individual in need of such treatment a purified or isolated inner core oligosaccharide (OS) having the general formula of: ⁇ -G!c-(1-2)- ⁇ -Glc
  • GIcNAc 2-acetamido ⁇ 2-deoxy-D- ⁇ -glucopyranose
  • 'Kdo' is 2-keto-3- deoxy-octuloso ⁇ ic acid
  • 'GIc' is giucose and a suitable immunogenic presenting agent.
  • a purified or isolated inner core oligosaccharide having the general formula of: ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • an isolated lipopolysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety free of variable outer core oligosaccharide extensions.
  • an isolated lipopolysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety having the structure I
  • a pharmaceutical composition for eliciting functional antibodies comprising the isolated lipopoiysaccharide moiety described above.
  • a method for the production and harvesting of a functional cross-reactive antibody against Moraxella catarrhalis which comprises: (a) generating antibodies to the lipopolysaccharide moiety described above; (b) testing said antibodies against a plurality of Moraxella catarrhalis strains; and (c) selecting those antibodies which are cross-reactive.
  • composition described above for the preparation of a medicament for treating a disease caused by infection with Moraxella catarrhalis.
  • a giycoconjugate comprising: a lipopolysaccharide moiety consisting essentially of a penta-glucosyl inner-core moiety having the structure !
  • R is hydrogen or 2-acetamido-2-deoxy-D- ⁇ -glucopyranose (GIcNAc) 1 'Kdo' is 2- keto-3-deoxy-octuiosonic acid and 1 GIc' is glucose and an immunogenic carrier.
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -glucopyranose
  • Fig. 1 Structures of the LPS from the 3 serotypes of Moraxella catarrhalis
  • Fig. 2 Structure of the LPS from the Igt2 mutant of serotype A strain of Moraxella catarrhalis
  • Fig. 3 FACS analysis of binding of antibodies as indicated to whole cells of Moraxella catarrhalis or Neisseria meningitidis as indicated.
  • Fig. 4 LPS ELISA analysis of cross-reactivity of mAb MC2-1 against Moraxella catarrhalis (M. cat), Salmonella typhim ⁇ rium (S. thy), Mannheimia haemolytica (Mh), Haemophilus influenzae (Hi) and Neisseria meningitidis (Nm.) at dilution as indicated Fig. 5.
  • Mc Moraxella catarrhalis
  • ct is complement
  • s is mAb MC 2-1.
  • FIG. 1 Titration curves of LPS ELISA with mAbs 2-2, -3, -4, -5, -7, -9, -10 and -11 against LPS from wt strains serotypes A, B and C and the Igt2 mutant of serotype A.
  • Fig. 7 Titration curves of LPS ELISA with mAbs 2-10 and -15 against LPS from wt strains serotypes A and C and the Igt2 mutant of serotype A.
  • Fig. 8 Titration curves of whole cell ELISA with mAbs 2-10 and -15 against whole cells from wt strains serotypes A, B and C and the Igt2 mutant of serotype A.
  • antigenic structures useful in producing vaccines against and compounds helpful in combating diseases caused by the bacterium Moraxella catarrhalis.
  • specific structures of the carbohydrate molecules derived from genetically engineered strains of Moraxella catarrhalis which when presented appropriately to the immune system will facilitate a functional immune response to the target core oligosaccharide region.
  • the invention is directed to a purified or isolated core oligosaccharide structure selected from the group consisting of:
  • such core oligosaccharide structures have many utilities in the art.
  • such structures may be used in the preparation of a vaccine for immunizing individuals in need of such treatment against disease(s) caused by Moraxella catarrhalis.
  • bacterial cells comprising a core oligosaccharide as described above may be treated by means known in the art, for example, heat-killing, or the core oligosaccharide may be purified and/or isolated by means known in the art and used for immunization purposes.
  • bacterial strains producing such core oligosaccharide structures are exemplified above.
  • a method of immunizing an individual against a Moraxella infection comprising administering to an individual in need of such treatment an effective amount of a core oligosaccharide as described above.
  • an immunization or vaccination or administration can also be considered a method of preventing a disease caused by Moraxella by administering to an individual in need of such treatment a core oligosaccharide as described above.
  • a reagent for inducing an immune response comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of: ⁇ -Glo-(1-2)- ⁇ -Glc 1
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -glucopyranose
  • 'Kdo 1 2-keto-3- deoxy-octuiosonic acid
  • 'GIc' glucose
  • the reagent is capable of eliciting functional antibodies against at least one of the strains within the species of Moraxella catarrhalis, preferably against a majority of the strains within the species Moraxella catarrhalis. More preferably, the reagent is capable of eliciting functional antibodies against at least 60%, at least 70%, at least 80%, at least 85%, at least 90% or at least 95% of the strains within the species Moraxella catarrhalis.
