WO2008132469A1 - Estimation of a measure of contrast agent concentration using an analytical mathematical model - Google Patents

Estimation of a measure of contrast agent concentration using an analytical mathematical model Download PDF

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Publication number
WO2008132469A1
WO2008132469A1 PCT/GB2008/001476 GB2008001476W WO2008132469A1 WO 2008132469 A1 WO2008132469 A1 WO 2008132469A1 GB 2008001476 W GB2008001476 W GB 2008001476W WO 2008132469 A1 WO2008132469 A1 WO 2008132469A1
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Prior art keywords
function
parameters
concentration
contrast
sequence
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PCT/GB2008/001476
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French (fr)
Inventor
Martin Osmund Leach
Matthew Richard Orton
James D'arcy
David Collins
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The Institute Of Cancer Research: Royal Cancer Hospital
The Royal Marsden Nhs Foundation Trust
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Application filed by The Institute Of Cancer Research: Royal Cancer Hospital, The Royal Marsden Nhs Foundation Trust filed Critical The Institute Of Cancer Research: Royal Cancer Hospital
Publication of WO2008132469A1 publication Critical patent/WO2008132469A1/en

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    • GPHYSICS
    • G01MEASURING; TESTING
    • G01RMEASURING ELECTRIC VARIABLES; MEASURING MAGNETIC VARIABLES
    • G01R33/00Arrangements or instruments for measuring magnetic variables
    • G01R33/20Arrangements or instruments for measuring magnetic variables involving magnetic resonance
    • G01R33/44Arrangements or instruments for measuring magnetic variables involving magnetic resonance using nuclear magnetic resonance [NMR]
    • G01R33/48NMR imaging systems
    • G01R33/54Signal processing systems, e.g. using pulse sequences ; Generation or control of pulse sequences; Operator console
    • G01R33/56Image enhancement or correction, e.g. subtraction or averaging techniques, e.g. improvement of signal-to-noise ratio and resolution
    • G01R33/5601Image enhancement or correction, e.g. subtraction or averaging techniques, e.g. improvement of signal-to-noise ratio and resolution involving use of a contrast agent for contrast manipulation, e.g. a paramagnetic, super-paramagnetic, ferromagnetic or hyperpolarised contrast agent
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/02Detecting, measuring or recording pulse, heart rate, blood pressure or blood flow; Combined pulse/heart-rate/blood pressure determination; Evaluating a cardiovascular condition not otherwise provided for, e.g. using combinations of techniques provided for in this group with electrocardiography or electroauscultation; Heart catheters for measuring blood pressure
    • A61B5/026Measuring blood flow
    • A61B5/0263Measuring blood flow using NMR
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/41Detecting, measuring or recording for evaluating the immune or lymphatic systems
    • A61B5/414Evaluating particular organs or parts of the immune or lymphatic systems
    • A61B5/415Evaluating particular organs or parts of the immune or lymphatic systems the glands, e.g. tonsils, adenoids or thymus
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61BDIAGNOSIS; SURGERY; IDENTIFICATION
    • A61B5/00Measuring for diagnostic purposes; Identification of persons
    • A61B5/41Detecting, measuring or recording for evaluating the immune or lymphatic systems
    • A61B5/414Evaluating particular organs or parts of the immune or lymphatic systems
    • A61B5/418Evaluating particular organs or parts of the immune or lymphatic systems lymph vessels, ducts or nodes
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01RMEASURING ELECTRIC VARIABLES; MEASURING MAGNETIC VARIABLES
    • G01R33/00Arrangements or instruments for measuring magnetic variables
    • G01R33/20Arrangements or instruments for measuring magnetic variables involving magnetic resonance
    • G01R33/44Arrangements or instruments for measuring magnetic variables involving magnetic resonance using nuclear magnetic resonance [NMR]
    • G01R33/48NMR imaging systems
    • G01R33/54Signal processing systems, e.g. using pulse sequences ; Generation or control of pulse sequences; Operator console
    • G01R33/56Image enhancement or correction, e.g. subtraction or averaging techniques, e.g. improvement of signal-to-noise ratio and resolution
    • G01R33/563Image enhancement or correction, e.g. subtraction or averaging techniques, e.g. improvement of signal-to-noise ratio and resolution of moving material, e.g. flow contrast angiography
    • G01R33/56366Perfusion imaging
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T7/00Image analysis
    • G06T7/0002Inspection of images, e.g. flaw detection
    • G06T7/0012Biomedical image inspection
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/10Image acquisition modality
    • G06T2207/10072Tomographic images
    • G06T2207/100764D tomography; Time-sequential 3D tomography
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/10Image acquisition modality
    • G06T2207/10072Tomographic images
    • G06T2207/10088Magnetic resonance imaging [MRI]
    • GPHYSICS
    • G06COMPUTING; CALCULATING OR COUNTING
    • G06TIMAGE DATA PROCESSING OR GENERATION, IN GENERAL
    • G06T2207/00Indexing scheme for image analysis or image enhancement
    • G06T2207/30Subject of image; Context of image processing
    • G06T2207/30004Biomedical image processing
    • G06T2207/30101Blood vessel; Artery; Vein; Vascular
    • G06T2207/30104Vascular flow; Blood flow; Perfusion
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H20/00ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance
    • G16H20/10ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance relating to drugs or medications, e.g. for ensuring correct administration to patients
    • G16H20/17ICT specially adapted for therapies or health-improving plans, e.g. for handling prescriptions, for steering therapy or for monitoring patient compliance relating to drugs or medications, e.g. for ensuring correct administration to patients delivered via infusion or injection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H30/00ICT specially adapted for the handling or processing of medical images
    • G16H30/20ICT specially adapted for the handling or processing of medical images for handling medical images, e.g. DICOM, HL7 or PACS
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H30/00ICT specially adapted for the handling or processing of medical images
    • G16H30/40ICT specially adapted for the handling or processing of medical images for processing medical images, e.g. editing
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16HHEALTHCARE INFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR THE HANDLING OR PROCESSING OF MEDICAL OR HEALTHCARE DATA
    • G16H50/00ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics
    • G16H50/50ICT specially adapted for medical diagnosis, medical simulation or medical data mining; ICT specially adapted for detecting, monitoring or modelling epidemics or pandemics for simulation or modelling of medical disorders

Definitions

  • the present invention relates to methods and apparatus for estimating a measure relating to the amount or concentration of image contrast-enhancement agent within an imaged subject.
  • Radiological imaging of a subject may enable a determination of valuable physiological parameters when an image contract-enhancing agent is employed.
  • an agent is a substance to be administered to a subject which, when the subject is subsequently imaged, appears as a change of the contrast (e.g. brightness) of the parts of the imaged subject at which the substance is present.
  • contrast e.g. brightness
  • Image contrast-enhancing agent is typically administered into the blood stream of a subject to be imaged.
  • the quantity of agent immediately after administration takes the form of a relatively highly concentrated bolus of substance which disperses, or attenuates in concentration, over time as it is distributed through the circulatory system of the subject.
  • the manner and mechanisms by which this attenuation of concentration occurs may be approximately represented, or modelled, mathematically using a "Vascular Input Function (VIF)".
  • VIF Vascular Input Function
  • Dynamic Contrast Enhanced radiological imaging e.g. Magnetic Resonance Imaging (DCE-MRI)
  • DCE-MRI Magnetic Resonance Imaging
  • the invention aims to provide an efficient and robust methodology that can be used in the case of fast temporal sampling of image data, and/or where a non-negligible plasma fraction is present.
  • the invention proposed is to employ a vascular input function to estimate a measure of contrast agent concentration, which is decomposed into a function component representing the bolus of contrast- enhancing agent and a function component representing equilibration of the bolus by leakage from the circulatory system of the subject in to other parts of the body of the subject (referred to hereafter as the "body transfer function") .
  • a vascular input function to estimate a measure of contrast agent concentration
  • a function component representing the bolus of contrast- enhancing agent and a function component representing equilibration of the bolus by leakage from the circulatory system of the subject in to other parts of the body of the subject referred to hereafter as the "body transfer function"
  • suitable analytical e.g. algebraic
  • the invention may implement a general framework for generating functional forms to define vascular input functions which are efficient to implement.
  • vascular input functions By appropriately specifying the components of a vascular input function it is possible to generate functions that are realistic, and that ensure the analytical curves representing a concentration of contrast agent can be analytically calculated. This means that the computations necessary to estimate kinetic parameters from measured data are efficient (and, therefore, quick) , which is important when used in clinical practice.
  • the methodology may give analytic solutions for both the vascular input function and the representation of the concentration of contrast agent in tissue.
  • the latter may be derived using the vascular input function. This avoids the need for costly numerical convolutions when fitting the functions or representations to measured data, and thus increases the potential applicability of quantitative radiology (e.g. DCE-MRI) in a clinical setting.
  • quantitative radiology e.g. DCE-MRI
  • the present invention may provide a method for estimating a measure of the concentration of an image contrast-enhancing agent within (e.g. the body or circulatory system) of an imaged subject including; providing an analytical mathematical function (e.g. a VIF) comprising function components and including a sum of a first function component (e.g. representing the shape of an injected bolus of a contrast agent) and a second function component in which the second function component includes a convolution of the first function component with a third function component (e.g.
  • an analytical mathematical function e.g. a VIF
  • a first function component e.g. representing the shape of an injected bolus of a contrast agent
  • a third function component e.g.
  • each function component includes one or more adjustable parameters; adjusting the numerical value of one or more adjustable parameters of the function to fit the function to a sequence of values of an image pixel (or pixels) representing a location in the imaged subject at each of a succession of times thereby to determine values for said parameters representative of the sequence; using the representative parameters to estimate a measure of a concentration of the image contrast- enhancing agent within the imaged subject (e.g. within the body, or circulatory system such as within blood plasma, and/or within tissue) .
  • the observed (imaged) temporal changes in the contrast (e.g. brightness) of a pixel (or group of pixels) representing a point or region of interest in a subject's body, due to the presence of an amount of contrast-enhancing agent may used as the basis for estimating the optimal representative values for adjustable parameters of an analytical expression for the VIF.
  • VIF may be used to estimate physiological (e.g.
  • the function may provide an analytical (e.g. algebraic) representation for a vascular input function which does not require lengthy computations to implement in practice. This is to be contrasted with existing purely numerical (or non-analytical) expressions for vascular input functions which require extensive (e.g. time- consuming) computation to implement (such as lengthy numerical integrations) in practice.
  • the second component of the VIF includes a convolution of the first component
  • the first function component may be representative of the bolus of a contrast-enhancing agent ("contrast agent")
  • the third function component may be representative of the equilibration of the bolus by leakage of the agent from the circulatory system to other parts of the subject's body.
  • the representative adjustable parameters may provide a measure of the amount of contrast agent in the bolus, the rate of attenuation/leakage of the agent in the bolus, and other measures representative of (or related to) concentration of contrast agent in an imaged region (e.g. blood plasma) .
  • an imaged region e.g. blood plasma
  • intimately relating the first and second function components in this way one may help ensure that some adjustable parameters are common to both the first and second function components.
