WO2009004106A1 - Porous biotin carrier, and associated production methods and uses - Google Patents

Porous biotin carrier, and associated production methods and uses Download PDF

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WO2009004106A1
WO2009004106A1 PCT/ES2008/070105 ES2008070105W WO2009004106A1 WO 2009004106 A1 WO2009004106 A1 WO 2009004106A1 ES 2008070105 W ES2008070105 W ES 2008070105W WO 2009004106 A1 WO2009004106 A1 WO 2009004106A1
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avidin
biotin
compound
group
compound according
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PCT/ES2008/070105
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Spanish (es)
French (fr)
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Francisco SANTOYO GONZÁLEZ
Fernando HERNÁNDEZ MATEO
Mariano ORTEGA MUÑOZ
Rafael Salto Gonzalez
Maria Dolores GIRÓN GONZÁLEZ
Natalia Sevillano Tripero
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Universidad De Granada
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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D495/00Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms
    • C07D495/02Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms in which the condensed system contains two hetero rings
    • C07D495/04Ortho-condensed systems
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J20/00Solid sorbent compositions or filter aid compositions; Sorbents for chromatography; Processes for preparing, regenerating or reactivating thereof
    • B01J20/281Sorbents specially adapted for preparative, analytical or investigative chromatography
    • B01J20/286Phases chemically bonded to a substrate, e.g. to silica or to polymers
    • B01J20/289Phases chemically bonded to a substrate, e.g. to silica or to polymers bonded via a spacer
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01JCHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J20/00Solid sorbent compositions or filter aid compositions; Sorbents for chromatography; Processes for preparing, regenerating or reactivating thereof
    • B01J20/30Processes for preparing, regenerating, or reactivating
    • B01J20/32Impregnating or coating ; Solid sorbent compositions obtained from processes involving impregnating or coating
    • B01J20/3231Impregnating or coating ; Solid sorbent compositions obtained from processes involving impregnating or coating characterised by the coating or impregnating layer
    • B01J20/3242Layers with a functional group, e.g. an affinity material, a ligand, a reactant or a complexing group
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07FACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
    • C07F7/00Compounds containing elements of Groups 4 or 14 of the Periodic Table
    • C07F7/02Silicon compounds
    • C07F7/08Compounds having one or more C—Si linkages
    • C07F7/0803Compounds with Si-C or Si-Si linkages
    • C07F7/081Compounds with Si-C or Si-Si linkages comprising at least one atom selected from the elements N, O, halogen, S, Se or Te
    • C07F7/0812Compounds with Si-C or Si-Si linkages comprising at least one atom selected from the elements N, O, halogen, S, Se or Te comprising a heterocyclic ring
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07FACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
    • C07F7/00Compounds containing elements of Groups 4 or 14 of the Periodic Table
    • C07F7/02Silicon compounds
    • C07F7/08Compounds having one or more C—Si linkages
    • C07F7/18Compounds having one or more C—Si linkages as well as one or more C—O—Si linkages
    • C07F7/1804Compounds having Si-O-C linkages
    • BPERFORMING OPERATIONS; TRANSPORTING
    • B01PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01DSEPARATION
    • B01D15/00Separating processes involving the treatment of liquids with solid sorbents; Apparatus therefor
    • B01D15/08Selective adsorption, e.g. chromatography
    • B01D15/26Selective adsorption, e.g. chromatography characterised by the separation mechanism
    • B01D15/38Selective adsorption, e.g. chromatography characterised by the separation mechanism involving specific interaction not covered by one or more of groups B01D15/265 - B01D15/36
    • B01D15/3804Affinity chromatography
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07BGENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
    • C07B2200/00Indexing scheme relating to specific properties of organic compounds
    • C07B2200/11Compounds covalently bound to a solid support

Definitions

  • BIOTINE-POROUS SUPPORT BIOTINE-POROUS SUPPORT, METHODS OF OBTAINING AND USES
  • the present invention relates to a compound comprising biotin linked to an inorganic porous support by means of a "linker” (binding group) containing the group 1,3,3-triazole. More particularly, the inorganic porous support is silica. In addition, it refers to its method of obtaining and its uses for the purification of avidin and biotinylated proteins, as well as for fluorescent avidin marking
  • Biotin is an essential vitamin in the metabolism that constitutes the prosthetic group of a set of enzymes called carboxylases that participate in key reactions of the intermediate metabolism. Biotin deficiency, or genetic defects that prevent its covalent binding to carboxylases, leads to serious metabolic diseases, which normally produce situations of acidosis and coma.
  • biotin and avidin presents the ability to bind strongly and sequester biotin.
  • the binding constant between biotin and avidin is approximately 10 ⁇ 15 M, which probably constitutes the greatest affinity for a ligand described for any biological system.
  • avidin The interaction of avidin with biotin occurs under physiological conditions of pH and ionic strength.
  • biotinylation of proteins There are numerous reagents for the biotinylation of proteins and there is commercially avidin (or an analogous protein of its bacterial origin, streptavidin) either alone, labeled with different fluorophores or immobilized on agarose.
  • iminobiotin has been proposed, with a lower affinity for avidin, as a ligand.
  • iminobiotin is much more expensive than that of biotin in the mapping of ligands and also cannot be applied to biotinylated proteins naturally.
  • Another alternative has been the use of affinity columns that employ monomeric avidin.
  • biotinylated supports on the market, the most widespread being those based on agarose and sepharose.
  • biotin and related compounds have been covalently bound to a variety of surfaces, primarily glass, silicon oxide, polymers and gold.
  • the covalent binding of biotin to these solids or surfaces is carried out using active derivatives of biotin and supports or surfaces functionalized in addition to both chemical and photochemical methods.
  • activated biotin derivatives use the side chain of the valeric acid to incorporate different groups that do not interfere in the union with the avidin and their counterparts
  • o Fluorescent avidin column marking with the following advantages: ease of operation of the marking; and possibility of performing the marking without affecting one of the binding sites of the avidin to the biotin that remains protected by the binding to the porous support through the biotin.
  • biotinylated proteins in vitro and in general biotinylated ligands.
  • biotin-avidin binding it is possible to select specifically the biotin-avidin binding to be released: the binding with the supported biotin or the binding with the biotin of the ligand.
  • purified ligands can be easily characterized by MALDI-TOF spectrometry.
  • a first aspect of the present invention refers to the compound, hereinafter compound of the invention, which comprises: a. biotin or any of its derivatives of general formula (I); b. a "linker” or linker comprising a triazole group, more specifically a 1,3,3-triazole group; and c. a porous support.
  • Z is CH 2 or CH 3 when X does not exist; preferably Z is CH 2 .
  • R 1 is O or NH, preferably R 1 is NH; Y
  • R 2 is a group selected from a (C1-C10) alkyl; (CH 2 CH 2 O) n CH 2 , where n has a value from 0 to 10; or a (CH 2 ) 4 CH (NH 2 ) COOCH 2 .
  • R 2 is a methylene.
  • biotin derivatives we mean compounds that have a structure analogous to biotin and whose biological function is similar, such as biocitin, iminobitin, destiobitin, etc.
  • the "linker” has the structure that is represented by the general formulas (II) or (III):
  • R 3 is a group selected from a (C1-C10) alkyl
  • R 3 is a methylene.
  • R 4 is selected from the group comprising O, C (O) R 1 , R 1 C (O) R 1 or R 1 C (S) R 1 (where R 1 is O or NH); Y
  • n has the value from 1 to 11.
  • m is 1, 2 or 3.
  • alkyl refers in the present invention to aliphatic, linear or branched chains, having 1 to 10 carbon atoms, for example, methyl, ethyl, n-propyl, i-propyl, n-butyl, t-butyl , n-pentyl, etc.
  • porous solid support we mean here an inorganic porous support, such as but not limited to silica, alumina, siliceous earth, zeolite, or an organic porous support selected from the group comprising celluloses or resins, as for example but not limited to polyamine or Merrifield resin.
  • the support is an inorganic material, and more preferably the support is silica.
  • a preferred embodiment of the invention comprises a compound of formula (Vl), also referred to herein as "biotin-silica”:
  • Another aspect of the present invention relates to a process for obtaining the compounds of the invention, which comprises the following steps: a) functionalization of the porous support using a compound comprising an azido (N 3 ) or alkyne (C ⁇ CH) terminal group.
  • step (c) reaction of the functionalized support of step (a) with biotin or any of its functionalized derivatives complementary to step (b) by reaction of 1, 3-dipolar cycloaddition ("click-chemistry").
  • reaction of the present invention can be carried out by means of the same conditions as other click-chemistry reactions described in the state of the art, temperature, reaction time, etc. including the use of catalysts already described.
  • the cycloaddition reaction occurs between an azido group of the functionalized porous support and an alkyne group of the functionalized biotin.
  • Another aspect of the present invention relates to the use of the compounds of the invention for the purification of avidin.
  • Another aspect of the present invention relates to the use of the compounds described in the present invention for the immobilization of avidin.
  • a complex is formed which can subsequently be used for the purification of biotinylated ligands or for the avidin labeling.
  • biotinylated ligands The purification of biotinylated ligands is one of the main applications pursued with the use of this technology based on the interaction of avidin with biotin, which is the identification and isolation of biotinylated proteins in vitro.
  • proteomics With the current development of proteomics, the ability to identify and purify the proteins thus modified, using mild conditions that allow their subsequent analysis by two-dimensional electrophoresis and mass spectrometry, is a pressing need.
  • the purification of avidin and / or biotinylated ligands using the avidin-compound complex of the invention can be carried out by means of adequate pH selection.
  • the biotinylated avidin-ligand complex can elute at pH ⁇ 2.5, while at pH 4 it elutes only the biotinylated ligand.
  • a further aspect of the present invention refers to the use of the compound of the invention for fluorescent avidin marking once it has been previously immobilized to said compound of the invention. This operation allows the safeguarding of the active center of the avidin through which the avidin has been bound to the compound of the invention, thus maintaining its functionality once it is eluted from the support.
  • FIG. 1. Shows the affinity chromatography of the avidin using the compound of formula (Vl) (also called biotin-silica).
  • Vl compound of formula (Vl) (also called biotin-silica).
  • A. Chromatogram of the purification of avidin from a raw egg extract
  • B. Electrophoresis in SDS-PAGE of the fractions charged and eluted in the column.
  • FIG. 2. Shows an SDS-PAGE gel of the eluted fractions for the biotin-silica compound.
  • FIG. 3. Shows the avidin mapping with compound 7 (2-hydroxyethoxy) -4-nitro-2,1,3-benzooxadiazole (NBD-OCH 2 CH 2 OH).
  • A. Chromatogram of the elution of the biotin-silica compound.
  • B. SDS-PAGE electrophoresis of the eluted fractions. Where "L” corresponds to the washing of the column prior to elution.
  • FIG. 4. Shows the purification of biotinylated horseradish peroxidase in vitro
  • A. Chromatogram of the elution in the resin. The absorbance at 440 nm is an index of the enzymatic activity of the eluted POD.
  • B. SDS-PAGE electrophoresis of the eluted fractions. POD and avidin have been included as electrophoresis standards.
  • biotin-silica was carried out in several steps:
  • Biotin (370 mg) was dissolved in distilled thionyl chloride (5 ml_) and stirred for 30 min. The thionyl chloride was evaporated in vacuo and coevaporated with anhydrous toluene. Biotin acid chloride was dissolved in anhydrous CI 2 CH 2 (5 ml_) and an excess of propargyl amine (207 ⁇ l_, 3 equiv.) was added. The reaction mixture was stirred under argon for 30 min. and after this time the solvent was evaporated and purified by column chromatography (CI 2 CH 2 : Me0H, 9: 1) to obtain a white solid corresponding to (XIII) (359 mg, 84%).
  • "a” represents: i) CI 2 SO (5ml_), t. amb., 30 min ii) NH 2 CH 2 C ⁇ CH, CH 2 CI 2 .
  • biotin-silica (Vl) resulting biotin-silica (Vl) and washed with MeOH (2 x 30 mL), EDTA disodium salt (50 mM, 2 x 30 mL), water (2 x 30 mL), acetone (2 x 30 mL) and CH 2 CI 2 (2 x 30 mL).
  • biotin-silica (Vl) is then dried in vacuo (1 mm Hg) at 50 0 C for 16 h yielding 3.240 g-
  • EXAMPLE 2 Purification of egg white avidin.
  • the ability to bind avidin to biotin-silica (Vl) from egg white samples was tested. For this, column chromatography systems were used as well as rapid microfiltration centrifugation systems. This last system allowed the simple handling of numerous small volume samples in a reduced time since it requires small centrifugation times of approximately 30 seconds.
  • avidin was purified from egg white previously sonicated using methods previously described previously (Cf. Hofmann et al., 1980, Proc. Nati. Acad. Sci., Vol. 77, pp. 4666-4668; Airenne et al., 1997, Protein expression and purification, vol. 9, pp. 100-108; Hytonen et al, 2003, Biochem. J., vol 372, pp. 219-225).
  • FIG. 1 shows the results of an affinity chromatography on a biotin-silica (Vl) column.
  • a diluted 1 1 sample of egg white previously sonicated at pH 11 was loaded on said column.
  • the pH was monitored as well as the absorbance at 280 nm and an electrophoresis was performed in 15% SDS-PAGE of the eluted fractions. During the whole process the temperature was maintained at 4 0 C. It could be observed that the column efficiently retains a high percentage of the avidin content of the crude extract, which was subsequently eluted almost quantitatively at pH 2.5. On the contrary, elution at pH 4 was not able to break the binding of avidin to the matrix. The approximate yield of the process is 0.1 mg of avidin per gram of resin.
  • the avidin can be charged at pH 7.5 and likewise the avidin can be eluted in a 0.2 N HCI solution that can subsequently be neutralized using volatile buffers (for example carbonate / bicarbonate buffer) which allows obtaining the protein in Very low ionic strength conditions.
  • volatile buffers for example carbonate / bicarbonate buffer
  • EXAMPLE 3 Fluorescent dyeing of egg white avidin bound to biotin-silica resin (Vl).
  • the biotin-silica resin (2 g) was used, which was incubated with 15 ml_ of a raw sonicized egg extract diluted 1: 1. The pH was set at 11 and after one hour of incubation, the suspension of the resin was compacted in a column. After washing, 2 ml_ of a 2 mM solution of NBD-OCH 2 CH 2 OH at pH 11 were added (in all cases this washing solution at pH 11 is formed by 50 mM Na 2 CO 3 , 1 M NaCI pH 11) and the solution was recirculated for 16 hours through the resin at room temperature. The column was then washed with buffer at pH 11 and the bound avidin was eluted with a 0.2 N solution of HCI.
  • EXAMPLE 4 Purification of biotinylated proteins in vitro by avidin bound to the biotin-silica resin (Vl).
  • a green fluorescent protein (GFP) was labeled with biotin using the succinyl ester of 6-biotinyl hexanoic acid. Subsequently, it was purified by binding to avidin that had previously been immobilized on the biotin-silica using the microfilter system with only 100 mg of silica-biotin resin. Elution was performed with 0.2 N HCI and the eluate, after being lyophilized, analyzed by MALDI-TOF. Corresponding molecular weights were observed with the avidin monomer, as well as that of a GFP molecule modified with 4 biotins. Thus, it was demonstrated that this technique is suitable for the purification and characterization of biotinylated proteins.
  • biotinylated peroxidase was recognized by the avidin attached to the column and can be eluted in a selective manner at pH 4 (the elution of the peroxidase precedes a fraction to the change of the pH in the chromatography). This elution was produced without releasing the avidin bound to the column (see the electrophoresis in SDS-PAGE fraction 5) that is only eluted at pH 2 (Fraction 11 in the electrophoresis in SDS-PAGE).
  • this system has the advantage of allowing the elution of the avidin-biotinylated ligand complex if an HCI buffer at pH 1-2.5 is chosen as the elution system or the specific elution of the biotinylated ligand if an elution system is chosen as a buffer system at pH 4.

