WO2007109045A1 - Heterocyclic organic compounds for the treatment of in particular melanoma - Google Patents
Heterocyclic organic compounds for the treatment of in particular melanoma Download PDFInfo
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- WO2007109045A1 WO2007109045A1 PCT/US2007/006424 US2007006424W WO2007109045A1 WO 2007109045 A1 WO2007109045 A1 WO 2007109045A1 US 2007006424 W US2007006424 W US 2007006424W WO 2007109045 A1 WO2007109045 A1 WO 2007109045A1
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Classifications
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D401/00—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
- C07D401/02—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
- C07D401/04—Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings directly linked by a ring-member-to-ring-member bond
-
- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K31/00—Medicinal preparations containing organic active ingredients
- A61K31/33—Heterocyclic compounds
- A61K31/395—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins
- A61K31/495—Heterocyclic compounds having nitrogen as a ring hetero atom, e.g. guanethidine or rifamycins having six-membered rings with two or more nitrogen atoms as the only ring heteroatoms, e.g. piperazine or tetrazines
- A61K31/505—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim
- A61K31/506—Pyrimidines; Hydrogenated pyrimidines, e.g. trimethoprim not condensed and containing further heterocyclic rings
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Definitions
- the present invention relates to the discovery that certain compounds inhibit, regulate and/or modulate tyrosine and serine/threonine kinase and kinase-like proteins, such as RAF kinase, a serine/threonine kinase that functions in the MAP kinase signaling pathway, and is concerned with compositions which contain these compounds, and methods of using them to treat tyrosine and serine/threonine kinase and kinase-like dependent diseases, such as angiogenesis, cancer and cardiac hypertrophy.
- RAF kinase RAF kinase
- a serine/threonine kinase that functions in the MAP kinase signaling pathway
- the MAP kinase signaling pathway is known in the art as one of the pathways for growth factors to send their signal to proliferate from the extracellular environment to the cell nucleus.
- the growth factors activate transmembrane receptors located on the cell surface which in turn start a cascade whereby RAS is activated and recruits RAF kinase to the membrane where it is activated and in turn activates MEK kinase which then activates ERK kinase.
- Activated ERK kinase can move to the nucleus where it activates various gene transcription factors.
- RAF kinase Aberrations in this pathway can lead to altered gene transcription, cellular growth and contribute to tumorogenicity by negatively regulating apoptosis and transmitting proliferative and angiogenic signals.
- Inhibitors of RAF kinase have been shown to block signaling through the MAP kinase signaling pathway.
- the RAF kinase family is known to have three members designated C-RAF, also known as RAF- 1, B-RAF and A-RAF. It has been reported that B-RAF kinase is commonly activated by one of several somatic point mutations in human cancer, including 59% of the melanoma cell lines tested. See, Davies, H. et al, Nature 417, 949-954 (2002). This invention relates to the discovery of a class of compounds that efficiently inhibit one or more members of the RAF kinase family.
- the RAF kinase inhibiting property of the compounds makes them useful as therapeutic agents for the treatment for proliferative diseases characterized by an aberrant MAP kinase signaling pathway, particularly many cancers characterized by overexpression of RAF kinase or an activating mutation of RAF kinase, such as melanoma having mutated B-RAF, especially wherein the mutated B-RAF is the V599E mutant.
- the present invention also provides a method of treating other conditions characterized by an aberrant MAP kinase signaling pathway, particularly where B-RAF is mutated, for example benign Nevi moles having mutated B-RAF, with the compounds.
- a first aspect of the present invention provides a compound of formula (I)
- each of Ai, A 2 , A 3 , A 4 is independently selected from N or C-R 3 where R 3 represents H or a substituent moiety of C and where at least one Of A 1 , A 2 and A 4 is N;
- X is a linking moiety selected from N-H, substituted amino, O or S;
- R 1 is a substituent of the aromatic ring and n is an integer from 0 to 4;
- Y and D are independently selected from O, S, CH 2 , NH, R e -substituted C, or R 6 - substituted N,
- R 6 is a substituent of the ring which contains Y and D and r is an integer from 0 to the maximum number of available valencies of the ring;
- R 2 is a substituted or unsubstituted moiety selected from hydrocarbyl and heterocyclic;
- T is selected from H, halogen, O-R ⁇ , S-R 8 , SO-R 8 SO 2 -R 8 , SO 2 -N(R 8 ) 2 , SO 2 -N 3 R 10 and SO 2 - halogen, where R 8 is selected from hydrogen, substituted or unsubstituted aliphatic, cycloaliphatic, heterocyclyl or aryl; and R 9 is substituted or unsubstituted aliphatic, cycloaliphatic, or aryl, and N a and R 10 together represent a 4, 5, 6 ,7 or 8-membered heterocyclic ring including the nitrogen N a ; and p is an integer from 0 to 5.
