WO2008047198A1 - Therapeutic pyrazolyl thienopyridines - Google Patents
Therapeutic pyrazolyl thienopyridines Download PDFInfo
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- WO2008047198A1 WO2008047198A1 PCT/IB2007/002994 IB2007002994W WO2008047198A1 WO 2008047198 A1 WO2008047198 A1 WO 2008047198A1 IB 2007002994 W IB2007002994 W IB 2007002994W WO 2008047198 A1 WO2008047198 A1 WO 2008047198A1
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- MHHYZOIPYYNHIX-UHFFFAOYSA-N CCc(cc1-c2cc3cnccc3[s]2)n[n]1-c1nc(C)ccc1 Chemical compound CCc(cc1-c2cc3cnccc3[s]2)n[n]1-c1nc(C)ccc1 MHHYZOIPYYNHIX-UHFFFAOYSA-N 0.000 description 1
- NIQVUPWBHUGPKD-UHFFFAOYSA-N CCc1c(-c2cc3cnccc3[s]2)[n](-c2nc(C)ccc2)nc1 Chemical compound CCc1c(-c2cc3cnccc3[s]2)[n](-c2nc(C)ccc2)nc1 NIQVUPWBHUGPKD-UHFFFAOYSA-N 0.000 description 1
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D495/00—Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms
- C07D495/02—Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms in which the condensed system contains two hetero rings
- C07D495/04—Ortho-condensed systems
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K9/00—Medicinal preparations characterised by special physical form
- A61K9/0012—Galenical forms characterised by the site of application
- A61K9/0014—Skin, i.e. galenical aspects of topical compositions
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P1/00—Drugs for disorders of the alimentary tract or the digestive system
- A61P1/16—Drugs for disorders of the alimentary tract or the digestive system for liver or gallbladder disorders, e.g. hepatoprotective agents, cholagogues, litholytics
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P11/00—Drugs for disorders of the respiratory system
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P13/00—Drugs for disorders of the urinary system
- A61P13/12—Drugs for disorders of the urinary system of the kidneys
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P17/00—Drugs for dermatological disorders
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P17/00—Drugs for dermatological disorders
- A61P17/02—Drugs for dermatological disorders for treating wounds, ulcers, burns, scars, keloids, or the like
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P25/00—Drugs for disorders of the nervous system
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P35/00—Antineoplastic agents
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P9/00—Drugs for disorders of the cardiovascular system
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/435—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom
- A61K31/4353—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom ortho- or peri-condensed with heterocyclic ring systems
- A61K31/4365—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with one nitrogen as the only ring hetero atom ortho- or peri-condensed with heterocyclic ring systems the heterocyclic ring system having sulfur as a ring hetero atom, e.g. ticlopidine
Definitions
- TGF- ⁇ 's (transforming growth factor- ⁇ 's) activate fibrotic and and tumor-promoting signaling cascades
- TGFp 1 , TGF ⁇ 2 , and TGF ⁇ 3 can activate the TGF ⁇ pathway
- the TGF ⁇ 's bind to and signal through cell surface receptors (see Singh et al (2004) Curr Opin Drug Disc and Dev , 7 437-445)
- a TGF ⁇ first binds to a type Il receptor (T ⁇ RII), which then binds to and phosphorylates a type I receptor (T ⁇ RI) ( ⁇ e , an activin receptor-like kinase (ALK))
- T ⁇ RII type Il receptor
- T ⁇ e an activin receptor-like kinase
- TGFp 1 and TGFp 2 which inhibit the TGF ⁇ pathway can assist in reducing scarring (O'Kane and Ferguson, (1997) lnt J Biochem Cell Biol , 29 63-78) Accordingly, there is an ongoing need in the art for small molecule ALK-5 inhibitors that can be used to reduce scar formation, and for the treatment of other fibrotic conditions, as well as cancer SUMMARY OF THE INVENTION
- the present invention provides for compounds of formula I
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl, a th ⁇ eno[3,2- b]py ⁇ d ⁇ nyl, a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, or a th ⁇ eno[2,3-b]pyr ⁇ d ⁇ nyl, each of which may be optionally substituted with one to three substituents each independently selected from the group consisting of -C-
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl, which may be optionally substituted as specified herein
- the positions of a th ⁇ eno[3,2-c]py ⁇ d ⁇ ne are numbered as follows
- a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl is a monovalent radical of th ⁇ eno[3,2-c]pynd ⁇ ne
- R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 have any of the values specified herein, and wherein the th ⁇ eno[3,2- c] radical is attached at any of positions 2, 3, 4, 6, or 7
- R 1 is a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, which may be optionally substituted as specified
- the positions of a th ⁇ eno[2,3-c]py ⁇ d ⁇ ne are numbered as follows
- a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl is a monovalent radical of th ⁇ eno[2,3-c]py ⁇ d ⁇ ne
- R 1 , R 2 , R 3 , R 4 , R 5 , R ⁇ , and R 7 have any of the values specified herein, and wherein the th ⁇ eno[2,3- c] radical is attached at any of positions 2, 3, 4, 5, or 7
- R 1 is a th ⁇ eno[2,3-b]pyr ⁇ d ⁇ nyl, which may be optionally substituted as specified herein
- the positions of a th ⁇ eno[2,3-b]py ⁇ d ⁇ ne are numbered as follows
- a th ⁇ eno[2,3-b]py ⁇ d ⁇ nyl is a monovalent radical of th ⁇ eno[2,3-c]pyr ⁇ d ⁇ ne
- R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 have any of the values specified herein, and wherein the th ⁇ eno[2,3- b] radical is attached at any of positions 2, 3, 4, 5, or 6
- R 1 is a th ⁇ eno[3,2-b]pyr ⁇ d ⁇ nyl which may be optionally substituted as specified herein
- the positions of a th ⁇ eno[3,2-b]py ⁇ d ⁇ ne are numbered as follows
- th ⁇ eno[3,2-b]pyr ⁇ d ⁇ nyl is a monovalent radical of th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne
- R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 have any of the values specified herein, and wherein the th ⁇ eno[3,2- b] radical is attached at any of positions 2, 3, 5, 6, or 7
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]py ⁇ d ⁇ nyl
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of d-C 3 -alkyl, -(d-dj-alkyO-S-fd-Cs-alkyl), -S-d-C 3 -alkyl, -(d-Cs-alkylKHd-Cs-alkyl), -O- d-C 3 -alkyl, -C(O)0-d-C 3 -alkyl, -C(O)O-H, -C(O)NR 30 R 31 , halo, -CN, -OH, wherein R 30 and R 31 are each independently selected from the group consisting of H, and C 1 -C 3 alkyl-OH, C- ⁇ -C 3 -alkyl, hal
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]py ⁇ d ⁇ nyl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH, Ci-C 3 alkyl, halo, and -0-Ci-C 3 alkyl
- R 2 and R 3 are taken together to form a C 4 -C 6 -cycloalkyl, or a 4-6- membered heterocycloalkyl, wherein said C 4 -C ⁇ -cycloalkyl or 4-6-membered heterocycloalkyl may be optionally substituted with one to three substituents independently selected from oxo and Ci-C 3 alkyl
- R 2 and R 3 are taken together to form a C 5 -cycloalkyl, or a 4-6-membered heterocycloalkyl, wherein said 4-6-membered heterocycloalkyl is selected from the group consisting of a tetrahydrofuranyl, a tetrahydrothienyl, a imidazolidinyl, an oxazolidinyl, an imidazolinyl, an isoxazolidinyl, and a pyrrolidinyl
- R 2 and R 3 are taken together to form a C 4