  • This constraint enables the procedure of fitting the functions to image data to be more stable, robust and accurate. It greatly reduces the likelihood of unrealistic or unphysical parameter values arising from the fitting procedure, which may often occur in existing methodologies in which adjustable parameters are not sufficiently constrained.
  • the representative parameters may themselves be used directly to provide a measure of (or relating to) a concentration of contrast agent within e.g. the blood plasma of the imaged subject at the imaged region. Additionally, the representative parameters may be used to determine an estimate of a concentration of the contrast agent in another part of the body of the imaged subject (e.g. within imaged tissue). This may be done by using the representative parameters in a model, expression or procedure for determining levels of concentration of contrast agent in tissue from an estimate of contrast agent concentration levels in plasma.
  • the fitting procedure may include minimising the value of a measure of the difference between the values of the image pixel (s) in the sequence and the corresponding values of the function.
  • the fitting procedure preferably aims to find values for the adjustable parameters which result in a function having a shape most closely matching the overall shape of the temporal sequence of the pixel values. This aims to enable the function to be used as a continuous analytical representation of the temporal development of the value of the image pixel (s) representing the location in the imaged subject in question.
  • the independent variable of the function is the time variable (t) such that the function may represent a time variation of contrast agent concentration, with a set of adjustable parameters.
  • the method may include providing the integral of the function, determining values for a cumulative sum of the sequence of pixel values, adjusting the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum.
  • the method may include determining the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum.
  • the fitting procedure may include a least-squares fitting of the integral of the function to a cumulative sum of the pixel values in the sequence.
  • the proposed method forces the fitting procedure to take account of all data and so apply an important constraint which is much more likely to result in accurate, meaningful and practically useful parameter values for use in analysing image data.
  • the integral of the function may most preferably be an analytical mathematical function (e.g. an algebraic function) since the function itself is analytical. This enables the fitting procedure to be performed quickly and accurately in avoiding the need to employ time-consuming or error-prone numerical integrations, which would otherwise be the case. Rather, merely the values of a relatively simple analytical expression need be evaluated.
  • an analytical mathematical function e.g. an algebraic function
  • the method may ' include generating a cost function and adjusting the numerical value of adjustable parameters ⁇ of the function to minimise the numerical value of the cost function, where the cost function includes the term ⁇ ) given by where and C 1 Q 1 , ⁇ ) is the numerical value of the integral of the function for the time /, within the sequence, and y is the j th pixel value in the sequence.
  • the integral of the function is most preferably an analytical mathematical expression.
  • the integral of the function (denoted cAt)) may be given by and is preferably used/provided in analytical form.
  • the cost function may employ not only a cumulative sum of measured data and the integrated function, but may also employ the values of the differences between the pixel values and the corresponding function values, such as a sum (e.g. cumulative) of the sequence of such differences.
  • the cost function may be a weighted sum of a measure of difference between the cumulative sum of pixel values and the function integral, and a measure of difference between the pixel values and the function.
  • the cost function may be given by
  • the weights W 1 and w p may be adjusted to adjust the relative importance of the two parts of the cost function.
  • the image pixel values may represent a location containing blood plasma.
  • the method may include using the representative parameters to estimate a measure of the concentration of contrast-enhancing agent within blood plasma of the imaged subject at said location.
  • At least some of the image pixel values may represent a location within a bolus of contrast-enhancing agent.
  • the first function component containing said representative parameters may represent a concentration of contrast- enhancing agent within the bolus .
  • the first function component may be arranged to so represent a smooth and continuous peak in a changing concentration of contrast agent at an imaged location.
  • a rise, and subsequent fall, of a concentration of contrast agent may be represented by the first function component so as to represent an effect of a passage of the bolus through (or near to) the imaged region represented by the pixel (s) in respect of which the first function component is to be representative.
  • the first function component may be arranged to represent the smooth, but often rapid, rise and fall in concentration due to the first-pass of the bolus through (or near to) an imaged location.
  • the first function component may include the term c B (t) given by where t represents time, a B and ⁇ B are adjustable parameters.
  • the third function component may include the term c G (t) given by c c (t) -a G exp(- ⁇ G t) where t represents time, a G and ⁇ G are adjustable parameters.
  • This function component may be representative of the body transfer function discussed above.
  • the function c p ⁇ t) and/or the representative parameters may be used to estimate a measure of the concentration c t (f) of the image-contrast enhancing agent within tissue in the body of the imaged subject.
  • function and/or parameters may be used to describe the leakage of contrast agent into the extracellular-extravascular space (EES) of the imaged tissues.
  • the function may be used as a component of a further function c t (t) representative of the concentration of image-contrast enhancing agent within tissue in the body of the imaged subject.
  • the further function may be of the form: where h (t) is preferably an analytical mathematical function representative of the mechanism(s) for propagation of contrast agent within the imaged tissue (e.g. a tissue residue function).
  • the parameter v p may be an adjustable parameter.
  • the function h (t) may contain adjustable parameters, and may take the form:
  • K (min ) K' ms e ⁇ p(rk tp t) trans -1
  • K (min ) may be representative of the volume transfer constant between the blood plasma and the EES
  • k ep (min ) may be representative of the rate constant between the EES and the blood plasma.
  • the adjustable parameter v P may be representative of the proportion of plasma present (the "plasma fraction") .
  • the method may include estimating any one or more of the above kinetic or physiological measures using the value of the associated representative parameter.
  • the parameter ⁇ o may have a value to represent the time of arrival of contrast in the subject at the location represented in the image
  • ⁇ o may be determined by the fitting procedure with ⁇ o an adjustable parameter.
  • the invention may provide apparatus for estimating a measure of the concentration of an image contrast-enhancing agent within an imaged subject (e.g. within the body) including computer means for providing a representation of an analytical mathematical function comprising function components and including a sum of a first function component and a second function component in which the second function component includes a convolution of the first function component with a third function component, wherein each function component includes one or more adjustable parameters, and for receiving a sequence of values of an image pixel representing a location in the imaged subject at each of a succession of times; the computer means being arranged to adjust the numerical value of adjustable parameters of the function to fit the function to the sequence thereby to determine values for said parameters representative of the sequence; the computer means being further arranged to use the representative parameters to estimate a measure of the concentration of the image-contrast enhancing agent within (e.g. the body of) the imaged subject.
  • computer means for providing a representation of an analytical mathematical function comprising function components and including a sum of a first function component and a second function component in which
  • the computer ' means may be arranged to provide a representation of the integral of the function, to determine values for a cumulative sum of the sequence of pixel values, to adjust the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum.
  • the computer means may be arranged to determine the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum.
  • the computer means may be arranged to generate a cost function and to adjust the numerical value of adjustable parameters ⁇ of the function to minimise the numerical value of the cost function, where the cost function includes the term ⁇ ( ⁇ ) given by where and C,(t t , ⁇ ) is the numerical value of the integral of the function for the time t, within the sequence, and y ⁇ is the j th pixel value in the sequence.
  • the integral of the function c p (t) may be given by and the computer means may provide a representation of the integral in analytical form.
  • the computer means may be arranged to determine the cost function as a weighted sum of a measure of difference between the cumulative sum of pixel values and the function integral, and a measure of difference between the pixel values and the function. For example, the cost function may be determined as
  • the weights W 1 and w p may be adjusted by the computer (or user) to adjust the relative importance of the two parts of the cost function.
  • the integral of the function is preferably an analytical mathematical expression.
  • the image pixel values may represent a location containing blood plasma.
  • the computer means may be arranged to use the representative parameters to estimate a measure of the concentration of contrast-enhancing agent within blood plasma of the imaged subject at said location.
  • At least some of the image pixel values may represent a location within a bolus of contrast-enhancing agent.
  • the first function component containing said representative parameters may represent a concentration of contrast enhancement agent within the bolus.
  • the computer means may be arranged to use the function c p (t) and/or the representative parameters to estimate a measure of the concentration c t ⁇ t) of the image-contrast enhancing agent within tissue in the body of the imaged subject.
  • the computer means may be arranged to enable the function and/or parameters may be used to describe the leakage of contrast agent into the extracellular- extravascular space (EES) of the imaged tissues.
  • EES extracellular- extravascular space
  • the computer means may be arranged to provide a representation of a further function c t (t) , and may be arranged to use the function as a component of the further function.
  • the computer means may be arranged to use the further function c,(t) in a representation of the concentration of image-contrast enhancing agent within tissue in the body of the imaged subject.
  • the computer means may be arranged to provide a representation of a further function c t (t) , and may be arranged to use the function as a component of the further function.
  • the computer means may be arranged to use the further function c,(t) in a representation of the concentration of image-contrast enhancing agent within tissue in the body of the
  • v p may be an
  • the function h (t) may contain adjustable parameters, and may take the form: trans 1 where K (min ⁇ ) may be provided as representative of the volume transfer constant between the blood plasma and
  • the computer means may be arranged to provide a value of the adjustable parameter v P which may be representative of the proportion of plasma present (the "plasma fraction") .
  • the computer means may be arranged to estimate any one or more of the above kinetic or physiological measures using the values of the associated representative parameters.
  • temporal sequence of image pixel values of imaged tissue of the subject e.g. consecutive pixel brightness values associated with a tissue region undergoing changing levels of contrast agent concentration
  • representative parameter values e.g. being those associated with the optimal fit of the further function to observed data
  • the pixel values to which functional forms may be fitted may be determined according to the acquired radiological (e.g. NMR) signal intensity converted to contrast agent concentration using the method of Wang et al . Magn. Reson. Med. 5(5), (1987) pp399-416. Methods other than that of Wang et al may be used for this purpose.
  • the aspects described herein are suitable for use in analysis of images acquired by nuclear magnetic resonance imaging, CT imaging, PET imaging or any other image acquisition method in which image contrast-enhancing agents may be' used.
  • the third function component (e.g. BTF) may be given by:
  • i,j l, 2, 3... denotes the i th or j th term in the sum of terms, and a ⁇ , ⁇ £ ( and /4° are parameters adjustable to be representative of recirculation of the bolus, and
  • OQ and ⁇ are parameters adjustable to be representative of equilibration, renal excretion or any other processes. Any of the amplitude terms a ⁇ or a ⁇ may be set to zero as desired.
  • Figure 1 illustrates graphically the form of VIFs (left panel) , and both the integral of the VIFs over time (right panel)
  • Figure 2 illustrates graphically the form of VIFs (left panel) , and both the integral of an analytical VIF together with a cumulative sum of pixel values (right panel) ;
  • Figure 3 illustrates four tissue kinetic parameter maps for image data of a subject containing a primary bladder tumour
  • Figure 4 illustrates apparatus for determining kinetic parameters from image pixel data.
  • contrast agent is injected in to a peripheral vein of a subject to be imaged, the bolus passes through the cardio-pulmonary system. The bolus is then transported to the arterial side of all organs, including the imaged region, so that an element of the shape of the required input function is the bolus shape as it enters the imaged region, denoted c B (t) . As the bolus travels through the tissues, some contrast agent generally leaks from the bolus, and the network of capillaries tends to delay and disperse the bolus.
