WO2005054293A1 - Rgd targeting moiety its porduction and use - Google Patents

Rgd targeting moiety its porduction and use Download PDF

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Publication number
WO2005054293A1
WO2005054293A1 PCT/EP2004/013860 EP2004013860W WO2005054293A1 WO 2005054293 A1 WO2005054293 A1 WO 2005054293A1 EP 2004013860 W EP2004013860 W EP 2004013860W WO 2005054293 A1 WO2005054293 A1 WO 2005054293A1
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polypeptide
diseases
group
composition
amino acid
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PCT/EP2004/013860
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French (fr)
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Roland Kontermann
Peter Höllig
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Pharmexa A/S
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Priority to CA002544888A priority Critical patent/CA2544888A1/en
Priority to AU2004295126A priority patent/AU2004295126A1/en
Priority to EP04819662A priority patent/EP1689778A1/en
Priority to JP2006541919A priority patent/JP2007535909A/en
Publication of WO2005054293A1 publication Critical patent/WO2005054293A1/en

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    • C07K14/78Connective tissue peptides, e.g. collagen, elastin, laminin, fibronectin, vitronectin, cold insoluble globulin [CIG]
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    • A61K47/00Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
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    • A61K47/62Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the non-active ingredient being a modifying agent the modifying agent being a protein, peptide or polyamino acid
    • A61K47/64Drug-peptide, drug-protein or drug-polyamino acid conjugates, i.e. the modifying agent being a peptide, protein or polyamino acid which is covalently bonded or complexed to a therapeutically active agent
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    • C07KPEPTIDES
    • C07K1/00General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length
    • C07K1/04General methods for the preparation of peptides, i.e. processes for the organic chemical preparation of peptides or proteins of any length on carriers
    • C07K1/047Simultaneous synthesis of different peptide species; Peptide libraries
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    • C07KPEPTIDES
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    • C07KPEPTIDES
    • C07K7/00Peptides having 5 to 20 amino acids in a fully defined sequence; Derivatives thereof
    • C07K7/04Linear peptides containing only normal peptide links
    • C07K7/06Linear peptides containing only normal peptide links having 5 to 11 amino acids

Definitions

  • the present invention relates to novel RGD comprising polypeptides, compositions and complexes comprising them as well as their use, in particular for the therapy of proliferative diseases, immune diseases, infectious diseases, vascular diseases, rheumatoid diseases, diseases, in which cells in or adjacent to a disease site express ⁇ 3 and/or ⁇ y ⁇ s integrin and inflammatory diseases.
  • the delivery of drugs to only specific sites within the body is one central goal of targeted drug therapy.
  • the concept depends on the differential expression of certain target structures only in a subpopulation of tissues or cell types of the body. Therefore, many groups have tried to elucidate differences in the expression of cell surface markers among different tissue types or between the healthy and diseased state of a tissue or cell.
  • Targeted drug delivery is an attractive concept in particular for cancer chemotherapy, which usually administers highly toxic substances systemically.
  • targeted drug delivery to primarily to the tumor cells or at least primarily into the vicinity of the tumor cells would allow to either increase the amount of chemotherapeutic, which can be administered at the same level of systemic toxicity but with an increased effect at the tumor site, or to decrease the amount of chemotherapeutic, which is administered thus lowering the systemic toxicity while still eliciting the same effect at the tumor site.
  • ⁇ 3 and ⁇ 5 integrins represent particular attractive target structures since they are upregulated in proliferating endothelial cells of the tumor vasculature. Targeting of the tumor vasculature, thus, represents a promising new approach for targeted cancer therapy (Matter (2001) Drug Discov. Today 6:1005-1024).
  • Vascular targeting agents are designed to deliver cytotoxic, anti-angiogenic, procoagulant, or proapoptotic substances specifically to the vasculature of tumors.
  • the employed ligands recognize structures associated with tumor blood vessels, i.e. proteins expressed by endothelial cells or associated with the extracellular matrix (Thorpe et al., (2003) Cancer Res.
  • ⁇ 3 and ⁇ 5 integrins are found on different tumor cells including metastatic melanoma cells (Conforti et al. (1992) Blood 80:437-446; Gehlsen et al.
  • a polypeptide comprising at least one binding peptide having an amino acid sequence as indicated by the general formula (I) X 1 X 2 X 3 Y 1 Y 2 Y 3 Y 4 Y 1 X 4 X 5 X 6 or by the general formula (II) X7X8X9Y1Y2Y3Y4Y1X10Y1X11, in which:
  • Y is Asp X] is Ala, Leu, Phe or Ser, in particular Ala or Leu;
  • X 2 is Arg, Leu, Phe, Pro, or Ser, in particular Arg or Ser;
  • X 3 is Ala, Gly, Leu, Ser, Tyr, or Nal, in particular Gly, Leu, or Tyr;
  • X 4 is Gin, Phe, Ser, or Nal, in particular, Phe or Nal;
  • X 5 is Arg, Asp, Glu, or Gin, in particular Asp or Gin;
  • X 6 is Ala, Gin, Glu, Gly, Phe, or Nal, in particular Ala, Gin or Gly;
  • X 7 is Glu, Phe, Pro, or Nal, in particular Glu or Nal;
  • X 8 is Ala or Cys, in particular Cys
  • X 9 is Asp, Cys, Gin, or His, in particular Gin;
  • X 10 is Leu, Phe, or Nal, in particular Leu; and X ⁇ Gin, Phe, Pro, or Nal, in particular Pro,
  • X ls X 2 , X 3 , X 4 , X 5 , X 6 , X 7 , X 8 , X9, Xio, Xu, Yi, Y2, Y3, Y4 are independently of each other the D or L amino acid or the amino acid residue mimetic of the respectively indicated amino acid;
  • polypeptides according to formula I have a particular high binding affinity for ⁇ 3 and/or ⁇ 5 integrins, while polypeptides according to structure (II) have a high binding activity albeit they require only one oxidation step for stabilizing the RGD motive.
  • amino acid residue mimetic refers to a moiety, that conformationally and/or functionally serves as a substitute for a particular amino acid in a peptide compound without adversely interfering to a significant extent with the function of the peptide (e.g., interaction of the peptide with ⁇ 3 and/or ⁇ 5 integrins) and shall include pseudomimetics and secondary structure mimetics (as described in Peptides: Chemistry and Biology by Norbert Sewald (Author), Hans-Dieter Jakubke (Author), Publisher: Wiley-NCH).
  • Author Norbert Sewald
  • Author Hans-Dieter Jakubke
  • Publisher: Wiley-NCH By substituting amino acids with their mimetics the peptide or polypeptide retains many of the biologically important structural features of its parent while possessing a reduced or modified peptidic character.
  • Amino acid residue mimetics do not necessarily have to make the same contacts as the amino acid they replace it is often sufficient if they do not alter the overall conformation in such that the function, e.g. the binding to ⁇ 3 and/or ⁇ 5 integrins, is not significantly affected. In some circumstances, substitution with an amino acid residue mimetic may actually enhance properties of the peptide (e.g., interaction of the peptide with ⁇ 3 and/or ⁇ 5 integrins or stability or oral uptake of the peptide). Amino acid residue mimetics for the amino acids making up the binding peptide of the polypeptide of the present invention are well known in the art and approaches to designing peptides including amino acid residue mimetic are also well known in the art.
  • the strength of the interaction of a polypeptide of the present invention comprising one or more amino acid residue mimetics can be determined by a wide variety of assays known in the art and which are suitable to determine the binding between two chemical entities and comprise without limitation the binding assays described in the examples as well as methods as ELISA and plasmon resonance. Polypeptides comprising one or more amino acid residue mimetics are still considered to show no significant decrease in binding if they posses at least 30%, preferably at least 50%, more preferably at least 75% and most preferably at least 100% of the binding strength of a polypeptide comprising a binding peptide entirely made up of L amino acids.
  • amino acid residue mimetics for the amino acids making up the binding peptide comprise but are not limited to:
  • Ala alanine substituted at the carbon or nitrogen residue with alkl, cycloalkyl or aryl;
  • Cys cy stein substituted at the sulfur atom with alkyl, alkenyl or phenyl optionally substituted with halo, cyano, nitro, haloalkyl, amino, aminoalkyl, dialkylamino, alkyl, alkoxy, haloalkoxy, carboxyl, carboalkoxy, alkylcarboxamide, arylcarboxamide, alkylthio or haloalkylthio;
  • Gin glutamine substituted at the nitrogen atom with alkyl, alkenyl, alkynyl, alkoxyalkyl, alkylthioalkyl, alkylaminoalkyl, dialkylaminoalkyl, carboxyalkyl, alkoxycarbonyl alkyl or cycloalkyl, bicycloalkyl, cycloalkyl alkyl, bicycloalkyl alkyl or fused aryl- cycloalkyl alkyl optionally comprising 1 or more heteroatoms selected from N, O and S;
  • Glu aryl and alkyl esters of glutamic acid
  • Gly glycine substituted at the carbon or nitrogen residue with alkl, cycloalkyl or aryl, in particular t-butyl glycine;
  • Phe homo-phenylalanine, dehydro-phenylalanine, indoline-2- carboxylic acid; tetrahydroisoquinoline-2-carboxylic acid optionally substituted with halo, cyano, nitro, haloalkyl, amino, aminoalkyl, dialkylarino, alkyl, alkoxy, haloalkoxy, carboxyl, carboalkoxy, alkylcarboxamide, arylcarboxamide, alkylthio or haloalkylthio; Ser: serine substituted with alkyl or aryl;
  • Tyr tyrosine substituted with alkyl or aryl
  • polypeptide refers to a chain of naturally and/or non-naturally occurring amino acids , including for example D amino acids, linked via peptide bonds to each other.