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  • Heterocyclic Carbon Compounds Containing A Hetero Ring Having Oxygen Or Sulfur (AREA)

Abstract

The invention relates to a compound comprising biotin joined to a porous carrier by means of a linker (joining or linking group) containing the 1, 2, 3-triazole group. The invention also relates to the method for obtaining said compound and to the uses thereof for purifying avidin and biotinylated proteins, and for the fluorescent marking of avidin.

Description

BIOTINA-SOPORTE POROSO, MÉTODOS DE OBTENCIÓN Y USOS BIOTINE-POROUS SUPPORT, METHODS OF OBTAINING AND USES
La presente invención se refiere a un compuesto que comprende biotina unida a un soporte poroso inorgánico mediante un "linker" (grupo de unión) que contiene el grupo 1 ,2,3-triazol. Más particularmente, el soporte poroso inorgánico es sílice. Además, se refiere a su método de obtención y sus usos para Ia purificación de avidina y proteínas biotiniladas, así como para el mareaje fluorescente de avidinaThe present invention relates to a compound comprising biotin linked to an inorganic porous support by means of a "linker" (binding group) containing the group 1,3,3-triazole. More particularly, the inorganic porous support is silica. In addition, it refers to its method of obtaining and its uses for the purification of avidin and biotinylated proteins, as well as for fluorescent avidin marking
ESTADO DE LA TÉCNICA ANTERIORSTATE OF THE PREVIOUS TECHNIQUE
La biotina es una vitamina esencial en el metabolismo que constituye el grupo prostético de un conjunto de enzimas denominado carboxilasas que participan en reacciones clave del metabolismo intermediario. El déficit de biotina, o defectos genéticos que impiden su unión covalente a las carboxilasas, conduce a graves enfermedades metabólicas, que normalmente producen situaciones de acidosis y coma.Biotin is an essential vitamin in the metabolism that constitutes the prosthetic group of a set of enzymes called carboxylases that participate in key reactions of the intermediate metabolism. Biotin deficiency, or genetic defects that prevent its covalent binding to carboxylases, leads to serious metabolic diseases, which normally produce situations of acidosis and coma.
Una posible situación de deficiencia de biotina se produce por una ingesta excesiva de huevos crudos. En Ia clara de huevo existe una proteína denominada avidina (Cf. DeLange, RJ. , 1969, J. Biol. Chem., vol. 245, pp.A possible situation of biotin deficiency is caused by an excessive intake of raw eggs. In egg white there is a protein called avidin (Cf. DeLange, RJ., 1969, J. Biol. Chem., Vol. 245, pp.
907-916), que presenta Ia capacidad de unir fuertemente biotina y secuestrarla. De hecho, Ia constante de unión entre Ia biotina y Ia avidina es de aproximadamente 10~15 M, Io que constituye probablemente Ia mayor afinidad por un ligando descrita para cualquier sistema biológico.907-916), which presents the ability to bind strongly and sequester biotin. In fact, the binding constant between biotin and avidin is approximately 10 ~ 15 M, which probably constitutes the greatest affinity for a ligand described for any biological system.
Esta alta afinidad, así como Ia relativa facilidad de obtener avidina, ha determinado que exista un alto interés en el estudio y desarrollo de sistemas de afinidad que se basen en Ia fuerte interacción entre estas dos moléculas. Así se han desarrollado sistemas de mareaje de proteínas, ácidos nucleicos, diversos constituyentes celulares e incluso células completas, para posteriormente ser reconocidos por moléculas de avidina, bien inmovilizada (creando sistemas de cromatografía de afinidad) o bien marcada por Ia unión a fluoroforos o enzimas (creando sistemas de detección, usualmente en fase sólida). Las técnicas descritas en el párrafo anterior han sido utilizadas clásicamente en immunología para Ia detección de antígenos o anticuerpos previamente biotinilados. Actualmente, esta tecnología está en un proceso de expansión, extendiéndose su uso a Ia proteómica y genómica, en el mareaje, separación y/o inmovilización de proteínas o ácidos nucleicos.This high affinity, as well as the relative ease of obtaining avidin, has determined that there is a high interest in the study and development of affinity systems that are based on the strong interaction between these two molecules. Thus, protein, nucleic acid, various cell constituent and even whole cell mapping systems have been developed to later be recognized by avidin molecules, either immobilized (creating affinity chromatography systems) or marked by the binding to fluorophores or enzymes (creating detection systems, usually in solid phase). The techniques described in the previous paragraph have been used classically in immunology for the detection of previously biotinylated antigens or antibodies. Currently, this technology is in an expansion process, extending its use to proteomics and genomics, in the marking, separation and / or immobilization of proteins or nucleic acids.
La interacción de Ia avidina con Ia biotina ocurre en condiciones fisiológicas de pH y fuerza iónica. Existen numerosos reactivos para Ia biotinilización de proteínas y existe comercialmente avidina (o una proteína análoga suya de origen bacteriano, Ia estreptavidina) ya sea sola, marcada con diferentes fluoróforos o inmovilizada sobre agarosa.The interaction of avidin with biotin occurs under physiological conditions of pH and ionic strength. There are numerous reagents for the biotinylation of proteins and there is commercially avidin (or an analogous protein of its bacterial origin, streptavidin) either alone, labeled with different fluorophores or immobilized on agarose.
Un problema importante, y sólo parcialmente resuelto, de esta tecnología es, paradójicamente, Ia elevada afinidad de Ia avidina por Ia biotina. Esta elevada afinidad hace que sea necesario utilizar condiciones extremas para romper Ia interacción de ambas moléculas. Estas condiciones extremas implican usualmente el empleo de agentes desnaturalizantes como SDS o clorhidrato de guanidinio junto con pHs inferiores a 2.An important problem, and only partially solved, of this technology is, paradoxically, the high affinity of avidin for biotin. This high affinity makes it necessary to use extreme conditions to break the interaction of both molecules. These extreme conditions usually involve the use of denaturing agents such as SDS or guanidinium hydrochloride together with pHs below 2.
En técnicas cromatográficas basadas en Ia interacción de Ia avidina con Ia biotina, ya sea para Ia purificación de Ia propia avidina o para Ia cromatografía de afinidad de moléculas marcadas con biotina, el uso de estas condiciones extremas de elución y Ia consiguiente desnaturalización de las proteínas dificulta las aplicaciones posteriores de las mismas.In chromatographic techniques based on the interaction of the avidin with the biotin, either for the purification of the avidin itself or for the affinity chromatography of molecules labeled with biotin, the use of these extreme conditions of elution and the consequent denaturation of the proteins hinders subsequent applications.
Para soslayar este problema, se ha propuesto el uso de iminobiotina, con una menor afinidad por Ia avidina, como ligando. No obstante, el uso de iminobiotina es mucho más caro que el de biotina en el mareaje de ligandos y además no puede ser aplicado a las proteínas biotiniladas de manera natural. Otra alternativa ha sido el uso de columnas de afinidad que emplean avidina monomérica.To avoid this problem, the use of iminobiotin has been proposed, with a lower affinity for avidin, as a ligand. However, the use of iminobiotin is much more expensive than that of biotin in the mapping of ligands and also cannot be applied to biotinylated proteins naturally. Another alternative has been the use of affinity columns that employ monomeric avidin.
La purificación inicial de avidina por cromatografía de afinidad se realizó en 1968 (Cf. Cuatrecasas, P. et al., 1968, Biochem. Biophys. Res. Commun., vol. 33, pp. 235-239) utilizando una columna de biocitina-sefarosa. La elusión de Ia avidina de esta columna implicaba el uso de cloruro de guanidinio 6 M a pH 1.5. Posteriormente, en 1980 (Cf. Hofmann et al., 1980, Proc. Nati. Acad. Sci., vol. 77, pp. 4666-4668), fue descrito el uso de columna de iminobiotina para Ia purificación de estreptavidina utilizando condiciones de elución más suaves. La unión de avidina o estreptavidina a este tipo de columnas implica el uso de un elevado pH (en torno a 11 ) ya que a este pH se produce Ia unión efectiva de Ia iminobiotina a Ia avidina puesto que Ia base libre de Ia iminobiotina es Ia que es reconocida por Ia avidina (Cf. Green, N. M., 1966, Biochem. J., vol 101 , pp. 774-780). La elución en este tipo de columnas se produce a pH 4.The initial purification of avidin by affinity chromatography was performed in 1968 (Cf. Cuatrecasas, P. et al., 1968, Biochem. Biophys. Res. Commun., vol. 33, pp. 235-239) using a biocitin-sepharose column. The avoidance of avidin from this column involved the use of 6 M guanidinium chloride at pH 1.5. Later, in 1980 (Cf. Hofmann et al., 1980, Proc. Nati. Acad. Sci., Vol. 77, pp. 4666-4668), the use of iminobiotin column for streptavidin purification using conditions of streptavidin was described. softer elution. The binding of avidin or streptavidin to this type of columns implies the use of a high pH (around 11) since at this pH the effective binding of the iminobiotin to the avidin occurs since the free base of the iminobiotin is Ia which is recognized by avidin (Cf. Green, NM, 1966, Biochem. J., vol 101, pp. 774-780). Elution in this type of columns occurs at pH 4.