- a second aspect of the invention provides a compound of formula (I)
- each of A 1 , A 2 , A 3 , A 4 is independently selected from N or C-R 3 where R 3 represents H or a substituent moiety of C and where at least one of Ai, A 2 and A 4 is N;
- X is a linking moiety selected from N-H, substituted amino, O or S;
- R 1 is a substituent of the aromatic ring and ⁇ is an integer from 0 to 4;
- Y and D are independently selected from O, S, CH 2 , NH, R 6 -substituted C, or R 6 - substituted N, R 6 is a substituent of the ring which contains Y and D and r is an integer from 0 to the maximum number of available valencies of the ring;
- R 2 is a substituted or unsubstituted moiety selected from hydrocarbyl and heterocyclic; T is selected from H, halogen, O-R ⁇ , S-R B , SO-R 8 SO 2 -R 8 , SO 2 -N(R 8 ) 2 , SO 2 -NR 10 and SO 2 - halogen, where R 8 is selected from hydrogen, substituted or unsubstituted aliphatic, cycloaliphatic, heterocyclyl or aryl; and R 9 is substituted or unsubstituted aliphatic, cycloaliphatic, or aryl, and NR 10 represents a heterocyclic ring including the nitrogen; and p is an integer from O to 5 and wherein the compound is not:
- R 1 is preferably selected from OH, O-alkyl, SH, S- alkyl, halogen, substituted or unsubstituted amine, CF 3 and C 1 -C 4 alkyl. Most preferably n is 1. '
- R 2 is preferably selected from substituted or unsubstituted aliphatic, alicyclic, or aromatic moieties such as cycloalkyl, heterocyclylalkyl, phenyl, pyrrole, imidazole, pyrazole, isoxazole, oxazole, thiazole, pyridazine, pyrimidine, pyrazine, pyridyl, indole, isoindole, indazole, purine, indolizidine, quinoline, isoquinoline, quinazoline, pteridine, qui ⁇ olizidi ⁇ e.
- R 2 is aromatic.
- R 2 is selected from substituted or unsubstituted phenyl, imidazolyl, pyrrolyl, oxazolyl and isoxazolyl, and especially R 2 is phenyl or substituted phenyl, wherein the substituent include lower alkyl(Ci-C 6 ), halogen, OH, lower alkoxy, NH 2 , SH, S-alkyl, SO-alkyl, SO 2 -alkyl, NH-alkyl, N-dialkyl, carboxyl or CF 3
- T may preferably be selected from halogen, O-alkyl, O-alkyl-halogen, SO 2 -R 8 , SO 2 -NHR 8 , SO 2 -NR 10 and SO 2 -halogen where halogen is preferably chlorine.
- R 8 and R 9 may preferably be independently selected from lower alkyl, especially C L C 2 , C 3 or C 4 alkyl, cycloalkyl, heterocyclolalkyl, lower alkenyl, lower alkynyl, lower alkoxy, especially methoxy or ethoxy, lower-alkanoyl, carboxy, amino, mono- or di- substituted amino, a cyclic group, for example phenyl, pyrrole, imidazole, pyrazole, isoxazole, oxazole, thiazole, pyridazine, pyrimidine, pyrazine, pyridyl, indole, isoindole, indazole, purine, indolizidine, quinoline, isoquinoline, quinazoline, piperidyl, pteridine, quinolizidine piperazinyl, pyrollidine, morpholinyl and thiomorpholinyl.
- R8 and R9 are substituted or unsubstituted alkyl or substituted or unsubstituted aryl.
- R8 may represent linear or branched alkyl, cycloalkyl, linear or branched halo-alkyl, alkoxy, carboxyalkyl, or alkylamino.
- R2 is phenyl and T is located para to the linking group X.
- T is O-R9 and R2 is phenyl, preferably T is located meta to the linking group X.
- T is a moiety selected from the formulae ( ⁇ ) to (x):
- Ai and A 2 are N, and A 3 and A 4 are C-R 3 . It is especially preferred that A 3 and A 4 are C-H.
- R 6 is preferably selected from OH, O-alkyl, SH, S-alkyl, halogen, CF 3 and C 1 -C 4 alkyl.
- R 1 is OH so that the moiety is a hydroxy tetrahydroquinoline, most especially 1 ,2,3,4- tetrahydroquinolin-5-ol (formula (I. Ill):
- Preferred compounds include compounds of the formulae (II), (III) and (IV):
- a 1 and A 2 are N, and A 3 and A 4 are C-R 3 .
- n 1
- Still further preferred compounds have the formula (IX)
- G represents R B , NHR 6 or NR 10 and preferably wherein X is NH; formula (Xl);
- T is O-R 9 .
- X is NH.
- a third aspect of the invention provides a process for the preparation of a compound of the formula: which process comprises the following reaction scheme:
- step 2 is optional and where carried out T' is a precursor of T, and R 1' is a precursor of R 1 or is R 1 and X, R 1 , R 2 , T and P are as defined in claim 1.
- X is NH.
- R 2 is phenyl.
- p is 1.
- R 1 ' is OH.
- T represents SO 2 -G where G represents R 8 , NHR 8 or NR 10 and R 8 and R 10 are as defined in the first aspect of the invention.
- T represents O-R 9 where R 9 is as defined in the first aspect of the invention.
- X-R 2 -(T) P represents
- Another aspect of the present invention is a compound of formula (I) 1 wherein
- a 1 , A 2 , A 3 and A 4 are N or CR 3 , and where at least one of Ai , A 2 and A 4 is N;
- X is N-R 5 , O or S;
- R 1 is OH, -O-alkyl, -SH, -S-alkyl, halogen, substituted or unsubstituted amines, -CF 3 or -C- ⁇ -C 4 -alkyl;
- Y is O, S, CR 5 or NR 5
- D is O, S, CR 5 or NR 5 ;
- R 2 is an alkyl, alicycle, heterocycle, aliaromatic, hetereoaromatic all of which may be substituted or unsubstituted;
- T is H, -SO 2 -NH-R 4 Or -SO 2 -R 4 ;
- R 4 is H, alkyl or aryl, which may be substituted or unsubstituted;
- R 5 is H or alky or C(O)-O-C-Ph; n is 0-4; or a tautomer thereof, or a salt thereof.