  • 'functional antibodies 1 refers to antibodies that for example recognize wild-type Moraxella catarrhalis LPS, Moraxella catarrhalis whole cells or have bactericidal activity against Moraxella catarrhalis, as discussed herein.
  • the reagent further comprises an immunogenic presenting agent.
  • an immunogenic presenting agent refers to any agent which increases or improves the immunogenicity of the reagent and may be for example but by no means limited to an adjuvant, a carrier protein, liposomes or the like.
  • 'immunogenic carrier' has the commonly used meaning in the art, that is, refers to a carrier protein or the like.
  • the inner core oligosaccharide is attached to lipid A.
  • the inner core oligosaccharide is substantially free of outer core oligosaccharide.
  • the reagent may be used as a vaccine or in the preparation of a vaccine, as described herein.
  • the reagent may be used in a method for preparing a medicament, for the treatment or prevention of a disease caused by Moraxella catarrhalis infection comprising mixing a purified or isolated inner core oligosaccharide (OS) having the general formula of: ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • OS purified or isolated inner core oligosaccharide
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -glucopyranose
  • 'Kdo' is 2-keto-3- deoxy-octulosonic acid
  • 'GIc' is glucose with a suitable immunogenic presenting agent.
  • the medicament may be a vaccine.
  • the vaccine may be a conjugated vaccine.
  • the reagent or a vaccine prepared therefrom may be administered to an individual in need of such treatment, for example an individual suffering from, suspected of suffering from, or at risk of developing a Moraxella catarrhalis infection.
  • the reagent may be administered to an individual known to be infected with or suspected of being infected with Moraxetla catarrhalis as a means of stimulating an immune response.
  • individuals at risk of developing a Moraxella catarrhalis infection or desirous of preventing a Moraxella catarrhalis infection may be protected against such infection by administering the reagent as described above or a vaccine prepared therefrom.
  • a method of treating a disease caused by Moraxe ⁇ a catarrhalis infection comprising administering to an individual in need of such treatment a purified or isolated inner core oligosaccharide (OS) having the general formula of:
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -glucopyranose
  • 'Kdo' is 2-keto-3- deoxy-octulosonic acid
  • 'GIc' is glucose and a suitable immunogenic presenting agent.
  • a purified or isolated inner core oligosaccharide having the general formula of; ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • the purified or isolated inner core oligosaccharide may be derived from the inner core of Moraxella catarrhalis or a synthetic version thereof or a functional equivalent thereof.
  • the inner core oligosaccharide or a portion thereof is an epitope as discussed herein and may be used as the immunogenic component in a vaccine or medicament as discussed herein.
  • antibodies reactive with the epitope, immunogenic component or reagent described above are provided.
  • a method for the identification of immunogenic epitopes of strains of a species of Moraxella catarrhalis comprising inoculating a suitable host organism with Igt2/lgt4 mutant strain of Moraxella catarrhalis and testing such antibodies against a wild type Moraxella catarrhalis strain to identify those antibodies which are reactive, and for which the epitopes are therefore accessible in the wild-type organism.
  • the invention also provides an isolated lipopoiysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety free of variable outer core oligosaccharide extensions.
  • the isolated lipopoiysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety having the structure I
  • GIcNAc 2-acetamido-2-deoxy-D ⁇ -glucopyranose
  • 'Kdo' 2- keto-3-deoxy-octulosonic acid
  • 'GIc' glucose
  • glycoconjugate comprising: a lipopoiysaccharide moiety consisting essentially of a penta-glucosyl inner-core moiety having the structure I ⁇ -Glc-(1-2)- ⁇ -Glc 1
  • R is hydrogen or 2-acetamido-2-deoxy-D- ⁇ -glucopyranose (GIcNAc)
  • GIcNAc 2-acetamido-2-deoxy-D- ⁇ -glucopyranose
  • 'Kdo' is 2- keto-3-deoxy-octulosonJc acid
  • 'GIc' is glucose and an immunogenic carrier.
  • the lipopolysaccharide moiety and the immunogenic carrier may be cross- linked with a linker molecule.
  • suitable linker molecules for such purposes are well known and may be selected by routine experimentation.
  • Example 1 LP8 Structures of Moraxella catarrhalis.
  • Moraxella catarrhalis can be classified into 3 serotypes (A, B, C) based upon LPS structure, shown in Fig. 1.
  • /Wc LPS structure is rather unique amongst Gram-negative bacteria as it does not contain any heptose residues, but instead has glucose residues attached to the Kdo sugar, and indeed the initial glucose residue is tri-substituted.