  • the length of the amino acid chain is not particular limited as long as it comprises at least the binding peptide having an amino acids sequence as specified above.
  • the polypeptide still shows no significant decrease of the interaction with its target, e.g. ⁇ 3 and/or ⁇ 5 integrins as defined above.
  • X] is Ala or Leu; X 2 is Arg or Ser;
  • X 3 is Gly, Leu or Tyr
  • X 4 is Phe or Val
  • X 5 is Asp or Gin
  • X 6 is Ala, Gin, or Gly;
  • X 7 is Glu or Val;
  • X 8 is Cys
  • X 9 is Gin
  • Xio is Leu
  • Xu is Pro, wherein X X 2 , X 3 , X_ 4 , X 5 , X 6 , X 7 , X 8 , X 9 , X ⁇ 0 , Xu, Yi, Y 2 , Y 3 , Y 4 are independently of each other the D or L amino acid or the amino acid residue mimetic of the respectively indicated amino acid or said amino acid sequence, which lack 1 or 2, preferably 1, amino acid(s) from the N-terminus or C-terminus or 1 amino acid from the N- and C- terminus.
  • polypeptide of the present invention comprises at least one binding peptide with an amino acid sequence as indicated in SEQ ID NOs. l to l5.
  • polypeptide of the present invention has a length of preferably 500, 450, 400, 350, 300, 250, 200, 100, 90, 80, 70, 60, 50, 40, 30, 20, 19, 18, 17, 16, 15, 14, 13, 12, 11, 10 or 9 amino acids.
  • Particular preferred are polypeptides with a length of between about 10 to 20 amino acids.
  • polypeptide of the present invention can comprise additional encoded proteins, which can be essentially any desired protein or protein fragment, however, in preferred embodiments of the invention the polypeptide comprising the binding peptide further comprises a protein selected from the group consisting of a cytokine, a chemokine, a growth factor, an adhesion molecule, an antibody light and/or heavy chain, a single chain antibody, a toxin, an enzyme, a receptor ligand, a lytic peptide, a membrane insertion sequence and a fluorescent protein or fragment thereof.
  • a protein selected from the group consisting of a cytokine, a chemokine, a growth factor, an adhesion molecule, an antibody light and/or heavy chain, a single chain antibody, a toxin, an enzyme, a receptor ligand, a lytic peptide, a membrane insertion sequence and a fluorescent protein or fragment thereof.
  • Such fusion polypeptides can provide an efficient way of recruiting the one or more additionally encoded protein or fragment thereof to cells expressing ⁇ 3 and/or ⁇ 5 integrins.
  • a cytokine, a chemokine or a prodrug thereof or a toxin is delivered to a cell expressing one of the mentioned integrins a localized cytotoxic effect can be obtained.
  • the polypeptide is attached to at least one chemical moiety.
  • attached means a direct or indirect, covalent or non-covalent bond and connection, respectively, between a polypeptide of the present invention and another chemical entity.
  • chemical moiety or “entity” as used interchangeably herein is not limited to a particular type of a chemical substances, however, in a preferred embodiment the chemical moiety is selected from the group consisting of a spacer, a marker, a tag, and a lipid and in particular a phospholipid, a drug, a capping group and a spacer attached to a second chemical moiety.
  • a "capping group" within the meaning of the present invention is a chemical moiety which protects the molecule to which it is attached from, for example, chemical or enzymatic degradation.
  • the capping group or groups can be attached directly to the polypeptide of the present invention or to any other chemical moiety, which is itself attached to the polypeptide of the present invention.
  • a capping group is attached to one or both ends to avoid or minimize degradation by, for example, exoproteinases or the like.
  • the capping groups of the present invention have in a preferred embodiment one of the following structures: R A
  • A is an amino acid or an amino acid residue mimetic of the polypeptide of the present invention or any other chemical moiety attached to the polypeptide of the present invention and R and R' each independently have the meaning: -C(O)R ⁇ , - C(O)NHR b -S(O)2Rl, -C(O)OR h CRi or R h wherein Ri can have the meaning H; linear or branched alkyl, in particular lower alkyl (Ci, C 2 , C 3 , C 4 , and C 5 , e.g.
  • ethenyl 1-propenyl, 2-propenyl, iso-propenyl, 1-butenyl, 2-butenyl, 3-butenyl; substituted linear or branched alkenyl, in particular lower substituted alkenyl; linear or branched alkynyl, in particular lower alkynyl (C 2 , C 3 , C 4 and C 5 ); substituted linear or branched alkynyl, in particular lower substituted alkynyl; linear or branched alkanol, in particular lower alkanol (Ci, C 2 , C 3 , C 4 , and C 5 ); linear or branched alkanal, in particular lower alkanal (Ci, C 2 , C 3 , C 4 , and C 5 , e.g.
  • aryl in particular phenyl; substituted aryl, in particular substituted aryl; haloalkyl, in particular lower haloalkyl (Ci, C2, C 3 , C , and C 5 ); haloalkoxy, in particular lower haloalkoxy (Ci, C 2 , C 3 , C , and C 5 ); heteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; substituted heteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; aryl, in particular C 5 to 2 ); alkylaryl, in particular C 5 to C ⁇ 2 , e.g.
  • benzyl isoquinolinyl, quinolinyl, naphthyl; substituted alkylaryl, in particular C 5 to C ⁇ 2 , e.g. substituted benzyl; alkylheteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S optionally comprising 1 to 4 heteroatoms selected from N, O, S; substituted alkylheteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; aminoalkyl, in particular Ci, C 2 , C 3 , C 4 and C 5 , e.g.
  • R and R' form a ring comprising 5-7 atoms selected from C, N, S and O; or
  • R and R' are independently toluenesulfonyl, methanesulfonyl, FMOC or (+)- menthyloxy-CO-.
  • spacer refers to a chemical moiety, which serves the purpose of providing the accessibility of the binding peptide even when attached to other chemical moieties which might otherwise sterically hinder the binding of the polypeptides of the present invention to its target structures.
  • Spacer within the meaning of the present invention are a linear extension of at least 0.5 nm preferably the spacer has a linear extension of between 1 and 10 nm and even more preferably between 2 and 5 nm.
  • the spacer is preferably a linear or branched saturated or unsaturated carbohydrate chain.
  • the carbohydrate chain preferably comprises multimeric repeats of a monomeric building block. Depending on the length of the respective monomeric building block between 2 and 10 multimeric repeats of the monomeric building blocks are preferred.
  • the spacer is hydrophilic.
  • the spacer can comprise a functional group which allows attachment to the polypeptides of the present invention on one terminus and another functional group on the other terminus, which allows attachment of the spacer to another chemical moiety.
  • Preferred spacers are bifunctional molecules in particular bifunctional polyethylene or polypropylene glycol derivatives comprising preferably between about 1 and 40 repeat units, oligopeptides comprising natural and/or synthetic amino acids and preferably between 1 to 40 preferably 2 to 20 and more preferably 2 to 10 amino acids.
  • a particular preferred building block of a spacer of the present invention is 8-amino-3, 6- dioxatanoic acid (doo) and spacers comprising between 1 to 10 repeat units of doo are preferred. Spacers comprising between 2 and 5 doo units being more preferred and spacers comprising 3 doo units being most preferred. In the context of liposomes it has been discovered that there is an optimal length of the spacer, which is between 2 and 5 nm.
  • spacers with a length of less than 0.5 nm will in most cases not provide enough distance from, for example, the liposomal surface to which the polypeptides of the present invention has been attached to allow efficient interaction, i. e. binding, between the binding peptides of the present invention and integrin bearing cells.
  • spacers, which are longer than 10 nm show an increasing "floppiness" which is also detrimental to the binding to cells.
  • the term "marker” refers to a chemical moiety which is directly or indirectly detectable by analytical methods including measurement of fluorescence, nuclear magnetic resonance, computer tomography or scintigrams and comprises without limitation electron dense molecules, paramagnetic molecules, superparamagnetic molecules, radioactive molecules like, for example, 13 N, 15 O, 18 F, 51 Gr, 54 Fe, 60 Co, 67 Ga, 75 Se, 9 ra Tc, m In, 112m Ag, 113m In, 123 L 133 Xe, 148 Au, 35 S, 33 P, 32 P, or ⁇ C, non-radioactive isotopes, which include, for example, H and C, and fluorescent molecules or molecules generating fluorescence or light emission like, for example, green fluorescent protein, luciferase, and a variety of fluorescent dies all of which are well known to someone of skill in the art.