Otras estrategias propuestas han sido el uso de otros derivados de biotina como Ia destiobiotina, cuya menor afinidad por Ia unión a avidina permite su desplazamiento por biotina sin modificar (Cf. Hirsch, J. D. et al., 2002, Anal. Biochem., vol 308, pp. 343-357). De cualquier manera, clásicamente en Ia purificación de avidina siguen empleándose columnas de iminobiotina y el rendimiento típico de las mismas es de aproximadamente un 90% con una capacidad de unión de aproximadamente 0.75 mg de avidina por mL de resina empleada (Cf. Heney, G. et al., 1981 , Anal. Biochem., vol. 114, pp. 92-96). En muchas ocasiones, aunque Ia purificación se basa fundamentalmente en una etapa de afinidad se incorporan etapas adicionales como una precipitación previa con sulfato amónico o un intercambio iónico posterior a Ia cromatografía de afinidad.Other proposed strategies have been the use of other biotin derivatives such as destiobiotin, whose lower affinity for binding to avidin allows its displacement through unmodified biotin (Cf. Hirsch, JD et al., 2002, Anal. Biochem., Vol 308 , pp. 343-357). In any case, iminobiotin columns are still used in the purification of avidin and the typical yield thereof is approximately 90% with a binding capacity of approximately 0.75 mg of avidin per mL of resin used (Cf. Heney, G . et al., 1981, Anal. Biochem., vol. 114, pp. 92-96). In many cases, although the purification is fundamentally based on an affinity stage, additional steps are incorporated such as a previous precipitation with ammonium sulfate or an ion exchange after affinity chromatography.
Actualmente existen en el mercado diferentes soportes biotinilados siendo los más extendidos los basados en agarosa y sefarosa. De forma análoga, Ia biotina y compuestos relacionados han sido unidos covalentemente a una variedad de superficies, fundamentalmente de vidrio, oxido de silicio, polímeros y oro. La unión covalente de biotina a estos sólidos o superficies es llevada a cabo usando derivados activos de Ia biotina y soportes o superficies funcionalizadas complementariamente tanto a través de métodos químicos como fotoquímicos. La mayoría de los derivados activados de biotina usan Ia cadena lateral del acido valérico para incorporar distintos grupos que no interfieren en Ia unión con Ia avidina y sus homólogos. Entre los más usados se encuentran esteres activados derivados de N-hidoxisuccinimida, maleimida derivado, el iodoacetil derivado, el piridil disulfuro derivado, el hidrazido derivado y otros derivados conteniendo grupos fotoactivables que son anclados a los soportes o superficies a través de uniones de tipo amida, tioeter, disulfuro o hidrazona fundamentalmente (cf. Smith, C. L., et al., 2006, Top. Curr. Chem. VoI 261 , pp. 63-90)Currently there are different biotinylated supports on the market, the most widespread being those based on agarose and sepharose. Similarly, biotin and related compounds have been covalently bound to a variety of surfaces, primarily glass, silicon oxide, polymers and gold. The covalent binding of biotin to these solids or surfaces is carried out using active derivatives of biotin and supports or surfaces functionalized in addition to both chemical and photochemical methods. The majority of activated biotin derivatives use the side chain of the valeric acid to incorporate different groups that do not interfere in the union with the avidin and their counterparts Among the most used are activated esters derived from N-hidoxysuccinimide, maleimide derivative, iodoacetyl derivative, pyridyl disulfide derivative, hydrazide derivative and other derivatives containing photoactivatable groups that are anchored to the supports or surfaces through amide type junctions , thioether, disulfide or hydrazone primarily (cf. Smith, CL, et al., 2006, Top. Curr. Chem. VoI 261, pp. 63-90)
La cicloadición de alquinos y azidas (Reacción de Huisgen) (Cf. R. Huisgen, In 1,3-Dipolar Cycloaddition Chemistry (Ed.: A. Padwa), Willey, New York, 1984, pp. 1-176) se ha establecido recientemente como una importante herramienta sintética dentro del concepto de "click-chemistry" (cf. KoIb H. C. et al. 2001, Angew Chem lnt Ed, vol. 40, pp. 2005) especialmente desde el descubrimiento de su catálisis regioselectiva y a temperatura ambiente mediante Cu(I) (cf. Rostovtsev, V. V. et al. 2002, Angew. Chem. Int. Ed., vol. 41 , pp. 2596; TornΘe, C. W. et al. 2002, J. Org. Chem., vol. 67, pp. 3057-3064; WO03101972 A1 ). Las principales ventajas de esta reacción son Ia fácil introducción de grupos azido y alquino en los sustratos y Ia estabilidad de ambas funciones que toleran agua y oxigeno, y que permiten el ensamblaje modular de diferentes moléculas. La formación de los triazoles resultante de Ia fusión de ambas funciones es irreversible y normalmente transcurre con muy altos rendimientos. Debido a estas notables características, se han desarrollado una gran cantidad de aplicaciones en ciencia biomédica, síntesis orgánica y ciencia de los materiales mediante el uso de Ia "click-chemistry" (cf. Wang, Q. et al. 2005, Lett. Org. Chem., vol. 2, pp. 293-301 ; KoIb, H. C. et al. 2003, Drug Discov. Today, vol. 8, pp. 1128-1137; Bock, V. D., et al. 2005, Eur. J. Org. Chem., pp. 51-68; Lutz, J. F. 2007, Angew. Chem. Int. Ed. vol. 46, pp.1018-1023). En particular, Ia funcionalización de soportes basados en gel de sílice (cf. Lummerstorfer, T. et al. 2004, J. Phys. Chem. B, vol. 108, pp. 3963-3966) y agarosa (cf. Punna, S. et al., 2005, Bioconjugate Chem., vol. 16, pp. 1536- 1541 ) se ha realizado usando esta metodología. EXPLICACIÓN DE LA INVENCIÓNThe cycloaddition of alkynes and azides (Huisgen Reaction) (Cf. R. Huisgen, In 1,3-Dipolar Cycloaddition Chemistry (Ed .: A. Padwa), Willey, New York, 1984, pp. 1-176) has recently established as an important synthetic tool within the concept of "click-chemistry" (cf. KoIb HC et al. 2001, Angew Chem lnt Ed, vol. 40, pp. 2005) especially since the discovery of its regioselective catalysis and at room temperature by Cu (I) (cf. Rostovtsev, VV et al. 2002, Angew. Chem. Int. Ed., vol. 41, pp. 2596; TornΘe, CW et al. 2002, J. Org. Chem., vol. 67, pp. 3057-3064; WO03101972 A1). The main advantages of this reaction are the easy introduction of azido and alkyne groups in the substrates and the stability of both functions that tolerate water and oxygen, and that allow the modular assembly of different molecules. The formation of the triazoles resulting from the fusion of both functions is irreversible and usually takes place with very high yields. Due to these remarkable characteristics, a large number of applications in biomedical science, organic synthesis and materials science have been developed through the use of "click-chemistry" (cf. Wang, Q. et al. 2005, Lett. Org Chem., Vol. 2, pp. 293-301; KoIb, HC et al. 2003, Drug Discov. Today, vol. 8, pp. 1128-1137; Bock, VD, et al. 2005, Eur. J. Org. Chem., Pp. 51-68; Lutz, JF 2007, Angew. Chem. Int. Ed. Vol. 46, pp. 1018-1023). In particular, the functionalization of supports based on silica gel (cf. Lummerstorfer, T. et al. 2004, J. Phys. Chem. B, vol. 108, pp. 3963-3966) and agarose (cf. Punna, S et al., 2005, Bioconjugate Chem., vol. 16, pp. 1536-1541) was performed using this methodology. EXPLANATION OF THE INVENTION
En Ia presente invención se proporciona un compuesto nuevo que comprende biotina unida a un soporte poroso mediante un grupo enlazante (ó "linker"). Además de proporcionar su método de obtención y sus usos.In the present invention there is provided a new compound comprising biotin linked to a porous support by means of a linker group (or "linker"). In addition to providing its method of obtaining and its uses.
Mediante el uso del compuesto de Ia invención se proporciona un sistema apropiado para:By using the compound of the invention an appropriate system is provided for:
o La purificación de avidina. Este sistema es más económico que usando iminobiotina; con facilidad de elución de Ia avidina unida; y con posibilidad de escalarlo en sistemas de microfiltros y centrifugación.o Purification of avidin. This system is cheaper than using iminobiotin; with ease of elution of bound avidin; and with the possibility of scaling it in microfilter and centrifugation systems.
o El mareaje fluorescente en columna de avidina con las siguientes ventajas: facilidad operatoria del mareaje; y posibilidad de realizar el mareaje sin afectar a uno de los sitios de unión de Ia avidina a Ia biotina que permanece protegido por Ia unión al soporte poroso a través de Ia biotina.o Fluorescent avidin column marking with the following advantages: ease of operation of the marking; and possibility of performing the marking without affecting one of the binding sites of the avidin to the biotin that remains protected by the binding to the porous support through the biotin.