- Special preference is given to a compound of formula (I), wherein
- a 3 and A 4 are CH;
- Y is CH 2 or NR 5 such as -NH-C(O)-O-C-Ph;
- X is NH;
- D is CH 2 ;
- R 1 is OH, Cl, Me or F
- R 2 is phenyl, imidazolyl, pyrrolyl, oxazolyl or isoxzole, where phenyl may be unsubstituted or substituted with 1 , 2 or 3 -OMe groups, Cl, CF 3 , -SMe, OH, -O-[CH 2 ] 2 -py ⁇ ' dine,
- R 4 is H 1 C 2 NMe, C 2 OH, -Npipeidinyl, Me, Me(t-butyl), C 2 COOH or ethyl(isopropyl);
- R 5 is H; n is O or 1 ; or a tautomer thereof, or a salt thereof.
- Hydrocarbyl may. be defined as having preferably up to 20 carbon atoms, especially up to 12 carbon atoms.
- Hydrocarbyl groups may be linear or branched aliphatic, e.g. alkyl, alkenyl or alkynyl; they may be alicyclic (i.e. aliphatic-cyclic), e.g. cycloalkyl; they may be aromatic, e.g. phenyl.
- Hydrocarbyl groups may contain a combination of two or more moieties selected from aliphatic, alicyclic and aromatic moieties, e.g. a combination of at least one alkyl group and an aromatic group.
- hydrocarbyl groups may be optionally interrupted by one or more in-chain heteroatoms, for example -O-, thus forming, for example, an ether linkage.
- a mono- or di- substituted amino moiety may be defined where the amino is optionally substituted by a hydrocarbyl moiety, the hydrocarbyl moiety being, for example, selected from lower alkyl, especially C 1 , C 2 , C 3 or C 4 alkyl, cycloalkyl, especially cyclohexyl, alkyl-carboxy, carboxy, lower alkanoyl, especially acetyl, a carbocyclic group, for example cyclohexyl or phenyl, a heterocyclic group; where the hydrocarbyl moiety is unsubstituted or substituted by, for example lower alkyl (Ci, C 2 , C 3 , C 4 , C 5 , C 5 or C 7 ), halogen, OH, lower alkoxy, NH 2 , SH, S-alkyl, SO-alkyl, SO 2 -alkyl, NH-alkyl, N-dialkyl, carboxyl, CF
- mercapto defines moieties of the general structure -S- R ⁇ wherein R e is selected from H, alkyl, a carbocylic group and a heterocyclic group as described herein.
- guanidino defines moieties of the general structure - NHR-C(NH)NH 2 and derivatives thereof, in particular, where hydrogen is replaced by alkyl, e.g. methyl or ethyl.
- amidino defines moieties of the general structure - C(NH)NH 2 and derivatives thereof, in particular, where hydrogen is replaced by alkyl, e.g. methyl or ethyl.
- Alkyl preferably has up to 20, more preferably up to 12 carbon atoms and is linear or branched one or more times; preferred is lower alkyl, especially preferred is C 1 -C 4 - alkyl, in particular methyl, ethyl or i-propyl or t-butyl. Where alkyl may be substituted by one or more substituents. Unsubstituted alkyl, preferably lower alkyl, is especially preferred.
- Aikyl may be optionally interrupted by one or more in-chain heteroatoms, for example -O-, thus forming, for example, an ether linkage.
- Substituted alkyl is alkyl as last defined, especially lower alkyl, preferably methyl; where one or more, especially up to three, substitue ⁇ ts may be present, primarily from the group selected from halogen, especially fluorine, amino, N-lower alkylamino, N 1 N- di-lower alkylamino, N-lower alkanoylamino, hydroxy, cya ⁇ o, carboxy, lower alkoxycarbonyl, and phenyl-lower alkoxycarbonyl.
- Trifluoromethyl is especially preferred.
- One class of compounds includes a substituted alkyl where the alkyl is substituted with a heterocyclic ring, for example a pyrazine ring, thus forming an alkylene-het group, i.e. - CH 2 -Het, the alkyl group effectively acting as a linker between the heterocycle and a second moiety.
- alkyl portion of lower alkyl, lower alkoxy, mono- or di-lower alkyl amino, lower alkyl thio and other substituents with an alkyl portion is especially C 1 -C 4 alkyl, for example n-butyl, sec-butyl, tert-butyl, n-propyl, isopropyl, methyl or ethyl.
- Such alkyl substituents are unsubstituted or substituted by halogen, hydroxy, nitro, cyano, lower alkoxy, C 3 , C 4 , C 5 , C 6 or C 7 cycloalkyl, amino, or mono- or di-lower alkyl amino, unless otherwise indicated.
- Halo-lower alkyl, halo-lower alkyloxy, halo-lower alkylthio and the like refer to substituents having an alkyl portion wherein the alkyl portion is mono- to completely substituted by halogen.
- Halo-lower alkyl, halo-lower alkyloxy, halo-lower alkylthio and the like are included within substituted lower alkyl, substituted lower alkoxy, substituted lower alkylthio and the like.
- hydroxy-lower alkyl especially 2-hydroxyethyl, and/or halo-lower alkyl, especially trifluoromethyl or 2,2,2- trifluoroethyl, are especially preferred.
- An alicyclic group is a carbocyclic group especially which comprises 3, 4, 5, 6 or 7 in ring carbon atoms and is non aromatic, but may be saturated or unsaturated.
- Preferred alicyclic groups comprise cycloalkyl groups, which are preferably C3-C10- cycloalkyl, especially cyclopropyl, dimethylcyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl or cycloheptyl, cycloalkyl being unsubstituted or substituted by one or more, especially 1 , 2 or 3, substituents.
- An aromatic group is heterocyclic or carbocyclic and is bound via a bond located at an aromatic ring carbon atom of the radical (or optionally bound via a linking group, such as -O- or -CH 2 -).
- the aromatic group is carbocyclic and has a ring system of not more than 16 carbon atoms and is preferably mono- bi- or tri- cyclic and may be fully or partially substituted, for example substituted by at least two substituents.