  • tag refers to chemical moieties, which allow purification of the polypeptides or complexes comprising the polypeptides of the present invention like, for example, biotin, Chitin-tag, Myc-tag, His-tag or the like, which are all well known in the art.
  • the polypeptide of the present invention is attached directly or indirectly to a lipid.
  • the type of lipid to which the polypeptide can be attached is not particular limited.
  • the respective lipid can be inserted or incorporated into lipid-based carriers like, for example, liposomes or virosomes.
  • Particularly suitable lipids are glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphonolipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroids, stearines, steroles, and/or carbohydrate containing lipids.
  • Particularly preferred lipids for the attachment of the polypeptides of the present invention are phospholipids preferably phosphatidylcholine (PC), phosphatidylserine (PS), and phosphatidylethanolamine (PE), in particular distearoylphosphatidyl (DSPE) or alpha-(dipalmitoylphosphatidyl (DPP)) which are often included in liposomes used for delivery of drugs.
  • PC phosphatidylcholine
  • PS phosphatidylserine
  • PE phosphatidylethanolamine
  • DSPE distearoylphosphatidyl
  • DPP alpha-(dipalmitoylphosphatidyl
  • the lipid attached to the polypeptide of the present invention is selected from the group consisting of N-caproylamine-PE, N-dodecanylamine-PE, phophatidylthioethanol, N- [4-(p-maleimidomethyl)cyclohexane-carboxamide-PE (N- MCC-PE), N-[4-(p-maleimidophenyl)butyramide]-PE (N-MPB), N-[3-(2- pyridyldithio)propionate]-PE (N-PDP), N-succinyl-PE, N-glutaryl-PE, N-dodecanyl-PE, N-biotinyl-PE, N-biotinyl-cap-PE, phosphatidyl-(ehtylene glycol), PE-polyethylene glycol (PEG)-carboxylic acid, PE-PEG-maleimide, PE-PEG-PDP, PE-P
  • the polypeptide of the present invention is attached to at least one drug.
  • drug encompasses any therapeutically active compound and in particular compounds are selected from the group consisting of immunosuppressants, immunostimulants, antibiotics, antiinfectives, antiallergics, cytostatics, cytotoxic agents and prodrugs thereof, mitogens, chemokines, cytokines, dermatics and/or physiological or pharmacological inhibitors of mitogens, chemokines or cytokines.
  • the drug is attached to the polypeptide of the present invention in such a way that it is releasable and preferably the release of the drug is primarily effected in the tissues or areas of the body to which the polypeptide of the present invention binds i. e. primarily in tumor endothelium or tumors.
  • Particularly preferred means of attachment of the drug are short polypeptide stretches which are cleavable, for example, by enzymes which are released at the target site.
  • the drugs are released in the tumor endothelium or in tumors. Enzymes of this type include, for example metalloproteinases.
  • Such releasable connections are known in the art and can be selected to provide a further specificity on top of the specificity already achieved by the target specific binding of the polypeptides of the present invention.
  • the inclusion of such a cleavage site is particularly desirable, in cases in which a drug attached to the polypeptides of the present invention exerts a cytotoxic and/or growth inhibitory effect on cells once it is released.
  • the spacer is attached at one side to the polypeptide of the present invention and on the other side to a second chemical moiety.
  • the second chemical moiety is selected from the group consisting of a drug, a marker, a tag and a lipid.
  • drug drug, marker, tag, and lipid
  • a further aspect of the present invention is a polynucleotide encoding at least one polypeptide of the present invention comprising a binding peptide which has an amino acid sequence as outlined above.
  • the nucleic acid molecules of the invention can be DNA, cDNA, genomic DNA, synthetic DNA or RNA and can be double-stranded or single-stranded, the sense and/or antisense strand.
  • the polynucleotide molecules of the invention can contain any sequence which due to the degeneracy of the genetic code, encode a polypeptide comprising a binding peptide having an amino acid sequence as outlined above and preferably one of the amino acid sequences indicated in SEQ ID NOs. 1-15.
  • nucleic acid molecules of the present invention are not limited to coding sequences, e.g. they can include none-coding sequence that can be located upstream or downstream from a sequence encoding the polypeptides of the present invention.
  • the polynucleotide molecules of the invention can be synthesized in vitro, for example, by phosphoramidite-based synthesis or can be obtained from a cell such as a bacterial cell, or mammalian cell.
  • a further aspect of the present invention is a vector containing the polynucleotide of the present invention.
  • the term "vector” as used herein refers to a means for introducing the polynucleotides of the present invention into cells in particular for maintenance and propagation.
  • the vector of the present invention comprises plasmids, phagemids, phages, cosmids, artificial mammalian or yeast chromosomes, knock-out or knock-in constructs, viruses in particular adeno-viruses, vaccinia-viruses, attenuated vaccinia-viruses, canary pox viruses, lentiviruses (Chang, L. J. Gay, E. E. (2001) Curr.
  • Herpes viruses in particular Herpes simplex virus (HSV-1) (Carlezon, W. A. et al. (2000) Crit. Rev. NeurobioL), baculovirus, retrovirus, adeno-associated virus (AAV; Carter, P. J. and Samulski, R. J. (2000) J. Mol. Med. 6: 17-27), rhinovirus, human immune deficiency virus (HIV), Filovirus and engineered versions thereof (see, for example, Cobinger G. P. et al. (2001) Nat. Biotechnol. 19: 225-230), virosomes, "naked” DNA, liposomes and nucleic acid coated particles, in particular gold spheres.
  • HSV-1 Herpes simplex virus
  • AAV adeno-associated virus
  • HAV adeno-associated virus
  • HAV human immune deficiency virus
  • Filovirus and engineered versions thereof (see, for example, Cobinger G. P. et al. (2001
  • Liposomes are in general small unilamellar or multilamellar vesicles made of cationic, neutral and/or anionic lipids, for example, by ultrasound treatment of lipid suspensions.
  • the DNA can, for example, be ionically bound to the surface of the liposome or internally enclosed in the liposome.
  • Suitable lipid mixtures are known in the art and comprise for example DOTMA (1, 2- dioleyloxypropyl-trimethylamoniumbromid) and DPOE (dioleylphosphatidyl- ethanolamine) which both have been use for transfection or transduction of a variety of cell lines.
  • DOTMA 1, 2- dioleyloxypropyl-trimethylamoniumbromid
  • DPOE dioleylphosphatidyl- ethanolamine
  • Nucleic acid coated particles are another means for the introduction of nucleic acids into cells using so called “gene-guns" which allow the mechanical introduction of particles into the cells.
  • the particles itself are inert and, therefore, are in a preferred embodiment made out of gold spheres.
  • the polynucleotide of the present invention is operatively linked to one or more expression control sequences allowing expression in prokaryotic and/or eukaryotic host cells.
  • expression control sequences are preferably transcriptional/translational regulatory elements, which include but are not limited to inducible and non-inducible, constitutive, cell cycle regulated, metabolically regulated promoters, enhances, operators, silencers, repressors and other elements that are known to those skilled in the art and that drive or otherwise regulate gene expression.
  • regulatory elements directing constitutive expression include, promoters transcribed by RNA polymerase III like, e.g., promoters for the snRNA U6 or scRNA 7SK gene; viral promoter and activator sequences derived from, e.g., NBV, HCN, HSN, HPN, EBV, HTLV, CMV, SV40, MMTV or HIV, in particular the cytomegalovirus hCMV immediate early gene, the early or late promoters of SV40 adenovirus directing inducible expression like, for example, CUP-1 promoter, the tet-repressor as employed, for example, in the tet-on or tet-off systems, the lac system, the trp_ system; tissue specific expression elements; cell cycle specific expression elements like, for example, cdc2, cdc25C or cyclin A; or the TAC system, the TRC system, the major operator and promoter regions of phage A, the control regions
  • operatively linked means incorporated into a genetic construct so that expression control sequences effectively control expression and/or translation of a coding sequence of interest.
  • Another aspect of the present invention is a host cell genetically engineered with the polynucleotide or the vector as outlined above.
  • the host cells that may be used for purposes of the invention include but are not limited to prokaryotic cells such as bacteria (for example, E. coli and B.
  • subtilis which can be transformed with, for example, recombinant bacteriophage D ⁇ A, plasmid D ⁇ A, or cosmid D ⁇ A expression vectors containing the polynucleotide molecules of the invention; simple eukaryotic cells like yeast (for example, Saccharomyces and Pichia), which can be transformed with, for example, recombinant yeast expression vectors containing the polynucleotide molecule of the invention; insect cell systems like, for example, Sf9 of Hi5 cells, which can be infected with, for example, recombinant virus expression vectors (for example, baculovirus) containing the polynucleotide molecules of the invention; Xenopus oocytes, which can be injected with, for example, plasmids; plant cell systems, which can be infected with, for example, recombinant virus expression vectors (for example, cauliflower mosaic virus (CaMV) or tobacco mosaic virus (TMN)) or transformed with recombin
  • Also useful as host cells are primary or secondary cells obtained directly from a mammal and transfected with a plasmid vector or infected with a viral vector.
