WO2006133588A1 - ARYL UREA COMPOUNDS AS β-SECRETASE INHIBITORS - Google Patents

ARYL UREA COMPOUNDS AS β-SECRETASE INHIBITORS Download PDF

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WO2006133588A1
WO2006133588A1 PCT/CH2006/000316 CH2006000316W WO2006133588A1 WO 2006133588 A1 WO2006133588 A1 WO 2006133588A1 CH 2006000316 W CH2006000316 W CH 2006000316W WO 2006133588 A1 WO2006133588 A1 WO 2006133588A1
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Prior art keywords
alkyl
pharmaceutically acceptable
acceptable salts
halogen
secretase inhibitor
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PCT/CH2006/000316
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French (fr)
Inventor
Urs LÜTHI
Danzhi Huang
Peter Kolb
Marco Cecchini
Nicolas Majeux
Fabian Dey
Stephan Valentin Audetat
Amedeo Caflisch
Alcide Barberis
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Oncalis Ag
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Priority claimed from EP05012616A external-priority patent/EP1734039A1/en
Application filed by Oncalis Ag filed Critical Oncalis Ag
Publication of WO2006133588A1 publication Critical patent/WO2006133588A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D249/00Heterocyclic compounds containing five-membered rings having three nitrogen atoms as the only ring hetero atoms
    • C07D249/02Heterocyclic compounds containing five-membered rings having three nitrogen atoms as the only ring hetero atoms not condensed with other rings
    • C07D249/081,2,4-Triazoles; Hydrogenated 1,2,4-triazoles
    • C07D249/101,2,4-Triazoles; Hydrogenated 1,2,4-triazoles with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D249/12Oxygen or sulfur atoms
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/28Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C275/00Derivatives of urea, i.e. compounds containing any of the groups, the nitrogen atoms not being part of nitro or nitroso groups
    • C07C275/28Derivatives of urea, i.e. compounds containing any of the groups, the nitrogen atoms not being part of nitro or nitroso groups having nitrogen atoms of urea groups bound to carbon atoms of six-membered aromatic rings of a carbon skeleton
    • C07C275/40Derivatives of urea, i.e. compounds containing any of the groups, the nitrogen atoms not being part of nitro or nitroso groups having nitrogen atoms of urea groups bound to carbon atoms of six-membered aromatic rings of a carbon skeleton being further substituted by nitrogen atoms not being part of nitro or nitroso groups
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D251/00Heterocyclic compounds containing 1,3,5-triazine rings
    • C07D251/02Heterocyclic compounds containing 1,3,5-triazine rings not condensed with other rings
    • C07D251/12Heterocyclic compounds containing 1,3,5-triazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members
    • C07D251/26Heterocyclic compounds containing 1,3,5-triazine rings not condensed with other rings having three double bonds between ring members or between ring members and non-ring members with only hetero atoms directly attached to ring carbon atoms
    • C07D251/40Nitrogen atoms
    • C07D251/48Two nitrogen atoms
    • C07D251/52Two nitrogen atoms with an oxygen or sulfur atom attached to the third ring carbon atom
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D285/00Heterocyclic compounds containing rings having nitrogen and sulfur atoms as the only ring hetero atoms, not provided for by groups C07D275/00 - C07D283/00
    • C07D285/01Five-membered rings
    • C07D285/02Thiadiazoles; Hydrogenated thiadiazoles
    • C07D285/04Thiadiazoles; Hydrogenated thiadiazoles not condensed with other rings
    • C07D285/081,2,4-Thiadiazoles; Hydrogenated 1,2,4-thiadiazoles
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D295/00Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms
    • C07D295/04Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms with substituted hydrocarbon radicals attached to ring nitrogen atoms
    • C07D295/12Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms with substituted hydrocarbon radicals attached to ring nitrogen atoms substituted by singly or doubly bound nitrogen atoms
    • C07D295/125Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms with substituted hydrocarbon radicals attached to ring nitrogen atoms substituted by singly or doubly bound nitrogen atoms with the ring nitrogen atoms and the substituent nitrogen atoms attached to the same carbon chain, which is not interrupted by carbocyclic rings
    • C07D295/13Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms with substituted hydrocarbon radicals attached to ring nitrogen atoms substituted by singly or doubly bound nitrogen atoms with the ring nitrogen atoms and the substituent nitrogen atoms attached to the same carbon chain, which is not interrupted by carbocyclic rings to an acyclic saturated chain
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D295/00Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms
    • C07D295/22Heterocyclic compounds containing polymethylene-imine rings with at least five ring members, 3-azabicyclo [3.2.2] nonane, piperazine, morpholine or thiomorpholine rings, having only hydrogen atoms directly attached to the ring carbon atoms with hetero atoms directly attached to ring nitrogen atoms
    • C07D295/26Sulfur atoms
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D471/00Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00
    • C07D471/02Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, at least one ring being a six-membered ring with one nitrogen atom, not provided for by groups C07D451/00 - C07D463/00 in which the condensed system contains two hetero rings
    • C07D471/08Bridged systems
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D495/00Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms
    • C07D495/02Heterocyclic compounds containing in the condensed system at least one hetero ring having sulfur atoms as the only ring hetero atoms in which the condensed system contains two hetero rings
    • C07D495/04Ortho-condensed systems

Definitions

  • This invention relates to phenyl urea and phenyl thiourea compounds, in particular to such compounds in the treatment of neurodegenerative diseases, in particular Alzheimer's disease.
  • AD Alzheimer's disease
  • a characteristic of this disease is the presence of extracellular senile plaque, the major component of which is the ⁇ -amyloid peptide (A ⁇ ) .
  • a ⁇ amyloid precursor protein
  • APP amyloid precursor protein
  • HTS assays are generally faced with the problem that selection signals are often caused by compounds that interfere with cellular processes or pathways that are redundant with that of the target. For example, some compounds found by mammalian cell based assays impair the production of A ⁇ through the increase of the pH in intracellular compartments, or they function through protein phosphorylation, or they simply catalyze polymerization of A ⁇ , thus reducing the percentage of soluble peptide.
  • Phenylurea type compounds are indicated as inhibitors of cyclin-dependent kinase 5/p25 and as a potential treatment of Alzheimer's disease (see Helal CJ. et al., "Discovery and SAR of 2-aminothiazole inhibitors of cyclin-dependent kinase 5/p25 as a potential treatment for Alzheimer' ' s disease", Bioorganic & Medical Chemistry Letters 14 (2004) 5521-5525).
  • R is independently from each other selected from H, C ] _-Cg-alkyl, C ⁇ -Cg-alkoxy, halo-C]_-Cg-alkyl, e.g. CF3, C ⁇ -Cg-alkylcarbonyl ⁇ halogen, cyano or an -NR2R3 group, especially R is independently from each other selected from H, C ⁇ -Cg-alkyl, C ⁇ -Cg-alkoxy, halo-C]_-Cg- alkyl, e.g. CF3, C]_-Cg-alkylcarbonyl, halogen, or cyano,
  • R ] _ is optionally substituted linear or branched C ⁇ -C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
  • R2 and R3 are independently from each other H, linear or branched Cl-C6-alkyl, in particular linear or branched Cl-C4-alkyl, or R2 and R3 form together with the nitrogen to which they are bound an aliphatic or aromatic 5- or 6-membered one or more heteroatoms comprising heterocycle, e.g. a piperidino, a piperazino or a morpholino group, and n independently from each other is 0, 1 or 2.
  • R is independently from each other selected from H, C]_-C4-alkyl, C ⁇ -C4-alkoxy, halo-C ] _-C4-alkyl, C]_- C4 ⁇ alkylcarbonyl, halogen, and cyano.