- a compound of the present invention is (2-(6-methylpyr ⁇ d ⁇ n-2-yl)-2,4,5,6- tetrahydrocyclope ⁇ ta[c]pyrazol-3-yl)th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- a compound of the present invention is 2-(2-(6-methylpy ⁇ d ⁇ n-2-yl)- 2,4,5,6-tetrahydrocyclopenta[c]pyrazol-3-yl)th ⁇ eno[2,3-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- R 2 and R 3 are independently selected from the group consisting of hydrogen, C 1 -
- R 30 and R 31 are each independently selected from the group consisting of H, and Ci-C 3 alkyl
- R 2 and R 3 are independently selected from the group consisting of hydrogen, and Ci-C 3 alkyl
- R 2 is Ci-C 2 alkyl and R 3 is hydrogen
- R 5 , R 6 , and R 7 are H, and R 4 is C ⁇ C ⁇ alkyl In yet other embodiments, R 4 is methyl In certain embodiments, R 5 , R 6 , and R 7 are H, and R 4 is methyl
- R 1 is a th ⁇ eno[3,2-c]py ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]py ⁇ d ⁇ nyl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH, Ci-C 3 alkyl, halo, and -O-Ci-C 3 alkyl
- R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ n-2-yl or a th ⁇ eno[2,3-c]py ⁇ d ⁇ n-2-yl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH 1 Ci-C 3 alkyl, halo, and -0-C 1 -C 3 alkyl
- R 1 is a th ⁇ eno[3,2-c]py ⁇ d ⁇ ne-2-yl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH, C 1 -C 3 alkyl, halo, and -0-C 1 -C 3 alkyl
- R 1 is th ⁇ eno[3,2-c]py ⁇ d ⁇ nyl-2yl
- R 5 , R 6 , and R 7 are H, R 4 is a C ⁇ Ca-alkyl, and R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH, C 1 -C 3 alkyl, halo, and -0-C 1 -C 3 alkyl
- R 5 , R 6 , and R 7 are H, R 4 is methyl, and R 1 is a th ⁇ eno[3,2-c]py ⁇ d ⁇ nyl or a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, which may be optionally substituted with one to three substituents each independently selected from the group consisting of -OH, C 1 -C 3 alkyl, halo, and -0-C 1 -C 3 alkyl
- R 5 , R 6 , and R 7 are H 1 R 4 is methyl, R 1 is a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ nyl, and R 2 and R 3 are independently selected from the group consisting of hydrogen, and Ci-C 3 alkyl
- R 5 , R 8 , and R 7 are H 1 R 4 is methyl, R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ nyl, and R 2 and R 3 are independently selected from the group consisting of hydrogen, and Ci-C 3 alkyl
- R 5 , R 6 , and R 7 are H 1 R 4 is methyl, R 1 is a th ⁇ eno[2,3-c]pyr ⁇ d ⁇ n-2-yl, and R 2 and R 3 are independently selected from the group consisting of hydrogen, and C 1 -C 3 alkyl
- R 5 , R 6 , and R 7 are H, R 4 is methyl, R 1 is a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ n-2-yl, and R 2 and R 3 are independently selected from the group consisting of hydrogen, and C 1 -C 3 alkyl Examples of compounds of formula I include
- Another example of a compound of formula I is 2-[4-methyl-1-(6-methylpy ⁇ d ⁇ n-2-yl)-1H-pyrazol-5- yl]th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, and pharmaceutically acceptable salts thereof
- the compound ⁇ s 2-[4-methyl-1-(6-methylpyr ⁇ d ⁇ n-2-yl)-1H-pyrazol-5-yl]th ⁇ eno[3,2-c]py ⁇ d ⁇ ne
- Another example of a compound of formula I is 2-(4-methyl-1-(6-methylpy ⁇ d ⁇ n-2-yl)-1H-pyrazol-5- yl)th ⁇ eno[2,3-c]py ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- the present invention provides for methods of reducing scar formation, comprising administering to a mammal in need of such treatment a therapeutically effective amount of a compound of formula I 1 or a pharmaceutically acceptable salt thereof
- a compound of formula I is administered topically
- the compound of formula I is 2-
- the present invention provides for methods of reducing existing scars, comprising administering to a mammal in need of such treatment a therapeutically effective amount of a compound of formula I 1 or a pharmaceutically acceptable salt thereof
- 2-[4-methyl-1-(6-methylpyr ⁇ d ⁇ n-2-yl)-1 H-pyrazol-5-yl]th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof may be used in the in the manufacture of a medicament for the inhibition of scar formation
- the present invention provides for methods of treating a TGF ⁇ -mediated conditions, comprising administering to a mammal in need of such treatment a therapeutically effective amount of a compound of formula I 1 or a pharmaceutically acceptable salt thereof
- the TGF ⁇ -mediated condition is selected from the group comprising cancer, breast cancer, lung cancer, colon cancer, prostate cancer, ovarian cancer, pancreatic cancer, melanoma, fibrotic diseases, glomerulonephritis, diabetic nephropathy, hepatic fibrosis, pulmonary fibrosis, arterial hyperplasia, restenosis, scleroderma, and dermal scarring
- the TGF ⁇ -mediated condition is dermal scarring
- the compound of formula I is 2-[4-methyl-1-(6- methylpyr ⁇ d ⁇ n-2-yl)-1H-pyrazol-5-yl]th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- the present invention provides for pharmaceutical compositions comprising a therapeutically effective amount of a compound of formula I and a pharmaceutically acceptable excipient
- the compound of formula I is 2-[4-methyl-1-(6-methylpyr ⁇ d ⁇ n-2-yl)-1H-pyrazol-5- yl]th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- the present invention provides for topical pharmaceutical compositions comprising a therapeutically effective amount of a compound of formula I 1 or pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable excipient suitable for topical application
- the compound of formula I is 2-[4-methyl-1-(6-methylpy ⁇ d ⁇ n-2-yl)-1H-pyrazol-5- yl]th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne, or a pharmaceutically acceptable salt thereof
- the invention is directed to a kit containing at least one of the compounds of the present invention packaged for retail distribution, in association with instructions advising the consumer on howto use the compound to alleviate a TGF ⁇ -mediated condition
- An additional embodiment is directed to the use of a compound as a diagnostic agent to detect inappropriate activation of a TGF ⁇ activated pathway
- a "scar” is a mark that is present after wound repair at the site of a wound
- the term “scar” includes keloid scars hypertrophic scars, and scars that are predominantly not elevated and predominantly do not grow beyond the boundaries of the original wound
- a "keloid scar” is an overgrowth of scar tissue at a wound site, that typically grows beyond the boundaries of the original wound
- a "hypertrophic scar” is an elevated scar that predominantly does not grow beyond the boundaries of the original wound
- wound refers to an injury that disrupts the normal integrity of a tissue, such as skin A “wound” may intentionally or accidentally occur Examples of wounds include lacerations, contused wounds, closed wounds, open wounds, perforated wounds, incised wounds, puncture wounds, burns, etc
- patient refers to warm blooded animals such as, for example, guinea pigs, mice, rats, gerbils, cats, rabbits, dogs, monkeys, chimpanzees, stump tail macaques, and humans
- treat refers to the ability of the compounds to relieve, alleviate or slow the progression of the patient's disease (or condition) or any tissue damage associated with the disease
- mammal refers to a member of the class Mammalia Examples of mammals include, without limitation, humans, primates, chimpanzees, rodents, mice, rats, rabbits, horses, livestock, dogs, cats, sheep and cows In one particular embodiment, a mammal is a human
- the term “isomer” means “stereoisomer” and “geometric isomer” as defined below
- stereoisomer means compounds that possess one or more chiral centers and each center may exist in the R or S configuration
- Stereoisomers include all diastereome ⁇ c, enantiomeric and epimeric forms as well as racemates and mixtures thereof