- the aromatic group is selected from phenyl, naphthyl, i ⁇ denyl, azulenyl and anthryl, and is preferably in each case unsubstituted or substituted by lower alkyl, especially methyl, ethyl or n-propyl, halo (especially fluoro, chloro, bromo or iodo), halo- lower alkyl (especially trifluoromethyl), hydroxy, tower alkoxy (especially methoxy), halo- lower alkoxy (especially 2,2,2-trifluoroethoxy), amino-lower alkoxy (especially 2-amino- ethoxy), lower alkyl (especially methyl or ethyl) carbamoyl, N-(hydroxy-lower alkyl)- carbamoyl (especially N-(2-hydroxyethyl)-carbamoyl) and/or sulfamoyl-substituted aryl, especially a corresponding substitute
- a substituted aromatic group is generally an aromatic group that is substituted with from 1-5, preferably 1 or 2, substituents.
- Appropriate substituents include, but are not limited to, amino, mono- or di-lower alkyl substituted amino, wherein the lower alkyl substituents may be unsubstituted or further substituted by those substitutents listed above for alkyl groups, halogen, lower alkyl, substituted lower alkyl, hydroxy, lower alkoxy, substituted lower alkoxy, nitro, cyano, mercapto, lower alkylthio, halo-lower alkylthio, heterocyclyl, heteroaryl, heterocyclylalkyl, heteroarylalkyl, lower alkanoyl, carbamoyl, and N-mono- or N,N-di-lower alkyl substituted carbamoyl, wherein the lower alkyl substitents may be unsubstituted or further substituted.
- a heterocycle is an aromatic ring or ring system having 16 or fewer members, preferably a ring of 5 to 7 members. Heterocycle also includes a three to ten membered non-aromatic ring or ring system and preferably a five- or six-membered non-aromatic ring, which may be fully or partially saturated. In each case the rings may have 1 , 2 or 3 hetero atoms selected from the group consisting of nitrogen, oxygen and sulfur.
- the heterocycle is unsubstituted or substituted by one or more, especially from one to three, for example one, identical or different substituents.
- halogen for example, fluorine or chlorine
- mono- or di-lower alkyl-substituted amino wherein the alkyl groups are unsubstituted or substituted by halogen, hydroxy, nitro, cyano, lower alkoxy, C 3 -C 7 cycloalkyl, a heterocyclic radical or a heteroaryl radical
- lower alkyl such as methyl or ethyl
- halo-lower alkyl such as trifluoromethyl
- lower alkoxy such as methoxy or ethoxy
- halo-lower alkoxy for example, trifluoromethoxy
- lower alkylthio such as methylmercapto, halo-lower alkylthio, such as trifluoromethylthio, a heteroaryl radical, heteroaryl-lower-alkylene, a heterocyclic radical or heterocyclic-lower-alkylene.
- Heterocycle especially is a radical selected from the group consisting of oxiranyl, azirinyl, 1,2-oxathiolanyl, imidazolyl, thienyl, furyl, tetrahydrofuryl, pyranyl, thiopyranyl, thianthrenyl, isobenzofuranyl, benzofuranyl, chromenyl, 2/-/-pyrrolyl, pyrrolyl, pyrrolinyl, pyrrolidinyl, imidazolyl, imidazolidinyl, benzimidazolyl, pyrazolyl, pyrazinyl, pyrazolidinyl, pyranyol, thiazolyl, isothiazolyl, dithiazolyl, oxazolyl, isoxazolyl, pyridyl, pyrazinyl, pyrimidinyl, piperidyl, especially piperidi ⁇ -1-yl, piperidyl
- Halogen is especially fluorine, chlorine, bromine or iodine, more especially fluorine, chlorine or bromine, in particular fluorine.
- Cycloalkyl is preferably C 3 -C 10 -cycloalkyl, especially cyclopropyl, dimethylcyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl or cycloheptyl, cycloalkyl being unsubstituted or substituted by one or more, especially 1 to 3, substituents.
- Heterocyclylalkyl is as cycloalkyl but containing one or more in-ring heteroatoms and may be exemplified by piperidyl, piperazinyl, pyrollidine, morpholinyl.
- Esterified carboxy is especially lower alkoxycarbonyl, such as tert- butoxycarbonyl, iso-propoxycarbonyl, methoxycarbonyl or ethoxycarbonyl, phenyl-lower alkoxycarbonyl, or phenyloxycarbonyl.
- lower alkoxycarbonyl such as tert- butoxycarbonyl, iso-propoxycarbonyl, methoxycarbonyl or ethoxycarbonyl, phenyl-lower alkoxycarbonyl, or phenyloxycarbonyl.
- Alkanoyl is primarily alkylcarbonyl, especially lower alkanoyl, e.g. acetyl.
- the alkanoyl group may be substituted by substituents, e.g. CO-R
- Any asymmetric carbon atoms may be present in the (R)-, (S)- or (Reconfiguration, preferably in the (R)- or (S)-configuration. Radicals having any unsaturation are present in cis-, trans- or (cis, trans) form.
- the compounds may thus be present as mixtures of isomers or as pure isomers, preferably as enantiomer-pure diastereomers.
- the invention relates also to possible tautomers of the disclosed compounds.
- Stereoisomeric mixtures e.g. mixtures of diastereomers
- Diastereomeric mixtures for example may be separated into their individual diastereomers by means of fractionated crystallization, chromatography, solvent distribution, and similar procedures. This separation may take place either at the level of a starting compound or in a compound of Formula I or formulae Il to XII respectively.
- Enantiomers may be separated through the formation of diastereomeric salts, for example by salt formation with an enantiomer-pure chiral acid, or by means of chromatography, for example by HPLC, using chromatographic substrates with chiral ligands.
- Salts are especially the pharmaceutically acceptable acid addition salts of compounds of formula (I).