  • Igt2 glycosyltransferase they termed Igt2 in a serotype A strain, resulting in a truncated structure, which we postulated may be a sufficiently conserved inner structure to afford protection against all three serotypes (Fig. 2).
  • the subsequent examples detail our production of the Igt2 mutant in which the conserved structure is elaborated. We will then give details of the production of monoclonal antibodies to this conserved structure and illustrate their cross-reactivity and ability to protect. Finally we will detail a structure which lacks the terminal N-acety!
  • the Igt2 mutant was created by the insertion of an antibiotic-resistance cassette in the Igt2 gene and core oligosaccharide from the Igt2 mutant was examined by NMR, with the assignment consistent with the predicted Igt2 core OS structure (Table 1).
  • Example 3 mAb production and cross-reactivity mAb MC2-1 was generated to Mc Igt2 killed whole cells and selected by screening with Igt2 and wt LPS. The specificity of mAb MC2-1 was examined by FACS and was found to recognise Mc cells specifically and did not cross-react with meningococcal ceils, thus illustrating the specificity of the mAb, so that the possibility of unwanted non-specific cross- reactivity can be ruled out (Fig. 3).
  • MC2-1 Moraxella strains Igt1 and MC361/3m that elaborate LPS molecules that are more truncated than the Igt2 mutant, and these are not recognised by MC2-1.
  • MC2-1 specificity is also shown as other bacterial species (Salmonella typhimuri ⁇ m, Mannheimia haemolytica, Haemophilus influenzae and Neisseria meningitidis) are not recognised. This once again illustrates the specificity of the mAb, so that the possibility of unwanted non-specific cross-reactivity can be ruled out, such that we know we are effectively targeting Moraxella cells.
  • MAb MC 2-1 was bactericidal against wild type serotype A. (Fig. 5).
  • Example 5 New mAb production A second series of mAbs were raised to this Igt2 structure by the same standard methodology as used in Example 3. Cross-reactivity screening of the candidate mAbs obtained revealed a strong immunodominance of the terminal GIcNAc residue of the core OS (Fig. 6). Ascites fluid was raised to mAbs MC2-10 and -15 and the ascites fluid was titrated against LPS from the Igt2 mutant and serotypes A and C (Fig. 7).
  • the ascitic fluid was subsequently tested for their ability to recognise whole celts of Moraxella catarrhalis (Fig. 8), and was then tested in a bactericidal assay which revealed killing of the homologous strain and of the wild-type strain (Table 2).

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Abstract

There are disclosed herein antigenic structures useful in producing vaccines against and compounds helpful in combating diseases caused by the bacterium Moraxella catarrhalis. Disclosed are specific structures of the carbohydrate molecules derived from genetically engineered strains of Moraxella catarrhalis, which when presented appropriately to the immune system will facilitate a functional immune response to the target core oligosaccharide region.

Description

Identification of a conserved inner core oligosaccharide region of Moraxella catarrhaHs lipopolysaccharide as a vaccine antigen
PRIQR APPLiCATION INFORMATION
This application claims the benefit of US Provisional Patent Application 61/094,098, filed September 4, 2008.
BACKGROUND OF THE INVENTION
Moraxella catarrhaHs can cause otitis media which is of significant public health and economic concern in humans. Vaccine strategies are being pursued to combat these infections. These strategies are based on the identification of conserved, immunogenic cell surface components; however, the detection of conserved molecules that would confer protection against the vast majority of strains from a single species has proven problematic.
The outer leaflet of the outer membrane of all Gram-negative bacteria contains an amphiphillic carbohydrate molecule termed lipopoiysaccharide (LPS).
An O-antigenic polymeric repeating unit (O-antigen) can be present or absent beyond the core oligosaccharide of the LPS molecule and is absent in al! strains of Moraxella catarrhaHs so far examined. The core oligosaccharide can be arbitrarily divided into an outer and inner core and is connected to the lipid A region via one or more ketose sugar(s), 2-keto- 3-deoxy-octulosonic acid (Kdo). The lipid A region is responsible for the endotoxic activity of the Gram-negative bacterium and consists in most species of a disaccharide of glucosamine sugars that are phosphorylated and contain both ester and amide linked fatty acids. The outer core region can be somewhat variable within a species and is therefore not a good vaccine candidate. However what is arbitrarily termed the inner core oligosaccharide has been found to be conserved within several species, and is the vaccine antigen of choice in this application. The endotoxicity of the lipid A region is due to the fatty acid residues. Removal of the ester-linked fatty acids leaves an O-deacylated LPS species that is no longer endotoxic. Removal of all fatty acids i.e. both the amide and ester-linked fatty acids can be performed chemically, but involves harsh conditions which can sometimes affect other regions of the LPS molecule if residues susceptible to these conditions are elaborated by the bacterial species LPS of interest Therefore if a conserved residue is removed by the conditions employed to prepare the vaccine antigen, it is likely that the resulting immune response to that antigen would not be broadly cross reactive or protective. We have previously detailed the utilisation of amidases from Dictyostelium discoideum to remove the N-linked fatty acids and thus avoid the use of harsh chemical conditions (and the possible removal of sensitive residues).