o La purificación de proteínas biotiniladas in vitro y en general ligandos biotinilados. En función del pH de elución empleado es posible seleccionar específicamente Ia unión biotina-avidina a liberar: Ia unión con Ia biotina soportada o Ia unión con Ia biotina del ligando. Además, los ligandos purificados pueden ser fácilmente caracterizados por espectrometría MALDI-TOF.o Purification of biotinylated proteins in vitro and in general biotinylated ligands. Depending on the elution pH used, it is possible to select specifically the biotin-avidin binding to be released: the binding with the supported biotin or the binding with the biotin of the ligand. In addition, purified ligands can be easily characterized by MALDI-TOF spectrometry.
Un primer aspecto de Ia presente invención se refiere al compuesto, en adelante compuesto de Ia invención, que comprende: a. biotina o cualquiera de sus derivados de fórmula general (I); b. un "linker" o enlazante que comprende un grupo triazol, más concretamente un grupo 1 ,2,3- triazol; y c. un soporte poroso. A first aspect of the present invention refers to the compound, hereinafter compound of the invention, which comprises: a. biotin or any of its derivatives of general formula (I); b. a "linker" or linker comprising a triazole group, more specifically a 1,3,3-triazole group; and c. a porous support.
Figure imgf000007_0001
Figure imgf000007_0001
(I) donde: X es S ó SO2, preferiblemente X es S; Y es O ó NH, preferiblemente Y es O;(I) where: X is S or SO 2 , preferably X is S; Y is O or NH, preferably Y is O;
Z es CH2 ó CH3 cuando X no existe; preferiblemente Z es CH2. R1es O ó NH, preferiblemente R1 es NH; yZ is CH 2 or CH 3 when X does not exist; preferably Z is CH 2 . R 1 is O or NH, preferably R 1 is NH; Y
R2 es un grupo seleccionado de entre un alquilo (C1-C10); (CH2CH2O)nCH2, donde n tiene un valor de 0 a 10; ó un (CH2)4CH(NH2)COOCH2. Preferiblemente R2 es un metileno.R 2 is a group selected from a (C1-C10) alkyl; (CH 2 CH 2 O) n CH 2 , where n has a value from 0 to 10; or a (CH 2 ) 4 CH (NH 2 ) COOCH 2 . Preferably R 2 is a methylene.
El símbolo "1^ indica el punto de unión de Ia biotina o cualquiera de sus derivados con el "linker".The symbol "1 ^ indicates the point of union of the biotin or any of its derivatives with the" linker ".
Entendemos por "derivados de biotina" a los compuestos que tienen una estructura análoga a Ia biotina y cuya función biológica es similar, como por ejemplo biocitina, iminobitina, destiobitina, etc..By "biotin derivatives" we mean compounds that have a structure analogous to biotin and whose biological function is similar, such as biocitin, iminobitin, destiobitin, etc.
En una realización preferida del compuesto de Ia presente invención, el "linker" tiene Ia estructura que se representa por las fórmulas generales (II) ó (III):In a preferred embodiment of the compound of the present invention, the "linker" has the structure that is represented by the general formulas (II) or (III):
Figure imgf000007_0002
Figure imgf000007_0002
(H)
Figure imgf000008_0001
donde:
(H)
Figure imgf000008_0001
where:
R3 es un grupo seleccionado de entre un alquilo (C1-C10); óR 3 is a group selected from a (C1-C10) alkyl; or
((CCHH22CCHH22OOy)nCH2, donde n tiene un valor de 0 a 10 . Preferiblemente R3 es un metileno.((CCHH 22 CCHH 22 OOy) n CH 2 , where n has a value of 0 to 10. Preferably R 3 is a methylene.
R4 se selecciona del grupo que comprende O, C(O)R1, R1C(O)R1 ó R1C(S)R1 (donde R1 es O ó NH); yR 4 is selected from the group comprising O, C (O) R 1 , R 1 C (O) R 1 or R 1 C (S) R 1 (where R 1 is O or NH); Y
m tiene el valor de 1 a 11. Preferiblemente m es 1 , 2 ó 3.m has the value from 1 to 11. Preferably m is 1, 2 or 3.
El símbolo ^ indica, en estas estructuras, el punto de unión del "linker" con Ia biotina o cualquiera de sus derivados.The symbol ^ indicates, in these structures, the point of attachment of the "linker" with the biotin or any of its derivatives.
Por "alquilo" se refiere en Ia presente invención a cadenas alifáticas, lineales o ramificadas, que tienen de 1 a 10 átomos de carbonos, por ejemplo, metilo, etilo, n-propilo, i-propilo, n-butilo, t-butilo, n-pentilo, etc.By "alkyl" refers in the present invention to aliphatic, linear or branched chains, having 1 to 10 carbon atoms, for example, methyl, ethyl, n-propyl, i-propyl, n-butyl, t-butyl , n-pentyl, etc.
Dependiendo de Ia estructura del "linker", los compuestos de Ia invención estarán representados por las siguientes fórmulas generales (IV) ó (V): Depending on the structure of the "linker", the compounds of the invention will be represented by the following general formulas (IV) or (V):
Figure imgf000009_0001
Figure imgf000009_0001
Como "soporte sólido poroso" entendemos aquí un soporte poroso inorgánico, como por ejemplo pero sin limitarse a sílice, alúmina, tierra silícea, zeolita, o un soporte poroso orgánico seleccionado del grupo que comprende celulosas ó resinas, como por ejemplo pero sin limitarse a poliamina ó resina de Merrifield. Preferiblemente el soporte es un material inorgánico, y más preferiblemente el soporte es sílice.As "porous solid support" we mean here an inorganic porous support, such as but not limited to silica, alumina, siliceous earth, zeolite, or an organic porous support selected from the group comprising celluloses or resins, as for example but not limited to polyamine or Merrifield resin. Preferably the support is an inorganic material, and more preferably the support is silica.
Una realización preferida de Ia invención comprende un compuesto de fórmula (Vl), denominado también en esta descripción, "biotina-silica":A preferred embodiment of the invention comprises a compound of formula (Vl), also referred to herein as "biotin-silica":
Figure imgf000009_0002
Figure imgf000009_0002
(Vl)(Vl)
Otro aspecto de Ia presente invención se refiere a un procedimiento de obtención de los compuestos de Ia invención, que comprende los siguientes pasos: a) funcionalización del soporte poroso usando un compuesto que comprende un grupo terminal azido (N3) ó alquino (C≡CH).Another aspect of the present invention relates to a process for obtaining the compounds of the invention, which comprises the following steps: a) functionalization of the porous support using a compound comprising an azido (N 3 ) or alkyne (C≡CH) terminal group.
b) funcionalización de biotina o cualquiera de sus derivados con un grupo terminal alquino (C≡CH) ó azido (N3);b) functionalization of biotin or any of its derivatives with an alkyne (C≡CH) or azido (N 3 ) terminal group;
c) reacción del soporte funcionalizado del paso (a) con Ia biotina o cualquiera de sus derivados funcionalizados complementariamente del paso (b) por reacción de cicloadición 1 ,3-dipolar ("click-chemistry").c) reaction of the functionalized support of step (a) with biotin or any of its functionalized derivatives complementary to step (b) by reaction of 1, 3-dipolar cycloaddition ("click-chemistry").
Este procedimiento se puede describir mediante los siguientes esquema de reacción, donde el compuesto (VII) y (VIII) serían los compuesto derivados de biotina obtenido en el paso (b) y el compuesto (IX) y (X) sería el soporte poroso funcionalizado con un grupo azido o alquino obtenido en el paso (a) dando lugar al compuesto de fórmula general (IV) o (V), obtenido en el paso (c), que comprende biotina, o cualquiera de sus derivados, unida a un soporte poroso mediante un "linker" (grupo de unión) que comprende el grupo 1 ,2,3-triazol:This procedure can be described by the following reaction scheme, where the compound (VII) and (VIII) would be the biotin derived compounds obtained in step (b) and the compound (IX) and (X) would be the functionalized porous support with an azido or alkyne group obtained in step (a) giving rise to the compound of general formula (IV) or (V), obtained in step (c), comprising biotin, or any of its derivatives, attached to a support porous by means of a "linker" (binding group) comprising the group 1, 2,3-triazole:
Figure imgf000010_0001
Figure imgf000011_0001
donde X, Y, Z R1, R2, R3, R4 y m están descritos anteriormente.
Figure imgf000010_0001
Figure imgf000011_0001
where X, Y, ZR 1 , R 2 , R 3 , R 4 and m are described above.
La reacción que se produce entre los grupos alquino y azido para dar anillos de 1 ,2,3- triazoles es una cicloadición 1 ,3-dipolar que, para el caso particular de estos grupos funcionales, es conocida en el estado de Ia técnica como reacción de "click-chemistry".The reaction that occurs between the alkyne and azido groups to give rings of 1,3,3-triazoles is a 1,3-dipolar cycloaddition which, for the particular case of these functional groups, is known in the state of the art as "click-chemistry" reaction.
La reacción de Ia presente invención se puede llevar a cabo mediante las mismas condiciones que otras reacciones de "click-chemistry" descritas en el estado de Ia técnica, temperatura, tiempo de reacción, etc. incluyendo el uso de catalizadores ya descritos. En una realización preferida de Ia presente invención, el catalizador utilizado en el procedimiento de obtención del compuesto (I) o (II) es el complejo (EtO )3P. Cu(I) (Et=etilo).The reaction of the present invention can be carried out by means of the same conditions as other click-chemistry reactions described in the state of the art, temperature, reaction time, etc. including the use of catalysts already described. In a preferred embodiment of the present invention, the catalyst used in the process for obtaining compound (I) or (II) is the 3P complex (EtO). Cu (I) (Et = ethyl).