  • This process mixes the bolus of contrast agent • with the entire blood pool due to continual recirculation. Transfer of contrast agent from the plasma into the whole body leakage space eventually leads to an equilibrium concentration in the blood plasma. These processes of recirculation, mixing and leakage predominantly occur over timescales below 10-20 minutes. At the same time, renal excretion permanently removes contrast agent from the plasma pool. However, this process generally happens more slowly, e.g. at a rate equivalent to a concentration attenuation with a half life of around an hour. All these effects are represented by a body transfer function (BTF) denoted G(t). The function driving this process is the shape of the bolus of contrast agent for the imaged region, c B (t). The concentration of contrast agent in the blood plasma c P ⁇ t) may then be represented by a superposition of the bolus shape and its shape after some modification by the body transfer function, that is:
  • VIF #2
  • VIFs The three VIFs (c P (t)) described above have the advantage that they have relatively simple algebraic forms.
  • the additional ⁇ term gives increased flexibility in choosing the representation of the bolus shape, particularly the initial rise of the contrast agent concentration through the bolus.
  • the advantage of the raised cosine in VIF #3 is to achieve a similar bolus shape to this model with ⁇ >l, but to avoid the need for large summations or special functions.
  • the first case for /J(-) listed above is the basic definition of the function, and the other three cases listed below the first case are formed from combinations of the following taylor-series
  • 0 and
  • >£ j the second listed of the above-listed cases of the expression for _/j(-) may be used. When this is evaluated it may be reduced to t— ⁇ ⁇ sin( ⁇ t) , which will give the correct numerical result.
  • the convolution of a raised cosine model with gamma form may serve as an alternative template function used to construct the tissue function when one of the input function parameters or is (or is substantially) equal to one of the leakage parameters.
  • the convulusion is:
  • tissue residue function For the St Lawrence & Lee model the tissue residue function may be given by
  • F is an adjustable parameter quantifying blood flow rate (ml/lOOg/min)
  • E f is a parameter quantifying the extraction fraction (no units)
  • k ep is the return rate constant (min "1 )
  • T c is the capilliary transit time (min) .
  • the tissue residue function can be considered as a sum of three exponentials with rates 0 , 0 and k respectively and delays 0 , T c and T c .
  • the equation for the tissue curve may be given by
  • the second term of the equation for the tissue curve can be considered in two stages.
  • the first two lines compute the difference between two template functions whose arguments differ only by a delay of T c . If T c is very small then this will cause underflow problems, which can be avoided by placing a lower-bound on T c . For floating point calculations (e.g. IDL) a lower limit of lCr 3 is appropriate. The third line will experience underflow problems when k ep ⁇ G . These terms are generated
  • the bolus model is a gamma variate function with integer exponent (the integer exponent m is analogous to the integer exponent ⁇ referred to elsewhere herein) ,
  • the helper function f m (-) is defined by
  • ⁇ m , L 1n and Z 1n are defined in the following table.
  • helper function is preferred to avoid problems with numerical underflow, overflow and division by zero.
  • / m (-) may be evaluated via , so the final computation may be correctly computed without division by zero.
  • the thresholds ⁇ m are preferably chosen to ensure that the direct form of the equation, ⁇ m (z) , is only used when the result will not suffer from underflow. This is caused by the difference between e ⁇ and the summation in the expression for ot m (z) underflowing the machine precision, which happens when IzI is small.
  • the upper limits Z m are preferable so that the e z term in oc m (z) does not overflow for large positive z , when the alternative 7 m (z) expression is used. For large negative z , the expression for a m ( z ) m ay preferaby be used, and although the computation of e z may suffer from underflow, the result may still be accurate.
  • These limiting functions may be accurately computed for suitably large ⁇ z ⁇ , so thresholds ⁇ m preferably exist such that oc m ⁇ z) is accurately computed for ⁇ z ⁇ > ⁇ m .
  • thresholds one may define upper limits for the summation in ⁇ m (z) that prefereably ensure the truncation error is negligible. Since all the thresholds are less than unity, the summation series is decreasing, so L 1n may be defined to ensure that the largest truncated term of the series is smaller than the largest term in the series by an appropriate fraction.
  • the upper thresholds Z m may be be derived by finding solutions to the equation
  • the helper function g 1 (•) is defined by
  • the upper thresholds Z m can be derived by finding solutions to the equation
  • VIF may be used to generate a measure of a concentration of a contrast agent in a tissue of the imaged subject.
  • k ep (min ) is the rate constant between the EES and the blood plasma and v P is the proportion of plasma present (the "plasma fraction") .
  • VIF #1 VIF #1
  • VIF #2 and #3 are more appealing than VI F # 1 because for both the initial phase of the bolus rises from zero , rather than j umping abruptly ( see figure 1 ) .
  • it is instructive to quantitatively determine how this difference affects the tissue parameter estimates and this is done by means of a simulation-based experiment .
  • ⁇ n is a Gaussian-distributed random sample
  • the expected p-value is 0.5, and typically a threshold of p ⁇ 0.001 is used to reject implausible VIFs.
  • Parameters for the proposed input functions were obtained by least-squares fitting the time-integral of the population input function to the time-integral of each of the proposed input function models over the same range as the test data, that is te [0, 3] .
  • the time-integral of the population input function was obtained by numerical integration, and the corresponding integrals for the proposed VIFs by analytic integration of equations (2), (3) and (4) .
  • the black dash-dot line is the population derived input function
  • the gray dashed line is VIF #1
  • the solid black line is VIF #2
  • the solid gray line is VIF #3.
  • the left panel shows the curves c p (t)
  • the overall objective of fitting the VIF to the image pixel sequence is to fit a given VIF (vascular input function) to noisy data.
  • the fitted curves and pixel data each consist of an initial period with zero concentration followed by a short peak (due to the bolus) and a longer period of gradually decreasing concentration, as shown in figures 1 and 2.
  • the solution employed here is to fit the integral of the VIF model curve to the cumulative sum of the pixel data using a least-squares method. This tends to give more plausible results because the fitting is driven by the area and duration of the part of the data dominated by the bolus, rather than the amplitude and duration of that part.
  • the procedure is mathematically described below.
  • C,(t, ⁇ ) may be available analytically.
  • the fitting process uses a cost function of the form
  • Standard algorithms are used to find the ⁇ that minimises ⁇ ( ⁇ ) .
  • Another possibility is to use a cost function that combines both the original data and the cumulative data, that is
  • the weights W 1 and w p are used to adjust the relative importance of the two parts of the cost function.
  • Table 2 shows mean values for the parameter estimates over the 2000 data sets for each scenario described in the previous section. Uncertainties are given as plus/minus two standard deviations, and the average p-
  • VIF #2 the bias is much reduced - the two standard deviation interval contains the true value in every case.
  • the average p-value is distinctly less than 0.5, but is sufficiently large to suggest that statistically, VIF #2 is little different from the population input function in this context.
  • VIF #3 the bias is similar to VIF #2, though the variance is generally slightly smaller. However, the p-values suggest that VIF #3 is statistically indistinguishable from the population input function in this context.
  • VIF #2 is a reasonable compromise between statistical accuracy and model complexity. Therefore, an example is given of the application of VIF #2 to some in-vivo data taken from a patient with a bladder carcinoma.
  • the dynamic data for this study were obtained using a Siemens Avanto, and consisted of 70 dynamic measurements acquired every 5.6s using a 3D spoiled gradient-echo sequence during shallow breathing.
  • Magnevist contrast agent (relaxivity of 4.26
  • interpolated matrix size 12 slices, 5mm slice thickness, 1 acquisition.
  • the acquired signal intensity was converted to contrast agent concentration using the method of Wang et al. Magn. Reson. Med. 5(5), (1987) pp399-416.
  • Parameters for the input function #2 were obtained using data taken from the femoral artery. A sequence of the values of the pixel with the highest peak concentration was used, and this sequence is shown with the fitted input function (c p (t)) in the left panel of figure 2. As with the input functions for the simulation, the input function parameters (including an onset-time parameter) were derived by least-squares fitting the integral of the input function to the cumulative sum of the data.
  • the left panel shows the data (dots) taken from the femoral artery, and the fitted input function curve (solid line) .
  • the population input function is also shown (dashed line) .
  • the right panel shows the cumulative sum of the data (dots) and the curve used to generate the fits, which is the integral of the input function #2.
  • Fitting to the cumulative sum of the data tends to be more stable since the noise is smoothed by this process, and also because the parameters for the first function component c B (t) (bolus model) are forced to match the corresponding area under the data, rather than the data points themselves. This is particularly beneficial in this example as there are two parameters in the model that define the bolus, and only two data points acquired during the bolus passage.
  • FIG. 3 shows estimated representative parameter maps for four regions of interest (ROI) each indicated by an arrow and superimposed on an anatomical Tl-weighted image.
  • ROI regions of interest
  • the centrally placed ROI is a primary bladder carcinoma
  • the ROI in the top right of the image is a malignant or involved lymph-node
  • the two gluteal muscles are included to give some estimates that can be compared to literature values.
  • An unsuccessful fit was defined as one where v e >l or where the least-squares minimisation routine (e.g. a Levenburg-Marquardt algorithm implemented in IDL) failed to converge.
  • tissue kinetic parameter maps are shown for a data set containing a primary bladder tumour and a malignant or involved lymph-node.
  • the two ROIs near the bottom of the images are the gluteal muscles, and the tone-scale bars at the right-hand edge of each figure panel show the numerical tone scaling for each parameter.
  • Table 4 gives summary of statistics for the representative parameter estimates for the successful fits in the four ROIs.
  • the plasma fraction in the two tumour regions with median values of 4% for the bladder tumour and 2% for the lymph-node.
  • the simulations indicate that (contingent on the input function being appropriate) these values are reliable with VIF #2 (and VIF #3), but that VIF #1 would give biassed estimates.
  • the plasma fraction is very small in the muscle, and this is as expected for resting muscle.
  • the median v e for the two muscle ROIs is 0.084, which
  • Figure 4 schematically illustrates apparatus for estimating a measure of concentration of contrast agent within the body of an imaged subject 11.
  • An image acquisition device (such as an NMR scanner) 10 acquires image data of a region of the body of the subject 11 as a time sequence of successive images of the region within which concentration levels of contrast agent vary.
  • the image data 12 is input to a computer 13 for analysis.
  • the computer 13 includes a storage device 14 arranged to store image data generated by the imaging apparatus 10.
  • the image data received by the computer may be received directly from the image generator or may be received as pre-stored image data 16 input to the computer via an external data storage device 20 in which previously acquired image data 22 was stored for subsequent input to the computer.
  • the computer includes a processing unit 15 arranged or programmed to implement the method described above.
  • the processing unit is operably connected to the data store 14 via a data transfer link 18 via which image data is passed to the processor unit.
  • Parameter values determined by the processor unit are transmittable from the processor unit to the memory store via a data transfer link 17.
  • Stored parameter values calculated by the processor unit 15 may then be passed to a user input/output device and/or graphical interface unit 21 in order to be communicated to the user (e.g. graphic biological data 19) .
  • representative parameter values associated with a vascular input function may be input to the computer as input data for use, according to a methodology described above, in generating estimates of kinetic parameters associated with contrast agent concentration levels in tissue of the imaged subject.
  • the processor unit 15 may be arranged or programmed to implement such methods as described above, and as illustrated in Figures 1 to 3 herein.
  • the processor unit is programmed, or arranged, to provide a desired VIF and/or a function c t (t) representative of a concentration of contract agent in imaged tissue, as desired, with adjustable parameters.