  • the polynucleotide can integrate, for example, into the chromosome or the mitochondrial D ⁇ A or can be maintained extrachromosomally like, for example, episomally or can be only transiently comprised in the cells.
  • a further aspect of the present invention is a transgenic non-human animal containing a polynucleotide, a vector and/or a host cell as described above.
  • the animal can be a mosaic animal, which means that only part of the cells making up the body comprise polynucleotides, vectors, and/or cells of the present invention or the animal can be a transgenic animal which means that all cells of the animal comprise the polynucleotides and/or vectors of the present invention or are derived from a cell of the present invention.
  • Mosaic or transgenic animals can be either homo- or heterozygous with respect to the polynucleotides of the present invention contained in the cell.
  • the animals can in principal be any animal, preferably, however, it is a mammal, selected from the group of non-human primate, horse, bovine, sheep, goat, pig, dog, cat, rabbit, mouse, rat, guinea pig, hamster, or gerbil.
  • polypeptides of the invention comprising binding peptides can be used directly as a therapeutic or in combination with additional substances and, therefore, the present invention in a further aspect relates to a composition comprising at least one polypeptide of the present invention and at least one further component selected from the group consisting of liposomes, virosomes, microsphere, niosomes, dendrimeres, stabilizers, buffers, excipient, additives.
  • Liposomes are single or multilamellar lipid vesicles of varying size.
  • the size is preferable between 10 and 1000 nm and more preferably between 50 and 500 nm and most preferably between 80 and 200 nm.
  • Virosomes are liposomes with a lipid composition closely resembling the lipid composition of viruses and which in preferred embodiments have proteins integrated into the membrane (Kaneda (2000) Adv. Drug. Deliv. Rev. 43:197-205).
  • Microspheres are spherical particle with large size (up to 2 mm) and rigid morphology containing a core substance (Ravi & Kumar (2000) J. Pharm. Sci. 3:234-258).
  • Niosomes are non-ionic surfactant vesicles (Baillie et al. (1985) J. Pharm. Pharmacol. 37:863-868). Dendrimers are synthetic, highly branched, mono- disperse macromolecules of nanometer dimensions (Patri et al. (2002) Curr. Opin. Chem. Biol. 6:466-471). Buffers comprised in the composition of the present invention can be any physiological buffer substances including, for example phosphate buffer or Hepes.
  • Excipients which facilitate production and administration of the compositions of the present invention are the art known excipients and include, for example, alginates, calcium carbonate, dextrose, fructose, lactose, maltose, maltodextrin, and the like.
  • Stabilizers are also known in the art and comprise, for example, ⁇ -tocopherol and various carbohydrates.
  • the polypeptide is integrated into or attached to a liposome, virosome, microsphere, niosome or dendrimer, which allows the respective entity to be target to sites and tissues in the body expressing ⁇ 3 and/or ⁇ 5 integrins.
  • Polypeptides can be attached to one of the components, which are used for the generation of liposomes, virosomes, microsphere, niosomes, or dendrimers prior, during or after formation of the respective structure.
  • polypeptides of the present invention which are linked to a lipid either with or without an intervening spacer as defined above are integrated into the lipid mono or multilayer of the liposome or virosome.
  • the polypeptide is primarily comprised on the outer surface of the respective liposome or virosome to allow interaction of the polypeptides of the present invention with their targets preferably upon administration of the composition of the present invention to a patient.
  • the polypeptide of the present invention will be attached to between about 0,1 mol% to about 10 mol% of all components which are used for the generation of the respective structure. This ranges are particular preferred for liposomes and virosomes.
  • the liposomes or virosomes of the present invention comprise lipids selected from the group consisting of glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphonolipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroid, stearines, steroles, and carbohydrate containing lipids.
  • the liposome or virosome comprises cholesterol (CH) and sphingomyelin (SM).
  • More preferably cholesterol is comprised in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of about 40 to about 60 mol% and more preferably of about 45 to about 55 mol% and most preferably of about 48 to about 52 mol%.
  • SM on the other hand is preferably present in relation to the total molar lipid composition of the liposome at a molar ratio of about 10 to about 20 mol% and more preferably of about 11 to 18 mol% and most preferably of about 12 to about 16 mol%.
  • the liposome or virosome comprises in relation to the total molar lipid composition CH and SM at a molar ration of about 40 to about 60 mol% and of about 10 to about 20 mol%, respectively, and even more preferred at a molar ratio of about 45 to about 55 mol% and of about 11 to about 18 mol%, respectively and most preferably of about 48 to about 52 mol% and of about 12 to about 16 mol%, respectively.
  • the liposomes or virosomes which are comprised in the composition to the present invention contain (a) further lipid(s). This(These) is(are) preferably selected from the above indicated preferred lipids. In preferred embodiments at least one of the additional lipids is selected from PE and PC. In a particular preferred embodiment PE is present in the liposome or virosome of the present invention and in particular, if CH and SM are also present in the liposome or virosome. Preferably CH and SM are present together with PE in the above indicated preferred and particularly preferred ranges.
  • PE itself is present in preferred embodiments in relation to the total molar lipid composition of about 5 to about 25 mol%, preferably about 10 to about 20 mol% and most preferably about 12 to about 18 mol%.
  • CH, SM, and PE are present in above indicated preferred or particular preferred ranges.
  • the additional lipids comprise PE and PC and in a preferred embodiment PE and PC are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of about 5 to about 25 mol% and about 15 to about 40 mol%, respectively.
  • PE and PC are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of about 5 to about 25 mol% and about 15 to about 40 mol%, respectively.
  • the above ranges for PE are PC particular preferred, if the molar ratio of CH and SM are as indicated above.
  • any of the components making up the membrane of the liposomes of the present invention can be attached to a further chemical moiety.
  • the term chemical moiety is not particular limited. However, in preferred embodiments the chemical moiety is a targeting moiety as discussed in more detail below or a stabilizing moiety. Stabilizing moieties within the meaning of this invention increase the circulation time of the liposome once it is administered. Particular preferred stabilizing moieties are ganglioside GM1, phosphatidylinositol or PEG, particular preferred PEGs have a molecular mass between about 1,000 and about 10,000 g/mol, more preferably about 5,000 g/mol.
  • the chemical moieties in particular the stabilizing moieties are attached to only a fraction of the molecules making up the membrane of the liposomes. It is preferred that between about 1 to about 20 mol% of the components of the liposomal membrane carry an attached chemical moiety, more preferably between about 3 and about 10 mol% and even more preferably about 5 mol%.
  • a preferred liposomal component for attachment of the chemical moiety, in particular for the stabilizing moiety is a lipid component. While different chemical moieties can be attached to different lipid components it is preferred that the chemical moiety(ies) is(are) attached to one or more of the phospholipids comprised within the liposome of the present invention. In a further preferred embodiment the one or more chemical moiety is attached to PE. In particular, if a stabilizing agent like, for example, PEG is used PE is used for attachment.
  • proteins and peptides can be incorporated into the liposome for stabilizing the lipid bilayers of the liposomes of the present invention.
  • Detergents which can be used as bilayer stabilizing components include, but are not limited to, Triton X-100, deoxycholate, octylglucoside and lyso-phosphatidylcholine.
  • Proteins which can be used as bilayer stabilizing components include, but are not limited to, glycophorin and cytochrome oxidase.
  • a liposome can comprise between 0.05 and 15 mol% of a stabilizing agent.
  • composition of the present invention can further comprise a drug.
  • this drug is connected or attached directly or indirectly with a polypeptide of the present invention or comprised or attached to the liposomes, virosomes, microspheres, etc.
  • a drug or diagnostic is comprised within a liposome it is particularly preferred that the drug or diagnostic is comprised in the interior of the liposome or in cases of lipophilic drugs also within or between the lipid bilayers.
  • the drug is comprised within the liposome, virosome, microsome or niosome.
  • a variety of methods are available in the prior art to "load" a liposome, virosome, microsome or niosome with a given drug or diagnostic.
  • the drug and/or diagnostic is/are admixed with the lipid components during formation of the liposomes.
  • Other passive loading methods include dehydration-rehydration (Kirby & Gregoriadis (1984)
  • encapsulating drugs and/or diagnostics include so called “remote loading” or “active loading” in which due to a gradient, for example, a pH or salt gradient between the exterior and the interior of a preformed liposome the drug and/or diagnostic is transported into the liposome along the gradient (see, for example Cheung et al. (1998) Biochim. Biophys. Acta 1414:205-216; Cullis et al. (1991) Trends Biotechnol. 9:268-272; Mayer et al. (1986) Chem. Phys. Lipids 40:333-345).
  • the passive and active loading techniques referred to above and other methods well known in the art can all without limitation employed by the skilled artisan.
  • the most efficient method of loading for any given drug or diagnostic can be determined by routine experimentations by well established procedures. Variables which are typically adjusted are pH, temperature, salt type and concentration, type of buffer etc.
