WO2009073167A3 - Identification and diagnosis of pulmonary fibrosis using mucin genes, and related methods and compositions - Google Patents

Identification and diagnosis of pulmonary fibrosis using mucin genes, and related methods and compositions Download PDF

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Publication number
WO2009073167A3
WO2009073167A3 PCT/US2008/013271 US2008013271W WO2009073167A3 WO 2009073167 A3 WO2009073167 A3 WO 2009073167A3 US 2008013271 W US2008013271 W US 2008013271W WO 2009073167 A3 WO2009073167 A3 WO 2009073167A3
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WO
WIPO (PCT)
Prior art keywords
pulmonary fibrosis
diagnosis
compositions
identification
related methods
Prior art date
Application number
PCT/US2008/013271
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French (fr)
Other versions
WO2009073167A2 (en
Inventor
David A. Schwartz
Lauranell Burch
Mark P. Steele
Aretha J. Herron
Kevin Brown
Marvin I. Schwarz
James E. Lloyd
Marcy Speer
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The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services
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Publication date
Application filed by The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services filed Critical The Government Of The United States Of America As Represented By The Secretary Of The Department Of Health And Human Services
Publication of WO2009073167A2 publication Critical patent/WO2009073167A2/en
Publication of WO2009073167A3 publication Critical patent/WO2009073167A3/en

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/136—Screening for pharmacological compounds
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/158—Expression markers
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/172—Haplotypes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Zoology (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
  • Acyclic And Carbocyclic Compounds In Medicinal Compositions (AREA)

Abstract

Individuals with polymorphisms in MUC5AC are more likely to develop idiopathic interstitial pneumonia (IIP) or pulmonary fibrosis. This discovery provides methods to identify susceptible individuals, and also provides approaches to treatment in this life threatening disease that previously had no known beneficial therapy. Given the relatively high prevalence of some of these SNPs in the general population, it is likely that variants MUC5AC result in susceptibility to other fibroproliferative lung diseases, including asthma, chronic obstructive lung disease, granulomatous lung diseases, and pneumonconioses.
PCT/US2008/013271 2007-12-03 2008-12-02 Identification and diagnosis of pulmonary fibrosis using mucin genes, and related methods and compositions WO2009073167A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US99207907P 2007-12-03 2007-12-03
US60/992,079 2007-12-03

Publications (2)

Publication Number Publication Date
WO2009073167A2 WO2009073167A2 (en) 2009-06-11
WO2009073167A3 true WO2009073167A3 (en) 2009-09-03

Family

ID=40718413

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2008/013271 WO2009073167A2 (en) 2007-12-03 2008-12-02 Identification and diagnosis of pulmonary fibrosis using mucin genes, and related methods and compositions

Country Status (1)

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WO (1) WO2009073167A2 (en)

Families Citing this family (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CA2787994C (en) 2010-01-26 2021-01-12 National Jewish Health Diagnosis and prognosis of idiopathic interstitial pneumonia by rs35705950 snp in muc5b gene promoter
WO2014197713A2 (en) * 2013-06-05 2014-12-11 The Regents Of The University Of Colorado, A Body Corporate Molecular phenotyping of idiopathic interstitial pneumonia identifies two subtypes of idiopathic pulmonary fibrosis
CN115322133B (en) * 2022-07-29 2023-07-04 四川大学华西医院 Application of compound in preparation of pulmonary fibrosis viscosity response fluorescent probe

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP1403638A1 (en) * 2002-09-25 2004-03-31 Mondobiotech SA Molecular methods for diagnosing interstitial lung diseases
US20060275808A1 (en) * 2005-05-20 2006-12-07 Young Robert P Methods of analysis of polymorphisms and uses thereof
US20060292562A1 (en) * 2002-05-29 2006-12-28 Pollard Harvey B Methods of identifying genomic and proteomic biomarkers for cystic fibrosis, arrays comprising the biomarkers and methods of using the arrays
US20070099202A1 (en) * 2005-05-19 2007-05-03 Young Robert P Methods and compositions for assessment of pulmonary function and disorders

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20060292562A1 (en) * 2002-05-29 2006-12-28 Pollard Harvey B Methods of identifying genomic and proteomic biomarkers for cystic fibrosis, arrays comprising the biomarkers and methods of using the arrays
EP1403638A1 (en) * 2002-09-25 2004-03-31 Mondobiotech SA Molecular methods for diagnosing interstitial lung diseases
US20070099202A1 (en) * 2005-05-19 2007-05-03 Young Robert P Methods and compositions for assessment of pulmonary function and disorders
US20060275808A1 (en) * 2005-05-20 2006-12-07 Young Robert P Methods of analysis of polymorphisms and uses thereof

Also Published As

Publication number Publication date
WO2009073167A2 (en) 2009-06-11

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