  • the processor unit is arranged to fit the VIF or c t (t) to input image data as described above to generate representative parameter values and/or estimates of kinetic parameters associated with the imaged subject.

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Abstract

A vascular input function, to estimate a measure of contrast agent concentration, which is decomposed into a function component representing the bolus of contrast-enhancing agent and a function component representing equilibration of the bolus by leakage from the circulatory system of the subject in to other parts of the body of the subject (referred to as the 'body transfer function'). Restricting the components to suitable analytical (e.g. algebraic) mathematical functions ensures that the calculations can be carried out analytically.

Description

ESTIMATION OF A MEASURE OF CONTRASTAGENT CONCENTRATION USING AN ANALYTICAL MATHEMATICAL MODEL
The present invention relates to methods and apparatus for estimating a measure relating to the amount or concentration of image contrast-enhancement agent within an imaged subject.
Radiological imaging of a subject may enable a determination of valuable physiological parameters when an image contract-enhancing agent is employed. Such an agent is a substance to be administered to a subject which, when the subject is subsequently imaged, appears as a change of the contrast (e.g. brightness) of the parts of the imaged subject at which the substance is present. By monitoring the temporal and/or spatial development of the concentration of the substance in a subject, via a sequence of radiological images over a time period, one may enable an estimate to be made of certain physiological parameters (often referred to as "kinetic parameters") of the subject.
Image contrast-enhancing agent is typically administered into the blood stream of a subject to be imaged. The quantity of agent immediately after administration takes the form of a relatively highly concentrated bolus of substance which disperses, or attenuates in concentration, over time as it is distributed through the circulatory system of the subject. The manner and mechanisms by which this attenuation of concentration occurs may be approximately represented, or modelled, mathematically using a "Vascular Input Function (VIF)". By using an appropriate VIF one may describe the temporal development of a measure of the concentration of the agent within a specified component of the subject's circulatory system. For example, applying the vascular input function to further mathematical processing, according to separate models of the manner in which the agent propagates from the circulatory system to other parts (e.g. tissues) of the subject's body, may provide kinetic parameters.
Obtaining accurate quantitative estimates of tissue kinetic parameters using Dynamic Contrast Enhanced radiological imaging (e.g. Magnetic Resonance Imaging (DCE-MRI) ) requires an accurate characterisation of the concentration of contrast agent in the blood plasma.
Many studies have demonstrated that inaccuracies in the vascular input function may propagate through to the estimated tissue parameters, and so it is important to accurately characterise the vascular input function. Using mathematically-defined models for the vascular input function has advantages over directly measuring agent concentration levels, as the estimation procedure is more stable, and parameter estimates tend to be more accurate if the vascular input function is appropriate.
However, models and parameter values proposed in current methods are often only applicable when there is a negligible proportion of plasma present in the imaged region of the subject under study (often referred to as the "plasma fraction") . When the plasma fraction is non- negligible such approaches tend to produce over-estimates of kinetic parameters (e.g. the volume-transfer constant trans
K ) . Furthermore, many existing methods are numerically intensive (e.g. requiring complex numerical processing of mathematical operations) and therefore slow and complex to implement.
The invention aims to provide an efficient and robust methodology that can be used in the case of fast temporal sampling of image data, and/or where a non-negligible plasma fraction is present.
At its most general, the invention proposed is to employ a vascular input function to estimate a measure of contrast agent concentration, which is decomposed into a function component representing the bolus of contrast- enhancing agent and a function component representing equilibration of the bolus by leakage from the circulatory system of the subject in to other parts of the body of the subject (referred to hereafter as the "body transfer function") . Restricting the components to suitable analytical (e.g. algebraic) mathematical functions ensures that the calculations can be carried out analytically. Even within these constraints, realistic representations can be produced. These may describe a peak in contrast-enhancing agent concentration at a region where the bolus first passes, observed after injection of a bolus of contrast agent. A subsequent recirculation peak may be described to represent concentration rises as the bolus passes a subsequent time, and the later phases.
The invention may implement a general framework for generating functional forms to define vascular input functions which are efficient to implement. By appropriately specifying the components of a vascular input function it is possible to generate functions that are realistic, and that ensure the analytical curves representing a concentration of contrast agent can be analytically calculated. This means that the computations necessary to estimate kinetic parameters from measured data are efficient (and, therefore, quick) , which is important when used in clinical practice.
The methodology may give analytic solutions for both the vascular input function and the representation of the concentration of contrast agent in tissue. The latter may be derived using the vascular input function. This avoids the need for costly numerical convolutions when fitting the functions or representations to measured data, and thus increases the potential applicability of quantitative radiology (e.g. DCE-MRI) in a clinical setting.
Accordingly, in a first of its aspects, the present invention may provide a method for estimating a measure of the concentration of an image contrast-enhancing agent within (e.g. the body or circulatory system) of an imaged subject including; providing an analytical mathematical function (e.g. a VIF) comprising function components and including a sum of a first function component (e.g. representing the shape of an injected bolus of a contrast agent) and a second function component in which the second function component includes a convolution of the first function component with a third function component (e.g. a body- transfer function) , wherein each function component includes one or more adjustable parameters; adjusting the numerical value of one or more adjustable parameters of the function to fit the function to a sequence of values of an image pixel (or pixels) representing a location in the imaged subject at each of a succession of times thereby to determine values for said parameters representative of the sequence; using the representative parameters to estimate a measure of a concentration of the image contrast- enhancing agent within the imaged subject (e.g. within the body, or circulatory system such as within blood plasma, and/or within tissue) .
Thus, the observed (imaged) temporal changes in the contrast (e.g. brightness) of a pixel (or group of pixels) representing a point or region of interest in a subject's body, due to the presence of an amount of contrast-enhancing agent, may used as the basis for estimating the optimal representative values for adjustable parameters of an analytical expression for the VIF. These values, and the analytical expression for the
VIF, may be used to estimate physiological (e.g.
"kinetic") parameters of the subject or any other measure of, or related to, a concentration of contrast agent
(e.g. the concentration itself) within the subject. The function may provide an analytical (e.g. algebraic) representation for a vascular input function which does not require lengthy computations to implement in practice. This is to be contrasted with existing purely numerical (or non-analytical) expressions for vascular input functions which require extensive (e.g. time- consuming) computation to implement (such as lengthy numerical integrations) in practice.
Furthermore, by requiring that the second component of the VIF includes a convolution of the first component, one may provide a methodology by which the first function component may be representative of the bolus of a contrast-enhancing agent ("contrast agent") and the third function component may be representative of the equilibration of the bolus by leakage of the agent from the circulatory system to other parts of the subject's body.
This enables a simple application and interpretation of the adjustable parameters of the function in use. The representative adjustable parameters may provide a measure of the amount of contrast agent in the bolus, the rate of attenuation/leakage of the agent in the bolus, and other measures representative of (or related to) concentration of contrast agent in an imaged region (e.g. blood plasma) . Furthermore, by intimately relating the first and second function components in this way one may help ensure that some adjustable parameters are common to both the first and second function components. This constraint enables the procedure of fitting the functions to image data to be more stable, robust and accurate. It greatly reduces the likelihood of unrealistic or unphysical parameter values arising from the fitting procedure, which may often occur in existing methodologies in which adjustable parameters are not sufficiently constrained.
The representative parameters, once determined, may themselves be used directly to provide a measure of (or relating to) a concentration of contrast agent within e.g. the blood plasma of the imaged subject at the imaged region. Additionally, the representative parameters may be used to determine an estimate of a concentration of the contrast agent in another part of the body of the imaged subject (e.g. within imaged tissue). This may be done by using the representative parameters in a model, expression or procedure for determining levels of concentration of contrast agent in tissue from an estimate of contrast agent concentration levels in plasma. The fitting procedure may include minimising the value of a measure of the difference between the values of the image pixel (s) in the sequence and the corresponding values of the function. The fitting procedure preferably aims to find values for the adjustable parameters which result in a function having a shape most closely matching the overall shape of the temporal sequence of the pixel values. This aims to enable the function to be used as a continuous analytical representation of the temporal development of the value of the image pixel (s) representing the location in the imaged subject in question.
It will be understood that the independent variable of the function is the time variable (t) such that the function may represent a time variation of contrast agent concentration, with a set of adjustable parameters.
The method may include providing the integral of the function, determining values for a cumulative sum of the sequence of pixel values, adjusting the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum. The method may include determining the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum. The fitting procedure may include a least-squares fitting of the integral of the function to a cumulative sum of the pixel values in the sequence.
It has been found that fitting the integral of the function to the cumulative sum of the sequence of values of a pixel tends to lead to much more stable and realistic representative parameter values. Noise in the image data is inherently smoothed by the process. Also, those parameters of the function which are representative of an injected bolus of contrast agent are forced to best match the cumulative sum of pixel value data rather than the individual values of the pixel themselves. This can be particularly beneficial when the sequence of values of the pixel contains (as is often the case) a few values (e.g. 2 or 3) much larger than others representing a brief surge in contrast agent concentration levels due to a passage of the bolus directly through, or close to, the imaged position. With such few data points being available to represent such a relatively significant data feature, standard curve-fitting methods often simply adjust the values of the adjustable parameters of the function to values to produce a good fit of the function to the few large pixel values, but in doing so often provide implausibly large values for times interpolated between the large pixel values (e.g. the function may "overshoot" between the large pixel values) . This typically results in representative values for the parameters which are unrealistic or even physiologically implausible .
The proposed method forces the fitting procedure to take account of all data and so apply an important constraint which is much more likely to result in accurate, meaningful and practically useful parameter values for use in analysing image data.
The integral of the function may most preferably be an analytical mathematical function (e.g. an algebraic function) since the function itself is analytical. This enables the fitting procedure to be performed quickly and accurately in avoiding the need to employ time-consuming or error-prone numerical integrations, which would otherwise be the case. Rather, merely the values of a relatively simple analytical expression need be evaluated.
The method may ' include generating a cost function and adjusting the numerical value of adjustable parameters φ of the function to minimise the numerical value of the cost function, where the cost function includes the term χ{φ) given by
Figure imgf000014_0001
where
Figure imgf000014_0002
and C1Q1,φ) is the numerical value of the integral of the function for the time /, within the sequence, and y is the jth pixel value in the sequence. The integral of the function is most preferably an analytical mathematical expression. The integral of the function (denoted cAt)) may be given by
Figure imgf000014_0003
and is preferably used/provided in analytical form.
The cost function may employ not only a cumulative sum of measured data and the integrated function, but may also employ the values of the differences between the pixel values and the corresponding function values, such as a sum (e.g. cumulative) of the sequence of such differences.
The cost function may be a weighted sum of a measure of difference between the cumulative sum of pixel values and the function integral, and a measure of difference between the pixel values and the function. For example, the cost function may be given by
Figure imgf000015_0001
The weights W1 and wp may be adjusted to adjust the relative importance of the two parts of the cost function.
The image pixel values may represent a location containing blood plasma. The method may include using the representative parameters to estimate a measure of the concentration of contrast-enhancing agent within blood plasma of the imaged subject at said location.