- geometric isomer means compounds that may exist in cis, trans, anti,
- Certain of the compounds of the formula (I) may exist as geometric isomers
- the compounds of the formula (I) may possess one or more asymmetric centers, thus existing as two, or more, stereoisomers forms
- the present invention includes all the individual stereoisomers and geometric isomers of the compounds of formula (I) and mixtures thereof Individual enantiomers can be obtained by chiral separation, by using available synthetic building blocks incorporating the relevant asymmetric center with the appropriate stereochemistry in the synthesis, or by asymmetric synthesis starting with
- alkyl group or "alkyl” means a monovalent radical of a straight or branched chain alkane
- _3 alkyl is an alkyl group having from 1 to 3 carbon atoms
- Examples of C n - C 3 straight-chain alkyl groups include methyl, ethyl, and n-propyl
- Examples of branched-chain C 1 -C 3 alkyl groups include isopropyl
- alkyl includes both "unsubstituted alkyls" and “substituted alkyls,” the latter of which refers to alkyl groups having substituents replacing a hydrogen on one or more carbons (e g , one to six substituents) of the hydrocarbon backbone
- substituents may be independently selected from the group consisting of halo, I, Br, Cl, F, -OH, -COOH, and -NH2
- Typical substituted C 1 -C 3 straight-chain alkyl groups include 2-chloropropyl, 2-hydroxy-ethyl, 2-am ⁇ nopropyl, and trifluoromethyl
- ⁇ -Cscycloalkyl refers to a monovalent radical of a monocyclic alkane containing from
- C3-C6cycloalkyls examples include cyclopropyl, cyclobutyl, cyclopentyl, and cyclohexyl
- C ⁇ C ⁇ cycloalkyl refers to a monovalent radical of a monocyclic alkane containing from
- C ⁇ Cscycloalkyls examples include cyclobutyl, cyclopentyl, and cyclohexyl
- 4-6-membered heterocycloalkyl refers to a monovalent radical of a 4-6 membered monocyclic heterocycloalkane
- a 4-membered heterocycloalkyl is a 4-membered ring containing 3 carbons and a heteroatom selected from oxygen, nitrogen, sulfur The sulfur may also be present as S(O) or S(O) 2
- 4- membered heterocycloalkyl groups include oxetanyl, thietanyl, and azetidinyl
- a 5-membered, heterocycloalkyl contains from 2 to 4 carbon atoms and from 1 to 3 heteroatoms selected from the group consisting of 1 O, 1 S, 1 N, 2 N, 1 S and 1 N, 1 S and 2 N, 1 O and 1 N, and 1 O and 2 N, wherein when two O atoms or one O atom and one S atom are present in a ring, the two O atoms or one O atom and one S atom are not bonded directly to each other
- a sulfur may also be present as S(O) or S(O) 2
- Examples of 5-membered heterocycloalkyls include t
- a 5-membered heteroaryl is selected from the group consisting of furanyl, imidazolyl, isoxazolyl, isothiazolyl, oxadiazolyl, oxazolyl, pyrazolyl, pyrrolyl, thienyl, thiazolyl, and triazolyl
- a "6-membered heteroaryl” is a 6-membered, monocyclic, aromatic ring radical having from 4 to
- a 6-membered heteroaryl is selected from the group consisting of py ⁇ dinyl, pyrimidinyl, py ⁇ dazinyl, and pyrazinyl
- Scheme 1 depicts the synthesis of a pyrazole 6
- a th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne 1 (see e g , Wikel et al (1993) J Het Chem , 30 289-290) in an aprotic solvent, such as THF (tetrahydrofuran), diethylether, etc may be reacted with an alky-lithium reagent such as n-butyllithium at or below about -40 0 C
- the th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne is shown as unsubstituted in Scheme 1 , however it may be optionally substituted as described herein
- N-methyl-N-methoxyacetamide 2 (or other suitable acylating agents such as N- acetyl-morpholine, acetic anhydride, and acetyl chloride) is added to the reaction and the reaction is allowed to proceed at -30 to -45 0 C to provide the ketone
- the ketone 3 is then reacted with dimethoxy-N.N-dimethylmethanamine ("DMF-DMA") in DMF (dimethylformamide) at about 70 0 C to provide 4 (e g , (E)-3-(d ⁇ methylam ⁇ no)-1-(th ⁇ eno[3,2-c]py ⁇ d ⁇ n-2- yl)prop-2-en-1-one) 4 is treated with a pyndinyl-hydrazine 5 (e g , 1-(6-methylpyr ⁇ d ⁇ n-2-yl)hydraz ⁇ ne) in acetic acid at about 80 0 C to yield the regioisomers 6 and 7
- the regioisomer 7 can be separated from 6 to provide 6 using conventional purification techniques such as precipitation, filtration, and column chromatography
- Scheme 2 depicts an alternate synthetic route to the pyrazole 6
- a solution of a th ⁇ eno[3,2- c]pyr ⁇ d ⁇ ne 1 may be reacted under a nitrogen gas atmosphere, in a solvent such as THF at about -50°C to -78 "C with an akyllithium reagent such as n-butyllithium
- the th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne is shown as unsubstituted in Scheme 2, however it may be optionally substituted as described herein
- the addition of tmsopropyl borate and phosphoric acid yields the phosphoric acid salt of the boronic acid 9
- the boronate 9 is then coupled to the pyridinyl-pyrazole 10 to provide the pyrazole 6, by the addition of a base such as an inorganic carbonate base (e g , Na 2 CO 3 , K 2 CO 3 , NaHCO 3 , etc ) or potassium phosphate t ⁇
- the compounds of the present invention may be capable of forming pharmaceutically acceptable salts, including but not limited to acid addition and/or base salts
- Pharmaceutically acceptable salts of the compounds of formula (I) include the acid addition and base salts (including disalts) thereof Examples of suitable salts can be found for example in Stahl and
- Pharmaceutically acceptable acid addition salts of the compounds of Formula I include non-toxic salts derived from inorganic acids such as hydrochloric, nitric, phosphoric, sulfuric, hydrobromic, hydriodic, phosphorus, and the like, as well as the salts derived from organic acids, such as aliphatic mono- and dicarboxylic acids, phenyl-substituted alkanoic acids, hydroxy alkanoic acids, alkanedioic acids, aromatic acids, aliphatic and aromatic sulfonic acids, etc
- Such salts thus include the acetate, aspartate, benzoate, besylate (benzenesulfo ⁇ ate), bicarbonate/carbonate, bisulfate, caprylate, camsylate (camphor
- Acid addition salts of the basic compounds may be prepared by contacting the free base form with a sufficient amount of the desired acid to produce a particular salt
- the free base form may be regenerated by contacting the salt form with a base and isolating the free base
- the free base forms may differ from their respective salt forms somewhat in certain physical properties such as solubility in polar solvents
- Pharmaceutically acceptable base addition salts may be formed with metals or amines, such as alkali and alkaline earth metal hydroxides, or of organic amines
- metals used as cations are aluminum, calcium, magnesium, potassium, sodium, and the like
- suitable amines include argmine, choline, chloroprocaine, N,N'-d ⁇ benzylethylened ⁇ am ⁇ ne, diethylamine, diethanolamine, diolamine, ethylenediamine (ethane-1 ,2-d ⁇ am ⁇ ne), glycine, lysine, meglumine, N-methylglucamine, olamine, procaine (benzathine) and tromethamine
- the base addition salts of acidic compounds may be prepared by contacting the free acid form with a sufficient amount of the desired base to produce the salt in the conventional manner
- the free acid form may be regenerated by contacting the salt form with an acid and isolating the free acid
- the free acid forms may differ from their respective salt forms somewhat in certain physical properties such as solubility in polar solvents
- compounds of the present invention may be administered as a pharmaceutical composition, comprising one or more pharmaceutically acceptable excipients.