- Such salts are formed, for example, by compounds of formula (I) having a basic nitrogen atom as acid addition salts, preferably with organic or inorganic acids, especially the pharmaceutically acceptable salts.
- Suitable inorganic acids are, for example, hydrohalic acids, such as hydrochloric acid; sulfuric acid; or phosphoric acid.
- Suitable organic acids are, for example, carboxylic, phosphonic, sulfonic or sulfamic acids, for example acetic acid, propionic acid, octanoic acid, decanoic acid, dodecanoic acid, glycoiic acid, lactic acid, 2-hydroxybutyric acid, gluconic acid, glucosemonocarboxylic acid, fumaric acid, succinic acid, adipic acid, pimelic acid, suberic acid, azelaic acid, malic acid, tartaric acid, citric acid, glucaric acid, galactaric acid, amino acids, such as glutamic acid, aspartic acid, N-methylglycine, acetylaminoacetic acid, N-acetylasparagine, N- acetylcysteine, pyruvic acid, acetoacetic acid, phosphoserine, 2- or 3-glycerophosphoric acid, maleic acid, hydroxymaleic acid, methylmaleic
- the compounds of the present invention are found to inhibit, regulate and/or modulate tyrosine and serine/threonine kinase and kinase-like proteins involved in signal transduction, and compositions containing the compounds are used in the treatment of tyrosine and serine/threonine kinase and kinase-like-dependent diseases, such as angiogenesis, cancer, tumour growth, atherosclerosis, age related macular degeneration, diabetic retinopathy, inflammatory diseases, ⁇ eurotraumatic diseases, chronic neurodegeneration, pain, migraine or cardiac hypertrophy, and the like in mammals.
- diseases such as angiogenesis, cancer, tumour growth, atherosclerosis, age related macular degeneration, diabetic retinopathy, inflammatory diseases, ⁇ eurotraumatic diseases, chronic neurodegeneration, pain, migraine or cardiac hypertrophy, and the like in mammals.
- the compounds of the present invention inhibit IKK, PDGF-R, Kdr, c-Src, HeM 1 Her-2, c-Klt, C-AbI, Ins-r, Tek, FIt-I , Flt-3, Flt-4, c-Abi and FGFR-1 , Eph receptors (e.g. EphB4), CDK1 , CDK2 and RET at >70% inhibition at 10 micromole. More specifically, the compounds inhibit the RAF family of kinases including mutations with IC50 values in the range of 1 -1000 nM.
- the patient is a mammal, generally a human, suffering from a disease that is characterized by excessive signaling through the MAP kinase pathway. This can be measured by activation state specific antibodies to pathway members by methods such as Western blot analysis or immunohistochemistry. Such methods are known to those of skill in the art.
- the disease characterized by excessive signaling through the MAP kinase signaling pathway is a proliferative disease, particularly a cancer characterized by increased RAF kinase activity, for example one which overexpresses wild-type B- or C- RAF kinase, or that expresses an activating mutant RAF kinase, for example a mutant B- RAF kinase.
- Cancers wherein a mutated RAF kinase has been detected include melanoma, colorectal cancer, ovarian cancer, gliomas, adenocarcinomas, sarcomas, breast cancer and liver cancer.
- Mutated B-RAF kinase is especially prevalent in many melanomas.
- a sample of diseased tissue may taken from the patient, for example, as a result of a biopsy or resection, and tested to determine whether the tissue produces a mutant RAF kinase, such as a mutant B-RAF kinase or overexpresses a wild-type RAF kinase, such as wild-type B- or C-RAF kinase. If the test indicates that mutant RAF kinase is produced or that a RAF kinase is overproduced in the diseased tissue, the patient is treated by administration of an effective RAF-inhibiting amount of a RAF inhibitor compound described herein.
- the present invention further relates to the treatment of a disease characterized by excessive signaling in the MAP kinase signaling pathway attributed to a cause other than an activating mutation in or overexpression of a RAF kinase.
- Tissue samples are tested by methods generally known in the art.
- B-RAF mutations are detected by allele specific PCR, DHPLC, mass spectropscopy and overexpression of wild-type B- or C-RAF detected by immunohistochemistry, immunofluorescense, or Western blot analysis.
- a particularly useful method of detecting B- RAF mutations is a polymerase chain reaction based method. Similar methods are used to determine whether other kinases in the cascade are mutant or overexpressed.
- a particularly important aspect of this invention relates to a method of treating melanoma, which comprises (a) testing melanoma tissue from a patient to determine whether the melanoma tissue expresses mutant RAF kinase or overexpresses a wild-type RAF kinase and (b) treating the patient with an effective RAF kinase inhibiting amount of a RAF-i ⁇ hibiti ⁇ g compound described herein if the melanoma tissue is found to overexpress a wild type RAF kinase or express an activating mutant B-RAF kinase.
- An important aspect of this embodiment relates to a method of treating melanoma, which comprises (a) testing melanoma tissue from a patient to determine whether the melanoma tissue overexpresses B-RAF kinase or C-RAF kinase activity and (b) treating the patient with an effective RAF kinase inhibiting amount of a RAF inhibiting compound described herein if the melanoma tissue is found to overexpress the B-RAF kinase or C-RAF kinase activity.
- Another important aspect of this embodiment relates to a method of treating melanoma, which comprises (a) testing melanoma tissue from a patient to determine whether the melanoma tissue expresses mutant B-RAF kinase and (b) treating the patient with an effective RAF kinase inhibiting amount of a RAF inhibiting compound described herein if the melanoma tissue is found to express mutant B-RAF kinase.
- the B-RAF kinase mutation is one of those described in the Davies et al article cited. These mutations are summarized in Table 1.