  • R is independently from each H, an alkyl, an alkoxy, a haloalkyl, an alkylcarbonyl, or a halogen as defined above.
  • R ] _ is optionally substituted linear or branched C ] _-C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
  • R 2 C ⁇ -Cg-alkyl
  • R3 C ⁇ -Cg-alkyl
  • R2 and R3 form together with the nitrogen to which they are bound a 5-membered or a 6-membered aliphatic or aromatic ring
  • n 0, 1 or 2, preferably 0.
  • R ] _ is optionally substituted linear or branched C ⁇ - ⁇ -alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
  • R 2 C]_-C4-alkyl
  • R2 and R3 form together with the nitrogen to which they are bound a heterocycle selected from
  • R]_ is CH 2 CH 2 CH 3 , (CH 2 ) 3-OCH3, (CH 2 ) 2-OCH3, (CH 2 ) 3-OCH2CH3, CH 2 CH 2 -C 6 C 5 , p-F-benzyl, CH(CH 3 )CgH 5 , or
  • R]_ is optionally substituted linear C]_-C4 ⁇ alkyls .
  • R]_ is optionally substituted linear C]_-C4 ⁇ alkyls .
  • R is independently selected from H, CH3, CH 2 CH3, OCH3, COCH3, Cl, Br, CF3, CN, more preferred selected from H, CH3, CH 2 CH 3 , OCH3, Cl, Br, CF 3 , CN.
  • R is independently selected from H, CH 3 , CH 2 CH 3 , OCH 3 , COCH 3 , Cl, Br, CF 3 ⁇ more preferred selected from H, CH 3 , CH 2 CH 3 , OCH 3 , Cl, Br,
  • the compound is a compound of formula (II)
  • Rg H or halogen
  • R7 H, C]_-C4-alkyl, C ] _-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C ⁇ -C4-alkyl, cyano or halogen,
  • Rg H, C]_-C4-alkyl, cyano or halogen
  • R9 H, C ] _-C4-alkyl, C ] _-C4-alkoxy or halo- C ⁇ -C4-alkyl,
  • R]_0 H or halogen
  • R]_, R2r ⁇ 3 an d Y are as defined above.
  • Rg H or halogen
  • R7 H, C ] _-C4-alkyl, C ] _-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C ] _-C4-alkyl or halogen,
  • Rg H, C]_-C4-alkyl or halogen
  • R ⁇ O H or halogen
  • R ⁇ , R 2 , R 3 and Y are as defined above.
  • Rg H or Br
  • R7 H, Cl, CH3, OCH3, CO-CH3, CF 3 , CN
  • Rg H, CH2CH3, CH 3 , Cl, CN
  • Rg H, CH 3 , OCH 3 , CF3, and
  • R 10 H, Br.
  • Rg H or Br
  • R 7 H, Cl, CH 3 , OCH 3 , CO-CH 3 , CF 3 ,
  • R 8 H, CH 2 CH 3 , CH 3 , Cl,
  • R 10 H, Br.
  • R]_ is optionally substituted linear or branched C]_-C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, Ci-C/p alkoxy, morpholinyl
  • R 2 C]_-C4-alkyl
  • a more preferred Ri is CH 2 CH 2 CH 3 , (CH 2 ) 3- OCH 3 , (CH 2 ) 2 -OCH 3 , (CH 2 J 3 -OCH 2 CH 3 , CH 2 CH 2 -CgC 5 , p-F- benzyl, CH(CH 3 )CgHs, or
  • R and Y are as defined above, but preferably R is independently from each other selected from H, CH3, CF3, OCH3, Cl, CO-CH3, and preferably Y is 0,
  • R4 is linear or branched C ⁇ -Cg-alkyl, in particular C ] _-C4-alkyl
  • R5 is independently from each other selected from C ] _-Cg-alkylthio, aryl-C ] _-Cg-alkylthio, aryloxy-C ⁇ - Cg-alkyl, arylthio-C;j_-Cg-alkyl, alkyloxy-C]_-Cg-alkyl, alkylthio-C]_-Cg-alkyl, C]_-Cg-alkyloxy, aryl-C ⁇ -Cg- alkyloxy and optionally substituted linear or branched C ] _-Cg-alkyl,
  • n independently from each other is 0, 1 or 2, with the proviso that only one D can be 0 or S, in particular S, and at most two adjacent D can be other than C-R5, and with the proviso that in the case that n is 0 and
  • R5 is substituted linear or branched C] 1 -Cg- alkyl, preferably linear or branched C]_-C4-alkyl, with the substituent being selected from O-R]_3 or S-R ⁇ 3 or N- R13R13 'with R]_3 and R13' being independently selected from the group consisting of unsubstituted or substituted 5- or ⁇ -membered aryl, unsubstituted or substituted 5- or 6-membered heteroaryl, with the substituents of the aryl or heteroaryl group being as defined for R, linear or branched C ⁇ -Cg-alkyl and C5 ⁇ Cg-cycloalkyl, in particular from the group consisting of O-R13 or S-R13 with R]_3 being selected from the group consisting of 5- or 6- membered aryl, and linear or branched C]_-C4 ⁇ alkyl .
  • R5 is independently from each other selected from C ] _-C4 ⁇ alkylthio, aryl-C ] _-C4-alkylthio, aryloxy-C]_- C4-alkyl, arylthio-C;j_-C4-alkyl, alkyloxy-C]_-C4-alkyl, alkylthio-C2_-C4-alkyl, C ] _-C4 ⁇ alkyloxy, aryl-C ] _-C4 ⁇ alkyloxy and optionally substituted linear or branched C ⁇ -C4 ⁇ alkyl, preferably substituted linear or branched C ] _-C4-alkyl, with the substituent being selected from O-R13 or S-R]_3 with R]_3 being selected from the group consisting of 5- or ⁇ -membered aryl, 5- or ⁇ -membered heteroaryl, linear or branched C ⁇ -C ⁇ -
  • R is independently from each other selected from H, CH3, CF3, OCH3, Cl, CO- CH3, Y is 0, D is S or N or NR4 or CR5, wherein R4 and R5 and the other groups are as defined above.
  • E]_ NR4 or S or O, in particular NR4 or S, wherein
  • R5 is C]_-C4-alkylthio, aryl-C ] _-C4-alkylthio, aryloxy-C2_-C4-alkyl,
  • E3 E2 with the proviso that if E2 is CR5, E3 is N and if E2 is N, E3 is CR5, and n is as defined above.
  • R4 linear or branched C]_-C4-alkyl, in particular CH3 or -CH (0113)2
  • R5 aryloxy-C ] _-C4 alkyl, in particular phenoxy-C ] _-C4 alkyl, especially 1-phenoxy-ethyl, or
  • R 5 Ci-C4-alkylthio.
  • the compound is a compound of formula (IV)
  • R5 H or halogen
  • R7 H, C]_-C4-alkyl, C]_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C ⁇ -C4-alkyl or halogen,
  • Rg H, C]_-C4 ⁇ alkyl or halogen
  • R9 H, C ⁇ -C4-alkyl, C;]_-C4-alkoxy or halo- C]_-C4-alkyl,
  • R ⁇ o H or halogen
  • Y, U and D are as defined above.
  • Rg H or Br
  • R7 H, Cl, CH3, OCH3, CO-CH 3 , CF3 r
  • Rg H, CH2CH3, CH 3 , Cl,
  • R 9 H, CH 3 , OCH 3 , CF 3 , and
  • R 10 H, Br.