  • the drugs and/or diagnostics are loaded by remote loading into the liposomes, virosomes, microsomes or niosomes, since this method offers a very low loss of the substance to be loaded.
  • a pH gradient is used for loading.
  • the interior of the liposome will typically be acidified with respect to its exterior.
  • the interior will have a pH between 1 and 6 prior to loading with the drug or diagnostic.
  • Particularly preferred drugs are selected from the group consisting of analgesics, antirheumatics, anthelminthics, antiallergics, antianemics, antiarrhythmics, antibiotics, angiogenesis inhibitors, antiinfectives, antidemenics (nootropics), antidiabetics, antidotes, antiemetics, antivertiginosics,, antiepileptics, antihemorrhagics, antihypertonics, antihypotonics, anticoagulants, antimycotics, antitussiv agents, antiviral agents, beta-receptor and calcium channel antagonists, broncholytic and antiastmatic agent, chemokines, cytokines, mitogens, cytostatics, cytotoxic agents and prodrugs thereof, dermatics, hypnotics and sedatives, immunosuppressants, immunostimulants, peptide or protein drugs, in particular hormones and physiological or pharmacological inhibitors of mitogens, chem
  • the polypeptide of the present invention allow the specific targeting of drugs, which can interfere with tumor growth and/or progression of the disease in a targeted manner, therefore, the composition of the present invention are particular suitable for treatment of hyperproliferative diseases associated with neovascularization. Consequently, particular preferred drugs are cytostatics and cytotoxic drugs. A large variety of such drugs are known in the art.
  • cytostatics and cytotoxic drugs are selected from the group consisting of alkylating substances, anti-metabolites, antibiotics, epothilones, nuclear receptor agonists and antagonists, anti-androgenes, anti-estrogens, platinum compounds, hormones and antihormones, interferons and inhibitors of cell cycle-dependent protein kinases (CDKs), inhibitors of cyclooxygenases and/or lipoxygenases, biogeneic fatty acids and fatty acid derivatives, including prostanoids and leukotrienes, inhibitors of protein kinases, inhibitors of protein phosphatases, inhibitors of lipid kinases, platinum coordination complexes, ethyleneimenes, methylmelamines, trazines, vinca alkaloids, pyrimidine analogs, purine analogs, alkylsulfonates, folic acid analogs, anthracendiones, substituted urea, methylhydrazin derivatives, in particular acedia
  • the liposomes of the present invention can comprise anti-angiogenic drugs like, for example, fumagillin analogs, thalidomide, 2-methoxyestradiol, protein tyrosine kinase inhibitors.
  • anti-angiogenic drugs like, for example, fumagillin analogs, thalidomide, 2-methoxyestradiol, protein tyrosine kinase inhibitors.
  • Such drugs are preferred for the treatment of diseases involving activated and/or proliferating endothelial cells
  • cytostatic or cytotoxic drugs in particular those, which are indicated as preferred cytostatic or cytotoxic drugs above.
  • immunosuppressant comprises both substances which lower the activity of immune response as well as substances with an anti-inflammatory action
  • preferred examples are glucocorticoids, in particular beclomethasone, betamethasone, clocortolone, cloprednol, cortisone, dexamethasone, fludrocortisone, fludroxycortide, flumetasone, fluocinolone acetonide, fluocinonide, fluocortolone, fluorometholone, fluprednidene acetate, hydrocortisone, paramethasone, prednisolone, prednisone, prednylidene, pregnenolone, triamcinolone or triamcinolone acetonide, a cyclosporin, in particular cyclosporin A, mycophenolate mofetil, tacrolimus, rapamycin, FK 506, cycloheximide-N-(eth)-2-(e
  • immunosenor encompasses all substances, which influence the function of cells which are involved directly or indirectly in mediation of the immune response, and where the influence leads to an immune response.
  • cells include, for example, macrophages, Langerhans cells and other dendritic cells, lymphocytes, indeterminate cells, but also cells which do not themselves belong to the immune system but are involved in immune disorders of the skin, such as fibroblasts, keratinocytes and melanocytes, but especially Langerhans cells.
  • the strength of the immune response can be determined for example through the amount of cytokines produced (such as interferon-gamma), detection of activation markers on dendritic cells (such as MHCII or CD86) or the number of activated CD8-positive T cells in the skin.
  • cytokines produced such as interferon-gamma
  • detection of activation markers on dendritic cells such as MHCII or CD86
  • the number of activated CD8-positive T cells in the skin can be determined for example through the amount of cytokines produced (such as interferon-gamma), detection of activation markers on dendritic cells (such as MHCII or CD86) or the number of activated CD8-positive T cells in the skin.
  • Immunostimulants for the purpose of the present invention are, in particular, plant immunostimulants which are obtained, for example, from Echinacea pallida or Echinacea purpurea, cytokines such as, for example, interleukins, interferons and colony-stimulating factors, and bacterial constituents or molecules which mimic the latter [such as bacterial DNA and unmethylated oligodeoxynucleotides with CpG sequences, and constituents of the bacterial cell wall or coat, especially the lipopolysaccharides and molecules derived therefrom, such as monophosphoryl-lipid A, muramyldipeptide (N-acetylmuramyl-L- alanyl-D-isoglutamine), and/or PamCys3, and other molecules such as tetanus toxoid, poly-L-arginine or MHCII peptides].
  • cytokines such as, for example, interleukins, interferons and colony-sti
  • antibiotics encompasses, for example, penicillins, cephalosporins, tetracyclines, aminoglycosides, macrolide antibiotics, lincosamides, gyrase inhibitors, sulfonamides, trimethoprim, polypeptide antibiotics, nitroimidazole derivatives, amphenicol, in particular actinomycin, alamethicin, alexidine, 6-aminopenicillanic acid, amoxicillin, amphotericin, ampicillin, anisomycin, antiamoebin, antimycin, aphidicolin, azidamfenicol, azidocillin, bacitracin, beclomethasone, benzathine, benzylpenicillin, bleomycin, bleomycin sulfate, calcium ionophore A23187, capreomycin, carbenicillin, cefacetrile, cefaclor, cefamandole nafate, cefazol
  • antiinfectives encompasses, for example, antimycotics, agents with antiparasitic effect and virustatics, in particular amphotericin, vifonazole, buclosamide, quinoline sulfate, chlormidazole, chlorphenesin, chlorquinaldol, clodantoin, cloxiquine, cyclopirox olamine, dequalinium chloride, dimazole, fenticlor, flucytosine, griseofulvin, ketoconazole, miconazole, natamycin, sulbentine, tioconazole, toinaftate, antiretroviral agents and/or herpes remedies.
  • antiallergics encompasses, for example, substances from the class of globulins, corticoids or antihistamines, in particular beclomethasone and derivatives thereof, betamethasone cortisone and derivatives thereof, dexamethasone and derivatives thereof, bamipine acetate, buclizine, clemastine, clemizole, cromoglicic acid, cyproheptadine, diflucortolone valerate, dimetotiazine, diphenhydramine, diphenylpyraline, ephedrine, fluocinolone, histapyrrodine, isothipendyl, methdilazine, oxomemazine, paramethasone, prednylidene, theophylline, and/or tolpropamine tritoqualine.
  • mitogens encompass, for example, interferon-alpha, interferon-beta, interferon-gamma, interleukin-1, interleukin-2, interleukin-7, interleukin-10, interleukin-12, interleukin-18, GM-CSF, MEP-l- alpha/beta, RANTES, EGF, basic or acidic FGF, PDGF, IGF, VEGF, TGF-beta and/or TNF-alpha.
  • the term "dermatics” encompasses, for example, shale oil sulfonates, tar and tar derivatives, astringents, antihidrotics, acne remedies, antipsoriatics, antiseborrheic agents and/or enzyme preparations for the treatment of skin defects.
  • a further aspect of the invention is the use of the polypeptide of the invention or a polynucleotide, a vector or a cell or a composition of the invention for the production of a medicament for the therapy of a proliferative disease, an immune disease, in particular an autoimmune disease, an infectious disease, a vascular disease, rheumatoid disease, in particular osteoarthritis and rheumatoid arthritis or a disease in which cells in or adjacent a disease site express and in particular overexpress, if compared with healthy or normal tissue, ⁇ 3 and/or ⁇ 5 integrin, and inflammatory diseases.
  • an immune disease in particular an autoimmune disease, an infectious disease, a vascular disease, rheumatoid disease, in particular osteoarthritis and rheumatoid arthritis
  • a disease in which cells in or adjacent a disease site express and in particular overexpress, if compared with healthy or normal tissue, ⁇ 3 and/or ⁇ 5 integrin, and
  • ⁇ 3 and/or ⁇ 5 integrins Since the expression or over expression of ⁇ 3 and/or ⁇ 5 integrins has been reported in particular for proliferative diseases this type of diseases are preferred diseases which can be treated with a polypeptide, a polynucleotide, a vector, a cell or a composition of the present invention.