- pharmaceutical composition refers to a composition suitable for administration in medical or veterinary use
- therapeutically effective amount means an amount of a compound, or a pharmaceutically acceptable salt thereof, sufficient to inhibit, halt, or allow an improvement in the disease being treated when administered alone or in conjunction with another pharmaceutical agent or treatment in a particular subject or subject population
- a therapeutically effective amount can be determined experimentally in a laboratory or clinical setting, for the particular disease and subject being treated
- excipient is used herein to describe any ingredient other than the compound(s) of the invention
- choice of excipient typically depends to a large extent on factors such as the particular mode of administration, the effect of the excipient on solubility and stability and the nature of the dosage form
- Pharmaceutically acceptable excipients are determined in part by the particular composition being administered, as well as by the particular method used to administer the composition Accordingly, there are a wide variety of suitable formulations of pharmaceutical compositions of the present invention (see, e g , Remington The Science and Practice of Pharmacy, 20th ed , Gennaro et al Eds , Lippincott Williams and Wilkins, 2000)
- a compound of the present invention can be formulated as a pharmaceutical composition in the form of a syrup, an elixir, a suspension, a powder, a granule, a tablet, a capsule, a lozenge, a troche, an aqueous solution, a cream, an ointment, a lotion, a gel, an emulsion, etc
- pharmaceutically acceptable excipients are typically solid and liquid excipients
- Solid form preparations include powders, tablets, pills, capsules, cachets, suppositories and dispersible granules
- a solid excipient can be one or more substances which may also act as diluents, flavoring agents, binders, preservatives, tablet disintegrating agents, or an encapsulating material
- the excipient is typically a finely divided solid which is in a mixture with the finely divided active component
- the active component is mixed with the excipient having the necessary binding properties in suitable proportions and compacted in the shape and size desired
- the powders and tablets typically contain from 1 % to 95% (w/w) of the active compound
- the active compound ranges from 5% to 70% (w/w)
- Suitable excipients are magnesium carbonate, magnesium stearate, talc, sugar, lactose, pectin, dextrin, starch, gelatin, tragacanth, methylcellulose, sodium carboxymethylcellulose, a low melting wax, cocoa butter and the like
- the term "preparation" is intended to include the formulation of the active compound with encapsulating material as an excipient providing a capsule in which the active component with or without other excipients, is surrounded by a excipient, which is thus in association with it Similarly, cachets and lozenges are included Tablets, powder
- a low melting wax such as a mixture of fatty acid glycerides or cocoa butter
- the active component is dispersed homogeneously therein, as by stirring
- the molten homogeneous mixture may then be poured into convenient sized molds, allowed to cool and thereby to solidify
- Liquid form preparations include solutions, suspensions, and emulsions, for example, water or water/propylene glycol solutions
- Liquid preparations can be prepared by dissolving the active ingredient in an aqueous or non-aqueous pharmaceutically acceptable solvent, which may also contain suspending agents, sweetening agents, flavoring agents, and preservative agents as are known in the art
- solid form preparations which are intended to be converted, shortly before use, to liquid form preparations for oral administration
- Such liquid forms include solutions, suspensions, and emulsions
- These preparations may contain, in addition to the active component, colorants, flavors, stabilizers, buffers, artificial and natural sweeteners, dispersants, thickeners, solubilizing agents and the like
- a compound of the present invention, alone or in combination with other suitable components, can be made into aerosol formulations ( ⁇ e , they can be "nebulized") to be administered via inhalation Aerosol formulations can be placed into pressurized acceptable propellants, such as dichlor
- a topical composition according to the present invention can be in the form of solutions, lotions, salves, creams, ointments, liposomes, sprays, gels, foams, roller sticks, or any other formulation routinely used to deliver a topical pharmaceutical composition
- Formulations suitable for parenteral administration include aqueous and non-aqueous, isotonic sterile injection solutions, which can contain antioxidants, buffers, bacteriostats and solutes that render the formulation isotonic with the blood of the intended recipient and aqueous and nonaqueous sterile suspensions that can include suspending agents, solubihzers, thickening agents, stabilizers and preservatives
- the pharmaceutical preparation is preferably in unit dosage form In such form the preparation is subdivided into unit doses containing appropriate quantities of the active component
- the unit dosage form can be a packaged preparation, the package containing discrete quantities of preparation, such as packeted tablets, capsules and powders in vials or ampules
- the unit dosage form can be a capsule, tablet, cachet, or lozenge itself, or it can be the appropriate number of any of these in packaged form
- the formulations of compounds can be presented in unit-dose or multi-dose sealed containers, such as ampules and vials
- compositions containing a compound of the present invention may be packaged for retail distribution ( ⁇ e , an article of manufacture) Such articles may be labeled and packaged in a manner to instruct the patient how to use the product Such instructions may include the condition to be treated, duration of treatment, dosing schedule, etc
- the quantity of active component in a unit dose preparation may be varied or adjusted from 0 1 mg to 1000 mg, preferably 1 0 mg to 100 mg, or from 0 01% to 95% (w/w) of a unit dose, according to the particular application and the potency of the active component
- the dose administered to a subject, in the context of the present invention should be sufficient to affect a beneficial therapeutic response in the subject over time
- the composition can, if desired, also contain other compatible therapeutic agents
- the dose will typically be determined by the efficacy of the particular compound employed and the condition of the subject, the severity of the disease being treated, as well as the body weight or surface area of the subject to be treated
- the size of the dose also will be determined by the existence, nature and extent of any adverse side-effects that accompany the administration of a particular compound in a particular subject
- the physician can evaluate factors such as the circulating plasma levels of the compound, compound toxicities, and/or the progression of the disease, etc
- compounds of the present invention can be administered at a rate determined by factors that can include the pharmacokinetic profile of the compound, contraindicated drugs and the side-effects of the compound at various concentrations, as applied to the mass and overall health of the subject
- the total daily dosage may be divided and administered in portions during the day, if desired
- TGF ⁇ -mediated condition examples include all types of cancer (e g , breast, lung, colon, prostate, ovarian, pancreatic, melanoma, all hematological malignancies, etc ), as well as all types of fibrotic diseases (e g , glomerulonephritis, diabetic nephropathy, hepatic fibrosis, pulmonary fibrosis, arterial hyperplasia and restenosis, scleroderma, and dermal scarring)
- the TGF ⁇ -mediated condition is dermal scarring
- administering refers to the method of contacting a compound with a subject
- the compounds of the present invention can be administered by a variety of routes including injection, that is, intravenously
- a compound of the present invention When administered to reduce scarring a compound of the present invention may be typically applied to the wound and/or area around a wound
- a compound of the present invention can be administered topically to a wound in the form of a patch, solution, lotion, salve, cream, ointment, liposome, spray, gel, foam, roller stick, or any other formulation routinely used to deliver a topical pharmaceutical composition
- a compound of the present invention may be administered via injection into a wound or area around a wound
- a compound of the present invention is administered to a wound that has been sutured, stapled, taped, and/or bandaged, etc
- a compound of the present invention is administered immediately after the wound occurs
- a compound of the present invention is administered within 1 hour, 8 hours, 12 hours, 1 day, 2 days, 3 days, 1 week, 2 weeks, 1 month, 6 months, 1 year, or longer than 1 year, after wound occurrence
- the wound occurs via an incision
- the wound occurs via an incision
- Reduction of scarring or inhibition of scar formation is meant to convey that the compounds of the present invention relate to reducing the appearance of a scar as judged by the patient or a health care practitioner (e g , a physician)
- Reduction of scarring or inhibition of scar formation may be accompanied by an improvement in one or more of the following indicia, including, reduction of extracellular matrix deposition during healing, reduction of collagen deposition, reduction of size, reduction of shape, reduction of thickness, reduction of surface area, reduction of severity, reduction of height, improvement in coloration etc
- the compound is administered topically
- topical refers to application of the compounds (and optional carrier) directly to the skin or wound area Topical administration is especially appropriate for wounds to the skin
- the dose may vary, but as a general guideline, the compound may be present in a pharmaceutically acceptable carrier in an amount of from about 0 01 to 50 w/w%, and more typically from about 0 1 to 10 w/w%
- the pharmaceutical composition may be applied to the affected area from 1 to 4 times daily
- the compound can be co-administered with other compounds, agents, or dressings to further enhance its activity, or to minimize potential side effects
- co-administered refers to administering the compound of Formula I with a second medicinal, typically having a differing mechanism of action, using a dosing regimen that promotes the desired result This can refer to simultaneous dosing, dosing at different times during a single day, or even dosing on different days
- the compounds can be administered separately or can be combined into a single formulation
- agents, compounds, or dressings may be coadministered with a compound of the present invention, including TGF ⁇ 3 , TGFp 1 antibodies, TGF ⁇ 2 antibodies, triamcinolone acetonide (9-fluoro-11, 16,17-tr ⁇ hydroxy-17-(2-hydroxyacetyl) -10,13-d ⁇ methyl-
- agents, compounds, or dressings may be co-administered to a wound that improve wound healing, including 5-fluorourac ⁇ l, estrogen, nACh (nicotinic acetylcholine) receptor agonists, FGF (fibroblast growth factor), EGF (epidermal growth factor) IGF (insulin-like growth factor), and PDGF (platelet-derived growth factor)
- suitable therapeutic agent(s) include, but are not limited to, standard non-steroidal anti-inflammatory agents (hereinafter NSAID's) (e g, piroxicam, diclofenac), propionic acids (e g ,
- Step i Thieno[3,2-c]pyridine.