- the present invention particularly relates to a method of treating a disease characterized by an activated mutant B-RAF kinase, which comprises detecting a mutation in the B-RAF kinase gene or protein in a tissue sample from a patient and treating the patient with an effective B-RAF kinase inhibiting compound, especially a compound described herein.
- the present invention additionally relates to a compound (for example of formulae I to XII) for use in the treatment of melanoma. More particularly, the invention relates to a compound for use in the treatment of a disease characterized by an activated mutant B-RAF kinase.
- the invention provides for the use of a compound (for example of formulae I to XII) in the manufacture of a medicament for use in the treatment of melanoma. More specifically, the invention provides for the use of a compound in the manufacture of a medicament for use in the treatment of a disease characterized by an activated mutant B-RAF kinase.
- An important aspect of this invention includes those instances wherein the mutant B-RAF kinase exhibits a mutation described in Table 1 , especially the V599E mutation.
- a particularly important aspect of this invention includes those instances wherein disease is melanoma and the mutant B-RAF kinase exhibits a mutation described in Table 1 , especially the V599E mutation.
- this invention includes a method of treating a disease characterized by mutant B-RAF kinase, which comprises detecting a mutation in the B-RAF kinase gene selected from G1388A, G1388T, G1394C, G1394A, G1394T, G1403C, G1403A, G1753A, T1782G, G1783C, C1786G, T1787G, T1796A and TG1796-97AT, or corresponding mutation in the RAF.
- kinase protein in a tissue sample from a patient and treating the patient with an effective B-RAF kinase inhibiting compound described herein.
- the present invention further relates to a method of inhibiting RAF kinase, which comprises contacting the RAF kinase with a compound of formula (I), or more specifically with any one of the compounds of formulae (II) to (XII).
- the RAF kinase is B- or C-RAF kinase, or a mutant RAF kinase, especially a mutant B-RAF kinase, particularly the V599E mutant.
- the RAF kinase may be isolated or in a cellular environment.
- the compounds of formula (I), and more specifically the compounds of formulae (II) to (XII) have valuable pharmacological properties, as described above.
- the compounds of the present invention may be administered alone or in combination with other anticancer agents, such as compounds that inhibit tumor angiogenesis, for example, the protease inhibitors, epidermal growth factor receptor kinase inhibitors, vascular endothelial growth factor receptor kinase inhibitors and the like; cytotoxic drugs, such as antimetabolites, like purine and pyrimidine analog antimetabolites; antimitotic agents like microtubule stabilizing drugs and antimitotic alkaloids; platinum coordination complexes; anti-tumor antibiotics; alkylating agents, such as nitrogen mustards and nitrosoureas; endocrine agents, such as adrenocorticosteroids, androgens, anti-androgens, estrogens, anti-estrogens, aromatase inhibitors, gonadotropin-releasing hormone agonists and somatostatin analogues and compounds that target an enzyme or receptor that is overexpressed and/or otherwise involved a specific metabolic pathway that is upregulated in
- the compound of the present invention may also be administered together with radiotherapy, immunotherapy, surgical treatment or combinations thereof. Treatment to maintain the status of a patient after tumor remission or even chemopreventive treatment, for example in the case of at-risk patients, is also possible.
- Compounds according to the invention are intended not only for the (prophylactic and, preferably, therapeutic) treatment of human beings, but also for the treatment of other warm-blooded animals, for example of commercially useful animals, for example rodents, such as mice, rabbits or rats, or guinea pigs.
- the invention relates also to the use of a compound of formula (I), and more specifically to the use of compounds of formulae (II) to (XII), in inhibiting RAF kinase activity.
- the compounds of the present invention are preferably administered as an active ingredient in a pharmaceutical composition.
- a pharmaceutical composition which is suitable for administration to a warm-blooded animal, especially a human being or a commercially useful mammal, which is suffering from a disease characterized by an aberrant MAP kinase signaling pathway especially, a tumor disease, most particularly melanoma, comprising a compound of formula (I), or a pharmaceutically acceptable salt thereof where salt-forming groups are present, in an amount that is effective in inhibiting RAF kinase, particularly a mutant RAF kinase, together with at least one pharmaceutically acceptable carrier.
- a pharmaceutical composition for the prophylactic or, especially, therapeutic treatment of tumor diseases and other proliferative diseases in a warm-blooded animal, especially a human being or a commercially useful mammal, which requires such treatment, especially which is suffering from such a disease comprising a novel compound of formula (I), or a pharmaceutically acceptable salt thereof, as active ingredient in an amount that is effective prophylactically or, especially, therapeutically against the mentioned diseases.
- compositions comprise from approximately 1 % to approximately 95 % active ingredient, dosage forms that are in single dose form preferably comprising from approximately 20 % to approximately 90 % active ingredient, and dosage forms that are not in single dose form preferably comprising from approximately 5 % to approximately 20 % active ingredient.
- Unit dose forms are, for example, dragees, tablets, ampoules, vials, suppositories or capsules.
- Other dosage forms are, for example, ointments, creams, pastes, foams, tinctures, lipsticks, drops, sprays, dispersions, etc. Examples are capsules comprising from approximately 0.05 g to approximately 1.0 g of the active ingredient.
- the pharmaceutical compositions of the present invention are prepared in a manner employing steps which may individually be known per se, for example by means of conventional mixing, granulating, confectioning, dissolving or lyophilising processes.
- Solutions of the active ingredient are preferably used, in addition also suspensions or dispersions, especially isotonic aqueous solutions, dispersions or suspensions, which, in the case of, for example, lyophilised compositions which contain the active substance alone or together with a carrier, for example mannitol, can be prepared prior to use.