  • R 7 H, CH3, OCH3, CO-CH 3 , CF 3 ,
  • R 8 H, Cl,
  • R 9 H, CH 3 , OCH 3 , CF 3 , and
  • n is 0 and
  • R4 is CH 3 , CH (CH 3 ) 2, and R]_ ⁇ is CH 3 , CH 2 CH 3 , CH 2 -C 6 H 5 ,
  • Rj_ 2 is CH 3 or CH2CH3, in particular
  • the ⁇ -secretase inhibitor is a compound of formula (V)
  • heterocycle is op- tionally substituted, in particular by one or two C1-C4- alkyl groups or such that a bicycle is formed, and n independently from each other is 0, 1 or 2, Bl, B3, B5 are independently selected from N or C-R' ,
  • B2 and B4 are independently selected from C-
  • R' is independently from each other selected from the group comprising hydrogen, halogen, in particular F, a C ] _-Cg-alkyl group, in particular a C]_-C4 ⁇ alkyl group, an -NR2R3 group wherein R2 and R3 are independently from each other H, linear or branched Cl- C6-alkyl, in particular linear or branched Cl-C4-alkyl, or R2 and R3 form together with the nitrogen to which they are bound an aliphatic or aromatic 5- or 6-membered one or more heteroatoms comprising heterocycle, e.g. a piperidino, a piperazino or a morpholino group, an amido group, an ester group, a
  • R' is independently from each other selected from the group comprising hydrogen, halogen, in particular F, a C ] _-Cg-alkyl group, in particular a C]_-C4 ⁇ alkyl group, an amido group, an ester group, a group
  • n independently from each other is 0, 1 or 2
  • R7 is selected from H, CH3, 00.3, COCH3
  • Bl is selected from
  • B3 is selected from N, CF, C-SO 2 -N
  • B4 is selected from CH, C-N(CHs) 2 , C-NHC (CH 3 ) 3 B5 is selected from N or CH, or B4 and B5 are both CR ⁇ wherein said two R' form together a group of type
  • n is selected from -(CH2)2NH-
  • ⁇ -secretase activity or ⁇ -secretase inhibition, respectively, as used in the context of the present invention can be determined by means of A ⁇ l-40 (Sw) bioassay and/or SEAP bioassay and/or FRET assay.
  • the A ⁇ l-40 (Sw) bioassay measures the amount of the amyoid peptide A ⁇ l-40 in the supernatant of Swedish APP695 transgenic HEK293 cells in the presence (or absence) of the various BACE inhibitors via ELISA (enzyme-linked immunosorbent assay) .
  • the SEAP bioassay measures the amount of the secreted reporter enzyme SEAP (secreted alkaline phosphatase) in the supernatant of transiently transfected HEK293 cells. In these cells, a SEAP-
  • APP (Sw) 695 fusion protein is transiently expressed in the presence (or absence) of the various BACE inhibitors. Secretion of the SEAP moiety upon cleavage at the APP ⁇ - site is quantitated via a luminescence readout.
  • the FRET assay measures the activity of recombinant BACE enzyme in the presence (or absence) of BACE inhibitors via a FRET (fluorescence resonance energy transfer) -based readout.
  • a ⁇ -secretase inhibitor of the present invention in general shows an inhibitory effect in at least one of the above mentioned tests, preferably in at least two of said tests, much preferred in all of said tests .
  • the compounds of the present invention can be administered for prophylactic and/or therapeutic treatment of diseases related to the deposition of amyloid ⁇ -protein, such as Alzheimer's disease, Down's syndrome, and advanced aging of the brain.
  • diseases related to the deposition of amyloid ⁇ -protein such as Alzheimer's disease, Down's syndrome, and advanced aging of the brain.
  • the compounds are administered to a host already suffering from the disease.
  • the compounds will be administered in an amount sufficient to inhibit further deposition of plaques .
  • the specific dose of compound (s) administered according to this invention to obtain therapeutic and/or prophylactic effects will, of course, be determined by the particular circumstances, such as the specific compound administered, the condition being treated, etc.
  • a daily dose will contain a dosage level of from about 0.01 mg/kg to about 50 mg/kg of body weight of an active compound, preferably from about 0.05 mg/kg to about 20 mg/kg, for example from about 0.1 mg/kg to about 120 mg/kg.
  • the compound can be administered by a variety of routes including oral, rectal, transdermal, subcutaneous, intravenous, intramuscular and intranasal either as such, but preferable in a formulation comprising carriers adjuvants etc.
  • Suitable pharmaceutically acceptable solid and liquid carriers and/or pharmaceutically acceptable adjuvants, such as stabilizing agents, emulsifyers, etc. are known in the art.
  • a typical pharmaceutical composition for intramuscular injection would contain about one ⁇ g to one mg of the compound in from one to four milliliters of sterile buffered water.
  • the typical pharmaceutical composition for intravenous infusion would contain about one to one hundred milligrams of the compound in from one hundred to five hundred milliliters of sterile Ringer's solution.
  • the pharmaceutical formulations are prepared by known procedures using known and readily available ingredients .
  • Figure 2 shows the structure formulas of compounds A15 to A60 of Table 5.
  • Figure 3 shows the structure formulas of compounds Bl to B4 of Tables 2 and 6
  • Figure 4 shows the structure formula of compounds Cl to C ⁇ of Tables 3 and 7.
  • Tables 1 to 3 make a relation between compound designation and structure.
  • the tests performed were a) A ⁇ l-40 (Sw) bioassay, which measures the 0 amount of the amyoid peptide A ⁇ l-40 in the supernatant of Swedish APP695 transgenic HEK293 cells in the presence of the various BACE inhibitors via ELISA (enzyme-linked immunosorbent assay) .
  • the inhibitory concentration that reduces A ⁇ l-40 secretion to 50 % is indicated (IC50) , or the % reduction of A ⁇ l-40 secretion at the indicated concentration.
  • SEAP bioassay which measures the amount of the secreted reporter enzyme SEAP (secreted alkaline phosphatase) in the supernatant of transiently transfected HEK293 cells.
  • a SEAP-APP (Sw) 695 fusion protein is transiently expressed in HEK293 cells in the presence of the various BACE inhibitors. Secretion of the SEAP moiety upon cleavage at the APP ⁇ -site is quantitated via a luminescence readout.
  • the inhibitory concentration that reduces secreted SEAP activity to 50 % is indicated (IC50) , or the % reduction of secreted SEAP activity at the indicated concentration.
  • FRET assay which measures the activity of recombinant BACE enzyme in the presence of the various BACE inhibitors via a FRET (fluorescence resonance energy transfer) -based readout.

Abstract

It has been found that phenylurea compounds, in particular diphenylurea compounds of the formula (I), and pharmaceutically acceptable salts thereof are medicaments for the treatment of neurodegenerative diseases, in particular diseases involved with β-secretase such as Alzheimer's disease.

Description

Aryl urea compounds as β-secretase inhibitors
Cross References to Related Applications This, application claims the priority of European patent application no. 05012616.8, filed June 13, 2005 and of US provisional application no. 60/690,415, filed June 14, 2005, the disclosure of which is incorporated herein by reference in its entirety.
Technical Field
This invention relates to phenyl urea and phenyl thiourea compounds, in particular to such compounds in the treatment of neurodegenerative diseases, in particular Alzheimer's disease.