At least some of the image pixel values may represent a location within a bolus of contrast-enhancing agent. The first function component containing said representative parameters may represent a concentration of contrast- enhancing agent within the bolus .
The first function component may be arranged to so represent a smooth and continuous peak in a changing concentration of contrast agent at an imaged location. In this way, a rise, and subsequent fall, of a concentration of contrast agent may be represented by the first function component so as to represent an effect of a passage of the bolus through (or near to) the imaged region represented by the pixel (s) in respect of which the first function component is to be representative. In particular, the first function component may be arranged to represent the smooth, but often rapid, rise and fall in concentration due to the first-pass of the bolus through (or near to) an imaged location.
The first function component may include the term cB(t) given by cB(t) = aBta exp(—μBt) where t represents time, aB and μB are adjustable parameters, and a may have integer value e.g. a value of 1 (one), or any other integer (e.g. 2, 3, 4 or 5 etc), or may be zero.
The first function component may include the term cB(t) given by
Figure imgf000016_0001
where t represents time, aB and μB are adjustable parameters. The time variable is preferably limited to a range of values within one period of the term cos(μBt) , e.g. mtB ≤ t ≤ (m + \)tB where tB=2πμB ~ , and m = 0, 1, 2, 3 ... etc. The third function component may include the term cG(t) given by cc(t) -aG exp(-μGt) where t represents time, aG and μG are adjustable parameters. This function component may be representative of the body transfer function discussed above. The function may be given by cp(t)= cB(t)+ cB(t)®G(t) where Θ represents a convolution operation.
The function cp{t) and/or the representative parameters may be used to estimate a measure of the concentration ct(f) of the image-contrast enhancing agent within tissue in the body of the imaged subject. For example, function and/or parameters may be used to describe the leakage of contrast agent into the extracellular-extravascular space (EES) of the imaged tissues. The function may be used as a component of a further function ct(t) representative of the concentration of image-contrast enhancing agent within tissue in the body of the imaged subject. The further function may be of the form:
Figure imgf000017_0001
where h (t) is preferably an analytical mathematical function representative of the mechanism(s) for propagation of contrast agent within the imaged tissue (e.g. a tissue residue function). The parameter vp may be an adjustable parameter. The function h (t) may contain adjustable parameters, and may take the form:
h(t) = K'mseκp(rktpt) trans -1 where K (min ) may be representative of the volume transfer constant between the blood plasma and the EES,
-1 and kep (min ) may be representative of the rate constant between the EES and the blood plasma. The adjustable parameter vP may be representative of the proportion of plasma present (the "plasma fraction") . The fraction of trans contrast agent in the EES may be given by ve=K /kep. The method may include estimating any one or more of the above kinetic or physiological measures using the value of the associated representative parameter. The method
may include fitting the further function ct(t — τo) to a
temporal sequence of values of an image pixel of imaged tissue of the subject (e.g. consecutive pixel brightness values associated with a tissue region undergoing changing levels of contrast agent concentration) in order to determine the representative parameter values (e.g. being those associated with the optimal ,fit of the
further function to observed data) . The parameter τo may have a value to represent the time of arrival of contrast in the subject at the location represented in the image
data by the image pixel in question. The value of τo may be determined by the fitting procedure with τo an adjustable parameter.
It will be appreciated that the method described above may be implemented on suitably arranged apparatus, such as apparatus including suitably programmed computer means, and the invention encompasses such apparatus.
In a another of its aspects, the invention may provide apparatus for estimating a measure of the concentration of an image contrast-enhancing agent within an imaged subject (e.g. within the body) including computer means for providing a representation of an analytical mathematical function comprising function components and including a sum of a first function component and a second function component in which the second function component includes a convolution of the first function component with a third function component, wherein each function component includes one or more adjustable parameters, and for receiving a sequence of values of an image pixel representing a location in the imaged subject at each of a succession of times; the computer means being arranged to adjust the numerical value of adjustable parameters of the function to fit the function to the sequence thereby to determine values for said parameters representative of the sequence; the computer means being further arranged to use the representative parameters to estimate a measure of the concentration of the image-contrast enhancing agent within (e.g. the body of) the imaged subject.
The computer 'means may be arranged to provide a representation of the integral of the function, to determine values for a cumulative sum of the sequence of pixel values, to adjust the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum. The computer means may be arranged to determine the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum.
The computer means may be arranged to generate a cost function and to adjust the numerical value of adjustable parameters φ of the function to minimise the numerical value of the cost function, where the cost function includes the term χ(φ) given by
Figure imgf000020_0001
where
Figure imgf000020_0002
and C,(tt,φ) is the numerical value of the integral of the function for the time t, within the sequence, and y} is the jth pixel value in the sequence. The integral of the function cp(t) may be given by
Figure imgf000021_0001
and the computer means may provide a representation of the integral in analytical form. The computer means may be arranged to determine the cost function as a weighted sum of a measure of difference between the cumulative sum of pixel values and the function integral, and a measure of difference between the pixel values and the function. For example, the cost function may be determined as
Figure imgf000021_0002
The weights W1 and wp may be adjusted by the computer (or user) to adjust the relative importance of the two parts of the cost function.
The integral of the function is preferably an analytical mathematical expression.
The image pixel values may represent a location containing blood plasma. The computer means may be arranged to use the representative parameters to estimate a measure of the concentration of contrast-enhancing agent within blood plasma of the imaged subject at said location.
At least some of the image pixel values may represent a location within a bolus of contrast-enhancing agent. The first function component containing said representative parameters may represent a concentration of contrast enhancement agent within the bolus.
The first function component may include the term cB(t) given by cB(t) = aBta exp(—μBt) where t represents time, aB and μB are adjustable parameters, and a may have an integer value e.g. of 1 (one), or any other integer (e.g. 2, 3, 4 or 5 etc) , or may be zero.
The first function component may include the term cB(t) given by cB(t) = aB(l-cos(μBt)) where t represents time, aB and μB are adjustable parameters. The time variable is preferably limited to a range of values within one period of the term cos(//βt) , e.g. mtB ≤ t ≤ {m + l)tB where tB=2πμB Λ, and m = 0, 1, 2, 3 ... etc. The third function component may include the term cG(t) given by cG(t) = aG exp(-μGt) where t represents time, aG and μG are adjustable parameters.
The function may be given by cp(t)= cB(t)+ cB(t)®G(t) where <8> represents a convolution operation. The computer means may be arranged to use the function cp(t) and/or the representative parameters to estimate a measure of the concentration ct{t) of the image-contrast enhancing agent within tissue in the body of the imaged subject. For example, the computer means may be arranged to enable the function and/or parameters may be used to describe the leakage of contrast agent into the extracellular- extravascular space (EES) of the imaged tissues. The computer means may be arranged to provide a representation of a further function ct(t) , and may be arranged to use the function as a component of the further function. The computer means may be arranged to use the further function c,(t) in a representation of the concentration of image-contrast enhancing agent within tissue in the body of the imaged subject. The further function may be of the form: c,(0 ="^,(0+^(0®A(O where h (t) is preferably an analytical mathematical function representative of the mechanism (s) for propagation of contrast agent within the imaged tissue (e.g. a tissue residue function) . The computer means may
be arranged to provide the parameter vp may be an
adjustable parameter. The function h (t) may contain adjustable parameters, and may take the form:
Figure imgf000024_0001
trans 1 where K (min~ ) may be provided as representative of the volume transfer constant between the blood plasma and
-1 the EES, and kep (min ) may be provided as representative of the rate constant between the EES and the blood plasma. The computer means may be arranged to provide a value of the adjustable parameter vP which may be representative of the proportion of plasma present (the "plasma fraction") . The computer means may be arranged to determine an estimate of the fraction of contrast agent trans in the EES by determining ve=K /kep. The computer means may be arranged to estimate any one or more of the above kinetic or physiological measures using the values of the associated representative parameters. The computer means
may be arranged to fit the further function ct(t) to a
temporal sequence of image pixel values of imaged tissue of the subject (e.g. consecutive pixel brightness values associated with a tissue region undergoing changing levels of contrast agent concentration) in order to determine the representative parameter values (e.g. being those associated with the optimal fit of the further function to observed data) .
In any of the above aspects, the pixel values to which functional forms may be fitted may be determined according to the acquired radiological (e.g. NMR) signal intensity converted to contrast agent concentration using the method of Wang et al . Magn. Reson. Med. 5(5), (1987) pp399-416. Methods other than that of Wang et al may be used for this purpose. The aspects described herein are suitable for use in analysis of images acquired by nuclear magnetic resonance imaging, CT imaging, PET imaging or any other image acquisition method in which image contrast-enhancing agents may be' used.
In any of its aspects, the third function component (e.g. BTF) may be given by:
Figure imgf000025_0001
where i,j=l, 2, 3... denotes the ith or jth term in the sum of terms, and a^ , τ£( and /4° are parameters adjustable to be representative of recirculation of the bolus, and
OQ and μ^ are parameters adjustable to be representative of equilibration, renal excretion or any other processes. Any of the amplitude terms a^ or a^ may be set to zero as desired.
There now follow examples of the invention described with reference to the accompanying drawings of which:
Figure 1 illustrates graphically the form of VIFs (left panel) , and both the integral of the VIFs over time (right panel) ; Figure 2 illustrates graphically the form of VIFs (left panel) , and both the integral of an analytical VIF together with a cumulative sum of pixel values (right panel) ;
Figure 3 illustrates four tissue kinetic parameter maps for image data of a subject containing a primary bladder tumour;
Figure 4 illustrates apparatus for determining kinetic parameters from image pixel data.
Vascular Input Function:
After a bolus of image contrast-enhancing agent
("contrast agent") is injected in to a peripheral vein of a subject to be imaged, the bolus passes through the cardio-pulmonary system. The bolus is then transported to the arterial side of all organs, including the imaged region, so that an element of the shape of the required input function is the bolus shape as it enters the imaged region, denoted cB(t) . As the bolus travels through the tissues, some contrast agent generally leaks from the bolus, and the network of capillaries tends to delay and disperse the bolus.
This process mixes the bolus of contrast agent with the entire blood pool due to continual recirculation. Transfer of contrast agent from the plasma into the whole body leakage space eventually leads to an equilibrium concentration in the blood plasma. These processes of recirculation, mixing and leakage predominantly occur over timescales below 10-20 minutes. At the same time, renal excretion permanently removes contrast agent from the plasma pool. However, this process generally happens more slowly, e.g. at a rate equivalent to a concentration attenuation with a half life of around an hour. All these effects are represented by a body transfer function (BTF) denoted G(t). The function driving this process is the shape of the bolus of contrast agent for the imaged region, cB(t). The concentration of contrast agent in the blood plasma cP{t) may then be represented by a superposition of the bolus shape and its shape after some modification by the body transfer function, that is:
cp(t)= cB(t)+ cB(t)<8>G(t) (1)
where <8> represents a convolution operation.
Three different examples for the vascular input function
(Cp(t)) are described in detail below, and of great importance is that all three give relatively simple analytic forms for the plasma concentration, as are the resulting functions representing tissue concentration derived. from the VIFs. A brief discussion of more complex models that have greater realism, while maintaining analytic tractability is also given.