LPS based vaccines generally require the removal of sufficient fatty acids from the lipid A region of the molecule to preclude endotoxicity and to derive a molecule that is amenable to conjugation strategies.
Current strategies used in the art to prepare LPS-based glycoconjugate vaccines link the carbohydrate to a carrier protein either via the Kdo residues of O-deacylated LPS or of core oligosaccharides or via the derived lipid A region of the molecule. We have shown previously that conjugation via the Kdo residues does not optimally present the target core oligosaccharide region to the host's immune system and the resulting sera are not functional.
SUMMARY OF THE INVENTION
According to a first aspect of the invention, there is provided a reagent for inducing an immune response comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-Glc-(1-2)-β-Glc 1
I
6
R-(1-2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octuiosonic acid and 'GIc' is glucose.
According to a second aspect of the invention, there is provided a vaccine capable of eliciting an immune response against at least one bacterial strain of the species Moraxella catarrhalis comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of; α-Glc-(1-2)-β-Glc
] 6
R-(1-2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdθ
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosonic acid and 'Gic1 is glucose.
According to a third aspect of the invention, there is provided a method of preparing a medicament for the treatment or prevention of a disease caused by Moraxella catarrhalis infection comprising mixing a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-Glc-(1-2)-β-Glc 1
6 I
R-(1~2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-G!c where R is hydrogen or 2-acetamido-2-deoxy-D-α-g!ucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosonic acid and 'G!c' is glucose with a suitable immunogenic presenting agent.
According to a fourth aspect of the invention, there is provided a method of treating a disease caused by Moraxella catarrhalis infection comprising administering to an individual in need of such treatment a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-G!c-(1-2)-β-Glc
6 R-{1-2)-β-Glc-(1-4)-α-G!c-(1-5)-α-Kdo
1 β-GIc where R is hydrogen or 2-acetamido~2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosoπic acid and 'GIc' is giucose and a suitable immunogenic presenting agent.
According to a fifth aspect of the invention, there is provided a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-Glc-(1-2)-β-Glc 1
1
6
R-(1-2)-β-Glc-(1 -4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2~acetamido-2-deoxy-D-α-glucopyranose (GIcNAc)1 'Kdo' is 2-keto-3- deoxy-octuiosonic acid and 'GIc' is glucose.
According to a further aspect of the invention, there is provided an isolated lipopolysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety free of variable outer core oligosaccharide extensions.
According to a further aspect of the invention, there is provided an isolated lipopolysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety having the structure I
α-Glc-(1-2)-β-Glc 1
!
6
R-(1-2)-β-Glc-(1 -4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo! is 2- keto-3-deoxy-octulosonic acid and 'GIc' is glucose.
According to another aspect of the invention, there is provided a pharmaceutical composition for eliciting functional antibodies comprising the isolated lipopoiysaccharide moiety described above. According to a further aspect of the invention, there is provided a method for the production and harvesting of a functional cross-reactive antibody against Moraxella catarrhalis which comprises: (a) generating antibodies to the lipopolysaccharide moiety described above; (b) testing said antibodies against a plurality of Moraxella catarrhalis strains; and (c) selecting those antibodies which are cross-reactive.
According to another aspect of the invention, there is provided the use of the composition described above for the preparation of a medicament for treating a disease caused by infection with Moraxella catarrhalis.
According to another aspect of the invention, there is provided a giycoconjugate comprising:a lipopolysaccharide moiety consisting essentially of a penta-glucosyl inner-core moiety having the structure !
α-Glc-(1-2)-β-Glc 1
R-(1 ~2)-β-Gfc-(1 -4)-α-Glc-(1 -5)-α-Kdθ
3
1 β-GIc
where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc)1 'Kdo' is 2- keto-3-deoxy-octuiosonic acid and 1GIc' is glucose and an immunogenic carrier.
BRIEF DESCRIPTION OF THE DRAWINGS
Fig. 1 Structures of the LPS from the 3 serotypes of Moraxella catarrhalis Fig. 2 Structure of the LPS from the Igt2 mutant of serotype A strain of Moraxella catarrhalis
Fig. 3. FACS analysis of binding of antibodies as indicated to whole cells of Moraxella catarrhalis or Neisseria meningitidis as indicated.