Background Art
Alzheimer's disease (AD) is the most common form of dementia among older people, and affects parts of the brain that control thought, memory and language. Susceptibility to Alzheimer's disease increases with age, but Alzheimer's disease is not a normal part of the ageing process. A characteristic of this disease is the presence of extracellular senile plaque, the major component of which is the β-amyloid peptide (Aβ) . The hydrophobic, 39-43-amino-acid-long Aβ peptide is excised from the amyloid precursor protein (APP) by sequential cleavage by the so-called β- and γ-secretases .
Known genetic predispositions for AD mostly affect genes involved in Aβ generation or Aβ deposition. Since the Aβ peptide seems to play an important role in the pathogenesis of AD, current therapeutic strategies often focus on inhibition of Aβ deposition and generation. Inhibition of β-secretase activity represents an attractive option to achieve this goal. Despite major efforts to identify novel β- secretase inhibitors by applying in vitro high-throughput screening (HTS) assays with purified soluble BACE-I fragments and fluorogenic peptide substrates, the best progress towards efficient BACE-I inhibition has been achieved so far by the use of peptidic transition-state mimetic compounds. However, for efficient inhibition of β-secretase in cells, their molecular weight must be reduced and their structure modified so as to allow for permeation of cellular membranes, the blood-brain barrier and for activity in the natural cellular environment.
There also exist some assays for identifying low molecular weight inhibitors of secretases that can block these membrane-bound enzymes at the natural location within intracellular compartments. Cell-based
HTS assays, however, are generally faced with the problem that selection signals are often caused by compounds that interfere with cellular processes or pathways that are redundant with that of the target. For example, some compounds found by mammalian cell based assays impair the production of Aβ through the increase of the pH in intracellular compartments, or they function through protein phosphorylation, or they simply catalyze polymerization of Aβ, thus reducing the percentage of soluble peptide.
A method for the identification of modulators of a secretase activity is described in WO 03/087842 Al.
Some candidate compounds for inhibiting the production of Aβ peptide in a biological system have been proposed in US 5,814,646 and US 5,624,937. A review is found in Gumming J.N. et al . , "Design and development of BACE-I inhibitors", Current Opinion in Drug Discovery and Development 2004, 7 (4 ): 536-556.
Phenylurea type compounds are indicated as inhibitors of cyclin-dependent kinase 5/p25 and as a potential treatment of Alzheimer's disease (see Helal CJ. et al., "Discovery and SAR of 2-aminothiazole inhibitors of cyclin-dependent kinase 5/p25 as a potential treatment for Alzheimer'' s disease", Bioorganic & Medical Chemistry Letters 14 (2004) 5521-5525).
Several diphenylurea and phenylurea type compounds have been described in literature (see e.g. Database Chemcats, Chemical Abstracts Service Columbus , Ohio, USA) .
Nevertheless, there is still a need for potent β-secretase inhibitors that directly inhibit β- secretase .
Disclosure of the Invention
Hence, it is a general object of the invention to provide compounds that directly act as β- secretase inhibitors .
Now, in order to implement these and still further objects of the invention, which will become more readily apparent as the description proceeds, the urea compounds for use in the present invention that have been found to be β-secretase inhibitors are manifested by the following formula I
Figure imgf000004_0001
(I) wherein
R is independently from each other selected from H, C]_-Cg-alkyl, Cχ-Cg-alkoxy, halo-C]_-Cg-alkyl, e.g. CF3, Cχ-Cg-alkylcarbonylΛ halogen, cyano or an -NR2R3 group, especially R is independently from each other selected from H, C^-Cg-alkyl, C^-Cg-alkoxy, halo-C]_-Cg- alkyl, e.g. CF3, C]_-Cg-alkylcarbonyl, halogen, or cyano,
Y = 0 or S, preferably 0, R]_ is optionally substituted linear or branched C^-C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
R2 and R3 are independently from each other H, linear or branched Cl-C6-alkyl, in particular linear or branched Cl-C4-alkyl, or R2 and R3 form together with the nitrogen to which they are bound an aliphatic or aromatic 5- or 6-membered one or more heteroatoms comprising heterocycle, e.g. a piperidino, a piperazino or a morpholino group, and n independently from each other is 0, 1 or 2. In presently slightly preferred inhibitors R is independently from each other selected from H, C]_-C4-alkyl, Cχ-C4-alkoxy, halo-C]_-C4-alkyl, C]_- C4~alkylcarbonyl, halogen, and cyano.
Alternatively, R is independently from each H, an alkyl, an alkoxy, a haloalkyl, an alkylcarbonyl, or a halogen as defined above.
In a preferred embodiment, R]_ is optionally substituted linear or branched C]_-C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
R2 = Cχ-Cg-alkyl, R3 = Cχ-Cg-alkyl, or R2 and R3 form together with the nitrogen to which they are bound a 5-membered or a 6-membered aliphatic or aromatic ring, and n = 0, 1 or 2, preferably 0.
In a more preferred embodiment
R]_ is optionally substituted linear or branched C^-^-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
R2 = C]_-C4-alkyl, and
R3 = C]_-C4~alkyl, and n = 0 or 1, especially 0.
In an also preferred embodiment R2 and R3 form together with the nitrogen to which they are bound a heterocycle selected from
Figure imgf000006_0001
In especially preferred embodiments, R]_ is CH2CH2CH3, (CH2) 3-OCH3, (CH2) 2-OCH3, (CH2 ) 3-OCH2CH3, CH2CH2-C6C5, p-F-benzyl, CH(CH3)CgH5, or
Figure imgf000006_0002
In general R]_ is optionally substituted linear C]_-C4~alkyls . In a preferred embodiment
R is independently selected from H, CH3, CH2CH3, OCH3, COCH3, Cl, Br, CF3, CN, more preferred selected from H, CH3, CH2CH3, OCH3, Cl, Br, CF3, CN.
Alternatively, R is independently selected from H, CH3, CH2CH3, OCH3, COCH3, Cl, Br, CF3^ more preferred selected from H, CH3, CH2CH3, OCH3, Cl, Br,
CF3. In an also preferred embodiment
Rl = C3-alkyl, C]_~C4-alkoxy-C2-C3-alkyl, an optionally p-fluoro substituted phenyl-C;i_-C4-alkyl, and/or R2 = R3 = CH3
In another preferred embodiment, the compound is a compound of formula (II)
Figure imgf000007_0001
wherein
Rg = H or halogen,
R7 = H, C]_-C4-alkyl, C]_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-Cχ-C4-alkyl, cyano or halogen,
Rg = H, C]_-C4-alkyl, cyano or halogen,
R9 = H, C]_-C4-alkyl, C]_-C4-alkoxy or halo- Cχ-C4-alkyl,
R]_0 = H or halogen, and
R]_, R2r ^3 and Y are as defined above.
In an alternative embodiment,
Rg = H or halogen,
R7 = H, C]_-C4-alkyl, C]_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C]_-C4-alkyl or halogen,
Rg = H, C]_-C4-alkyl or halogen,
Rg == H, C]_-C4~alkyl, Cχ-C4-alkoxy or halo- C]_-C4-alkyl,
R^O = H or halogen, and R^, R2, R3 and Y are as defined above.
In more preferred compounds of formula (II)
Rg = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CF3, CN
Rg = H, CH2CH3, CH3, Cl, CN
Rg = H, CH3, OCH3, CF3, and
R10 = H, Br.
In an alternative embodiment,
Rg = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CF3,
R8 = H, CH2CH3, CH3, Cl,
Rg - H, CH3, OCH3, CF3, and
R10 = H, Br.
Especially preferred compounds of formula (I) or formula (II) are those wherein
R]_ is optionally substituted linear or branched C]_-C4-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, Ci-C/p alkoxy, morpholinyl
R2 = C]_-C4-alkyl
R3 = Cχ-C4~alkyl, and n = 0 or 1.