En una realización preferida de Ia invención, Ia reacción de cicloadición se produce entre un grupo azido del soporte poroso funcionalizado y un grupo alquino de Ia biotina funcionalizada.In a preferred embodiment of the invention, the cycloaddition reaction occurs between an azido group of the functionalized porous support and an alkyne group of the functionalized biotin.
Otro aspecto de Ia presente invención se refiere al uso de los compuestos de Ia invención para Ia purificación de avidina.Another aspect of the present invention relates to the use of the compounds of the invention for the purification of avidin.
Otro aspecto de Ia presente invención se refiere al uso de los compuestos descritos en Ia presente invención para Ia inmovilización de avidina.Another aspect of the present invention relates to the use of the compounds described in the present invention for the immobilization of avidin.
Al inmovilizarse Ia avidina en el compuesto de Ia invención se forma un complejo que posteriormente se puede utilizar para Ia purificación de ligandos biotinados o para el mareaje de avidina.Upon immobilization of the avidin in the compound of the invention, a complex is formed which can subsequently be used for the purification of biotinylated ligands or for the avidin labeling.
Por Io tanto, otro aspecto de Ia presente invención se refiere a este complejo avidina-compuesto de Ia invención.Therefore, another aspect of the present invention relates to this avidin-compound complex of the invention.
La purificación de ligandos biotinilados es una de las principales aplicaciones que se persigue con el uso de esta tecnología basada en Ia interacción de Ia avidina con Ia biotina, que es Ia identificación y aislamiento de proteínas biotiniladas in vitro. Con el actual desarrollo de Ia proteómica, Ia capacidad de identificación y purificación de las proteínas así modificadas, utilizando unas condiciones suaves que permitan su posterior análisis mediante electroforesis bidimensional y espectrometría de masas, es una necesidad acuciante.The purification of biotinylated ligands is one of the main applications pursued with the use of this technology based on the interaction of avidin with biotin, which is the identification and isolation of biotinylated proteins in vitro. With the current development of proteomics, the ability to identify and purify the proteins thus modified, using mild conditions that allow their subsequent analysis by two-dimensional electrophoresis and mass spectrometry, is a pressing need.
La purificación de avidina y/o de los ligandos biotinilados usando el complejo avidina-compuesto de Ia invención se puede llevar a cabo mediante Ia adecuada selección del pH. Así por ejemplo, el complejo avidina-ligando biotinilado puede eluir a pH < 2.5, mientras que a pH 4 eluye sólo el ligando biotinilado.The purification of avidin and / or biotinylated ligands using the avidin-compound complex of the invention can be carried out by means of adequate pH selection. Thus, for example, the biotinylated avidin-ligand complex can elute at pH <2.5, while at pH 4 it elutes only the biotinylated ligand.
Otro aspecto más de Ia presente invención se refiere al uso del compuesto de Ia invención para el mareaje fluorescente de avidina una vez que esta ha sido previamente inmovilizada al mencionado compuesto de Ia invención. Esta operatoria permite Ia salvaguarda en el mareaje del centro activo de Ia avidina a través del cual Ia avidina se ha unido al compuesto de Ia invención manteniéndose de esta forma su funcionalidad una vez que sea eluido del soporte.A further aspect of the present invention refers to the use of the compound of the invention for fluorescent avidin marking once it has been previously immobilized to said compound of the invention. This operation allows the safeguarding of the active center of the avidin through which the avidin has been bound to the compound of the invention, thus maintaining its functionality once it is eluted from the support.
A Io largo de Ia descripción y las reivindicaciones Ia palabra "comprende" y sus variantes no pretenden excluir otras características técnicas, aditivos, componentes o pasos. Para los expertos en Ia materia, otros objetos, ventajas y características de Ia invención se desprenderán en parte de Ia descripción y en parte de Ia práctica de Ia invención. Los siguientes ejemplos y dibujos se proporcionan a modo de ilustración, y no se pretende que sean limitativos de Ia presente invención.Throughout the description and the claims, the word "comprises" and its variants are not intended to exclude other technical characteristics, additives, components or steps. For experts in the field, other objects, advantages and characteristics of the invention will be derived partly from the description and partly from the practice of the invention. The following examples and drawings are provided by way of illustration, and are not intended to be limiting of the present invention.
BREVE DESCRIPCIÓN DE LAS FIGURASBRIEF DESCRIPTION OF THE FIGURES
FIG. 1.- Muestra Ia cromatografía de afinidad de Ia avidina utilizando el compuesto de fórmula (Vl) (también llamado biotina-silica). A.- Cromatograma de Ia purificación de avidina a partir de un extracto crudo de huevo B.- Electroforesis en SDS-PAGE de las fracciones cargadas y eluidas en Ia columna.FIG. 1.- Shows the affinity chromatography of the avidin using the compound of formula (Vl) (also called biotin-silica). A.- Chromatogram of the purification of avidin from a raw egg extract B.- Electrophoresis in SDS-PAGE of the fractions charged and eluted in the column.
FIG. 2.- Muestra un gel de SDS-PAGE de las fracciones eluidas para el compuesto biotina-silica.FIG. 2.- Shows an SDS-PAGE gel of the eluted fractions for the biotin-silica compound.
FIG. 3.- Muestra el mareaje de avidina con el compuesto 7(2-hidroxietoxi)- 4-nitro-2,1 ,3-benzooxadiazol (NBD-OCH2CH2OH). A.- Cromatograma de Ia elución del compuesto biotina-silica. B.- Electroforesis en SDS-PAGE de las fracciones eluidas. Donde "L" corresponde al lavado de Ia columna previa a Ia elución. C- Espectro de emisión de fracciones correspondientes al lavado y los dos picos eluidos. La excitación se ha realizado a 460 nm.FIG. 3.- Shows the avidin mapping with compound 7 (2-hydroxyethoxy) -4-nitro-2,1,3-benzooxadiazole (NBD-OCH 2 CH 2 OH). A.- Chromatogram of the elution of the biotin-silica compound. B.- SDS-PAGE electrophoresis of the eluted fractions. Where "L" corresponds to the washing of the column prior to elution. C- Spectrum emission of fractions corresponding to the wash and the two eluted peaks. The excitation was carried out at 460 nm.
FIG. 4.- Muestra Ia purificación de peroxidasa de rábano picante biotinilada in vitro A.- Cromatograma de Ia elución en Ia resina. La absorbancia a 440 nm es un índice de Ia actividad enzimático de Ia POD eluida. B.- Electroforesis en SDS-PAGE de las fracciones eluidas. Se ha incluido POD y avidina como estándares de Ia electroforesis.FIG. 4.- Shows the purification of biotinylated horseradish peroxidase in vitro A.- Chromatogram of the elution in the resin. The absorbance at 440 nm is an index of the enzymatic activity of the eluted POD. B.- SDS-PAGE electrophoresis of the eluted fractions. POD and avidin have been included as electrophoresis standards.
EXPOSICIÓN DETALLADA DE MODOS DE REALIZACIÓNDETAILED EXHIBITION OF REALIZATION MODES
A continuación se ilustrará Ia invención mediante unos ensayos realizados por los inventores, que pone de manifiesto Ia especificidad y efectividad de los compuestos de Ia invención. EJEMPLO 1.- Preparación del compuesto biotina-silicaNext, the invention will be illustrated by tests carried out by the inventors, which shows the specificity and effectiveness of the compounds of the invention. EXAMPLE 1.- Preparation of the biotin-silica compound
La síntesis de biotina-silica se llevó a cabo en varios pasos:The synthesis of biotin-silica was carried out in several steps:
a) Preparación de 3-azidopropil-trietoxisilano (Xl).a) Preparation of 3-azidopropyl-triethoxysilane (Xl).
A una solución de 3-cloropropil-trietoxisilano (2.31 g, 9.6 mmol) y yoduro de tetrabutilamonio (0.02 g, 0.05 mmol) en butanona (25 ml_) se Ie añadió azida sódica (3.120 g, 48 mmol) y se calentó Ia mezcla de reacción a reflujo durante 50 horas. Pasado este tiempo, se filtró sobre celita y se evaporó el disolvente a vacío. El crudo de reacción se disolvió en diclorometano (150 ml_) y se lavó con agua (2 x 20 ml_). La capa orgánica se secó (Na2SO4) y se evaporó para dar el compuesto de fórmula (Xl) (1.9 g) como una sustancia siruposa que fue directamente usada sin otro proceso de purificación.To a solution of 3-chloropropyl-triethoxysilane (2.31 g, 9.6 mmol) and tetrabutylammonium iodide (0.02 g, 0.05 mmol) in butanone (25 ml_), sodium azide (3.120 g, 48 mmol) was added and the mixture was heated reaction at reflux for 50 hours. After this time, it was filtered over celite and the solvent was evaporated in vacuo. The reaction crude was dissolved in dichloromethane (150 ml_) and washed with water (2 x 20 ml_). The organic layer was dried (Na2SO 4 ) and evaporated to give the compound of formula (Xl) (1.9 g) as a sirupous substance that was directly used without another purification process.