  • Particular preferred proliferative diseases are selected from the group consisting of carcinomas of the gastrointestinal or colorectal tract, liver, pancreas, kidney, bladder, prostate, endometrium, ovary, testes, melanoma, dysplastic oral mucosa, invasive oral cancers, small cell and non-small cell lung carcinomas, hormone- dependent breast cancers, independent breast cancers, transitional and squamous cell cancers, neurological malignancies including neuroblastoma, gliomas, astrocytomas, osteosarcomas, soft tissue sarcomas, hemangioamas, endocrinological tumors, hematologic neoplasias including leukemias, lymphomas, and other myeloproliferative and lymphoproliferative diseases, carcinomas in situ, hyperplastic lesions, adenomas, f ⁇ bromas, histiocytosis, chronic inflammatory proliferative diseases, vascular proliferative diseases and virus-induced prolife
  • polypeptides and composition of the present invention can be used or diagnostic purposes in particular, if they are attached to a marker as defined above. Therefore, another aspect of the present inventions is the use of a polypeptide or composition of the present invention for the diagnosis of a disease and in particular of diseases selected from the group of proliferative diseases, immune diseases, in particular autoimmune diseases, infectious diseases, vascular diseases, rheumatoid diseases, inflammatory diseases and diseases associated with an increase or decrease of the expression of ⁇ 3 and/or ⁇ v ⁇ 5 integrin.
  • the detection of the marker in vitro in, for example, a biopsy of a patient or in vivo in a patient by, for example, tomographic methodologies will allow the detection of sites of neovascularization within a specimen or within a patient.
  • Fig. 1 Binding of carboxyfluorescein-labelled RGD- 10 to HUVECs. Thin line - cells without peptide, bold line - cells incubated with CF-labelled RGD- 10.
  • Fig. 2 Titration of inhibition of RGD-10 binding by peptides RGD-10 or RGD-4C analyzed by cell ELISA.
  • Fig. 3 Structure of lipopeptides consisting of a peptide ligand with an acetylated N- terminus, the doo spacer linked to a dipalmitoyl-glycero-succinyl-lysine anchor.
  • Fig. 6 Cell binding and internalization of RGD-10-LP3 liposomes. Fluorescence microscopy analysis of binding of RGD10-LP3 liposomes or liposomes lacking lipopeptide (untargeted liposomes) to HUVECs at 4°C or 37°C. While at 4°C a cell surface staining is observed for RGD10-LP3 liposomes, incubation at 37°C for 2 hrs resulted in a perinuclear accumulation of fluorescence indicative for internalization of the liposomes.
  • Fig. 7 Pharmacokinetic analysis of liposomes containing 1 mol% LP1, 1 mol% LP3, or 0.1 mol% LP3.
  • Fig. 8 Antitumor effects of LP3-liposomes (Dox-LP3 liposomes) loaded with doxorubicin in comparison to untargeted liposomes (Dox liposomes) or free doxorubicin analyzed in a C26 murine colon carcinoma tumor model.
  • CPL4b Two composed peptide libraries (CPL4b, CPL4c) containing a RGD motif flanked by cysteine residues were generated.
  • CPL4b differed from CPL4c by an Asp- Gly sequence at the C-terminus.
  • Peptides were selected on human dermal microvascular endothelial cells (HDMEC), a human melanoma cell line (Me Wo), or a mixture of murine melanoma cell lines B16.F1 and B16.F10.
  • RGD-4C (1) and RGD-4C(2) sequences are from Koivunen, et al. (1995) Bio/Technol. 13, 265-270. Except for two peptides selected on MeWo, all peptides were from the CPL4b library. The identified sequences can be divided into two groups. Peptides of group one (4C- RGD peptides) contain four cysteine residues either at positions 4, 6, 10, and 12 (peptides 1-5) or at positions 5, 6, 10 and 12 (peptide 6), with positions 6 and 10 corresponding to the fixed cysteine residues. Peptides 1-5 all contained a hydrophilic residue at position 5 (Q, E, H) and a hydrophobic residue at position 11 (L, F).
  • Peptides of group two (2C-RGD peptides) contain only the two fixed cysteine residues at position 6 and 10. 4 out 6 peptides have an arginine residue at position 4 and an aspartate or glutamate residue at position 12 (peptides 7-12). These peptides preferred an alanine residue at position 3 and a valine residue at position 11.
  • RGD-10 GARYCRGDCFDG 2C-RGD peptide
  • the RGD-10 peptide was synthesized with the sequence GARYCRGDCFDG, thus lacking the C-terminal aspartate residue and resulting in a neutral net charge.
  • Direct binding of RGD-10 to HUVEC was demonstrated with a synthetic carboxyfluorescein-labeled RGD-10 peptide (Fig. 1). RGD-10 peptide bound with comparable strength as RGD-4C to HDMEC.
  • RGD-4C was oxidized in a two-step process to obtain disulfide bonds between C1-C4 and C2-C3 described to be essential for high affinity binding (Assa- Munt, et al. (2001) Biochemistry 40: 2373-2378).
  • RGD-10 contains only 2 cysteine residues, which facilitates synthesis of oxidized peptides using a one-step oxidation reaction.
  • RGD-10 contains two aromatic residues, which allows spectrophotometrical detection at 280 nm.
  • Competition experiments with free RGD-10, RGD-4C, and a non-RGD control peptide showed that both RGD peptides bind to the same epitope as RGD-4C.
  • Liposomes had the following lipid composition: 35 mol% cholesterol, 32,1 mol% palmitoyl-oleoyl-phosphatidylcholine (POPC), 14,7 mol% dilauroyl- phosphatidylethanolamine (DLPE), 18.2 mol% milk derived SM.
  • the lipopeptideanchors were added at a molar ratio of 0.1 to 3 mol% reducing the concentration of lipids proportionally. All lipids were purchased from Avanti Polar Lipids (USA) and lipopeptides were synthesized by emc (Germany). Lipids and lipopeptides were used without further purification. Liposomes were prepared from dried lipid films by rehydration.
  • lipids and lipopeptides were dissolved in chloroform or chloroform/methanol (1:1) and mixed at the indicated ratios.
  • 0.03 mol% rhodamine-DPPE was added. Lipids were dried using a rotary evaporator and residual solvent was removed under high vacuum. Lipid films were then rehydrated with PBS pH 7.4 to a final lipid concentration of 10 ⁇ mol/ml. Liposomes were extruded 21 -times through 50 nm membranes. All lipopeptide- containing liposomes had an average size of 76 +/- 2 nm.
  • Example 6 Antitumor effects of doxorubicin-Ioaded RGD10 liposomes Based on the pharmacokinetic data we used RGD10-LP3 liposomes containing 0.1% lipopeptide for analysis of in vivo antitumor effects. For this purpose liposomes were loaded with doxorubicin and analyzed in a C26 colon carcinoma mouse model.
  • Doxorubicin was encapsulated into liposomes (see example 3 for composition) containing 0.1% lipopeptide. As control we included liposomes lacking RGD-10 lipopeptide. Lipid films were rehydrated with 300 mmol/1 citrat buffer pH 4.0. After extrusion the pH of the external aqueous solution was adjusted to pH 7.4 with NaOH. Liposomes were heated to 60°C and doxorubicin in PBS was added and incubated for 15 min. A drug to lipid ratio of 1:5 (w/w) was used in these experiments. Unencapsulated doxorubicin was removed by ultrafiltration using Vivaspin columns (centrifugation at 2800 rpm for 10 min). Encapsulation efficiency was determined by HPLC analysis of doxorubicin on a RP18 column and was found to be in the range of 70-90%.
  • doxorubicin-Ioaded liposomes injecting a doxorubicin dose of 4 mg/kg body weight at days 1, 3 and 6 after tumors had reached a size of approximately 50-100 mm .

Abstract

The present invention relates to novel RGD comprising polypeptides, compositions and complexes comprising them as well as their use.

Description

RGD TARGETING MOIETY ITS PRODUCTION AND USE
The present invention relates to novel RGD comprising polypeptides, compositions and complexes comprising them as well as their use, in particular for the therapy of proliferative diseases, immune diseases, infectious diseases, vascular diseases, rheumatoid diseases, diseases, in which cells in or adjacent to a disease site express αγβ3 and/or αyβs integrin and inflammatory diseases.
The delivery of drugs to only specific sites within the body is one central goal of targeted drug therapy. The concept depends on the differential expression of certain target structures only in a subpopulation of tissues or cell types of the body. Therefore, many groups have tried to elucidate differences in the expression of cell surface markers among different tissue types or between the healthy and diseased state of a tissue or cell. Targeted drug delivery is an attractive concept in particular for cancer chemotherapy, which usually administers highly toxic substances systemically. It is believed that targeted drug delivery to primarily to the tumor cells or at least primarily into the vicinity of the tumor cells would allow to either increase the amount of chemotherapeutic, which can be administered at the same level of systemic toxicity but with an increased effect at the tumor site, or to decrease the amount of chemotherapeutic, which is administered thus lowering the systemic toxicity while still eliciting the same effect at the tumor site.