- Th ⁇ eno[3,2-c]py ⁇ d ⁇ ne (9 20 g, dark brown orange solid, see Wikel et al (1993) J Het Chem , 30 289-290) was dissolved in CH 2 CI 2 and subjected to column chromatography (Biotage Horizon system, 12O g lsco RediSep column, equilibrate with hexanes, elute with 45% EtOAc ("ethyl acetate”)/hexanes, isocratic)
- the collected fractions were a pale yellow oil that concentrated in vacuo to provide 8 48 g of a solid
- Step iii (E)-3-(dimethylamino)-1-(thieno[3,2-c]pyridin-2-yl)prop-2-en-1-one.
- N,N-d ⁇ methylformam ⁇ de- dimethylacetal (DMF-DMA) (9 5 ml) was added to a solution of 1-(th ⁇ eno[3,2-c]pyr ⁇ d ⁇ n-2-yl)ethanone (3 17 g) in 20 mL DMF
- the reaction was heated to 70 0 C overnight
- the reaction was then cooled to room temperature
- the DMF was removed on a rotary evaporator to obtain a dark brown orange solid
- the residue was diluted with EtOAc and water A large amount of yellow solid was evident This was collected by filtration (3 54 g) This solid was dried in a 50 0 C vacuum oven
- Step iv 2-(1-(6-methylpyridin-2-yl)-1H-pyrazol-5-yl)thieno[3,2-c]pyridine
- the dark oil (about 800 mg) was subjected to preparative column chromatography on a Phenomenex, Gemini C-18 column (150x19 mm, 5 ⁇ M, Mobile Phase A Water (+0 1% NH 4 OH), B CH 3 CN (+0 1% NH 4 OH), Gradient 90-10% A over 10 mm, hold at 90% A for 1 5 minutes Flow Rate 28 mL/min, Injection Volume 2 mL, Detection DAD 210-350 nm, MS APCI + , MS APCI " )
- Step i 5-ethyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-ol.
- a stirring mixture of 6-methyl-py ⁇ d ⁇ n-2-yl)- hydrazine (100 g) and ethyl propionylacetate (12 mL) in glacial acetic acid (100 mL) was warmed to 80
- Step M trifluoro-methanesulfo ⁇ ic acid 5-ethyl-2-(6-methyl-pyr ⁇ din-2-yl)-2H-pyrazol-3-yl ester.
- 5-ethyl-2-(6-methyl-pyr ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-ol 7 1 g
- t ⁇ ethylamine 5 4 mL
- dichloromethane 75 mL
- t ⁇ fluoromethanesulfonic anhydride 6 5 mL
- the cold bath was removed and the reaction mixture was allowed to warm to room temperature and was stirred overnight
- the reaction mixture was concentrated under reduced pressure and the concentrate was purified by flash silica gel column chromatography Elution through a silica cartridge (Analogix SuperFlash SF65-400) with a gradient (100 % hexanes to 35 % ethyl acetate in
- Step Mi 2-[3-ethyl-1-(6-methylpyridin-2-yl)-1H-pyrazol-5-yl]thieno[3,2-c]pyridine.
- 3-ethyl-1-(6-methylpy ⁇ d ⁇ n-2-yl)-1H- pyrazol-5-yl t ⁇ fluoromethanesulfonate (1 21 g)
- th ⁇ eno[3,2-c]py ⁇ d ⁇ n-2-ylboron ⁇ c acid (1 0 g)
- potassium phosphate tribasic (2 3 g)
- the flask was evacuated under a vacuum and the suspension bubbled with nitrogen gas
- PdCI 2 (dppf) Strem, d ⁇ chloro[1,1'- b ⁇ s(d ⁇ phenylphosph ⁇ no)ferrocene]pallad ⁇ um (II
- 4-ethyl-1-(6-methylpy ⁇ d ⁇ n-2-yl)-1 H- pyrazol-5-yl trifluoromethanesulfonate (1 2 g)
- th ⁇ eno[3,2-c]pyr ⁇ d ⁇ n-2-ylboron ⁇ c acid (1 2 g)
- potassium phosphate tribasic 23 g
- the flask was evacuated under a vacuum and the suspension bubbled with nitrogen gas
- PdCI 2 (dppf) (Strem, D ⁇ chloro[1 ,1'- b ⁇ s(d ⁇ phenylphosph ⁇ no)ferrocene]pallad ⁇ um (II
- the tubes containing desired product were concentrated by rotary evaporation to afford a dark oil
- the dark oil was triturated with Et 2 O and the solid was filtered away Additional solid precipiate was isolated from the filtrate and combined with the the solid from the original filtration
- the combined solids were dissolved in hot EtOH (about 2 mL) Heptane was added until a precipitate started to form A dark solid then formed After about 10 minutes, it appeared that the solid had finished precipitating
- the mixture was filtered through paper filter into another flask
- the filtrate was diluted with more heptane until a cloudiness persisted
- the filtrate was allowed to stand overnight at room temperature
- the contents of the flask were concentrated to dryness on a rotary evaporator and dissolved in 1-2 mL hot EtOH, filtered through filter paper and diluted with heptane until a cloudiness persisted
- the flask was allowed
- the flask was removed from the rotary evaporator and filtered into another flask using filter paper to remove a brown solid A white solid started to precipitate in the filtrate The white solid was collected by filtration and dried in a 40 °C vacuum oven for over 48 hours to obtain 85 mg of the title compound
- Step ii 2-[(6-methyl-pyridin-2-yl)-hydrazono]-cyclopentanecarboxylic acid ethyl ester.
- a solution of ethyl 2-oxocyclopentanecarboxylate (6 34 g, 5 88 mL) and (6-methyl-py ⁇ d ⁇ n-2-yl)-hydraz ⁇ ne (5 g) in ethanol (100 mL) was heated to 80 0 C under an atmosphere of nitrogen for about 19 hours The reaction mixture was cooled to room temperature and the solvent removed in vacuo to provide a crude material (7 72 g), which was directly taken to the next reaction
- Step Mi 2-(6-methyl-pyridin-2-yl)-2,4,5,6-tetrahydro-cyclopentapyrazol-3-ol.
- a solution of crude 2-[(6-methyl-py ⁇ d ⁇ n-2-yl)-hydrazono]-cyclopentanecarboxyl ⁇ c acid ethyl ester (66 g) and sodium methoxide (2 73 g) in methanol (250 mL) was concentrated under reduced pressure, nearly to dryness, to provide a brown paste This paste was then heated to 160 0 C for 2 hours being cautious of excessive bubbling After 2 hours the reaction was cooled to room temperature and water (100 mL) was added The pH was adjusted to 7 with 1 N HCI, ethyl acetate (200 mL) was then added and the resultant mixture was stirred until precipitate dissolution occurred The layers were separated and the aqueous layer was washed with another portion of ethyl acetate (100 mL) The combined organic layers
- Step iv trifluoro-methanesulfonic acid 2-(6-methyl-pyridin-2-yl)-2,4,5,6-tetrahydro- cyclopentapyrazol-3-yl ester.
- 2-(6-methyl-py ⁇ d ⁇ n- 2-yl)-2,4,5,6-tetrahydro-cyclopentapyrazol-3-ol 17.
- triethylamine 9 76 g, 13 44 mL
- dichloromethane 350 mL
- trifluoromethane sulfonic anhydride (1623 mL) via a pressure equalizing funnel over 10 minutes
- the resultant mixture was stirred at -78 °C for 1 hour and then allowed to warm to room temperature and stir for an additional hour
- the solvent was removed in vacuo to provide a brown precipitate
- the brown precipitate was purified via flash si
- Step ii 1-(6-methylpyridin-2-yl)hydrazine.