Figure imgf000014_0001
Figure imgf000014_0001
(Xl)(Xl)
b) Preparación de azido-silica (XII): Se suspendió gel de sílice (4g) en tolueno (20 mL) y se añadió 3- azidopropil-trietoxisilano (Xl) (1 g). La mezcla de reacción se calentó a reflujo durante 2 h; se evaporó aproximadamente Ia mitad del volumen para eliminar el etanol formado, se añadió el volumen eliminado de tolueno y se calentó a reflujo durante 1 h. Se filtró Ia mezcla de reacción, se lavó con diclorometano (4 x 50 mL) y se secó a vacío (1 mm Hg) a 50 0C durante 16h.b) Preparation of azido-silica (XII): Silica gel (4g) was suspended in toluene (20 mL) and 3- azidopropyl-triethoxysilane (Xl) (1 g) was added. The reaction mixture was heated at reflux for 2 h; Approximately half of the volume was evaporated to remove the ethanol formed, the volume removed from toluene was added and heated at reflux for 1 h. It filtered the reaction mixture, washed with dichloromethane (4 x 50 mL) and dried under vacuum (1 mm Hg) at 50 0 C for 16h.
Figure imgf000014_0002
c) Preparación de propargilamida-biotina (5-[(4f?)-2-oxohexahldro-
Figure imgf000014_0002
c) Preparation of propargilamide-biotin (5 - [(4f?) - 2-oxohexahldro-
1/-/-tieno[3,4-d]imidazol-4-il]-Λ/-prop-2-inilpentanamida) (XIII).1 / - / - thieno [3,4-d] imidazol-4-yl] -Λ / -prop-2-inylpentanamide) (XIII).
Se disolvió biotina (370 mg) en cloruro de tionilo destilado (5 ml_) y se agitó durante 30 min. Se evaporó a vacío el cloruro de tionilo y se coevaporó con tolueno anhidro. El cloruro de ácido de biotina se disolvió en CI2CH2 anhidro (5 ml_) y se adicionó un exceso de propargil amina (207 μl_, 3 equiv.). La mezcla de reacción se agitó en atmósfera de argón durante 30 min. y pasado este tiempo se evaporó el disolvente y se purificó por cromatografía en columna (CI2CH2:Me0H, 9:1 ) obteniéndose un sólido blanco que corresponde a (XIII) (359 mg, 84%).Biotin (370 mg) was dissolved in distilled thionyl chloride (5 ml_) and stirred for 30 min. The thionyl chloride was evaporated in vacuo and coevaporated with anhydrous toluene. Biotin acid chloride was dissolved in anhydrous CI 2 CH 2 (5 ml_) and an excess of propargyl amine (207 μl_, 3 equiv.) Was added. The reaction mixture was stirred under argon for 30 min. and after this time the solvent was evaporated and purified by column chromatography (CI 2 CH 2 : Me0H, 9: 1) to obtain a white solid corresponding to (XIII) (359 mg, 84%).
Figure imgf000015_0001
Figure imgf000015_0001
"a" representa: i) CI2SO (5ml_), t. amb., 30 min ii) NH2CH2C≡CH, CH2CI2."a" represents: i) CI 2 SO (5ml_), t. amb., 30 min ii) NH 2 CH 2 C≡CH, CH 2 CI 2 .
d)Unión de propargilamida-biotina (XIII) a azido-silica (XIV). En una solución del alquino derivado de biotina (XIII) (300 mg, 1.06 mmol) en DMF seca (10 mL) se suspendió Ia azido-silica (XII) (3 g) y se añadió el catalizador (EtO^P CuI (10% en mmol, 37 mg). La reacción se irradió a 800W y 8O0C durante 1 h en un Milestone Star Microwave Labstation hasta que el espectro de IR o Ia cromatografía en placa fina mostraron Ia total desaparición de Ia biotina. Se filtró Ia biotina-sílica (Vl) resultante y se lavó con MeOH (2 x 30 mL), EDTA sal disódica (50 mM, 2 x 30 mL), agua (2 x 30 mL), acetona (2 x 30 mL) y CH2CI2 (2 x 30 mL). La biotina-sílica (Vl) se secó después a vacío (1 mm Hg) a 50 0C durante 16 h obteniéndose 3.240 g-d) Binding of propargilamide-biotin (XIII) to azido-silica (XIV). In a solution of the biotin-derived alkyne (XIII) (300 mg, 1.06 mmol) in dry DMF (10 mL), the azido-silica (XII) (3 g) was suspended and the catalyst (EtO ^ P CuI (10 % in mmol, 37 mg) The reaction was irradiated at 800W and 8O 0 C for 1 h in a Milestone Star Microwave Labstation until the IR spectrum or thin plate chromatography showed the total disappearance of the biotin. resulting biotin-silica (Vl) and washed with MeOH (2 x 30 mL), EDTA disodium salt (50 mM, 2 x 30 mL), water (2 x 30 mL), acetone (2 x 30 mL) and CH 2 CI 2 (2 x 30 mL). biotin-silica (Vl) is then dried in vacuo (1 mm Hg) at 50 0 C for 16 h yielding 3.240 g-
EJEMPLO 2.- Purificación de avidina de clara de huevo. Se ensayó Ia capacidad de unión de avidina a biotina-silica (Vl) a partir de muestras de clara de huevo. Para ello, se emplearon sistemas de cromatografía en columna así como sistemas de centrifugación rápida en microfiltros. Este último sistema permitió el manejo sencillo de numerosas muestras de pequeño volumen en un tiempo reducido ya que requiere pequeños tiempos de centrifugación de aproximadamente 30 segundos. En ambos casos, Ia avidina fue purificada a partir de clara de huevo previamente sonicada utilizando métodos ampliamente descrito previamente (Cf. Hofmann et al., 1980, Proc. Nati. Acad. Sci., vol. 77, pp. 4666-4668; Airenne et al., 1997, Protein expresión and purífication, vol. 9, pp. 100-108; Hytonen et al, 2003, Biochem. J., vol 372, pp. 219-225).EXAMPLE 2.- Purification of egg white avidin. The ability to bind avidin to biotin-silica (Vl) from egg white samples was tested. For this, column chromatography systems were used as well as rapid microfiltration centrifugation systems. This last system allowed the simple handling of numerous small volume samples in a reduced time since it requires small centrifugation times of approximately 30 seconds. In both cases, avidin was purified from egg white previously sonicated using methods previously described previously (Cf. Hofmann et al., 1980, Proc. Nati. Acad. Sci., Vol. 77, pp. 4666-4668; Airenne et al., 1997, Protein expression and purification, vol. 9, pp. 100-108; Hytonen et al, 2003, Biochem. J., vol 372, pp. 219-225).
En Ia FIG. 1 se muestran los resultados de una cromatografía de afinidad sobre una columna de biotina-silica (Vl). En dicha columna se cargó una muestra diluida 1 :1 de clara de huevo previamente sonicada a pH 11. Se realizó un lavado con un tampón a pH 11 y posteriormente dos eluciones secuenciales con un tampón carbonato a pH 4 y glicocola 0.1 M (pH = 2.5).In FIG. 1 shows the results of an affinity chromatography on a biotin-silica (Vl) column. A diluted 1: 1 sample of egg white previously sonicated at pH 11 was loaded on said column. A wash was performed with a buffer at pH 11 and subsequently two sequential elutions with a carbonate buffer at pH 4 and 0.1 M glycolol (pH = 2.5).
Se monitorizó el pH así como Ia absorbancia a 280 nm y se realizó una electroforesis en SDS-PAGE al 15% de las fracciones eluidas. Durante todo el proceso Ia temperatura se mantuvo a 4 0C. Pudo observarse que Ia columna retiene de forma eficiente un elevado porcentaje del contenido de avidina del extracto crudo, que posteriormente fue eluido de una forma casi cuantitativa a pH 2.5. Por el contrario, Ia elución a pH 4 no fue capaz de romper Ia unión de Ia avidina a Ia matriz. El rendimiento aproximado del proceso es de 0.1 mg de avidina por gramo de resina.The pH was monitored as well as the absorbance at 280 nm and an electrophoresis was performed in 15% SDS-PAGE of the eluted fractions. During the whole process the temperature was maintained at 4 0 C. It could be observed that the column efficiently retains a high percentage of the avidin content of the crude extract, which was subsequently eluted almost quantitatively at pH 2.5. On the contrary, elution at pH 4 was not able to break the binding of avidin to the matrix. The approximate yield of the process is 0.1 mg of avidin per gram of resin.
En otros experimentos se utilizaron 200 mg de silica funcionalizada que fueron incubados a 40C durante una hora con un ml_ de extracto crudo de huevo a pH 11. Posteriormente Ia suspensión de resina y extracto crudo se dispuso en un microfiltro y se centrifugó durante 30 segundos. La resina se lavó con tampón a pH 11 y posteriormente se eluyó con tampones conteniendo biotina (10 mM) de pH 4 y de pH 2.5. Una electroforesis en SDS-PAGE de las fracciones eluidas se muestra en Ia FIG. 2. Pudo observarse como utilizando esta técnica es posible unir avidina a Ia columna que es eluida específicamente a pH 2.5.In other experiments 200 mg of functionalized silica which were incubated at 4 0 C for one hour with ml_ crude extract from egg to pH 11. Subsequently the suspension resin and crude extract used was placed in a microfilter and centrifuged for 30 seconds. The resin was washed with buffer at pH 11 and subsequently eluted with buffers containing biotin (10 mM) of pH 4 and pH 2.5. An SDS-PAGE electrophoresis of the eluted fractions is shown in FIG. 2. Could Observe how using this technique it is possible to bind avidin to the column that is specifically eluted at pH 2.5.