Of many differentially expressed target structures identified so far, αγβ3 and αγβ5 integrins represent particular attractive target structures since they are upregulated in proliferating endothelial cells of the tumor vasculature. Targeting of the tumor vasculature, thus, represents a promising new approach for targeted cancer therapy (Matter (2001) Drug Discov. Today 6:1005-1024). Vascular targeting agents are designed to deliver cytotoxic, anti-angiogenic, procoagulant, or proapoptotic substances specifically to the vasculature of tumors. The employed ligands recognize structures associated with tumor blood vessels, i.e. proteins expressed by endothelial cells or associated with the extracellular matrix (Thorpe et al., (2003) Cancer Res. 63:1144- 1147; Halin et al. (2001) News Physiol. Sci. 16:191-194). Targeting of the vasculature has several advantages over targeting of tumor cells (Augustin (1998) Trends. Pharmacol. Sci. 19:216-222). There are no physiological barriers as endothelial cells are easily accessible to circulating carrier systems and penetration into the tumor is not necessary. Destruction of few capillary endothelial cells affects a large number of tumor cells depending on them. Since all solid tumors are dependend on neovascularization to grow beyond a few millimeters in diameter, this approach should be broadly applicable. Finally, endothelial cells are genetically stable and do not become resistant to the therapy due to mutation.
In addition αγβ3 and αγβ5 integrins are found on different tumor cells including metastatic melanoma cells (Conforti et al. (1992) Blood 80:437-446; Gehlsen et al.
(1992) Clin. Exp. Metastasis 10:111-120; Seftor et al. (1999) Cancer Metastasis Rev.
18:359-375 and Narner & Cheresh (1996) Curr. Opin. Cell. Biol. 8: 724-730; Νahde et al, (2001) J. Gene Med. 3: 353-361). Targeting to αγβ3 and αγβ5 integrins can be achieved by RGD-containing peptides, with a variety of linear and cyclic RGD- containing peptides (DeΝardo et al. (2000) Cancer Biother. Radiopharm. 15:71-79;
Pasqualini et al. (1997) Nat. Biotechn. 15:542-546). Several of these RGD-peptides have already been used to deliver radionuclide, proteins, cytotoxic drugs or viral and non viral carrier systems to integrin-expressing cells in vitro and in vivo (Arab et al.
(1998) Science 279:377- 380; Schraa et al. (2002) Int. J. Cancer 102:469-475; Jansen et al. (2002) Cancer Res. 62:6146-6151; Erbacher et al. (1999) Gene Ther. 6:138-145;
Mϋller et al. (2001) Cancer Gene Ther. 8:107-117 and Wicknam et al. (1997) J. Virol.
170:8221- 8229; Nahde et al, (2001) J. Gene Med. 3: 353-361).
One problem when designing RGD-comprising integrin binding peptides lies in a lack of conformational stability of the resulting peptides. This problem has been addressed, for example, in US 5,880,092 by cyclization of RGD-containing peptides sequences
(see also, for example, Koivunen, et al. (1995) Biotechnology 13:265 - 280, U.S.
5,880,092; US 5,981,468; US 6,020,460; US 5,906,975; US 5,985,827; US 5,827,821; and US 6,353,090). Other approaches for providing conformational stabile RGD- comprising integrin binding peptides involved the introduction of four cysteine residues which are oxidized in a step wise fashion to form two intermolecular bridges preferable in the 1 - 4 and 2 - 3 conformation as described by, for example, Assa-Munt et al.
(2001) Biochemistry 40:2373-2378. However, the generation of such stabilized peptides involves two separate oxidation steps, which is cumbersome. Thus, there is still a need in the art to identify novel RGD-comprising peptides, which exhibit high integrin binding affinity and or which are easy to produce in a stabilized form. To this end the present inventors have identified novel RGD-comprising peptides.
Therefore, in one aspect of the present invention a polypeptide is provided comprising at least one binding peptide having an amino acid sequence as indicated by the general formula (I) X1X2X3Y1Y2Y3Y4Y1X4X5X6 or by the general formula (II) X7X8X9Y1Y2Y3Y4Y1X10Y1X11, in which:
Yi is Cys
Y2 is Arg
Y3 is Gly
Y is Asp X] is Ala, Leu, Phe or Ser, in particular Ala or Leu;
X2 is Arg, Leu, Phe, Pro, or Ser, in particular Arg or Ser;
X3 is Ala, Gly, Leu, Ser, Tyr, or Nal, in particular Gly, Leu, or Tyr;
X4 is Gin, Phe, Ser, or Nal, in particular, Phe or Nal;
X5 is Arg, Asp, Glu, or Gin, in particular Asp or Gin; X6 is Ala, Gin, Glu, Gly, Phe, or Nal, in particular Ala, Gin or Gly;
X7 is Glu, Phe, Pro, or Nal, in particular Glu or Nal;
X8 is Ala or Cys, in particular Cys;
X9 is Asp, Cys, Gin, or His, in particular Gin;
X10 is Leu, Phe, or Nal, in particular Leu; and Xπ Gin, Phe, Pro, or Nal, in particular Pro,
wherein Xls X2, X3, X4, X5, X6, X7, X8, X9, Xio, Xu, Yi, Y2, Y3, Y4 are independently of each other the D or L amino acid or the amino acid residue mimetic of the respectively indicated amino acid;
or said amino acid sequence, which lacks 1 or 2, preferably 1, amino acid(s) from the Ν- terminus or C-terminus or 1 amino acid from the Ν- and C-terminus. Polypeptides according to formula I have a particular high binding affinity for αγβ3 and/or αγβ5 integrins, while polypeptides according to structure (II) have a high binding activity albeit they require only one oxidation step for stabilizing the RGD motive.
The term "amino acid residue mimetic" refers to a moiety, that conformationally and/or functionally serves as a substitute for a particular amino acid in a peptide compound without adversely interfering to a significant extent with the function of the peptide (e.g., interaction of the peptide with αγβ3 and/or αγβ5 integrins) and shall include pseudomimetics and secondary structure mimetics (as described in Peptides: Chemistry and Biology by Norbert Sewald (Author), Hans-Dieter Jakubke (Author), Publisher: Wiley-NCH). By substituting amino acids with their mimetics the peptide or polypeptide retains many of the biologically important structural features of its parent while possessing a reduced or modified peptidic character.
Amino acid residue mimetics do not necessarily have to make the same contacts as the amino acid they replace it is often sufficient if they do not alter the overall conformation in such that the function, e.g. the binding to αγβ3 and/or αγβ5 integrins, is not significantly affected. In some circumstances, substitution with an amino acid residue mimetic may actually enhance properties of the peptide (e.g., interaction of the peptide with αγβ3 and/or αγβ5 integrins or stability or oral uptake of the peptide). Amino acid residue mimetics for the amino acids making up the binding peptide of the polypeptide of the present invention are well known in the art and approaches to designing peptides including amino acid residue mimetic are also well known in the art. For example, see Farmer, P. S. in Drug Design (E. J. Ariens, ed.) Academic Press, New York, 1980, vol. 10, pp. 119-143; Ball. J. B. and Alewood, P. F. (1990) J. Mol. Recognition 3:55; Morgan, B. A. and Gainor, J. A. (1989) Ann. Rep. Med. Chem. 24:243-252; and Freidinger, R. M. (1989) Trends Pharmacol. Sci. 10:270; A. D. Abell (editor) Advances in peptidomimetics and amino acid mimics, JAI Press, USA, Volume 1, 1997.
The strength of the interaction of a polypeptide of the present invention comprising one or more amino acid residue mimetics can be determined by a wide variety of assays known in the art and which are suitable to determine the binding between two chemical entities and comprise without limitation the binding assays described in the examples as well as methods as ELISA and plasmon resonance. Polypeptides comprising one or more amino acid residue mimetics are still considered to show no significant decrease in binding if they posses at least 30%, preferably at least 50%, more preferably at least 75% and most preferably at least 100% of the binding strength of a polypeptide comprising a binding peptide entirely made up of L amino acids.
Particularly preferred amino acid residue mimetics for the amino acids making up the binding peptide comprise but are not limited to:
Ala: alanine substituted at the carbon or nitrogen residue with alkl, cycloalkyl or aryl;
Asp: aryl and alkyl esters of aspartic acid;
Cys: cy stein substituted at the sulfur atom with alkyl, alkenyl or phenyl optionally substituted with halo, cyano, nitro, haloalkyl, amino, aminoalkyl, dialkylamino, alkyl, alkoxy, haloalkoxy, carboxyl, carboalkoxy, alkylcarboxamide, arylcarboxamide, alkylthio or haloalkylthio;
Gin: glutamine substituted at the nitrogen atom with alkyl, alkenyl, alkynyl, alkoxyalkyl, alkylthioalkyl, alkylaminoalkyl, dialkylaminoalkyl, carboxyalkyl, alkoxycarbonyl alkyl or cycloalkyl, bicycloalkyl, cycloalkyl alkyl, bicycloalkyl alkyl or fused aryl- cycloalkyl alkyl optionally comprising 1 or more heteroatoms selected from N, O and S;
Glu: aryl and alkyl esters of glutamic acid;
Gly: glycine substituted at the carbon or nitrogen residue with alkl, cycloalkyl or aryl, in particular t-butyl glycine;
Leu: isoleucine;
Phe: homo-phenylalanine, dehydro-phenylalanine, indoline-2- carboxylic acid; tetrahydroisoquinoline-2-carboxylic acid optionally substituted with halo, cyano, nitro, haloalkyl, amino, aminoalkyl, dialkylarino, alkyl, alkoxy, haloalkoxy, carboxyl, carboalkoxy, alkylcarboxamide, arylcarboxamide, alkylthio or haloalkylthio; Ser: serine substituted with alkyl or aryl;
Tyr: tyrosine substituted with alkyl or aryl;
Val: norvaline or norleucine.
