WO2010005925A9 - Method and system for generating protein sequence alignments - Google Patents

Method and system for generating protein sequence alignments Download PDF

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Publication number
WO2010005925A9
WO2010005925A9 PCT/US2009/049749 US2009049749W WO2010005925A9 WO 2010005925 A9 WO2010005925 A9 WO 2010005925A9 US 2009049749 W US2009049749 W US 2009049749W WO 2010005925 A9 WO2010005925 A9 WO 2010005925A9
Authority
WO
WIPO (PCT)
Prior art keywords
protein sequence
sequence alignments
generating protein
generating
alignments
Prior art date
Application number
PCT/US2009/049749
Other languages
French (fr)
Other versions
WO2010005925A2 (en
Inventor
Aleksandar Poleksic
Mark Alan Fienup
Original Assignee
University Of Northern Iowa Research Foundation
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by University Of Northern Iowa Research Foundation filed Critical University Of Northern Iowa Research Foundation
Publication of WO2010005925A2 publication Critical patent/WO2010005925A2/en
Publication of WO2010005925A9 publication Critical patent/WO2010005925A9/en

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search

Landscapes

  • Physics & Mathematics (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
PCT/US2009/049749 2008-07-11 2009-07-07 Method and system for generating protein sequence alignments WO2010005925A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US7993208P 2008-07-11 2008-07-11
US61/079,932 2008-07-11

Publications (2)

Publication Number Publication Date
WO2010005925A2 WO2010005925A2 (en) 2010-01-14
WO2010005925A9 true WO2010005925A9 (en) 2010-03-04

Family

ID=41432731

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2009/049749 WO2010005925A2 (en) 2008-07-11 2009-07-07 Method and system for generating protein sequence alignments

Country Status (1)

Country Link
WO (1) WO2010005925A2 (en)

Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN107526939A (en) * 2017-06-30 2017-12-29 南京理工大学 A kind of quick small molecule structure alignment schemes

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US11031094B2 (en) 2015-07-16 2021-06-08 Dnastar, Inc. Protein structure prediction system

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN107526939A (en) * 2017-06-30 2017-12-29 南京理工大学 A kind of quick small molecule structure alignment schemes
CN107526939B (en) * 2017-06-30 2020-10-16 南京理工大学 Rapid alignment method for small molecular structure

Also Published As

Publication number Publication date
WO2010005925A2 (en) 2010-01-14

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