Los datos obtenidos indican que con Ia biotina-silica (Vl) se obtiene un resultado inesperado y con una alta aplicabilidad: Ia elución de Ia avidina unida a Ia columna en condiciones relativamente suaves, evitando el uso de agentes caotrópicos o detergentes,. Esto permite el desarrollo de columnas de biotina basadas en esta matriz en lugar de las clásicas columnas de iminobiotina Io que se traduce en una considerable reducción del coste de esta tecnología. Adicionalmente, cabe señalarse que de los resultados de Ia electroforesis de las fracciones purificadas se obtuvo un elevado grado de pureza (>96% medido mediante electroforesis de proteínas), Io que permite realizar Ia purificación en un único paso.The data obtained indicate that with the biotin-silica (Vl) an unexpected result is obtained and with a high applicability: the elution of the avidin bound to the column under relatively mild conditions, avoiding the use of chaotropic agents or detergents. This allows the development of biotin columns based on this matrix instead of the classic iminobiotin columns, which translates into a considerable reduction in the cost of this technology. Additionally, it should be noted that the results of the electrophoresis of the purified fractions obtained a high degree of purity (> 96% measured by protein electrophoresis), which allows purification in a single step.
Además, de forma alternativa Ia avidina puede ser cargada a pH 7.5 e igualmente Ia avidina puede ser eluida en una solución 0.2 N de HCI que posteriormente puede ser neutralizada utilizando tampones volátiles (por ejemplo tampón carbonato/bicarbonato) Io que permite obtener Ia proteína en condiciones de fuerza iónica muy baja.In addition, alternatively, the avidin can be charged at pH 7.5 and likewise the avidin can be eluted in a 0.2 N HCI solution that can subsequently be neutralized using volatile buffers (for example carbonate / bicarbonate buffer) which allows obtaining the protein in Very low ionic strength conditions.
EJEMPLO 3.- Mareaje fluorescente de avidina de clara de huevo unida a Ia resina biotina-silica (Vl).EXAMPLE 3.- Fluorescent dyeing of egg white avidin bound to biotin-silica resin (Vl).
Puesto que Ia resina biotina-silica permitió Ia purificación de avidina en condiciones relativamente suaves, se procedió a ensayar el mareaje en columna de Ia avidina unida a Ia resina con un fluoróforo. Para ello se utilizó el compuesto 7(2-hidroxietoxi)-4-nitro-2,1 ,3-benzooxadiazol (NBD- OCH2CH2OH.Since the biotin-silica resin allowed the purification of avidin under relatively mild conditions, the column-based dyeing of the avidin bound to the resin was proceeded with a fluorophore. To do this, compound 7 (2-hydroxyethoxy) -4-nitro-2,1,3-benzooxadiazole (NBD-OCH 2 CH 2 OH) was used.
Para el mareaje de Ia avidina se utilizó Ia resina biotina-silica (2 g) que se incubaron con 15 ml_ de un extracto crudo de huevo sonicado y diluido 1 :1. El pH se fijó a 11 y tras una hora de incubación, Ia suspensión de Ia resina se compactó en una columna. Tras lavarla se adicionaron 2 ml_ de una solución 2 mM de NBD-OCH2CH2OH a pH 11 (en todos los casos esta solución de lavado a pH 11 está formada por 50 mM Na2CO3, 1 M NaCI pH 11 ) y Ia solución se recirculó durante 16 h a través de Ia resina a temperatura ambiente. Seguidamente se lavó Ia columna con tampón a pH 11 y Ia avidina unida se eluyó con una solución 0.2 N de HCI. Los resultados obtenidos se muestran en Ia FIG. 3 y demuestran que es posible realizar el mareaje de Ia avidina unida a Ia biotina-silica con el mencionado reactivo NBD-OCH2CH2OH. El mareaje de Ia avidina con este reactivo hizo que Ia elución de Ia columna a pH 1 fuera más rápida originando dos picos. Un primer pico de elución con una mayor relación fluorescencia proteína y un segundo pico con una relación de mareaje inferior y mayor retención en Ia columna. Esta relación de mareaje fue confirmada mediante MALDI-TOF. Una prueba adicional de mareaje se obtuvo observando el espectro de fluorescencia de Ia avidina marcada y comparándolo al del compuesto libre. Como se esperaba se produjo un ligero desplazamiento del máximo de emisión que fue debido a Ia unión a Ia proteína.For the avidin mapping, the biotin-silica resin (2 g) was used, which was incubated with 15 ml_ of a raw sonicized egg extract diluted 1: 1. The pH was set at 11 and after one hour of incubation, the suspension of the resin was compacted in a column. After washing, 2 ml_ of a 2 mM solution of NBD-OCH 2 CH 2 OH at pH 11 were added (in all cases this washing solution at pH 11 is formed by 50 mM Na 2 CO 3 , 1 M NaCI pH 11) and the solution was recirculated for 16 hours through the resin at room temperature. The column was then washed with buffer at pH 11 and the bound avidin was eluted with a 0.2 N solution of HCI. The results obtained are shown in FIG. 3 and demonstrate that it is possible to perform the avidin-linked biotin-silica binding with said reagent NBD-OCH2CH2OH. The avidin mareaje with this reagent made the elution of the column at pH 1 was faster causing two peaks. A first elution peak with a higher protein fluorescence ratio and a second peak with a lower tidal ratio and greater retention in the column. This tide ratio was confirmed by MALDI-TOF. An additional screening test was obtained by observing the fluorescence spectrum of the labeled avidin and comparing it to that of the free compound. As expected, there was a slight shift in the maximum emission that was due to protein binding.
EJEMPLO 4.- Purificación de proteínas biotiniladas in vitro mediante avidina unida a Ia resina biotina-silica (Vl).EXAMPLE 4.- Purification of biotinylated proteins in vitro by avidin bound to the biotin-silica resin (Vl).
Para valorar Ia capacidad de Ia resina biotina-silica para Ia purificación y caracterización de proteínas biotiniladas in vitro se realizaron dos experimentos.To evaluate the capacity of the biotin-silica resin for the purification and characterization of biotinylated proteins in vitro, two experiments were performed.
1o Se marcó con biotina una proteína fluorescente verde (Green Fluorescent Protein, GFP) utilizando el succinil éster del ácido 6-biotinil hexanóico. Posteriormente, se purificó mediante su unión a avidina que había sido previamente inmovilizada sobre Ia biotina-silica utilizando para ello el sistema de microfiltro con sólo 100 mg de resina silica-biotina. La elución se realizó con HCI 0.2 N y el eluato, tras ser liofilizado se analizó mediante MALDI-TOF. Se observaron pesos moleculares correspondientes con el monómero de avidina, así como con el de una molécula de GFP modificada con 4 biotinas. Se demostró, así, que esta técnica es idónea para Ia purificación y caracterización de proteínas biotiniladas. 2° Se procedió a marcar peroxidasa de rábano picante con el succinil éster del ácido 6-biotinil hexanoico. La peroxidasa marcada fue separada del agente biotinilante mediante cromatografía sobre sephadex G-50 y se empleó posteriormente para comprobar Ia capacidad de inmovilización sobre Ia resina biotina-silica. Esta resina, previamente cargada con avidina, fue eluida después de Ia unión de Ia biotina-peroxidasa a pH 4 y pH 2. La elución de Ia peroxidasa unida a Ia columna se monitorizó enzimáticamente usando el reactivo de Trinder. Los resultados obtenidos se muestran en Ia FIG. 4. Pudo observarse que Ia peroxidasa biotinilada fue reconocida por Ia avidina unida a Ia columna y puede ser eluida de una manera selectiva a pH 4 (Ia elución de Ia peroxidasa precede una fracción al cambio del pH en Ia cromatografía). Esta elución se produjo sin liberar Ia avidina unida a Ia columna (véase Ia electroforesis en SDS-PAGE fracción 5) que sólo se eluye a pH 2 (Fracción 11 en Ia electroforesis en SDS-PAGE).1 o A green fluorescent protein (GFP) was labeled with biotin using the succinyl ester of 6-biotinyl hexanoic acid. Subsequently, it was purified by binding to avidin that had previously been immobilized on the biotin-silica using the microfilter system with only 100 mg of silica-biotin resin. Elution was performed with 0.2 N HCI and the eluate, after being lyophilized, analyzed by MALDI-TOF. Corresponding molecular weights were observed with the avidin monomer, as well as that of a GFP molecule modified with 4 biotins. Thus, it was demonstrated that this technique is suitable for the purification and characterization of biotinylated proteins. 2nd The horseradish peroxidase was labeled with the succinyl ester of 6-biotinyl hexanoic acid. The labeled peroxidase was separated from the biotinylating agent by chromatography on sephadex G-50 and was subsequently used to check the immobilization capacity on the biotin-silica resin. This resin, previously loaded with avidin, was eluted after the binding of biotin-peroxidase at pH 4 and pH 2. Elution of the peroxidase bound to the column was monitored enzymatically using the Trinder reagent. The results obtained are shown in FIG. 4. It could be observed that the biotinylated peroxidase was recognized by the avidin attached to the column and can be eluted in a selective manner at pH 4 (the elution of the peroxidase precedes a fraction to the change of the pH in the chromatography). This elution was produced without releasing the avidin bound to the column (see the electrophoresis in SDS-PAGE fraction 5) that is only eluted at pH 2 (Fraction 11 in the electrophoresis in SDS-PAGE).
Por tanto, este sistema tiene Ia ventaja de permitir Ia elución del complejo avidina-ligando biotinilado si se escoge como sistema de elución un tampón HCI a pH 1-2.5 o bien Ia elución específica del ligando biotinilado si se escoge como sistema de elución un tampón a pH 4. Therefore, this system has the advantage of allowing the elution of the avidin-biotinylated ligand complex if an HCI buffer at pH 1-2.5 is chosen as the elution system or the specific elution of the biotinylated ligand if an elution system is chosen as a buffer system at pH 4.