Fig. 4. LPS ELISA analysis of cross-reactivity of mAb MC2-1 against Moraxella catarrhalis (M. cat), Salmonella typhimυrium (S. thy), Mannheimia haemolytica (Mh), Haemophilus influenzae (Hi) and Neisseria meningitidis (Nm.) at dilution as indicated Fig. 5. Graph of colony counts of Moraxella catarrhalis following bactericidal assay. Mc is Moraxella catarrhalis; ct is complement; s is mAb MC 2-1.
.Fig 6. Titration curves of LPS ELISA with mAbs 2-2, -3, -4, -5, -7, -9, -10 and -11 against LPS from wt strains serotypes A, B and C and the Igt2 mutant of serotype A. Fig. 7. Titration curves of LPS ELISA with mAbs 2-10 and -15 against LPS from wt strains serotypes A and C and the Igt2 mutant of serotype A.
Fig. 8. Titration curves of whole cell ELISA with mAbs 2-10 and -15 against whole cells from wt strains serotypes A, B and C and the Igt2 mutant of serotype A.
Fig. 9 Structure of the LPS from the Igt2 / Igt4 double mutant of serotype A strain of Moraxella catarrhalis
DESCRIPTION OF THE PREFERRED EMBODIMENTS
Unless defined otherwise, ail technical and scientific terms used herein have the same meaning as commonly understood by one of ordinary skill in the art to which the invention belongs. Although any methods and materials similar or equivalent to those described herein can be used in the practice or testing of the present invention, the preferred methods and materials are now described. All publications mentioned hereunder are incorporated herein by reference.
There are disclosed herein antigenic structures useful in producing vaccines against and compounds helpful in combating diseases caused by the bacterium Moraxella catarrhalis. Disclosed are specific structures of the carbohydrate molecules derived from genetically engineered strains of Moraxella catarrhalis, which when presented appropriately to the immune system will facilitate a functional immune response to the target core oligosaccharide region.
In one aspect, the invention is directed to a purified or isolated core oligosaccharide structure selected from the group consisting of:
α-Glc-(1-2)-β-Glc
1
6
R-(1 -2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is H or α-GlcNAc (2-acetamido-2-deoxy-D-α-glucopyranose), "Kdo* is 2-keto-3- deoxy-octulosonic acid and 'GIc' is glucose.
As will be appreciated by one of skill in the art and as discussed above, such core oligosaccharide structures have many utilities in the art. For example, as discussed above, such structures may be used in the preparation of a vaccine for immunizing individuals in need of such treatment against disease(s) caused by Moraxella catarrhalis.
For example, in some embodiments, bacterial cells comprising a core oligosaccharide as described above may be treated by means known in the art, for example, heat-killing, or the core oligosaccharide may be purified and/or isolated by means known in the art and used for immunization purposes. As discussed above, bacterial strains producing such core oligosaccharide structures are exemplified above.
In another embodiment of the invention, there is provided a method of immunizing an individual against a Moraxella infection comprising administering to an individual in need of such treatment an effective amount of a core oligosaccharide as described above. As will be appreciated by one of skill in the art, such an immunization or vaccination or administration can also be considered a method of preventing a disease caused by Moraxella by administering to an individual in need of such treatment a core oligosaccharide as described above.
A reagent for inducing an immune response comprising a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-Glo-(1-2)-β-Glc 1
6
R-(1 -2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo1 is 2-keto-3- deoxy-octuiosonic acid and 'GIc' is glucose.
In a preferred embodiment, as discussed herein, the reagent is capable of eliciting functional antibodies against at least one of the strains within the species of Moraxella catarrhalis, preferably against a majority of the strains within the species Moraxella catarrhalis.. More preferably, the reagent is capable of eliciting functional antibodies against at least 60%, at least 70%, at least 80%, at least 85%, at least 90% or at least 95% of the strains within the species Moraxella catarrhalis.
As used herein, 'functional antibodies1 refers to antibodies that for example recognize wild-type Moraxella catarrhalis LPS, Moraxella catarrhalis whole cells or have bactericidal activity against Moraxella catarrhalis, as discussed herein.
In some embodiments, the reagent further comprises an immunogenic presenting agent. As will be understood by one of skill in the art, 'an immunogenic presenting agent' refers to any agent which increases or improves the immunogenicity of the reagent and may be for example but by no means limited to an adjuvant, a carrier protein, liposomes or the like. As used herein, 'immunogenic carrier' has the commonly used meaning in the art, that is, refers to a carrier protein or the like.
As discussed herein, in some embodiments, the inner core oligosaccharide is attached to lipid A.
As discussed herein, preferably, the inner core oligosaccharide is substantially free of outer core oligosaccharide.
As will be appreciated by one of skil! in the art, the reagent may be used as a vaccine or in the preparation of a vaccine, as described herein.