Much preferred, R2 and R3 both are methyl, and also much preferred n=0.
A more preferred Ri is CH2CH2CH3, (CH2) 3- OCH3, (CH2) 2-OCH3, (CH2J3-OCH2CH3, CH2CH2-CgC5, p-F- benzyl, CH(CH3)CgHs, or
Figure imgf000008_0001
All substituents disclosed as being preferred, more preferred, most preferred with regard to formula (I) are also preferred substituents with regard to formula (II) . In a further embodiment of the present invention the β-secretase inhibitors have the following formula (III)
Figure imgf000009_0001
wherein
R and Y are as defined above, but preferably R is independently from each other selected from H, CH3, CF3, OCH3, Cl, CO-CH3, and preferably Y is 0,
D = 0 or S or N or NR4 or CR5, in particular S or N or NR4 or CR5, wherein
R4 is linear or branched Cχ-Cg-alkyl, in particular C]_-C4-alkyl
R5 is independently from each other selected from C]_-Cg-alkylthio, aryl-C]_-Cg-alkylthio, aryloxy-C^- Cg-alkyl, arylthio-C;j_-Cg-alkyl, alkyloxy-C]_-Cg-alkyl, alkylthio-C]_-Cg-alkyl, C]_-Cg-alkyloxy, aryl-C^-Cg- alkyloxy and optionally substituted linear or branched C]_-Cg-alkyl,
U = -CH2-, C=O, - (CH2) nS-, - (CH2) nO-, -(CH2)nNH-, or
-(CH2)ET I- (CH2) n-, wherein the heterocycle is op-
tionally substituted, in particular by one or two C]_-C4- alkyl groups or such that a bicycle is formed, and n independently from each other is 0, 1 or 2, with the proviso that only one D can be 0 or S, in particular S, and at most two adjacent D can be other than C-R5, and with the proviso that in the case that n is 0 and
Figure imgf000010_0001
R5 is substituted linear or branched C]1-Cg- alkyl, preferably linear or branched C]_-C4-alkyl, with the substituent being selected from O-R]_3 or S-R^3 or N- R13R13 'with R]_3 and R13' being independently selected from the group consisting of unsubstituted or substituted 5- or β-membered aryl, unsubstituted or substituted 5- or 6-membered heteroaryl, with the substituents of the aryl or heteroaryl group being as defined for R, linear or branched C^-Cg-alkyl and C5~Cg-cycloalkyl, in particular from the group consisting of O-R13 or S-R13 with R]_3 being selected from the group consisting of 5- or 6- membered aryl, and linear or branched C]_-C4~alkyl . In a slightly preferred embodiment R5 is independently from each other selected from C]_-C4~alkylthio, aryl-C]_-C4-alkylthio, aryloxy-C]_- C4-alkyl, arylthio-C;j_-C4-alkyl, alkyloxy-C]_-C4-alkyl, alkylthio-C2_-C4-alkyl, C]_-C4~alkyloxy, aryl-C]_-C4~ alkyloxy and optionally substituted linear or branched Cχ-C4~alkyl, preferably substituted linear or branched C]_-C4-alkyl, with the substituent being selected from O-R13 or S-R]_3 with R]_3 being selected from the group consisting of 5- or β-membered aryl, 5- or β-membered heteroaryl, linear or branched C^-C^-alkyl and C5-C5- cycloalkyl .
In a preferred embodiment R is independently from each other selected from H, CH3, CF3, OCH3, Cl, CO- CH3, Y is 0, D is S or N or NR4 or CR5, wherein R4 and R5 and the other groups are as defined above.
In another preferred embodiment
Figure imgf000011_0001
wherein
E]_ = NR4 or S or O, in particular NR4 or S, wherein
R4 is linear or branched C]_-C4-alkyl, E2 = CR5 or N, wherein
R5 is C]_-C4-alkylthio, aryl-C]_-C4-alkylthio, aryloxy-C2_-C4-alkyl,
E3 = E2 with the proviso that if E2 is CR5, E3 is N and if E2 is N, E3 is CR5, and n is as defined above.
In a preferred embodiment
-
Figure imgf000011_0002
I S
Figure imgf000012_0001
wherein R4 = linear or branched C]_-C4-alkyl, in particular CH3 or -CH (0113)2
R5 = C]_-C4-alkylthio, and n = 1 or 2,
or
Figure imgf000012_0002
wherein n = 0,
R5 = aryloxy-C]_-C4 alkyl, in particular phenoxy-C]_-C4 alkyl, especially 1-phenoxy-ethyl, or
Figure imgf000012_0003
wherein n = 0 ,
R5 = Ci-C4-alkylthio.
In a preferred embodiment, the compound is a compound of formula (IV)
Figure imgf000013_0001
wherein R5 = H or halogen,
R7 = H, C]_-C4-alkyl, C]_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-Cχ-C4-alkyl or halogen,
Rg = H, C]_-C4~alkyl or halogen,
R9 = H, Cχ-C4-alkyl, C;]_-C4-alkoxy or halo- C]_-C4-alkyl,
R^o = H or halogen, and
Y, U and D are as defined above.
In more preferred compounds of formula (IV)
Rg = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CF3r
Rg = H, CH2CH3, CH3, Cl,
R9 = H, CH3, OCH3, CF3, and
R10 = H, Br.
In even more preferred compounds of formula
(IV) R6 = H,
R7 = H, CH3, OCH3, CO-CH3, CF3,
R8 = H, Cl,
R9 = H, CH3, OCH3, CF3, and
R10 = H.
In preferred embodiments of formula (III) and especially formula (IV) , n is 0 and
Figure imgf000014_0001
xs
I
Figure imgf000014_0002
wherein R4 is CH3, CH (CH3) 2, and R]_χ is CH3, CH2CH3, CH2-C6H5,
Figure imgf000014_0003
wherein Rj_2 is CH3 or CH2CH3, in particular
CH2CH3
or
Figure imgf000015_0001
wherein R5 is - (CH2) m(CR]_3) (OAr), wherein R]_3 is H, C]_-C4~alkyl, in particular methyl, Ar is phenyl or heteroaryl, in particular phenyl, and m = 0, 1 or 2.
In another embodiment of the present invention the β-secretase inhibitor is a compound of formula (V)
Figure imgf000015_0002
wherein R is as defined above, U = -CH2-, C=O, - (CH2) nS-, -(CH2)HO-, - (CH2) nNH-, or
-(CH2)IT J- (CH2) n-, wherein the heterocycle is op- tionally substituted, in particular by one or two C1-C4- alkyl groups or such that a bicycle is formed, and n independently from each other is 0, 1 or 2, Bl, B3, B5 are independently selected from N or C-R' ,
B2 and B4 are independently selected from C-
R' , and
R' is independently from each other selected from the group comprising hydrogen, halogen, in particular F, a C]_-Cg-alkyl group, in particular a C]_-C4~ alkyl group, an -NR2R3 group wherein R2 and R3 are independently from each other H, linear or branched Cl- C6-alkyl, in particular linear or branched Cl-C4-alkyl, or R2 and R3 form together with the nitrogen to which they are bound an aliphatic or aromatic 5- or 6-membered one or more heteroatoms comprising heterocycle, e.g. a piperidino, a piperazino or a morpholino group, an amido group, an ester group, a
group
Figure imgf000016_0001
or two adjacent R' form a group
Figure imgf000016_0002
and n independently from each other is 0, 1 or 2. In a preferred embodiment R' is independently from each other selected from the group comprising hydrogen, halogen, in particular F, a C]_-Cg-alkyl group, in particular a C]_-C4~alkyl group, an amido group, an ester group, a group
Figure imgf000017_0001
or two adjacent R' form a group
Figure imgf000017_0002
and n independently from each other is 0, 1 or 2
Preferably, a compound of formula (VI]
Figure imgf000017_0003
wherein
R7 is selected from H, CH3, 00.3, COCH3
Bl is selected from
B2 is selected from
Figure imgf000017_0004
B3 is selected from N, CF, C-SO2-N
B4 is selected from CH, C-N(CHs)2, C-NHC (CH3) 3 B5 is selected from N or CH, or B4 and B5 are both CRΛ wherein said two R' form together a group of type
Figure imgf000018_0001
and [U]n is selected from -(CH2)2NH-
Figure imgf000018_0002
The compounds disclosed above are either commercially available or can be produced according to well known methods (see e.g. US 5,814,646).