- a mixture of 2-bromo-6-methyl-py ⁇ d ⁇ ne (602 1Og) and hydrazine hydrate (1570 ml) was refluxed at 120 ° C for 6 hours, and then stirred at room temperature for about 48 hours
- the solid separated was extracted with diethylether (3 x 1 5L) and the combined ether extracts were washed with brine, dried over Na 2 SO 4 , filtered and concentrated ( ⁇ 430g)
- the residue was stirred in a mixture of ether (200ml) and hexane (1 5L), filtered and washed with 5% diethylether in hexane to give a pale yellow solid (sticky)
- the solid was vacuum distilled at 106-113 0 C/ 2mm, which solidified instantly The solid was then dissolved in 2L of diethylether and precipitated by adding 2L of hexane, filtered and
- a jacketed reaction flask was equipped with mechanical stirrer, nitrogen inlet, and reflux condenser and the jacket was cooled to 10 °C
- the reactor was programmed to automatically cool to 0 0 C if at any point the internal temperature exceeded 80 0 C
- the reactor was purged with a steady stream of nitrogen gas
- Step iii 4-methyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-ol.
- sodium methoxide 136 g
- anhydrous tetrahydrofuran 50 mL
- anhydrous methyl formate 12 6 mL
- the mixture frothed and to the suspension was added ethyl formate (28 7 mL) with a slow, steady stream via syringe while swirling the reaction vessel by hand to facilitate more efficient mixture of the suspension
- 4-Methyl-2-(6-methyl-py ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-ol was also produced as follows To a solution of ethyl formate (117 5g) and ethyl propionate (54 Og) in 40 ml of tetrahydrofuran (THF) was added, drop-wise, potassium t-butoxide (502 ml of a 1 0 molar solution in THF) at ambient temperature over approximately 0 5 hour A white precipitate began to form along with some bubbling After another 7 5 hours the reaction was filtered, the solid was washed with diethyl ether and then dried under vacuum at 40 0 C for 16 hours to give potassium 2-ethoxycarbonyl-propen-1-olate as a grey powder (23 5g) To a solution of this potassium salt (176 g) in 450 ml of 1-propanol was added (6-Methyl-py ⁇ d ⁇ n-2-yl)-
- Step iv T ⁇ fluoro-methanesulfonic acid 4-methyl-2-(6-methyl-pyrid ⁇ n-2-yl)-2H-pyrazol-3-yl ester.
- a stirring mixture of a dichloromethane solution of 4-methyl-2-(6-methyl-py ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-ol (13 39 g in 50 mL of dichloromethane) and triethylamine (11 mL) in additional dichloromethane (50 mL more, 100 mL total dichloromethane) at -78 0 C under a nitrogen atmosphere was added t ⁇ flic anhydride (13 3 mL) with a slow, steady stream via syringe over five minutes The cold bath was removed and the mixture was allowed to warm gradually over one hour, thirty minutes to room temperature The mixture was concentrated under reduced pressure and the concentrate was purified by flash silica chromatography Elution with a gradient (100 % heptane
- Example 8 2-[4-Methyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-yl]-thieno[3,2-c]pyrid ⁇ ne. Step i. 2-(4,4,5,5-tetramethyl-[1,3,2]dioxaborolan-2-yl)-thieno[3,2-c]pyridine.
- the temperature was allowed to warm to 5 0 C and held at that temperature for 1 hour
- the reaction mixture was neutralized (pH 7) very slowly with 40 mL of 4M hydrochloric acid in 1,4-d ⁇ oxane, keeping the temperature below 1O 0 C A precipitate formed.
- the reaction mixture was stirred for 1 hour and then the solid was collected by filtration.
- the solid was dried under vacuum at 40 0 C for 16 hours
- the dry solid (36g) was stirred with 400 mL of water for 1 5 hours.
- the slurry was filtered and the solid collected.
- the solid was dried under a flow of air for 60 hours to give the desired product (34 5g).
- Step ii 2-[4-Methyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-yl]-thieno[3,2-c]pyridi ⁇ e.
- An oven-dried 500 mL three-neck round-bottom flask equipped with reflux condenser and gas inlet valve was charged with 2-(4,4,5,5-tetramethyl-[1 ,3,2]d ⁇ oxaborolan-2-yl)-th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne (11 56 g), t ⁇ fluoro- methanesulfonic acid 5-ethyl-2-(6-methyl-pyr ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-yl ester (164 g), potassium phosphate t ⁇ basic (28 g), and 1,4-d ⁇ oxane (300 mL)
- the reaction vessel was evacuated and flushed with nitrogen gas The degassing and nitrogen flush was repeated twice To the
- Step i the title compound of Step i was prepared as follows To a suspension of 60% sodium hydride (8 04 g) in anhydrous DMF (40 mL) under a nitrogen atmosphere was added dropwise a solution of 4-methyl-pyrazol (15 g) in 30 ml of DMF in an ice bath over a 40 minute period The resulting mixture was stirred at room temperature for 0 5 hour and then 2-flouro-6-methylpy ⁇ d ⁇ ne (22 33 g) was added dropwise The mixture was stirred at 80 0 C for 3 hours and cooled down The reaction mixture was poured in ice-water and extracted with ethyl acetate two times The combined organic phase was washed with water and brine, dried over Na 2 SO 4 and filtered The filtrate was concentrated in vacuo to give a residue
- Step ii 2-(5-bromo-4-methylpyrazol-1-yl)-6-methylpyridine.
- a cold (-60 °C) solution of 2- methyl-6-(4-methyl-pyrazol-1-yl)-pyr ⁇ d ⁇ ne (0 52 g,) (prepared by Reaction Condition 1 in Step ⁇ ) in 14 mL of anhydrous THF was added 1 33 mL of a 2 5M solution of ⁇ -butyll ⁇ th ⁇ um (021 g) in hexanes
- the reaction mixture was stirred at -60 0 C for one hour
- a 10 mL solution of ⁇ /-bromosucc ⁇ n ⁇ m ⁇ de (0 59 g) in THF was added and then the final solution was stirred at -60 °C for 2 hours
- Saturated ammonium chloride (20 mL) was added and then the reaction mixture was allowed to warm to 24 0 C
- the reaction mixture was diluted with 300 mL of ethyl acetate and then the
- Step Mi 2-[4-methyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-yl]-thieno[3,2-c]pyridine.
- 2-(5-bromo-4-methylpyrazol-1-yl)-6-rnethylpyr ⁇ d ⁇ ne (2 0 g) in 20 mL of anhydrous 1,2-d ⁇ methoxyethane (DME) was added palladium bistriphenylphosphine dichloride (0 153 g)
- the reaction mixture was stirred at room temperature for 30 minutes and then 20 mL of water was added, followed by sodium bicarbonate (2 0 g) and then trifluoro-methanesulfonic acid 5-ethyl-2-(6-methyl-pyr ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-yl ester (3 1 g) was added
- the reaction mixture was refluxed for 18 hours and then cooled to room temperature
- the reaction mixture was diluted with 400 m
- Step i 4-Bromo-pyridine.
- 4-Bromopyr ⁇ d ⁇ ne hydrochloride (20 O g, 102 9 mmol) was partitioned between EtOAc and 5% NaHCO 3 The layers were separated, and the aqueous phase extracted with EtOAc The combined organic extracts were washed with water and brine, dried over Na 2 SO 4 , and evaporated under reduced pressure in a 40 0 C bath to provide 13 7 g (84%) of a volatile oil which was used immediately in the next step
- Step ii ⁇ Bromo-py ⁇ dine-S-carbaldehyde.