Claims

REIVINDICACIONES
1. Compuesto que comprende: a. biotina o cualquiera de sus derivados de fórmula general (I); b. un "linker" o enlazante que comprende el grupo 1 ,2,3-triazol; y c. un soporte poroso.1. Compound comprising: a. biotin or any of its derivatives of general formula (I); b. a "linker" or linker comprising the group 1,3,3-triazole; and c. a porous support.
Figure imgf000020_0001
(I) donde:
Figure imgf000020_0001
(I where:
X es S, el grupo SO2 Ó no existe;X is S, the group SO 2 Ó does not exist;
Y es O ó NH;Y is O or NH;
Z es CH2 ó CH3 cuando X no existe. R1es 0 ó NH; yZ is CH 2 or CH 3 when X does not exist. R 1 is 0 or NH; Y
R2 es un grupo seleccionado de entre un alquilo C1-C10, (CH2CH2O)nCH2, donde n tiene un valor de 0 a 10, ó (CH2)4CH(NH2)COOCH2.R 2 is a group selected from a C 1 -C 1 0 alkyl, (CH 2 CH 2 O) n CH 2 , where n has a value of 0 to 10, or (CH 2 ) 4 CH (NH 2 ) COOCH 2 .
2. Compuesto según Ia reivindicación 1 , donde X es S.2. Compound according to claim 1, wherein X is S.
3. Compuesto según cualquiera de las reivindicaciones 1 ó 2, donde Y es O.3. Compound according to any of claims 1 or 2, wherein Y is O.
4. Compuesto según cualquiera de las reivindicaciones 1 a 3, donde R1 es NH.4. Compound according to any of claims 1 to 3, wherein R 1 is NH.
5. Compuesto según cualquiera de las reivindicaciones 1 a 4, donde R2 es CH2. 5. Compound according to any of claims 1 to 4, wherein R 2 is CH 2 .
6. Compuesto según cualquiera de las reivindicaciones 1 a 5, donde el enlazante tiene Ia fórmula general (II) ó (III):6. Compound according to any of claims 1 to 5, wherein the binder has the general formula (II) or (III):
i
Figure imgf000021_0001
i
Figure imgf000021_0001
(H)(H)
Figure imgf000021_0002
Figure imgf000021_0002
donde:where:
R3 es un alquilo C1-C10 ó un grupo seleccionado de entre (CH2CH2O)nCH2, donde n tiene un valor de 0 a 10, ó (CH2)4CH(NH2)COOCH2;R 3 is a C 1 -C 10 alkyl or a group selected from (CH 2 CH 2 O) n CH 2 , where n has a value of 0 to 10, or (CH 2 ) 4 CH (NH 2 ) COOCH 2 ;
R4 se selecciona del grupo que comprende O, C(O)R1, R1C(O)R1 oR 4 is selected from the group comprising O, C (O) R 1 , R 1 C (O) R 1 or
R1C(S)R1 (donde R1 es O ó NH); y m tiene el valor de 1 a 11.R 1 C (S) R 1 (where R 1 is O or NH); and m has the value from 1 to 11.
7. Compuesto según Ia reivindicación 6, donde m tiene el valor de 1 a 3.7. Compound according to claim 6, wherein m has the value of 1 to 3.
8. Compuesto según cualquiera de las reivindicaciones 6 ó 7, donde R3 es CH2.8. Compound according to any of claims 6 or 7, wherein R 3 is CH 2 .
9. Compuesto según cualquiera de las reivindicaciones 1 a 8, donde el soporte poroso es sílice.9. Compound according to any of claims 1 to 8, wherein the porous support is silica.
10. Compuesto según cualquiera de las reivindicaciones 1 a 9, de fórmula (Vl): 10. Compound according to any of claims 1 to 9, of formula (Vl):
Figure imgf000022_0001
Figure imgf000022_0001
(Vl)(Vl)
11. Procedimiento de obtención de un compuesto descrito en cualquiera de las reivindicaciones 1 a 10, que comprende los siguientes pasos:11. Method of obtaining a compound described in any one of claims 1 to 10, comprising the following steps:
a) funcionalización del soporte poroso usando un compuesto que comprende un grupo terminal azido (N3) ó alquino (C≡CH).a) functionalization of the porous support using a compound comprising an azido (N3) or alkyne (C≡CH) terminal group.
b) funcionalización de biotina o cualquiera de sus derivados con un grupo terminal alquino (C≡CH) ó azido (N3);b) functionalization of biotin or any of its derivatives with an alkyne (C≡CH) or azido (N3) terminal group;
c) reacción del soporte funcionalizado del paso (a) con Ia biotina funcionalizada o cualquiera de sus derivados funcionalizados del paso (b) por reacción de cicloadición 1 ,3-dipolar ("click- chemistry").c) reaction of the functionalized support of step (a) with the functionalized biotin or any of its functionalized derivatives of step (b) by reaction of 1, 3-dipolar cycloaddition ("click-chemistry").
12. Procedimiento según Ia reivindicación 11 , donde Ia reacción de cicloadicción se produce entre un grupo azido del soporte poroso funcionalizado y un grupo alquino de Ia biotina funcionalizada.12. Method according to claim 11, wherein the cycloadiction reaction occurs between an azido group of the functionalized porous support and an alkyne group of the functionalized biotin.
13. Uso de un compuesto descrito en cualquiera de las reivindicaciones 1 a 10, para Ia purificación de avidina.13. Use of a compound described in any of claims 1 to 10, for the purification of avidin.
14. Uso de un compuesto descrito en cualquiera de las reivindicaciones 1 a 10, para Ia inmovilización de avidina.14. Use of a compound described in any of claims 1 to 10, for the immobilization of avidin.
15. Complejo que comprende un compuesto descrito en cualquiera de las reivindicaciones 1 a 10 y avidina. 15. A complex comprising a compound described in any one of claims 1 to 10 and avidin.
16. Uso del complejo descrito en Ia reivindicación 15, para Ia purificación de ligandos biotinilados.16. Use of the complex described in claim 15, for the purification of biotinylated ligands.
17. Uso del complejo descrito en Ia reivindicación 15, para el mareaje fluorescente de avidina. 17. Use of the complex described in claim 15, for fluorescent avidin marking.
PCT/ES2008/070105 2007-07-02 2008-05-29 Porous biotin carrier, and associated production methods and uses WO2009004106A1 (en)

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WO2013144604A1 (en) * 2012-03-27 2013-10-03 The University Court Of The University Of Edinburgh Biotinidase resistant biotinyl compounds

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ORTEGA-MUNOZ M. ET AL.: "Synthesis of glyco-silicas by Cu(I)-catalyzed "click-chemistry" and their applications in affinity chromatography", ADVANCED SYNTHESIS & CATALYSIS, vol. 348, no. 16+17, 2006, pages 2410 - 2420 *
ROZKIEWICZ D.I. ET AL.: ""Click" chemistry by microcontact", ANGEWANDTE CHEMIE, INTERNATIONAL EDITION, vol. 45, no. 32, 2006, pages 5292 - 5296 *
SMITH C.L. ET AL.: "Immobilization of nucleic acids usind biotin-stept (avidin) systems", TOPICS IN CURRENT CHEMISTRY, vol. 261, pages 63 - 90 *
ZHAO X.Z. ET AL.: "Biotinylated biphenyl ketone-containing 2,4-dioxobutanoic acids designed as HIV-1 integrase photoaffinity ligands", BIOORGANIC & MEDICINAL CHEMISTRY, vol. 14, no. 23, 2006, pages 7816 - 7825, XP005715168 *

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* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2013144604A1 (en) * 2012-03-27 2013-10-03 The University Court Of The University Of Edinburgh Biotinidase resistant biotinyl compounds

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