It has been found that compounds of the formulas indicated above and their pharmaceutically acceptable salts that are also included in the present invention are efficient in inhibiting β-secretase activity. Thus, such compounds and their pharmaceutically acceptable salts are suitable in the treatment and prophylaxis of neurodegenerative diseases, in particular diseases related to β-secretase activity such as
Alzheimer's disease, Down's syndrome, and advanced aging of brain. β-secretase activity or β-secretase inhibition, respectively, as used in the context of the present invention can be determined by means of Aβl-40 (Sw) bioassay and/or SEAP bioassay and/or FRET assay.
The Aβl-40 (Sw) bioassay measures the amount of the amyoid peptide Aβl-40 in the supernatant of Swedish APP695 transgenic HEK293 cells in the presence (or absence) of the various BACE inhibitors via ELISA (enzyme-linked immunosorbent assay) .
The SEAP bioassay measures the amount of the secreted reporter enzyme SEAP (secreted alkaline phosphatase) in the supernatant of transiently transfected HEK293 cells. In these cells, a SEAP-
APP (Sw) 695 fusion protein is transiently expressed in the presence (or absence) of the various BACE inhibitors. Secretion of the SEAP moiety upon cleavage at the APP β- site is quantitated via a luminescence readout.
The FRET assay measures the activity of recombinant BACE enzyme in the presence (or absence) of BACE inhibitors via a FRET (fluorescence resonance energy transfer) -based readout.
A β-secretase inhibitor of the present invention in general shows an inhibitory effect in at least one of the above mentioned tests, preferably in at least two of said tests, much preferred in all of said tests .
As already mentioned above, the compounds of the present invention can be administered for prophylactic and/or therapeutic treatment of diseases related to the deposition of amyloid β-protein, such as Alzheimer's disease, Down's syndrome, and advanced aging of the brain. In therapeutic applications, the compounds are administered to a host already suffering from the disease. The compounds will be administered in an amount sufficient to inhibit further deposition of plaques . The specific dose of compound (s) administered according to this invention to obtain therapeutic and/or prophylactic effects will, of course, be determined by the particular circumstances, such as the specific compound administered, the condition being treated, etc. A daily dose will contain a dosage level of from about 0.01 mg/kg to about 50 mg/kg of body weight of an active compound, preferably from about 0.05 mg/kg to about 20 mg/kg, for example from about 0.1 mg/kg to about 120 mg/kg. The compound can be administered by a variety of routes including oral, rectal, transdermal, subcutaneous, intravenous, intramuscular and intranasal either as such, but preferable in a formulation comprising carriers adjuvants etc. Suitable pharmaceutically acceptable solid and liquid carriers and/or pharmaceutically acceptable adjuvants, such as stabilizing agents, emulsifyers, etc. are known in the art.
For example, a typical pharmaceutical composition for intramuscular injection would contain about one μg to one mg of the compound in from one to four milliliters of sterile buffered water. The typical pharmaceutical composition for intravenous infusion would contain about one to one hundred milligrams of the compound in from one hundred to five hundred milliliters of sterile Ringer's solution.
The pharmaceutical formulations are prepared by known procedures using known and readily available ingredients .
It shall be understood that all above mentioned preferred and much preferred characteristics can independently be combined with each other.
Short Description of the Drawings Figure 1 shows the structure formulas of compounds Al to A14 of Tables 1 and 4
Figure 2 shows the structure formulas of compounds A15 to A60 of Table 5.
Figure 3 shows the structure formulas of compounds Bl to B4 of Tables 2 and 6
Figure 4 shows the structure formula of compounds Cl to Cβ of Tables 3 and 7.
Please note that "lacking" valences in the chemical structures signify the presence of a hydrogen.
Modes for Carrying Out the Invention Specific compounds and their β-secretase inhibiting effects are further described below.
Tables 1 to 3 make a relation between compound designation and structure.
Table 1:
Figure imgf000021_0001
Figure imgf000022_0001
Table 2:
Figure imgf000023_0001
5
Figure imgf000023_0002
Table 3
Figure imgf000024_0001
10
Figure imgf000024_0002
These compounds have been tested for their 5 performance as β-secretase inhibitors.
The results of three different tests performed are listed in Tables 4 to 6 below.
The tests performed were a) Aβl-40 (Sw) bioassay, which measures the 0 amount of the amyoid peptide Aβl-40 in the supernatant of Swedish APP695 transgenic HEK293 cells in the presence of the various BACE inhibitors via ELISA (enzyme-linked immunosorbent assay) . In the table, the inhibitory concentration that reduces Aβl-40 secretion to 50 % is indicated (IC50) , or the % reduction of Aβl-40 secretion at the indicated concentration. b) SEAP bioassay, which measures the amount of the secreted reporter enzyme SEAP (secreted alkaline phosphatase) in the supernatant of transiently transfected HEK293 cells. A SEAP-APP (Sw) 695 fusion protein is transiently expressed in HEK293 cells in the presence of the various BACE inhibitors. Secretion of the SEAP moiety upon cleavage at the APP β-site is quantitated via a luminescence readout. In the table, the inhibitory concentration that reduces secreted SEAP activity to 50 % is indicated (IC50) , or the % reduction of secreted SEAP activity at the indicated concentration. c) FRET assay, which measures the activity of recombinant BACE enzyme in the presence of the various BACE inhibitors via a FRET (fluorescence resonance energy transfer) -based readout. In the table, the inhibitory concentration that reduces the activity of BACE to 50 % is indicated (IC50), or the % reduction of the activity of BACE at the indicated concentration. d) An additional in silico test was performed for the compounds listed in Tables 1 to 3. The compounds were docked with the FFLD approach (Budin et al . , Biol. Chem. 382, 1365-1372, 2001) and their binding energy was evaluated with the LIECE method (Huang and Caflisch, J. Med. Chem. 47, 5791-5797, 2004) . The affinity evaluated with LIECE is in the low micromolar range for most of these compounds .