For example, the reagent may be used in a method for preparing a medicament, for the treatment or prevention of a disease caused by Moraxella catarrhalis infection comprising mixing a purified or isolated inner core oligosaccharide (OS) having the general formula of: α-Glc-(1-2)-β-Glc 1
6
R-(1-2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosonic acid and 'GIc' is glucose with a suitable immunogenic presenting agent.
As will be appreciated by one of skill in the art, the medicament may be a vaccine. The vaccine may be a conjugated vaccine.
As will be readily apparent to one of skill in the art, the reagent or a vaccine prepared therefrom may be administered to an individual in need of such treatment, for example an individual suffering from, suspected of suffering from, or at risk of developing a Moraxella catarrhalis infection. Thus, the reagent may be administered to an individual known to be infected with or suspected of being infected with Moraxetla catarrhalis as a means of stimulating an immune response. Alternatively, individuals at risk of developing a Moraxella catarrhalis infection or desirous of preventing a Moraxella catarrhalis infection may be protected against such infection by administering the reagent as described above or a vaccine prepared therefrom.
Accordingly, in another aspect of the invention, there is provided a method of treating a disease caused by Moraxeϋa catarrhalis infection comprising administering to an individual in need of such treatment a purified or isolated inner core oligosaccharide (OS) having the general formula of:
Figure imgf000010_0001
R-(1-2)-β-Glc-(1-4)-α-G!c-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosonic acid and 'GIc' is glucose and a suitable immunogenic presenting agent..
In a further aspect of the invention, there is provided a purified or isolated inner core oligosaccharide (OS) having the general formula of; α-Glc-(1-2)-β-Glc 1
6
R-{1-2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdθ
3
1 P-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-g!ucopyranose (GIcNAc), 'Kdo' is 2-keto-3- deoxy-octulosonic acid and 'GIc1 is glucose. As will be appreciated by one of skill in the art, the purified or isolated inner core oligosaccharide may be derived from the inner core of Moraxella catarrhalis or a synthetic version thereof or a functional equivalent thereof. As will be appreciated by one of skill in the art, the inner core oligosaccharide or a portion thereof is an epitope as discussed herein and may be used as the immunogenic component in a vaccine or medicament as discussed herein.
In a further aspect of the invention, there are provided antibodies reactive with the epitope, immunogenic component or reagent described above.
In a further aspect of the invention, there is provided a method for the identification of immunogenic epitopes of strains of a species of Moraxella catarrhalis comprising inoculating a suitable host organism with Igt2/lgt4 mutant strain of Moraxella catarrhalis and testing such antibodies against a wild type Moraxella catarrhalis strain to identify those antibodies which are reactive, and for which the epitopes are therefore accessible in the wild-type organism.
The invention also provides an isolated lipopoiysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety free of variable outer core oligosaccharide extensions.
Preferably, the isolated lipopoiysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety having the structure I
α-Glc-(1 -2)-β-Glc 1
6
R-{1-2)-β-Glo-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D~α-glucopyranose (GIcNAc), 'Kdo' is 2- keto-3-deoxy-octulosonic acid and 'GIc' is glucose. There is also provided a method for the production and harvesting of a functional cross-reactive antibody against Moraxella catarrhalis which comprises: (a) generating antibodies to the lipopoiysaccharide moiety described herein; (b) testing said antibodies against a plurality of Moraxella catarrhalis strains; and (c) selecting those antibodies which are cross-reactive. There is also provided a glycoconjugate comprising:a lipopoiysaccharide moiety consisting essentially of a penta-glucosyl inner-core moiety having the structure I α-Glc-(1-2)-β-Glc 1
6 I
R-(1-2)-β-Glc-{1-4)-α-Glc-{1-5)-α-Kdo
3
1 β-Gic where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2- keto-3-deoxy-octulosonJc acid and 'GIc' is glucose and an immunogenic carrier. In the glycoconjugate, the lipopolysaccharide moiety and the immunogenic carrier may be cross- linked with a linker molecule. As wit! be appreciated by one of skill in the art, suitable linker molecules for such purposes are well known and may be selected by routine experimentation.
The identification, production and utilisation of conserved inner core regions of Moraxella catarrhalis LPS as a vaccine antigen will be described in the following examples. However, the invention is not necessarily limited by the examples.
Example 1 LP8 Structures of Moraxella catarrhalis.
Moraxella catarrhalis (Mc) can be classified into 3 serotypes (A, B, C) based upon LPS structure, shown in Fig. 1.
/Wc LPS structure is rather unique amongst Gram-negative bacteria as it does not contain any heptose residues, but instead has glucose residues attached to the Kdo sugar, and indeed the initial glucose residue is tri-substituted.