VIF #1:
Consider using cB{t)= aBexp(-μBt) and G(t)= aGexp(-μGt) . This describes the bolus with an exponential, and the BTF can be interpreted as a two-compartment model (the blood plasma and extracellular-extravascular space (EES) of the whole body) with transfer rate μG. The resulting input function is:
Cp(0 = AB exp(-/V) + AG exp(-/V) ( 2 ) with AB = aB-aBaG/ ( μBG) and AQ = aBaG/ ( μBG) •
VIF #2 :
Another choice is to use cB(t)= aBtexp(-μBt) for the bolus model, with the property that cB(0) = 0, so the input function is continuous at t = 0. With G(t)= aGexp(-//Gt) for the BTF this leads to:
Figure imgf000029_0002
with AB = aB-aBaG/ { μBc) and AQ = aBaG/ { μBG) .
VIF #3 :
A limitation of the previous model is that although the curve is continuous, the gradient is not continuous at t = 0. A solution is to use a raised cosine to represent the shape of the bolus, of the form:
Figure imgf000029_0001
With G(t) = aGexp(-μGt) for the BTF this leads to:
Figure imgf000030_0002
where f { t, μG) is defined by :
Figure imgf000030_0001
The components of the function are relatively simple, and the resulting equations only involve simple mathematical functions that are easy to compute.
Other VIFs: The three VIFs (cP(t)) described above have the advantage that they have relatively simple algebraic forms. A generalisation of the first function component cB(t) describing the shape of the bolus is to use a gamma- a variate function of the form cB(t)= aBt exp(-μBt) . The additional α term gives increased flexibility in choosing the representation of the bolus shape, particularly the initial rise of the contrast agent concentration through the bolus. Algebraic solutions exist for cP(t) when the term a is an integer, and these involve sums containing at least (α+1) terms to be summed, while for general values (including non-integer) of the term α, the solution for cP{t) involves using special mathematical functions, which are available as (computationally expensive) library functions. The advantage of the raised cosine in VIF #3 is to achieve a similar bolus shape to this model with α>l, but to avoid the need for large summations or special functions.
Generalisations of the BTF can be used to model the other processes mentioned above.
Examples of analytical mathematical functions are described below in terns of cosine bolus models and gamma- function bolus models, such models may use the following step function explicitly wherever it is suitable to do so:
Figure imgf000031_0001
According to a raised cosine bolus model, the bolus is modelled with one complete cycle of a raised cosine function, as follows: B(t;μ) = (1-cosOO)(s(t)-s(t-tB)), where tB = 2πμ .
The convolution of a bolus model and an exponential function may serve as the main template function used to construct the input function and tissue function. It can be evaluated for small t and with κ = 0 , which is ensured by the form used for the helper function /|() given below:
Figure imgf000032_0001
The function /JQ is given by:
Figure imgf000032_0002
This form is preferable to avoid problems with numerical underflow. The first case for /J(-) listed above is the basic definition of the function, and the other three cases listed below the first case are formed from combinations of the following taylor-series
approximations , The
Figure imgf000032_0003
threshold ε, is preferably set according to the numerical precision being used for the computations, and for floating point calculations (e.g. using IDL), e,= 2xlO~2 is appropriate. When κ = 0 and |μ/|>£j, the second listed of the above-listed cases of the expression for _/j(-) may be used. When this is evaluated it may be reduced to t—μ sin(μt) , which will give the correct numerical result.
The convolution of a raised cosine model with gamma form may serve as an alternative template function used to construct the tissue function when one of the input function parameters or is (or is substantially) equal to one of the leakage parameters. The convulusion is:
Figure imgf000033_0001
10 where
Figure imgf000033_0003
The function /2(-) is given by :
Figure imgf000033_0002
25 This form is preferable to avoid problems with numerical underflow, and mirrors the definition of _/J(-) . For floating point calculations (e.g. using IDL), ε2=8xl(T2 is appropriate. This function also reduces to the correct form when K = 0. A St. Lawrence & Lee model may be employed whereby the input function is comprised as follows.
The bolus model may be cB(t) = aBB(t;μB) and the body transfer
function may be G(t) = aGe μ° -s(t) , so the input function is given by
cp(t) = cB{t) +cB{t)®G(O = aBB(t;μB)+aBacE(t;μBc).
For the St Lawrence & Lee model the tissue residue function may be given by
R(t) = F-(s(t)-s(t-Tc))+EfF-c'k'Λ'-τ^ .S(t-Tc),
Where F is an adjustable parameter quantifying blood flow rate (ml/lOOg/min) , Ef is a parameter quantifying the extraction fraction (no units), kep is the return rate constant (min"1) and Tc is the capilliary transit time (min) . The tissue residue function can be considered as a sum of three exponentials with rates 0 , 0 and k respectively and delays 0 , Tc and Tc . In general, if the tissue residue function is R(t) , then the equation for the tissue curve may be given by
ct(t) = cp{t)®R{t) =cB(t)®R{t)+cB(t)®G{t)®R(t).
The first term in the equation for the tissue curve can be written:
cB(t)®R(t) = aBF-E(t;μB,O)-aBF-E(t-TcB,O)+aBEfF-E(t-TcB,k).
The second term of the equation for the tissue curve can be considered in two stages.
The second part of the second term in the equation for the tissue curve can be written:
Figure imgf000035_0002
Figure imgf000035_0001
The whole of the second term in the equation for the tissue curve can then be written:
Figure imgf000036_0001
These terms may be combined, and similar template functions collected together to give:
Figure imgf000036_0002
By writing the function in this way it is possible to determine when numerical underflow may occur. The first two lines compute the difference between two template functions whose arguments differ only by a delay of Tc . If Tc is very small then this will cause underflow problems, which can be avoided by placing a lower-bound on Tc . For floating point calculations (e.g. IDL) a lower limit of lCr3 is appropriate. The third line will experience underflow problems when kep∞μG. These terms are generated
by the convolution of e ""' and e μ°' which come from the tissue residue function and the body transfer function respectively. If μG =kep then the convolution of these
terms gives te v , which can be used to provide an alternative form that avoids numerical underflow. By transforming the parameters to the dimensionless quantities μct and kept , it can be shown that the appropriate threshold is
Figure imgf000037_0001
, when the third line should be replaced with
-aBaGEfF■D(t -TcB,kep) .
The following describes calculations involving a gamma function bolus representation according to an example of the invention.
The bolus model is a gamma variate function with integer exponent (the integer exponent m is analogous to the integer exponent α referred to elsewhere herein) ,
Figure imgf000037_0002
Convolution of this with an exponential has an analytic form,
Figure imgf000037_0003
Figure imgf000038_0001
Computation of E{t;μ,κ) may be performed as follows.
To accurately compute this function for a range of input parameters it is preferable to construct various alternative functions that will compute correctly for large or small values. To reduce the effect of large values one may initially compute the logarithm of the function, where for t>0 we obtain
logE(t;μ,κ) = log(m!)+(m+1)log(t)-μt+fm(t(μ-K)).
The helper function fm(-) is defined by
Figure imgf000038_0002
and the ancillary parameters εm, L1n and Z1n are defined in the following table. The values in this table are designed to give a result that has a fractional accuracy of 10~6 , and the result may be accurate over a large dynamic range of t, μ and K. Importantly, the special case μ=κ may be accurately computed.
Figure imgf000039_0002
computation of E(t;μ,κ)
The form of the helper function is preferred to avoid problems with numerical underflow, overflow and division by zero. A particularly important case when this could occur is with μ = κ, so z = 0. In this case /m(-) may be evaluated via
Figure imgf000039_0001
, so the final computation may be correctly computed without division by zero. Another case when z = 0 is when t = 0, but this is easily handled as the final result can be directly set to zero.
The thresholds εm are preferably chosen to ensure that the direct form of the equation, αm(z) , is only used when the result will not suffer from underflow. This is caused by the difference between e and the summation in the expression for otm(z) underflowing the machine precision, which happens when IzI is small. The summation limits L are preferably chosen to ensure the alternative form βm(z) uses sufficient terms to be accurate -- the exact, but impractical choice is L1n = oo . The upper limits Zm are preferable so that the ez term in ocm(z) does not overflow for large positive z , when the alternative 7m(z) expression is used. For large negative z , the expression for a m(z) may preferaby be used, and although the computation of ez may suffer from underflow, the result may still be accurate.
Firstly one may preferably choose the thresholds to ensure cem(z) is accurately computed. Underflow may affect the computation of the second logarithm term in the definition of otm(z) , which for large positive z tends towards ez , and for large negative z tends towards zmlm\ . These limiting functions may be accurately computed for suitably large \z\, so thresholds εm preferably exist such that ocm{z) is accurately computed for \z\>εm. To choose the thresholds note that for |z|<l,
Figure imgf000040_0001
The approximation may be justified because when |z|<l, |z"/n!| is a strictly decreasing series for all n>0, and the higher order terms in the infinite summation may be neglected. Numerical underflow can occur when the result of the calculation is small with respect to the two subtracted terms, that is when | z\m+x /(m+l)!< ez (or the summation). This may occur when |z|<l, which implies e'ssl, so numerical underflow may be identified simply by |z|m+I /(m+1)!. The thresholds can be defined by
Figure imgf000041_0001
, where εf is preferably chosen to be larger than the floating-point precision of the computations. The following table uses ε/=l(r5 , and gives thresholds and values of am(z) for z = ±εm.
Figure imgf000041_0002
Since all εm are less than 1 the decreasing property of the series given earlier holds. The computed values of α.(±εj are all close to ±εf as intended, so these may all be accurately computed if the machine precision is better than εf . The modulus operations in the definition of ccm(-) are preferable because μ<κ gives z<0, so the logarithms may otherwise not be correctly computed. However, note that
Figure imgf000042_0001
since the argument of the final logarithm is always positive for all real z .
With these thresholds one may define upper limits for the summation in βm(z) that prefereably ensure the truncation error is negligible. Since all the thresholds are less than unity, the summation series is decreasing, so L1n may be defined to ensure that the largest truncated term of the series is smaller than the largest term in the series by an appropriate fraction. Thus;
Figure imgf000042_0002
for \z\<εm, where εt is the chosen truncation error. The left-hand side (LHS) of this inequality is largest when Z | == εm , so using this value of z in the expression, and substituting εf , this equation becomes
Figure imgf000043_0002
One may tabulate the LHS for different L1n and select the smallest L1n that satisfies the inequality for a given ε, .
The following table gives values of
Figure imgf000043_0001
as before. For ε, =10~6, tabulated values below 10~" are therefore preferably deemed as having acceptable L1n .
Figure imgf000044_0002
The upper thresholds Zm may be be derived by finding solutions to the equation
Figure imgf000044_0001
as this is the fractional truncation error committed by neglecting the summation in the expression for &m{z) . As before one may employ εr=10~6, and the solutions are given in table 1. A formula for the computation of the convolution of the bolus with te " is .
Figure imgf000045_0001
To accurately compute D{t;μ,κ) for a range of input parameters it is preferable to construct various alternative functions that will compute correctly for large or small values. To reduce the effect of large values one may compute the logarithm of the function, where for t>0 we obtain
logD(t;μ,κ) = log(m!)+(m+2)log(t) -μt+gm(t(μ-K)).