Table 4
Compo Aβl-40 (Sw) SEAP bioassay FRET assay LIECE und bioassay (cell-based) (in vitro) Ri [μM] (cell-based)
Al IC50 3.0 μM IC50 3.5 μM IC50 58 μM 8.11
A2 IC50 3.2 μM 27 (3 μM) IC50 284 μM 9.35
A3 IC50 2.6 μM 23 (3 μM) IC50 97 μM 9.81
A4 IC50 7.5 μM 21 (6 μM) 33 (100 μM) 10.26
A5 IC50 14. 3 μM 0 (6 μM) 16 (100 μM) 15.99
Aβ IC50 23 μM 19 (12.5 μM) 21 (100 μM) 17.56
A7 IC50 12. 9 μM 0 (12.5 μM) 0 (100 μM) 18.64
A8 IC50 5.6 μM 14 (3 μM) 35 (100 μM) 32.34
A9 IC50 5.9 μM 17 (3 μM) IC50 46 μM 32.56
AlO IC50 3.1 μM 10 (1.6 μM) IC50 64 μM 34.71
All IC50 5.2 μM 0 (6 μM) 20 (200 μM) 38.37
A12 IC50 4.2 μM 14 (1.6 μM) IC50 131 μM 39.41
A13 IC50 3.8 μM 25 (3 μM) 37 (100 μM) 50.09
Al4 IC50 7.8 μM 0 6 μM) 0 (100 μM) 66.41
Table 5:
Aβl-40 FRET
ComLIECE assay
STRUCTURE pound Ki (Sw)
No. [μM] bioassay IC50
[μM]
Figure imgf000027_0001
Figure imgf000028_0001
Figure imgf000029_0001
Figure imgf000030_0001
Figure imgf000031_0001
Figure imgf000032_0001
A49 131
Figure imgf000032_0002
Figure imgf000033_0001
Figure imgf000034_0001
Table 6:
Figure imgf000035_0001
Table 7
Figure imgf000035_0002
While there are shown and described presently preferred embodiments of the invention, it is to be distinctly understood that the invention is not limited thereto but may be otherwise variously embodied and prac- ticed within the scope of the following claims.

Claims

Claims
1. A β-secretase inhibitor of formula (I)
Figure imgf000036_0001
(I)
wherein
R is independently from each other selected from H, C]_-Cg-alkyl, Cχ-Cg-alkoxy, halo-C]_-Cg-alkyl, e.g. CF3, Ci-Cg-alkylcarbonyl, halogen, or cyano,
Y = 0 or S, preferably 0, Rl is optionally substituted linear or branched C^-C^-alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, or morpholinyl,
R2 and R3 are independently from each other H, linear or branched Cl-C6-alkyl, in particular linear or branched Cl-C4-alkyl, or R2 and R3 form together with the nitrogen to which they are bound an aliphatic or aromatic 5- or 6-membered one or more heteroatoms comprising heterocycle, e.g. a piperidino, a piperazino or a morpholino group, and n independently from each other is 0, 1 or 2, or pharmaceutically acceptable salts thereof for the treatment of neurodegenerative diseases .
2. The β-secretase inhibitor of claim 1, wherein R is independently from each other selected from H, Cχ-C4-alkyl, Ci-C^-alkoxy, halo-C]_-C4-alkyl, C1-C4- alkylcarbonyl, halogen, cyano, or pharmaceutically acceptable salts thereof.
3. The β-secretase inhibitor of claim 1 or 2, wherein R is selected from alkyl, alkoxy, haloalkyl, alkylcarbonyl, halogen, or pharmaceutically acceptable salts thereof.
4. The β-secretase inhibitor of anyone of the preceding claims having formula (II)
Figure imgf000037_0001
wherein
Rg = H or halogen,
R7 = H1. Ci-C4-alkyl, Ci-C4-alkoxyf C1-C4- alkylcarbonyl, halo-C2-C4-alkyl, cyano or halogen, Rβ = H, Ci-C4~alkyl, cyano or halogen, R9 = H, Cχ-C4-alkyl, C]_-C4-alkoxy or halo- C1-C4-alkyl,
R]_Q = H or halogen, and R1, R2r R3 and Y are as defined in anyone of the preceding claims, or pharmaceutically acceptable salts thereof.
5. The β-secretase inhibitor of claim 4 wherein Rg = H or halogen,
R7 = H, Ci-C^-alkyl, C-|_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C1-C4-alkyl or halogen, Rg = H, C]_-C4-alkyl or halogen, R9 = H, C]_-C4-alkyl, C1-C4~alkoxy or halo-
Cχ-C4-alkyl,
R1O = H or halogen or pharmaceutically acceptable salts thereof.
6. The β-secretase inhibitor of claim 4 wherein
Rg = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CF3, CN
R8 = H, CH2CH3, CH3, Cl, CN
R9 = H, CH3, OCH3, CF3, and
R10 = H, Br, or pharmaceutically acceptable salts thereof,
7. The β-secretase inhibitor of claim 6 wherein
Rg = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CF3^
R8 = H, CH2CH3, CH3, Cl,
R9 = H, CH3, OCH3, CF3, and
R10 = H, Br, or pharmaceutically acceptable salts thereof,
8. The β-secretase inhibitor of anyone of the preceding claims, wherein R1 is optionally substituted linear or branched C1-C4~alkyl, wherein the substituents are selected from optionally halogen substituted aryl, C1-C4- alkoxy, morpholinyl or pharmaceutically acceptable salts thereof.
9. The β-secretase inhibitor of anyone of the preceding claims, wherein
R2 = C!-C4-alkyl ^3 = C]_-C4-alkyl, and n = 0 or 1, or pharmaceutically acceptable salts thereof.
10. The β-secretase inhibitor of anyone of the preceding claims, wherein R2 and R3 together with the nitrogen to which they are bound form a heterocycle selected from
Figure imgf000039_0001
or pharmaceutically acceptable salts thereof.
11. The β-secretase inhibitor anyone of the preceding claims, wherein
Rl is CH2CH2CH3, (CH2) 3-OCH3, (CH2) 2-0CH3, (CH2J3-OCH2CH3, CH2CH2-CgCs, p-F-benzyl, CH(CH3)CgH5, or
Figure imgf000039_0002
or pharmaceutically acceptable salts thereof,
12. The β-secretase inhibitor anyone of the preceding claims, wherein R]_ is an optionally substituted linear C]_- C4~alkyl, or pharmaceutically acceptable salts thereof.
13. The β-secretase inhibitor of anyone of the preceding claims, wherein R2 and R3 both are methyl, or pharmaceutically acceptable salts thereof.
14. The β-secretase inhibitor of anyone of the preceding claims, wherein n=0, or pharmaceutically acceptable salts thereof.
15. A β-secretase inhibitor formula (Hi;
Figure imgf000040_0001
wherein
R and Y are as defined in anyone of the preceding claims,
D = O or S or N or NR4 or CR5, in particular S or N or NR4 or CR5, wherein
R4 is linear or branched C]_-Cg~alkyl, in particular C^-C^alkyl
R5 is independently from each other selected from C]_-Cg-alkylthio, aryl-Cχ-Cg-alkylthio, aryloxy-C]_- Cg-alkyl, arylthio-C^-Cg-alkyl, alkyloxy-C^-Cg-alkyl, alkylthio-Cχ-Cg-alkyl, C^-Cg-alkyloxy, aryl-C]_-Cg- alkyloxy and optionally substituted linear or branched Ci-Cg-alkyl,
U = -CH2-, C=O, -(CH2JnS-, - (CH2) nO-, -(CH2JnNH-, or - (CH2) n- I- (CH2) n-, wherein the heterocycle is op-
tionally substituted, in particular by one or two C1-C4- alkyl groups or such that a bicycle is formed, and n independently from each other is 0, 1 or 2, with the proviso that only one D can be O or S, in particular S, and at most two adjacent D can be other than C-R5, and with the proviso that in the case that n in [U]n is 0 and
Figure imgf000041_0001
R5 is substituted linear or branched C^-Cg- alkyl, preferably linear or branched C]_-C4~alkyl, with the substituent being selected from O-R13 or S-R]_3 or N- R13R13 'with R]_3 and R13 ' being independently selected from the group consisting of unsubstituted or substituted 5- or β-membered aryl, unsubstituted or substituted 5- or 6-membered heteroaryl, with the substituents of the aryl or heteroaryl group being as defined for R, linear or branched C^-Cg-alkyl and C5-Cg-cycloalkyl, in particular from the group consisting of O-R2.3 or S-R13 with R]_3 being selected from the group consisting of 5- or 6- membered aryl, and linear or branched C^-^-alkyl, or pharmaceutically acceptable salts thereof for the treatment of neurodegenerative diseases .