- a suspension of 4-bromopy ⁇ d ⁇ ne (13 7 g, 86 8 mmol) in 300 mL THF was purged with N 2 and cooled to -78°C under an atmosphere of dry N 2
- a solution of lithium diisopropylamide (2 0 M solution in heptane/THF/ethylbenzene, 434 mL, 86 8 mmol) was added over about 3 minutes After 30 minutes, DMF (dimethylformamide) was added
- the reaction mixture was maintained at -78X for 3 hours before allowing it to warm to ambient temperature overnight
- the reaction mixture was quenched with saturated NH 4 CI and concentrated under reduced pressure to remove most of the THF
- the aqueous mixture was extracted with EtOAc
- the combined organic extracts were washed with water and brine, dried over Na 2 SO 4 , evaporated, and chromatographe
- Step v 2-[4-Methyl-2-(6-methyl-pyridin-2-yl)-2H-pyrazol-3-yl]-thieno[3,2-c]pyridine.
- a solution of 3- d ⁇ methylam ⁇ no-2-methyl-1-th ⁇ eno[3,2-c]py ⁇ d ⁇ n-2-yl-propenone (1 31 g, 5 32 mmol) in acetic acid (20 mL) was heated to 90°C
- Step i 4-Bromo-pyridine-3-carbaldehyde.
- a suspension of 4-bromopyr ⁇ d ⁇ ne hydrochloride (5 0 g, 25 7 mmol) in THF (100 mL) was purged with N 2 and cooled to -78°C
- a solution of lithium dnsopropylamide (2 0 M solution in heptane/THF/ethylbenzene, 27 0 mL, 54 0 mmol) was added over 3 minutes After 30 minutes, DMF (8 56 mL, 1106 mmol) was added
- the reaction mixture was stirred at -78°C for 15 minutes before rapidly warming to room temperature in a water bath
- the reaction was allowed to stir at ambient temperature for 18 hours
- the reaction was quenched with saturated NH 4 CI (100 mL) and extracted with EtOAc
- the combined organic extracts were washed with water and brine, dried over Na 2 SO 4 , evaporated, and chromatographe
- Step iii. Thieno[3,2-c]pyridine-2-carboxylic acid methoxy-methyl-amide.
- a suspension of O 1 N- dimethylhydroxylamine hydrochloride (2 32 g, 23 8 mmol) in THF (20 mL) was purged with N 2 and cooled to -78 0 C before adding n-butyllithium (1 6 M in hexanes, 30 0 mL, 48 1 mmol) Removed bath and stirred 15 minutes before replacing the bath and adding a solution of th ⁇ eno[3,2-c]pyr ⁇ d ⁇ ne-2-carboxyl ⁇ c acid methyl ester (0 92 g, 4 76 mmol) in THF (10 mL) After 45 minutes, saturated NH 4 CI was added The mixture was diluted with EtOAc, washed with water, 1 M HCI, water, 5% NaHCO 3 , water, and brine, dried over Na 2 SO 4 , and evaporated to give 0 54 g (
- Step i ⁇ /-methoxy-t ⁇ -methyl-propionamide.
- pyridine 18 2 mL
- Example 12 2- ⁇ 4-methyl-1-(6-methylpyridin-2-yl)-1H-pyrazol-5-yl)thieno[2,3-c]pyridine. Th ⁇ eno[2,3-c]pyr ⁇ d ⁇ ne of Step in, Example 12 has been synthesized previously (see e g , Graulich et al (2004) Synthesis 12 1935-1937, Graulich et al (2005) J Med Chem 48(15) 4972-4982)
- Step i (2,2-Dimethoxy-ethyl)-thiophen-2-ylmethylene-amine.
- Step ii ⁇ [(2,2-Dimethoxy-ethyl)-ethoxycarbonyl-amino]-thiophen-2-yl-methyl ⁇ -phosphonic acid dimethyl ester.
- To the oil obtained in Step i (16 3 g, 82 3 mmol) was added 60 ml_ THF under a N2 atmosphere The reaction was cooled to -10 °C (MeOH/ice) and fitted with an internal thermometer Ethyl chloroformate (7 9 ml_, 82 3 mmol) was added dropwise keeping the internal temperature at or below -9 5 °C The reaction was stirred for 10 minutes at -10 0 C and then the bath was removed and the reaction was allowed to warm to room temperature Using an ice bath as a heat sink, t ⁇ methyl phosphite (10 7 mL, 90 5 mmol) was added The reaction was allowed to gradually warm to room temperature and was stirred overnight The solvent was removed on a rotary evaporator Toluene was added
- Step Mi Thieno[2,3-c]pyridine.
- the material from Step II (23 5 g, 61 6 mmol), was dissolved in 100 mL CH 2 CI 2
- the three neck flask was fitted with a reflux condenser and internal thermometer under N 2 atmosphere
- the flask was evacuated and purged with nitrogen Titanium (IV) chloride (40 mL, 369 mmol) was added to the reaction slowly
- the reaction temperature was maintained at around 40 °C
- the reaction was placed in an ice bath to control the temperature
- the reaction was allowed to gradually warm to room temperature before heating to 40 0 C overnight
- the reaction was heated to 40 0 C for 18 hours, then cooled to room temperature
- the reaction contents were poured in portions, into a large beaker containing 200 g of ice and 200 mL NH4OH with lots of fuming observed
- the reaction was stirred vigorously for a few minutes
- the reaction was filtered and the solid was rinsed with CHCI 3
- Step iv. Thieno[2,3-c]pyridin-2-ylboronic acid trihydrogen phosphate A three neck flask fitted with an internal thermometer containing the material from Step in (4 12 g, 30 5 mmol) was evacuated and then filled with nitrogen atmosphere THF (50 mL) was added and the solution cooled to -44 °C (CH 3 CN/dry ice) n-Butyllithium (1 6M/hexane, 21 mL, 34 mmol) was added over 10 minutes, while maintaining the internal temperature at or below -35 0 C The reaction was stirred at -33 to -45 0 C for 75 minutes T ⁇ isopropyl borate (8 4 mL, 36 6 mmol) was added and the cooling bath removed The reaction was stirred for one hour then phosphoric acid (85% aqueous, 2 5 mL, 33 5 mmol) was added The reaction was diluted with 10 mL water resulting in a precipitate The reaction was stirred vigorously
- Step v 2-(4-methyl-1-(6-methylpyridin-2-yl)-1H-pyrazol-5-yl)thieno[2,3-c]pyridine.
- trifluoro-methanesulfonic acid 4-methyl-2-(6-methyl-pyr ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-yl ester (1 23 g, which may be synthesized as describe in Example 7, Step ⁇ v)
- potassium fluoride (1 11 g)
- the flask was evacuated with a vacuum and purged with nitrogen gas
- PdCI 2 (dppf) (Strem, D ⁇ chloro[1,1'-b ⁇ s(d ⁇ phe ⁇ ylphosph ⁇ no)ferrocene]pallad ⁇ um (II) dichloromethane a
- Example 13 2-(2- ⁇ 6-methylpyridin-2-yl)-2,4,5,6-tetrahydrocyclopenta[c]pyrazol-3-yl)thieno[2,3- c]pyridine.
- 2-(6-methyl-pyr ⁇ d ⁇ n-2- yl)-2,4,5,6-tetrahydro-cyclopentapyrazol-3-yl ester (1 33 g, which may be synthesized as described in Example 5, Step ⁇ v), the material from EExample 12, Step ⁇ v (2 00 g), potassium fluoride (1 11 g), potassium phosphate tribasic (2 44 g) in 45 mL dioxane
- the flask was evacuated under reduced pressure and and purged with nitrogen gas To this was added PdCI 2 (dppf) (Strem, D ⁇ chloro[1,V- b ⁇ s(d ⁇ phenylphosp
- Example 14 2-[4-methyl-2- ⁇ 6-methylpyridin-2-yl)2H-pyrazolo-3-yl]thieno[3,2-c]pyridine.