Our ultimate goal was to produce an LPS-based vaccine against Mc and our initial goal was to identify inner core structures that would be conserved across the range of Moraxella strains and illustrate that these inner core epitopes were capable of eliciting an immune response which could recognise and facilitate killing of wild-type strains. Our rationale was to prepare a mutant strain of Mc that contained a conserved inner core structure, which did not elaborate the host like structures observed in the outer core LPS, that could lead to auto-immunity due to their mimicry of structures found on human cells. Peak et al FEBS J 2007 v274, p2024-37 had identified a glycosyltransferase they termed Igt2 in a serotype A strain, resulting in a truncated structure, which we postulated may be a sufficiently conserved inner structure to afford protection against all three serotypes (Fig. 2). The subsequent examples detail our production of the Igt2 mutant in which the conserved structure is elaborated. We will then give details of the production of monoclonal antibodies to this conserved structure and illustrate their cross-reactivity and ability to protect. Finally we will detail a structure which lacks the terminal N-acety! glucosamine residue, by virtue of preparing a Igt2 / Igt4 double mutant, that we believe will present the conserved inner core structure optimally. We therefore initially mutated the Igt2 gene in order to examine this truncated structure as a candidate vaccine antigen.
Example 2 Lgt2 mutant construction and characterisation
The Igt2 mutant was created by the insertion of an antibiotic-resistance cassette in the Igt2 gene and core oligosaccharide from the Igt2 mutant was examined by NMR, with the assignment consistent with the predicted Igt2 core OS structure (Table 1).
Example 3 mAb production and cross-reactivity mAb MC2-1 was generated to Mc Igt2 killed whole cells and selected by screening with Igt2 and wt LPS. The specificity of mAb MC2-1 was examined by FACS and was found to recognise Mc cells specifically and did not cross-react with meningococcal ceils, thus illustrating the specificity of the mAb, so that the possibility of unwanted non-specific cross- reactivity can be ruled out (Fig. 3).
Subsequently the ability of mAb MC 2-1 to recognise serotypes B and C was also examined by LPS ELiSA and illustrated that mAb MC2-1 was capable of recognising all three serotypes, revealing the potential of this inner core structure as a vaccine antigen (Fig. 4).
Furthermore, we examined Moraxella strains Igt1 and MC361/3m that elaborate LPS molecules that are more truncated than the Igt2 mutant, and these are not recognised by MC2-1. MC2-1 specificity is also shown as other bacterial species (Salmonella typhimuriυm, Mannheimia haemolytica, Haemophilus influenzae and Neisseria meningitidis) are not recognised. This once again illustrates the specificity of the mAb, so that the possibility of unwanted non-specific cross-reactivity can be ruled out, such that we know we are effectively targeting Moraxella cells.
Example 4 mAb MC2-1 Bactericidal activity
MAb MC 2-1 was bactericidal against wild type serotype A. (Fig. 5).
Example 5 New mAb production A second series of mAbs were raised to this Igt2 structure by the same standard methodology as used in Example 3. Cross-reactivity screening of the candidate mAbs obtained revealed a strong immunodominance of the terminal GIcNAc residue of the core OS (Fig. 6). Ascites fluid was raised to mAbs MC2-10 and -15 and the ascites fluid was titrated against LPS from the Igt2 mutant and serotypes A and C (Fig. 7).
The ascitic fluid was subsequently tested for their ability to recognise whole celts of Moraxella catarrhalis (Fig. 8), and was then tested in a bactericidal assay which revealed killing of the homologous strain and of the wild-type strain (Table 2).
Example 6 Lgt2/ 4 mutant construction and characterisation
As the terminal GIcNAc residue of the core OS appeared to be a somewhat dominant epitope, a double mutant Igt2 /Igt4 was prepared that lacks the GIcNAc residue, which could lead to an improved cross-reactive response. This structure is common to all three Mc serotypes (Fig. 9) and was confirmed by NMR spectroscopy (Table 3).
While the preferred embodiments of the invention have been described above, it will be recognized and understood that various modifications may be made therein, and the appended claims are intended to cover all such modifications which may fall within the spirit and scope of the invention.