The helper function g1 (•) is defined by
Figure imgf000045_0002
and the ancillary parameters are defined in the following table. The values in this table are designed to give a result that has a fractional accuracy of 10~6 , and the result is accurate over a large dynamic range of t, μ and K. Importantly, the special case μ = κ will be accurately computed.
Figure imgf000046_0002
Table 2: Values of ancillary parameters for the computation of G(t;μ,κ)
The thresholds and summation limits are deduced in the same way as described above. The bracketed term in the expression for <5m(-) can be manipulated to give
Figure imgf000046_0001
The terms in the right-hand side (RHS) have decreasing magnitude when |z|<l since /n>0 and n>m+2. So for |z|<l this expression can be approximated by the largest term in the series, that is zm+2/(w+2)! . Underflow problems may occur when the result is much smaller than the subtracted terms, i.e. when Since this may
Figure imgf000047_0003
occur when the thresholds can be defined via
Figure imgf000047_0004
Figure imgf000047_0001
and this results in the following thresholds.
Figure imgf000047_0005
These thresholds are all less than one, so the decreasing property of the series holds meaning that the various approximations are appropriate. From the design of these thresholds 17m(±εm) \∞(m+\)εf , and the above table demonstrates that this approximation is accurate. With these thresholds it is possible to specify the summation limits in ξm(z) . The ratio of the largest term to the largest truncated term in cω IS
and if this ratio is less
Figure imgf000047_0002
than ε, at z = εm, then this is equivalent to
{Lm-m)εm £m_+!l(Lm-\-\)\<εtεf . The following table gives the LHS
of this inequality for
Figure imgf000048_0001
and so tabulated values below 10 give acceptable L1n .
Figure imgf000048_0003
The upper thresholds Zm can be derived by finding solutions to the equation
Figure imgf000048_0002
10 as this is the fractional truncation error committed by neglecting the summation in the expression for δm{z) . As before one may use ε, =10~6, and the solutions are given in
table 1.
Contrast Agent Concentration in Tissue:
With the VIF provided in a representative analytical form, it may be used to generate a measure of a concentration of a contrast agent in a tissue of the imaged subject.
The extended-Kety model (Kety S. Pharmacol . Rev. 3,
(1951), ppl-41; Tofts P. J. Magn . Reson. Imag. 7, (1997), pp91-101) may be used to describe the leakage of contrast agent into the extracellular-extravascular space (EES) of the imaged tissues, and takes the form
c, (/) = vpcp (0 + cp (0 <8> {K'rαm exp(-kept)}
trans 1 where K (min~ ) is the volume transfer constant between
the blood plasma and the EES, kep (min ) is the rate constant between the EES and the blood plasma and vP is the proportion of plasma present (the "plasma fraction") . The fraction of contrast agent in the EES is given by trans ve=K /kep < 1. For the input functions described above, the tissue concentration is given explicitly for VIF #1 by:
Figure imgf000050_0001
Figure imgf000050_0002
The equations for VIF #2 are given by: c Xt) = vp[ABtQxp{-μBt) + 4;(exp(-/iG0 - exp(-μBt))]
Figure imgf000050_0003
The equations for VIF #3 are given by (equation 8):
Figure imgf000050_0004
and, for t>tE
Figure imgf000050_0005
where
Figure imgf000050_0006
and where cp(t) is given by equation (4) . Special forms of these expressions which arise when kep μB or μG are given by the following.
When kep = μB then:
VIF #1:
Figure imgf000051_0001
VIF #2:
Figure imgf000051_0002
VIF #3: Unchanged.
When kep = μG then: VIF #1:
Figure imgf000051_0003
VIF #2:
Figure imgf000051_0004
Figure imgf000052_0001
VIF # 3 :
Figure imgf000052_0002
VIF Evaluation :
VIF #2 and #3 are more appealing than VI F # 1 because for both the initial phase of the bolus rises from zero , rather than j umping abruptly ( see figure 1 ) . However , it is instructive to quantitatively determine how this difference affects the tissue parameter estimates , and this is done by means of a simulation-based experiment .
Evaluation via Simulated Data:
Data were simulated using a population-based input function, obtained from a cohort of patients undergoing DCE-MRI examinations (Parker et al. Magn. Reson. Med. 45, (2006), pp993-1000) shown in figure 1. Test data were generated from these curves using: y. = c,(nT- to) + εH
for n =0, 1, ..., N, where ct(...) is the simulated tissue curve, T is the sampling interval, to is the bolus arrival
time, and εn is a Gaussian-distributed random sample with
2 variance σ . Eight simulation scenarios were considered, trans , using combinations of K e{0.1, 0.4} min , vee{0.2, 0.6} and vpe{0, 0.05}, and 2000 data sets were simulated for each case. The other parameters were σ =0.02 mM, T=3/60 min, N=60, and to=13.5/6O min, which were chosen to reflect those in a typical fast imaging sequence capable of observing the first-pass of an injected bolus.
For each data set, estimates of the tissue parameters were obtained for each of the proposed vascular input functions using equations (6), (7) and (8) in a least- squares fitting routine, which also included the onset time to as a fit parameter. The value of the parameter vp was constrained within the fitting routine to be above 0 (zero) since this parameter cannot physically be
2 negative. In each case a p-value was computed using a χ - statistic of the form:
Figure imgf000053_0001
where yn are the predicted measurements using the least-
squares estimate, and there are N-4 degrees of freedom.
2 If the residuals are genuinely Gaussian with variance σ , then the expected p-value is 0.5, and typically a threshold of p<0.001 is used to reject implausible VIFs. Parameters for the proposed input functions were obtained by least-squares fitting the time-integral of the population input function to the time-integral of each of the proposed input function models over the same range as the test data, that is te [0, 3] . The time-integral of the population input function was obtained by numerical integration, and the corresponding integrals for the proposed VIFs by analytic integration of equations (2), (3) and (4) . Included in the fit was an additional time- offset parameter to account for the fact that the peak of the bolus shape in the input function is not at t=0. These curves are shown in figure 1, along with the time- integrals, and the estimated parameter values detailed in table 1. The table also details the corresponding amplitude parameters (aB and aG) for the first function component (bolus shape) and the third function component (BTF) of the two models, aB and aG. The BTF parameters A6 and μG are very similar for all three models, which is not surprising since the form of the BTF is the same in each case. The total area under the bolus is aB/μB=0.863 for VIF #1, aB/(μB) =0.848 for VIF #2 and aBB=0.782 for VIF #3. If the first function component (cB(t)) is interpreted as a distribution over arrival times, then
-1 the mean arrival time is μ + t0 = 0.187 for VIF #1,
2μ + to = 0.179 for VIF #2, and 0.5μ + t0 = 0.141 for VIF #3, which again are similar. These similarities are reflected in the very close agreement between ' the time- integrals as shown in the right-hand panel of figure 1.
In figure 1, in both panels the black dash-dot line is the population derived input function, the gray dashed line is VIF #1, the solid black line is VIF #2, and the solid gray line is VIF #3. The left panel shows the curves cp(t), the right panel shows the time-integral of the curves, and in both panels all three are virtually identical after t=l sec.
Table 1. Estimated Input Function Parameters, including to, the time-offset for the fit. Note that the units on aB and AB are different because of the different model forms.
Figure imgf000055_0001
The overall objective of fitting the VIF to the image pixel sequence is to fit a given VIF (vascular input function) to noisy data. The fitted curves and pixel data each consist of an initial period with zero concentration followed by a short peak (due to the bolus) and a longer period of gradually decreasing concentration, as shown in figures 1 and 2.
In principle, standard nonlinear least-squares fitting methods can be used to give estimates of the model parameters by directly fitting the VIF curve to the data. However, with current time-resolution limits on the data acquisition hardware (particularly with MR imaging systems) , the bolus is often only observed at one or two time points. Since the VIF model typically has two (or more) parameters to define the bolus, if there are two data points for the bolus there will be a parameter set that matches the data. However, the resulting curve is often implausible - usually the peak of the curve comes between the two data points, and is much too high.
The solution employed here is to fit the integral of the VIF model curve to the cumulative sum of the pixel data using a least-squares method. This tends to give more plausible results because the fitting is driven by the area and duration of the part of the data dominated by the bolus, rather than the amplitude and duration of that part. The procedure is mathematically described below.
If cp{t,φ) is the "true" VIF parameterised by φ, then the data yn acquired at times tn are modelled with
Figure imgf000057_0001
where εn are (unknown) error terms and n = 1, 2, ... N. The cumulative sums of the data are given by
Figure imgf000057_0003
for n = 1 , 2 , ... N, and the integrated VI F is given by
Figure imgf000057_0002
Depending on the choice of cp{t,φ), C,(t,φ) may be available analytically. The fitting process uses a cost function of the form
Figure imgf000058_0001
Standard algorithms are used to find the φ that minimises χ(φ) . Another possibility is to use a cost function that combines both the original data and the cumulative data, that is
Figure imgf000058_0002
The weights W1 and wp are used to adjust the relative importance of the two parts of the cost function.
Simulation Results:
Table 2 shows mean values for the parameter estimates over the 2000 data sets for each scenario described in the previous section. Uncertainties are given as plus/minus two standard deviations, and the average p-
2 value for the χ -statistic is given for each case. For the cases with vp=0 the parameter estimates have very little bias, while the average p-values indicate that the VIF fits are indistinguishable from what one would expect with the true VIF (i.e. using the population input function).
Table 2. Mean parameter estimates and p-values for eight test scenarios. Uncertainties are plus/minis two standard deviations .
Figure imgf000059_0001
When Vp=O.05, vif #1 gives biassed estimates, particularly for Vp, and the low p-values indicate that in this context a bi-exponential input function is distinguishable from the population input function. This is not surprising since the shape of the bi-exponential input function is very different from the population input function. However, for VIF #2 the bias is much reduced - the two standard deviation interval contains the true value in every case. The average p-value is distinctly less than 0.5, but is sufficiently large to suggest that statistically, VIF #2 is little different from the population input function in this context. For VIF #3 the bias is similar to VIF #2, though the variance is generally slightly smaller. However, the p-values suggest that VIF #3 is statistically indistinguishable from the population input function in this context.
The average time taken to compute the least-squares estimates of the tissue curves (ct(t)) for the three VIFs was also measured - VIF #1 was the fastest, VIF #2 took 10% longer than VIF #1 and VIF # 3 took 50% longer than VIF #1. However, the average time taken to find the least- squared estimates with vp =0.05 was fastest for VIF #2, VIF #3 took 3% longer than VIF #2, and VIF #1 took 30% longer than VIF #2. This seemingly paradoxical result may be because VIF #1 is not very similar to the true model, so the least-squares cost function is likely to be non- quadratic and therefore requires more iterations to find the minimum. For VIF #3, since it is very similar to the true VIF, the least-squares cost function is likely to be nearly quadratic, and so the minimum will be found in very few iterations, which offsets the additional time required to compute the tissue curves.