- the pharmaceutical compositions may be sterilised and/or comprise excipients, for example preservatives, stabilisers, wetting agents and/or emulsifiers, solubilisers, salts for regulating the osmotic pressure and/or buffers, and are prepared in a manner known per se, for example by means of conventional dissolving or lyophilising processes.
- the mentioned solutions or suspensions may comprise viscosity-increasing substances, such as sodium carboxymethylcellulose, carboxymethylcellulose, dextran, polyvinylpyrrolidone or gelatin, or solubilisers, for example Tween 80 [polyoxyethylene(20)sorbitan monooleate, trade mark of ICI Americas, Inc, USA].
- viscosity-increasing substances such as sodium carboxymethylcellulose, carboxymethylcellulose, dextran, polyvinylpyrrolidone or gelatin, or solubilisers, for example Tween 80 [polyoxyethylene(20)sorbitan monooleate, trade mark of ICI Americas, Inc, USA].
- Suspensions in oil comprise as the oily component the vegetable, synthetic or semi-synthetic oils customary for injection purposes.
- liquid fatty acid esters which comprise as the acid component a long-chained fatty acid having from 8 to 22, especially from 12 to 22, carbon atoms, for example lauric acid, tridecylic acid, myristic acid, pe ⁇ tadecylic acid, palmitic acid, margaric acid, stearic acid, arachidic acid, behenic acid or corresponding unsaturated acids, for example oleic acid, elaidic acid, erucic acid, brassidic acid or linoleic acid, optionally with the addition of antioxidants, for example vitamin E, ⁇ -carotene or 3,5-di-tert-butyl-4-hydroxytoluene.
- the alcohol component of those fatty acid esters has a maximum of 6 carbon atoms and is a mono- or poly-hydric, for example mono-, di- or tri-hydric, alcohol, for example methanol, ethanol, propanol, butanol or pentanol or their isomers, but especially glycol and glycerol.
- fatty acid esters which may be mentioned are, therefore: ethyl oleate, isopropyl myristate, isopropyl palmitate, "Labrafil M 2375” (polyoxyethyleneglycerol trioleate from Gattefosse, Pans), “Labrafil M 1944 CS” (unsaturated polyglycolised glycerides prepared by alcoholysis of apricot kernel oil and composed of glycerides and polyethylene glycol ester; Gattefosse, France), “Labrasol” (saturated polyglycolised glycerides prepared by alcoholysis of TCM and composed of glycerides and polyethylene glycol ester; Gattefosse, France) and/or "Miglyol 812” (triglyceride of saturated fatty acids having a chain length of from C 8 to C 12 from HCiIs AG, Germany), but especially vegetable oils, such as cottonseed oil, almond oil, olive oil, castor oil, sesame oil
- compositions for oral administration can be obtained, for example, by combining the active ingredient with one or more solid carriers, granulating a resulting mixture, where appropriate, and processing the mixture or granules, if desired, where appropriate by addition of additional excipients, to tablets or dragee cores.
- Suitable carriers are especially fillers, such as sugars, for example lactose, saccharose, mannitol or sorbitol, cellulose preparations and/or calcium phosphates, for example tricalcium phosphate or calcium hydrogen phosphate, also binders, such as starches, for example corn, wheat, rice or potato starch, methylcellulose, hydroxypropylmethylcellulose, sodium carboxymethylcellulose and/or polyvinylpyrrolidone, and/or, if desired, disintegrators, such as the above-mentioned starches, also carboxymethyl starch, crosslinked polyvinylpyrrolidone, alginic acid or a salt thereof, such as sodium alginate.
- Additional excipients are especially flow conditioners and lubricants, for example silicic acid, talc, stearic acid or salts thereof, such as magnesium or calcium stearate, and/or polyethylene glycol, or derivatives thereof
- Dragee cores can be provided with suitable, optionally enteric, coatings, there being used inter alia concentrated sugar solutions which may contain gum arabic, talc, polyvinylpyrrolidone, polyethylene glycol and/or titanium dioxide, or coating solutions in suitable organic solvents or solvent mixtures or, for the preparation of enteric coatings, solutions of suitable cellulose preparations, such as acetylcellulose phthalate or hydroxypropylmethylcellulose phthalate. Colourings or pigments may be added to the tablets or dragee coatings, for example for identification purposes or to indicate different doses of active ingredient.
- suitable, optionally enteric, coatings there being used inter alia concentrated sugar solutions which may contain gum arabic, talc, polyvinylpyrrolidone, polyethylene glycol and/or titanium dioxide, or coating solutions in suitable organic solvents or solvent mixtures or, for the preparation of enteric coatings, solutions of suitable cellulose preparations, such as acetylcellulose phthalate or hydroxypropylmethylcellulose phthalate. Colouring
- compositions for oral administration are also hard gelatin capsules and soft sealed capsules consisting of gelatin and a plasticiser, such as glycerol or sorbitol.
- the hard gelatin capsules may contain the active ingredient in the form of granules, for example in admixture with fillers, such as corn starch, binders and/or glidants, such as talc or magnesium stearate, and optionally stabilisers.
- the active ingredient is preferably dissolved or suspended in suitable liquid excipients, such as fatty oils, paraffin oil or liquid polyethylene glycols or fatty acid esters of ethylene glycol or propylene glycol, it likewise being possible to add stabilisers and detergents, for example of the polyoxyethylenesorbitan fatty acid ester type.
- suitable liquid excipients such as fatty oils, paraffin oil or liquid polyethylene glycols or fatty acid esters of ethylene glycol or propylene glycol, it likewise being possible to add stabilisers and detergents, for example of the polyoxyethylenesorbitan fatty acid ester type.
- Suitable rectally administrable pharmaceutical compositions are, for example, suppositories that consist of a combinatio n of the active ingredient with a suppository base.