- T ⁇ fluoro- methanesulfonic acid 4-methyl-2-(6-methyl-py ⁇ d ⁇ n-2-yl)-2H-pyrazol-3-yl ester (36 6 g, 114 mmoL), potassium carbonate (39 4 g, 285 mmol), and 2-(4,4,5,5-Tetramethyl-[1,3,2]d ⁇ oxaborolan-2-yl)-th ⁇ eno[3,2- ⁇ y ⁇ dine (31 2 g, 120 mmol) were slurried in toluene (300 mL), isopropyl alcohol (IPA) (75 mL) and water (75 mL) The reaction mixture was sequentially subjected to vacuum followed by purging with nitrogen This was repeated for a total of five times B ⁇ s(tr ⁇ phenylpho
- BIOLOGICAL EXAMPLE 1 ALK-5 kinase assay methods have been described in the art (see e g , Laping et al (2002) MoI
- Bioscienses equilibrated with 100 mM T ⁇ s-HCI pH 76 buffer containing 300 mM NaCI, 10% glycerol, 1 % NP40, 2 mM dithiothreitol (DTT) and one Protease Inhibitor complete EDTA-free tablet per 50 ml (Roche)
- the column was washed with 5 column volumes of 50 m M T ⁇ s HCI pH 8 0 containing 150 mN NaCI, 10 % glycerol, 2 mM DTT and one Protease Inhibitor complete EDTA-free tablet per 100 ml
- the column was eluted with wash buffer containing 8 mM reduced glutathione Fractions were collected and dialyzed overnight in 20 mM T ⁇ s HCI pH 8 0 confining 10% glycerol, 150 mM NaCI, 2mM DTT and 1 mM 4-(2-am ⁇ noethyl)-bezenesul
- Hot ATP consists of 0 5 ⁇ Ci/well Y- 33 P-ATP (Amersham, AH9968) in Buffer
- IC 50 (nM) values are reported in Table 2 below as the mean of two or more IC 50 values that were determined in one or more experiments The number of determinations ("n") is reported within the parentheses The individual values that produced the mean IC 50 values are listed inside the parentheses if there were 4 or fewer determinations The Standard Error (SE) is reported as well The Standard Error is the standard deviation divided by the number of determinations ("n")
- ALK-5 gene reporter assay methods have been described in the art (see e g , Maliekal et al (2004) J Biol Chem 279(35) 36287-36292)
- Smad binding element (SBE) luciferase reporter activity in TGF ⁇ i stimulated NIH-3T3 cells
- the following luciferase assay employs NIH/3T3 (murine fibroblast) cells, which are transiently transfected with a Smad binding element (SBE) luciferase reporter construct This expressed construct is responsive to agents that stimulate the Smad signaling pathway Materials
- pRL-CMV vector Promega Corporation, Madison, Wl, Product E2261
- pRL is a vector encoding a Renilla reniformis luciferase under the control of a constitutively active cytomegalovirus (CMV) promoter
- pSBE4-Luc/BV4 vector also known as pSBE4-luc vector
- pSBE4-luc vector contains 4 copies of a Smad Binding Element and firefly luciferase coding region
- the NIH-3T3 cells are maintained in Dulbecco's Modified Eagle Medium with 10% Fetal Bovine Serum and 10 micrograms/ml Gentamycin Cells are split every Monday, 1 5 to 1 10, and are split again on Wednesday Cells are split on Friday, 1 20, for cells required for assay and maintenance on Monday Do not let cells grow to total confluency
- Substrate containing 1 parts Dulbecco's Modified Eagle Medium media without phenol red Seal plates and incubate for at least 10 minutes at room temperature d Read on the Packard TopCount HTS plate reader using single photon counting (SPC) mode for 6 seconds/well to read the firely luciferase activity from pSBE4-Luc/BV4 pSBE4-luc e After reading plates for firefly luciferase activity, remove seals and add 40 microliters of Stop and GIo reagent to each well Reseal plates and incubate for at least 10 minutes at room temperature Read plates on Packard TopCount as with firefly luciferase, to read the Renilla luciferase activity from pRL
- the Renilla luciferase activity serves a tra ⁇ sfection control
- the firefly luciferase activity serves as the assay readout
- the luciferase assay activity is normalized to the Renilla assay activity for each particular sample
- IC 50 (nM) values are reported in Table 3 below as the mean of two or more IC 50 values that were determined in one or more experiments The number of determinations ("n") is reported within the parentheses The individual values that produced the mean IC 50 values are listed inside the parentheses where n is 4 or less The Standard Error (SE) is reported as well The Standard Error is the standard deviation divided by the number of determinations ("n")
- Propylene glycol Purity >99 5%
- ACS reagent Sigma-Ald ⁇ ch Chemicals, St Louis, MO
- Polyethylene glycol PEG 400
- Molecular Weight 380 ⁇ 20 (Mallmkrodt Baker lnc , Phillipsburg, NJ) Hydroxypropyl cellulose (KLUCEL ® HF) (Hercules Incorporated, Wilmington, DE) Water, Chromosolve ® for HPLC (Sigma-Aldrich Chemicals, St Louis, MO)
- Propylene glycol (Purity >99 5%), ACS reagent (Sigma-Aldrich Chemicals, St Louis, MO) Polyethylene glycol (PEG 400), Molecular Weight 380-420 (Mallmkrodt Baker lnc , Phillipsburg, NJ) Hydroxypropyl cellulose (KLUCEL ® HF) (Hercules Incorporated, Wilmington, DE) Water, Chromosolve ® for HPLC (Sigma-Ald ⁇ ch Chemicals, St Louis, MO) Benzyl alcohol (Purity >99%) (Sigma-Ald ⁇ ch Chemicals, St Louis, MO)
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JP2009532905A JP5443988B2 (en) | 2006-10-16 | 2007-10-04 | Therapeutic pyrazolyl thienopyridine |
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CA2666603A CA2666603C (en) | 2006-10-16 | 2007-10-04 | Therapeutic pyrazolyl thienopyridines and uses thereof for treating tgf.beta. mediated conditions |
AU2007311560A AU2007311560B2 (en) | 2006-10-16 | 2007-10-04 | Therapeutic pyrazolyl thienopyridines |
MX2009003157A MX2009003157A (en) | 2006-10-16 | 2007-10-04 | Therapeutic pyrazolyl thienopyridines. |
IL197750A IL197750A0 (en) | 2006-10-16 | 2009-03-23 | Therapeutic pyrazolyl thienopyridines |
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FR2949468A1 (en) * | 2009-08-28 | 2011-03-04 | Sanofi Aventis | New 2-pyridin-2-yl-pyrazol-3(2H)-one compounds are hypoxia inducible factor activators, useful for the treatment of hypertension, heart failure, diabetes, anemia, angina pectoris or myocardial infarction and pulmonary hypertension |
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CL2007002916A1 (en) | 2008-04-18 |
IL197750A0 (en) | 2009-12-24 |
EP2074128B1 (en) | 2013-08-14 |
AR063318A1 (en) | 2009-01-21 |
US8455512B2 (en) | 2013-06-04 |
CN101528752A (en) | 2009-09-09 |
JP5443988B2 (en) | 2014-03-19 |
US20080090861A1 (en) | 2008-04-17 |
EP2074128A1 (en) | 2009-07-01 |
CA2666603A1 (en) | 2008-04-24 |
NO20091247L (en) | 2009-04-23 |
ES2435430T3 (en) | 2013-12-19 |
US20110224251A1 (en) | 2011-09-15 |
TW200825094A (en) | 2008-06-16 |
AU2007311560B2 (en) | 2011-04-21 |
UY30641A1 (en) | 2008-05-31 |
ES2559521T3 (en) | 2016-02-12 |
US9938289B2 (en) | 2018-04-10 |
US20140031385A1 (en) | 2014-01-30 |
AU2007311560A1 (en) | 2008-04-24 |
EP2527345B1 (en) | 2015-12-16 |
KR20090066297A (en) | 2009-06-23 |
MX2009003157A (en) | 2009-04-03 |
EP2527345A1 (en) | 2012-11-28 |
US20160200735A1 (en) | 2016-07-14 |
US7964612B2 (en) | 2011-06-21 |
CA2666603C (en) | 2013-08-06 |
US9090625B2 (en) | 2015-07-28 |
US9260450B2 (en) | 2016-02-16 |
JP2010506895A (en) | 2010-03-04 |
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