In-v±vo Example :
The simulations suggest that VIF #2 is a reasonable compromise between statistical accuracy and model complexity. Therefore, an example is given of the application of VIF #2 to some in-vivo data taken from a patient with a bladder carcinoma. The dynamic data for this study were obtained using a Siemens Avanto, and consisted of 70 dynamic measurements acquired every 5.6s using a 3D spoiled gradient-echo sequence during shallow breathing. Magnevist contrast agent (relaxivity of 4.26
-1 -1 s mM ) was administered using a power injector with a dose of O.lmmol/kg body weight, and the imaging parameters were TR/TE = 4.36/1.34ms, α = 24°, 256x256
interpolated matrix size, 12 slices, 5mm slice thickness, 1 acquisition. The acquired signal intensity was converted to contrast agent concentration using the method of Wang et al. Magn. Reson. Med. 5(5), (1987) pp399-416.
Parameters for the input function #2 were obtained using data taken from the femoral artery. A sequence of the values of the pixel with the highest peak concentration was used, and this sequence is shown with the fitted input function (cp(t)) in the left panel of figure 2. As with the input functions for the simulation, the input function parameters (including an onset-time parameter) were derived by least-squares fitting the integral of the input function to the cumulative sum of the data.
In figure 2, the left panel shows the data (dots) taken from the femoral artery, and the fitted input function curve (solid line) . For reference the population input function is also shown (dashed line) . The right panel shows the cumulative sum of the data (dots) and the curve used to generate the fits, which is the integral of the input function #2.
The fitted curve and cumulative sum are shown in the right panel of figure 2, and the parameters given in table 3.
Table 3. Estimated Input Function Parameters
Figure imgf000062_0001
Fitting to the cumulative sum of the data tends to be more stable since the noise is smoothed by this process, and also because the parameters for the first function component cB(t) (bolus model) are forced to match the corresponding area under the data, rather than the data points themselves. This is particularly beneficial in this example as there are two parameters in the model that define the bolus, and only two data points acquired during the bolus passage.
The parameters that best fit the original data will therefore be able to match the two first-pass data points, but the resulting input function is then unrealistic. In this example, fitting the input function directly to the data in the left panel of figure 2 gives an input function with a bolus area 90% larger than the fit shown in the figure, and a peak bolus amplitude of 52.9 mM, which is physiologically implausible. This fit is not shown on the figure as the rest of the curves would not be visible. For reference, the figure also shows the population input function, where it is clear that for this patient, the overall input function amplitude is about twice the population average.
Figure 3 shows estimated representative parameter maps for four regions of interest (ROI) each indicated by an arrow and superimposed on an anatomical Tl-weighted image. Together, the four ROIs contained 3456 pixels, and the combined execution time was 41 seconds using a Pentium 4, 3.4GHz processor with IGB RAM running WindowsXP Professional. The centrally placed ROI is a primary bladder carcinoma, the ROI in the top right of the image is a malignant or involved lymph-node, and the two gluteal muscles are included to give some estimates that can be compared to literature values. The proportion of pixels from which estimates were successfully obtained are 463/474 = 98% for the tumour ROI, 237/253 = 94% for the lymph-node ROI and 2637/2729 = 97% for the muscle ROIs. An unsuccessful fit was defined as one where ve>l or where the least-squares minimisation routine (e.g. a Levenburg-Marquardt algorithm implemented in IDL) failed to converge.
In figure 3, tissue kinetic parameter maps are shown for a data set containing a primary bladder tumour and a malignant or involved lymph-node. The two ROIs near the bottom of the images are the gluteal muscles, and the tone-scale bars at the right-hand edge of each figure panel show the numerical tone scaling for each parameter. Table 4 gives summary of statistics for the representative parameter estimates for the successful fits in the four ROIs. Of particular note is the plasma fraction in the two tumour regions with median values of 4% for the bladder tumour and 2% for the lymph-node. The simulations indicate that (contingent on the input function being appropriate) these values are reliable with VIF #2 (and VIF #3), but that VIF #1 would give biassed estimates. The plasma fraction is very small in the muscle, and this is as expected for resting muscle.
Table 4. Statistics for in-vivo parameter estimates from three regions using VIF #2 and the parameters in table 3.
Figure imgf000065_0001
The median ve for the two muscle ROIs is 0.084, which
agrees well with expected values and the median K is
-1
0.027 min which is within the expected range for muscle. The spread of ve estimates in both tumours is quite large, which is to be expected due to the chaotic nature of tumour anatomy.
Figure 4 schematically illustrates apparatus for estimating a measure of concentration of contrast agent within the body of an imaged subject 11. An image acquisition device (such as an NMR scanner) 10 acquires image data of a region of the body of the subject 11 as a time sequence of successive images of the region within which concentration levels of contrast agent vary. The image data 12 is input to a computer 13 for analysis.
The computer 13 includes a storage device 14 arranged to store image data generated by the imaging apparatus 10. The image data received by the computer may be received directly from the image generator or may be received as pre-stored image data 16 input to the computer via an external data storage device 20 in which previously acquired image data 22 was stored for subsequent input to the computer.
The computer includes a processing unit 15 arranged or programmed to implement the method described above. The processing unit is operably connected to the data store 14 via a data transfer link 18 via which image data is passed to the processor unit. Parameter values determined by the processor unit, according to the methodology described above, are transmittable from the processor unit to the memory store via a data transfer link 17. Stored parameter values calculated by the processor unit 15 may then be passed to a user input/output device and/or graphical interface unit 21 in order to be communicated to the user (e.g. graphic biological data 19) . In addition to, or as an alternative to, the input of image data 16 via a remote storage device 20, representative parameter values associated with a vascular input function may be input to the computer as input data for use, according to a methodology described above, in generating estimates of kinetic parameters associated with contrast agent concentration levels in tissue of the imaged subject. Accordingly, the processor unit 15 may be arranged or programmed to implement such methods as described above, and as illustrated in Figures 1 to 3 herein.
The processor unit is programmed, or arranged, to provide a desired VIF and/or a function ct(t) representative of a concentration of contract agent in imaged tissue, as desired, with adjustable parameters. The processor unit is arranged to fit the VIF or ct(t) to input image data as described above to generate representative parameter values and/or estimates of kinetic parameters associated with the imaged subject.
The examples described above are intended to be non- limiting and modification or variants such as would be readily apparent to the skilled person are encompassed by the invention.

Claims

CLAIMS :
1. A method for estimating a measure of the concentration of an image contrast-enhancing agent within an imaged subject including; providing an analytical mathematical function comprising function components and including a sum of a first function component and a second function component in which the second function component includes a convolution of the first function component with a third function component, wherein each function component includes one or more adjustable parameters; adjusting the numerical value of adjustable ' parameters of the function to fit the function to a sequence of values of an image pixel representing a location in the imaged subject at each of a succession of times thereby to determine values for said parameters representative of the sequence; using the representative parameters to estimate a measure of the concentration of the image contrast-enhancing agent within the imaged subject.
2. A method according to any preceding claim including providing the integral of the function, determining values for a cumulative sum of the sequence of pixel values, adjusting the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum, and determining the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum.
3. A method according to Claim 2 including generating a cost function and adjusting the numerical value of adjustable parameters φ of the function to minimise the numerical value of the cost function, where the cost function includes the term χ(φ) given by
Figure imgf000070_0001
where
Figure imgf000070_0002
and C1(J1,φ) is the numerical value of the integral of the function for the time tt within the sequence, and y is the jth pixel value in the sequence.
4. A method according to Claim 2 or 3 in which the integral of the function is an analytical mathematical expression.
5. A method according to any preceding claim in which the image pixel values represent a location containing blood plasma and the method includes using the representative parameters to estimate a measure of the concentration of contrast-enhancing agent within blood plasma of the imaged subject at said location.
6. A method according to any preceding claim in which at least some of the image pixel values represent a, location within a bolus of contrast-enhancing agent and the first function component containing said representative parameters represents a concentration of contrast enhancement agent within the bolus.
7. A method according to any preceding claim in which the first function component includes the term cB(f) given by cB{t) = aBta exp(-μBt) where t represents time, aB and μB are adjustable parameters, and a has integer value or is zero.
8. A method according to any of preceding claims 1 to 6 in which the first function component includes the term cB(t) given by cB(t) = aB(l-cos(juBt)) where t represents time, aB and μB are adjustable parameters.
9. A method according to any preceding claim in which the third function component includes the term cG(t) given by cG(t) = ac exp(-μGt) where t represents time, aG and μG are adjustable parameters.
10. Apparatus for estimating a measure of the concentration of an image contrast-enhancing agent within an imaged subject including; computer means for providing a representation of an analytical mathematical function comprising function components and including a sum of a first function component and a second function component in which the second function component includes a convolution of the first function component with a third function component, wherein each function component includes one or more adjustable parameters; and for receiving a sequence of values of an image pixel representing a location in the imaged subject at each of a succession of times; the computer means being arranged to adjust the numerical value of adjustable parameters of the function to fit the function to the sequence thereby to determine values for said parameters representative of the sequence; the computer means being further arranged to use the representative parameters to estimate a measure of the concentration of the image-contrast enhancing agent within the imaged subject.
11. Apparatus according to Claim 10 in which the computer means is arranged to provide a representation of the integral of the function, to determine values for a cumulative sum of the sequence of pixel values, to adjust the numerical value of adjustable parameters of the function to fit the integral of the function to the cumulative sum, and to determine the representative parameters to be those which optimise the fit of the integral of the function to the cumulative sum.
12. Apparatus according to Claim 11 in which the computer means is arranged to generate a cost function and to adjust the numerical value of adjustable parameters φ of the function to minimise the numerical value of the cost function, where the cost function includes the term χ{φ) given by
Figure imgf000074_0001
where
Figure imgf000074_0002
and Cj(tt,φ) is the numerical value of the integral of the function for the time I1 within the sequence, and y} is the jth pixel value in the sequence.
13. Apparatus according to Claim 11 or 12 in which the integral of the function is an analytical mathematical expression.
14. Apparatus according to any of claims 10 to 13 in which the image pixel values represent a location containing blood plasma and the computer means is arranged to use the representative parameters to estimate a measure of the concentration of contrast- enhancing agent within blood plasma of the imaged subject at said location.
15. Apparatus according to any of claims 10 to 14 in which at least some of the image pixel values represent a location within a bolus of contrast- enhancing agent and the first function component containing said representative parameters represents a concentration of contrast enhancement agent within the bolus.
16. Apparatus according to any of claims 10 to 15 in which the first function component includes the term cB(t) given by cB(t) = aBta exp(-μBt) where t represents time, aB and μB are adjustable parameters, and a has integer value or is zero.
17. Apparatus according to any of claims 10 to 16 in which the first function component includes the term cB(t) given by cB{t) = aB(l - cos(μBt)) where t represents time, aB and μB are adjustable parameters .
18. Apparatus according to any of claims 10 to 17 in which the third function component includes the term cG(t) given by cG(t) = aG exp(-μGt) where t represents time, aG and μG are adjustable parameters .
19. Apparatus according to any one of preceding claims 10 to 20 including a computer means programmed to perform the method according to any one of claims 1 to 9.
20. A computer means programmed to perform the method of any one of claims 1 to 9.
21. A computer program product containing a computer program for performing the method of any one of claims 1 to 9.
22. A computer program for performing the method of any one of claims 1 to 9.
23. A method substantially as described in any one embodiment hereinbefore with reference to the accompanying drawings .
24. Apparatus substantially as described in any one embodiment hereinbefore with reference to the accompanying drawings .
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