- Suitable suppository bases are, for example, natural or synthetic triglycerides, paraffin hydrocarbons, polyethylene glycols or higher alkanols.
- aqueous solutions of an active ingredient in water-soluble form for example in the form of a water-soluble salt, or aqueous injection suspensions that comprise viscosity-increasing substances, for example sodium carboxymethylcellulose, sorbitol and/or dextran and, if desired, stabilisers.
- the active ingredient optionally together with excipients, can also be in the form of a lyophilisate and can be made into a solution prior to parenteral administration by the addition of suitable solvents.
- Solutions used, for example, for parenteral administration can also be used as infusion solutions.
- Preferred preservatives are, for example, antioxidants, such as ascorbic acid, or microbicides, such sorbic acid or benzoic acid.
- the invention relates especially to a process or a method for treating one of the pathological conditions that is characterized by an aberrant MAP kinase signaling pathway, especially a disease responsive to inhibition of RAF kinase, especially a corresponding tumor disease.
- the compounds of formula (I) can be administered prophylactically or therapeutically as such or in the form of pharmaceutical compositions, preferably in an amount that is effective against the mentioned diseases, to a warm-blooded animal, for example a human being, requiring such treatment, the compounds being used especially in the form of pharmaceutical compositions.
- a daily dose of from approximately 0.1 g to approximately 5 g, preferably from approximately 0.5 g to approximately 2 g, of a compound of the present invention is administered
- R group is one containing sulphur, as illustrated below in Schemes 1 and 2:
- the crude material is purified first by flash chromatography on silica gel using ethyl acetate and then by MPLC on a reverse phase column using an acetonitrile/water gradient containing 0.5% TFA.
- the title compound is obtained in 6% yield (25 mg): m.p. 242-245 0 C; MS (ES+) m/z (M + H) +1 353.
- the mentioned substances are pulverized and forced through a sieve of 0.6 mm mesh size. 0.33 g portions of the mixture are introduced into gelatin capsules using a capsule-filling machine.
- composition active ingredient 25O g PEG 400 1 L Tween 80 1 L
- the active ingredient is pulverized and suspended in PEG 400 (polyethylene glycol having an Mr of from approximately 380-420, Fluka, Switzerland) and Tween ® 80 (polyoxyethylene sorbitan monolaurate, Atlas Chem. Ind. Inc., USA, supplied by Fluka, Switzerland) and ground in a wet pulverizer to a particle size of approximately from 1 -3 ⁇ m. 0.43 g portions of the mixture are then introduced into soft gelatin capsules using a capsule-filling machine.
- PEG 400 polyethylene glycol having an Mr of from approximately 380-420, Fluka, Switzerland
- Tween ® 80 polyoxyethylene sorbitan monolaurate, Atlas Chem. Ind. Inc., USA, supplied by Fluka, Switzerland
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Priority Applications (7)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU2007227602A AU2007227602A1 (en) | 2006-03-16 | 2007-03-14 | Heterocyclic organic compounds for the treatment of in particular melanoma |
US12/293,257 US20090069360A1 (en) | 2006-03-16 | 2007-03-14 | Organic Compounds |
MX2008011661A MX2008011661A (en) | 2006-03-16 | 2007-03-14 | Heterocyclic organic compounds for the treatment of in particular melanoma. |
BRPI0710181-3A BRPI0710181A2 (en) | 2006-03-16 | 2007-03-14 | organic compounds |
CA002644356A CA2644356A1 (en) | 2006-03-16 | 2007-03-14 | Heterocyclic organic compounds for the treatment of in particular melanoma |
EP07753076A EP2001864A1 (en) | 2006-03-16 | 2007-03-14 | Heterocyclic organic compounds for the treatment of in particular melanoma |
JP2009500458A JP2009530288A (en) | 2006-03-16 | 2007-03-14 | Heterocyclic organic compounds, especially for the treatment of melanoma |
Applications Claiming Priority (2)
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US78317506P | 2006-03-16 | 2006-03-16 | |
US60/783,175 | 2006-03-16 |
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EP (1) | EP2001864A1 (en) |
JP (1) | JP2009530288A (en) |
KR (1) | KR20090052301A (en) |
CN (1) | CN101563336A (en) |
AU (1) | AU2007227602A1 (en) |
BR (1) | BRPI0710181A2 (en) |
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US11472802B2 (en) | 2018-01-18 | 2022-10-18 | Array Biopharma Inc. | Substituted pyrazolyl[4,3-c]pyridine compounds as RET kinase inhibitors |
US11603374B2 (en) | 2018-01-18 | 2023-03-14 | Array Biopharma Inc. | Substituted pyrrolo[2,3-d]pyrimidines compounds as ret kinase inhibitors |
WO2020055672A1 (en) | 2018-09-10 | 2020-03-19 | Array Biopharma Inc. | Fused heterocyclic compounds as ret kinase inhibitors |
US11964988B2 (en) | 2018-09-10 | 2024-04-23 | Array Biopharma Inc. | Fused heterocyclic compounds as RET kinase inhibitors |
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Also Published As
Publication number | Publication date |
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US7955870B2 (en) | 2011-06-07 |
US20100022030A1 (en) | 2010-01-28 |
KR20090052301A (en) | 2009-05-25 |
EP2001864A1 (en) | 2008-12-17 |
WO2007109045A8 (en) | 2009-07-02 |
RU2008140382A (en) | 2010-04-27 |
US20090069360A1 (en) | 2009-03-12 |
AU2007227602A1 (en) | 2007-09-27 |
JP2009530288A (en) | 2009-08-27 |
CN101563336A (en) | 2009-10-21 |
BRPI0710181A2 (en) | 2011-08-09 |
MX2008011661A (en) | 2008-09-22 |
CA2644356A1 (en) | 2007-09-27 |
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