16. The β-secretase inhibitor of claim 15, wherein R is independently from each other selected from H, CH3, CF3, OCH3, Cl, CO-CH3, or pharmaceutically acceptable salts thereof.
17. The β-secretase inhibitor of claim 15 or 16, wherein
R5 is independently from each other selected from C]_-C4-alkylthio, aryl-C]_-C4-alkylthio, aryloxy~C]_- C4-alkyl, arylthio-C;i_-C4-alkyl, alkyloxy-C]_-C4-alkyl, alkylthio-C]_-C4-alkyl, C]_-C4-alkyloxy, aryl-C]_-C4- alkyloxy and optionally substituted linear or branched C]_-C4-alkyl, preferably substituted linear or branched C]_-C4-alkyl, with the substituent being selected from O-Rχ3 or S-R]_3 with R^3 being selected from the group consisting of 5- or 6-membered aryl, 5- or 6-membered heteroaryl, linear or branched C]_-C4-alkyl and C5~Cg- cycloalkyl, or pharmaceutically acceptable salts thereof.
18. The β-secretase inhibitor of anyone of claims 15 to 17, wherein
where
Figure imgf000042_0001
E]_ = NR4 or S or 0, in particular NR4 or S7 wherein
R4 is linear or branched C]_-C4-alkyl,
E2 = CR5 or N, wherein
R5 is Cχ-C4-alkylthio, aryl-C]_-C4-alkylthio, aryloxy-Ci-C4-alkyl,
E3 = E2 with the proviso that if E2 is CR5, E3 is N and if E2 is N, E3 is CR5, and n is 0 , 1 or 2 , or pharmaceutically acceptable salts thereof,
19. The β-secretase inhibitor of claim 18, wherein
Figure imgf000043_0001
is
Figure imgf000043_0002
wherein
R4 - linear or branched Ci-C-j-alkyl, in particular CH3 or -CH(CH3)2
R5 = C]_-C4-alkylthio, and n = 1 or 2,
or
Figure imgf000043_0003
wherein n = 0 ,
R5 = aryloxy-C]_-C4 alkyl, in particular phenoxy-C]_-C4 alkyl, especially 1-phenoxy-ethyl, or
Figure imgf000044_0001
wherein n = 0,
R5 = Ci-Cj-alkylthio, or pharmaceutically acceptable salts thereof,
20. The β-secretase inhibitor of anyone of claims 15 to 19 having formula (IV)
Figure imgf000044_0002
wherein Rg = H or halogen,
R7 = H, Ci-C4-alkyl, C;i_-C4-alkoxy, Ci-C^ alkylcarbonyl, halo-C]_-C4-alkyl, cyano or halogen, Rg = H, C]_-C4-alkyl, cyano or halogen, Rg = H, C]_-C4~alkyl, Ci-C^-alkoxy or halo- C]_-C4-alkyl,
Rχθ = H or halogen, and Y, U and D are as defined above, or pharmaceutically acceptable salts thereof.
21. The β-secretase inhibitor of claim 20, wherein Rg = H or halogen,
R7 = H, C]_-C4-alkyl, C]_-C4-alkoxy, C1-C4- alkylcarbonyl, halo-C]_-C4~alkyl or halogen, Rg = H, C]_-C4-alkyl or halogen, Rg = H, C]_-C4-alkyl, Ci-C^-alkoxy or halo- C]_-C4-alkyl,
RlQ = H or halogen, and
Y, U and D are as defined above, or pharmaceutically acceptable salts thereof.
22. The β-secretase inhibitor of anyone of claims 15 to 21, wherein
Rs = H or Br,
R7 = H, Cl, CH3, OCH3, CO-CH3, CN, CF3,
R8 = H, CH2CH3, CH3, Cl, CN R9 = H, CH3, OCH3, CF3, and
R10 = H, Br,
Y, U and D are as defined above, or pharmaceutically acceptable salts thereof.
23. The β-secretase inhibitor of claim 20, wherein
Rg = H or Br, preferably H R7 = H, Cl, CH3, OCH3, CO-CH3, CF3, preferably H, CH3, OCH3, CO-CH3, CF3 f Rg = H, CH2CH3, CH3, Cl, preferably H, Cl,
Rg = H, CH3, OCH3, CF3, preferably H, CH3, OCH3, CF3, R^o = H, Br, preferably H, and
Y, U and D are as defined above, or pharmaceutically acceptable salts thereof,
24. The β-secretase inhibitor of anyone of claims 15 to 23, wherein n is 0 and
Figure imgf000046_0001
is
1
Figure imgf000046_0002
wherein R4 is CH3, CH(CH3J2, and Rχi is CH3, CH2CH3, CH2-C6H5,
or
Figure imgf000046_0003
wherein R]_2 is CH3 or CH2CH3, in particular
CH2CH3
or
Figure imgf000047_0001
wherein R5 is - (CH2)m (CR13) (OAr), wherein Rχ3 is H, C]_-C4-alkyl, in particular methyl, Ar is phenyl or heteroaryl, in particular phenyl, and m = 0, 1 or 2, or pharmaceutically acceptable salts thereof.
25. A β-secretase inhibitor of formula (V)
Figure imgf000047_0002
wherein R is as defined above, U = -CH2-, C=O, -(CH2)I1S-, -(CH2)nO-,
-(CH2JnNH-, or -(CH2 ) ri¬ ll- (CH2) n-/ wherein the heterocycle is op¬
tionally substituted, in particular by one or two C2-C4- alkyl groups or such that a bicycle is formed, n independently from each other is 0, 1 or 2, Bl, B3, B5 are independently selected from N or C --RP'
B2 and B4 are independently selected from C-
R' , and
R' is independently from each other selected from the group comprising hydrogen, halogen, in particular F, a C^-Cg-alkyl group, in particular a C1-C4- alkyl group, an amido group, an ester group, a
-SO2-N O group
or two adjacent R' form a group
Figure imgf000048_0001
and n independently from each other is 0, 1 or 2, or pharmaceutically acceptable salts thereof.
26. The β-secretase inhibitor of claim 25 having formula (VI)
Figure imgf000049_0001
wherein
R7 is selected from H, CH3, OCH3, COCH3
Bl is selected from
B2 is selected from
Figure imgf000049_0002
B3 is selected from N, CF,
Figure imgf000049_0003
B4 is selected from CH, C-N(CH3J2, C-NHC (CH3) 3 B5 is selected from N or CH, or B4 and B5 are both CR' wherein said two R' together form a group of type
Figure imgf000049_0004
and [U]n is selected from -(CH2^NH- I
Figure imgf000049_0005
or pharmaceutically acceptable salts thereof.
27. Use of a β-secretase inhibitor of anyone of the preceding claims, or a pharmaceutically acceptable salt thereof, in the manufacture of a medicament for inhibiting the production and/or the accumulation of amyloid β-protein in warm blooded mammals, in particular human beings, especially for the treatment of Alzheimer's disease and or Down's syndrome and/or aging of brain.
28. A pharmaceutical composition comprising at least one β-secretase inhibitor of anyone of claims 1 to 26, or a pharmaceutically acceptable salt thereof, together with a pharmaceutically acceptable carrier and optionally one or more adjuvants.
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