.Tabie I . 1H & 13C NMR data for the Moraxello catarrhalis serotype A Igt2 mutant α-Glc-(1 -2)-β-Gic 1
I
6 α-GlcNAo-(1-2)-β-Glo-(1-4)-α-Glc-(1-5)-α-Kdo 3 t ! 1 β-Glc
Residue H- 1/(C- 1 ) H-2/(C-2) H-3/(C-3) H-4/(C~4ϊ H-5/(C-5) H-6/(C-όϊ
3,4,6-α-Glc 5.14 3.90 4.51 3.96 4.60 4.13, 4.03 (99.7) (73.7) (75.3) (73.7) (70.0) (67.8) t-β-Glc 5.07 3.34 3.52 3.36 3.51 nd (102.4) (73.9) (75.7) (69.9) (75.8)
2-β-Glc->4 5.20 3.38 3.59 3.46 3.49 3.82, 3.74 (97.5) (81.2) (74.7) (69.7) (75.8) (63.2)
2-β-Glc->6 4.61 3.49 3.56 3.42 3.42 nd (102.7) (75.8) (76.2) (69.7) (75.8) t-α-G IcNAc 5.09 4.03 3.73 3.57 3.81 nd (99.0) (53.9) (72.0) (69.8) (71.5) t-α-GIc 5.41 3.38 3.75 3.99 3.84 nd (96.7) (71.8) (72.9) (72.0) (71.5)
Table 2. Bactericidal titers' of mouse monoclonal antibodies raised against Moraxella catarrhalis stain Igt2 against serotype A wt and lg(2 mutant strains. Baby rabbit complement (1/8 dilution) was used.
Figure imgf000016_0001
'Bactericidal titers expressed as the reciprocal of the serum dilution yielding >= 50% bactericidal killing when compared to the no antibody control.
2Titers in bold and underlined illustrate bactericidal killing.
3Positive control was mouse monoclonal antibody MC2-1
Table 3. 1H & 13C NMR data for the Moraxelta catarrhalis serotype A Igi2 I Igt4 double mutant α-Glc-(1-2)-β-Glc 1 6 i β-Glc~(1-4)-α-Glc-(1 -5)-α-Kdo
? I 1 β-GIc
Residue H- 1/(C- 1 ) H-2/(C-2) H-3/(C-3) H-4/(C-4) H-5/(C-5) H-6/CC-6)
3,4,6-α-Glc 5.27 3.83 4.42 4.04 4.33 4.22 (99.4) (73.8) (75.2) (74.0) (70.0) 4.16 (67.2) t-β-Glc->3 5.02 3.34 3.51 3.40 3.51 nd (101.2) (73.4) (75.9) (69.7) (75.9) t-β-Glc->4 4.70 3.33 3.48 3.35 3.43 nd (101.4) (73.4) (75.8) (73.4) (75.8)
2-p-Glc 4.64 3.48 3,57 3.49 3.43 nd ( 103.0) (75.8) (76.3) (69.8) (75.7) t-α-Gic 5.39 3.58 3.75 4.04 3.80 nd (97.6) (72.7) (72.4) (71.7) (72.8)

Claims

Claims
1. An isolated lipopolysaccharide derived moiety consisting essentially of a conserved penta-glucosy! inner core moiety free of variable outer core oligosaccharide extensions.
2. An isolated iipopoiysaccharide derived moiety consisting essentially of a conserved penta-glucosyl inner core moiety having the structure I
α-Glc-(1-2)-β-Glc 1
6
R-(1 -2)-β-Glc-(1-4)-α-Glc-{1-5)-α-Kdo
3
1 β-GIc where R is hydrogen or 2-acetamido-2-deoxy-D-α-glucopyranose (GIcNAc), 'Kdo' is 2-keto-3-deoxy-octulosonic acid and 'GIc' is glucose.
3. A pharmaceutical composition for eliciting functional antibodies comprising the isolated lipopolysaccharide moiety of claims 3 or 4.
4. .A method for the production and harvesting of a functional cross-reactive antibody against Moraxella catarrhalis which comprises:
(a) generating antibodies to the lipopolysaccharide moiety of claims 3 or 4
(b) testing said antibodies against a plurality of Moraxella catarrhalis strains; and
(c) selecting those antibodies which are cross-reactive,
5. Use of the composition of claim 5 for the preparation of a medicament for treating a disease caused by infection with Moraxella catarrhalis.
6. A glycoconjugate comprising a lipopolysaccharide moiety consisting essentially of a penta-glucosy! inner-core moiety having the structure ! α-Glc-(1-2)-β-Glc 1
R-{1-2)-β-Glc-(1-4)-α-Glc-(1-5)-α-Kdo
3
1 β-GIc
where R is hydrogen or 2-acetamido-2-deoxy-D-α-gJucopyranose (GIcNAc), 1KcIo' is 2- keto-3-deoxy-octulosoπic acid and 'GIc' is glucose and an immunogenic carrier.
7. The glycoconjugate according to claim 6 wherein the lipopolysaccharide moiety and the immunogenic carrier are cross-linked with a linker molecule.
PCT/CA2009/001193 2008-09-04 2009-09-04 Identification of a conserved inner core oligosaccharide region of moraxella catarrhalis lipopolysaccharide as a vaccine antigen WO2010025541A1 (en)

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