The term "polypeptide" as used in the present invention refers to a chain of naturally and/or non-naturally occurring amino acids , including for example D amino acids, linked via peptide bonds to each other. The length of the amino acid chain is not particular limited as long as it comprises at least the binding peptide having an amino acids sequence as specified above. Preferably the polypeptide still shows no significant decrease of the interaction with its target, e.g. αγβ3 and/or αγβ5 integrins as defined above.
In a preferred embodiment the polypeptide of the present invention comprises a least one binding peptide having an amino acids sequence as indicated by the general formula
(I) X1X2X3Y1Y2Y3Y4Y1X4X5X6 or by the general formula (II)
X7X8X9Y1Y2Y3Y4Y1X10Y1X11, in which Yt is Cys
Y2 is Arg
Y3 is Gly
Y4 is Asp
X] is Ala or Leu; X2 is Arg or Ser;
X3 is Gly, Leu or Tyr;
X4 is Phe or Val;
X5 is Asp or Gin;
X6 is Ala, Gin, or Gly; X7 is Glu or Val;
X8 is Cys;
X9 is Gin;
Xio is Leu; and
Xu is Pro, wherein X X2, X3, X_4, X5, X6, X7, X8, X9, Xι0, Xu, Yi, Y2, Y3, Y4 are independently of each other the D or L amino acid or the amino acid residue mimetic of the respectively indicated amino acid or said amino acid sequence, which lack 1 or 2, preferably 1, amino acid(s) from the N-terminus or C-terminus or 1 amino acid from the N- and C- terminus.
In an even more preferred embodiment the polypeptide of the present invention comprises at least one binding peptide with an amino acid sequence as indicated in SEQ ID NOs. l to l5.
In a further preferred embodiment the polypeptide of the present invention has a length of preferably 500, 450, 400, 350, 300, 250, 200, 100, 90, 80, 70, 60, 50, 40, 30, 20, 19, 18, 17, 16, 15, 14, 13, 12, 11, 10 or 9 amino acids. Particular preferred are polypeptides with a length of between about 10 to 20 amino acids.
In the further preferred embodiment the polypeptide of the present invention can comprise additional encoded proteins, which can be essentially any desired protein or protein fragment, however, in preferred embodiments of the invention the polypeptide comprising the binding peptide further comprises a protein selected from the group consisting of a cytokine, a chemokine, a growth factor, an adhesion molecule, an antibody light and/or heavy chain, a single chain antibody, a toxin, an enzyme, a receptor ligand, a lytic peptide, a membrane insertion sequence and a fluorescent protein or fragment thereof.
Such fusion polypeptides can provide an efficient way of recruiting the one or more additionally encoded protein or fragment thereof to cells expressing αγβ3 and/or αγβ5 integrins. In particular in cases in which a cytokine, a chemokine or a prodrug thereof or a toxin is delivered to a cell expressing one of the mentioned integrins a localized cytotoxic effect can be obtained.
In another preferred embodiment of the present invention the polypeptide is attached to at least one chemical moiety. The term "attached" as used through out this specification means a direct or indirect, covalent or non-covalent bond and connection, respectively, between a polypeptide of the present invention and another chemical entity. The term "chemical moiety" or "entity" as used interchangeably herein is not limited to a particular type of a chemical substances, however, in a preferred embodiment the chemical moiety is selected from the group consisting of a spacer, a marker, a tag, and a lipid and in particular a phospholipid, a drug, a capping group and a spacer attached to a second chemical moiety.
A "capping group" within the meaning of the present invention is a chemical moiety which protects the molecule to which it is attached from, for example, chemical or enzymatic degradation. The capping group or groups can be attached directly to the polypeptide of the present invention or to any other chemical moiety, which is itself attached to the polypeptide of the present invention. In certain preferred aspects of the present invention in which the N- and/ or C-terminus of the polypeptide of the present invention is not attached to another chemical moiety like, for example, a spacer and would otherwise be in its "free" form, i.e. -COOH and/or -NH2, a capping group is attached to one or both ends to avoid or minimize degradation by, for example, exoproteinases or the like.
The capping groups of the present invention have in a preferred embodiment one of the following structures: R A
Figure imgf000009_0001
Wherein A is an amino acid or an amino acid residue mimetic of the polypeptide of the present invention or any other chemical moiety attached to the polypeptide of the present invention and R and R' each independently have the meaning: -C(O)Rι, - C(O)NHRb -S(O)2Rl, -C(O)ORh CRi or Rh wherein Ri can have the meaning H; linear or branched alkyl, in particular lower alkyl (Ci, C2, C3, C4, and C5, e.g. methyl, ethyl, n-propyl, isopropyl, n-butyl, isobutyl, tert- butyl, n-pentyl or iso-pentyl); substituted linear or branched alkyl, in particular lower substituted alkyl; linear or branched alkenyl, in particular lower alkenyl (C2, C3, C4 and C5j, e.g. ethenyl, 1-propenyl, 2-propenyl, iso-propenyl, 1-butenyl, 2-butenyl, 3-butenyl; substituted linear or branched alkenyl, in particular lower substituted alkenyl; linear or branched alkynyl, in particular lower alkynyl (C2, C3, C4 and C5); substituted linear or branched alkynyl, in particular lower substituted alkynyl; linear or branched alkanol, in particular lower alkanol (Ci, C2, C3, C4, and C5); linear or branched alkanal, in particular lower alkanal (Ci, C2, C3, C4, and C5, e.g. COH, CH2COH, CH2CH2COH; aryl, in particular phenyl; substituted aryl, in particular substituted aryl; haloalkyl, in particular lower haloalkyl (Ci, C2, C3, C , and C5); haloalkoxy, in particular lower haloalkoxy (Ci, C2, C3, C , and C5); heteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; substituted heteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; aryl, in particular C5 to 2); alkylaryl, in particular C5 to Cι2, e.g. benzyl, isoquinolinyl, quinolinyl, naphthyl; substituted alkylaryl, in particular C5 to Cι2, e.g. substituted benzyl; alkylheteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S optionally comprising 1 to 4 heteroatoms selected from N, O, S; substituted alkylheteroaryl optionally comprising 1 to 4 heteroatoms selected from N, O, S; aminoalkyl, in particular Ci, C2, C3, C4 and C5, e.g. -NHCH3, -NHCH2CH3, - N(CH3)2; substituted aminoalkyl; dialkylamino; aminoketone, in particular -NHCOCH3; substituted aminoketone; aminoaryl, in particular -NH-Ph; substituted aminoaryl, in particular substituted -NH-Ph; carboxyl, carboalkoxy; alkylcarboxamide; cycloalkyl; alkylcycloalkyl; CN; NH2; Halogen, in particular F, Cl, and Br; if the residues mentioned above are substituted they are preferably mono, di, or tri substituted with a substituent selected from the group of halogen, in particular F, Cl, and Br, NH2, NO2, OH, SH, NH, CN, aryl, alkylaryl, heteroaryl, akylheteroaryl, COH or COOH;
R and R' form a ring comprising 5-7 atoms selected from C, N, S and O; or
R and R' are independently toluenesulfonyl, methanesulfonyl, FMOC or (+)- menthyloxy-CO-.
The term "spacer" refers to a chemical moiety, which serves the purpose of providing the accessibility of the binding peptide even when attached to other chemical moieties which might otherwise sterically hinder the binding of the polypeptides of the present invention to its target structures. Spacer within the meaning of the present invention are a linear extension of at least 0.5 nm preferably the spacer has a linear extension of between 1 and 10 nm and even more preferably between 2 and 5 nm. The spacer is preferably a linear or branched saturated or unsaturated carbohydrate chain. The carbohydrate chain preferably comprises multimeric repeats of a monomeric building block. Depending on the length of the respective monomeric building block between 2 and 10 multimeric repeats of the monomeric building blocks are preferred. In preferred embodiments the spacer is hydrophilic. The spacer can comprise a functional group which allows attachment to the polypeptides of the present invention on one terminus and another functional group on the other terminus, which allows attachment of the spacer to another chemical moiety.
Preferred spacers are bifunctional molecules in particular bifunctional polyethylene or polypropylene glycol derivatives comprising preferably between about 1 and 40 repeat units, oligopeptides comprising natural and/or synthetic amino acids and preferably between 1 to 40 preferably 2 to 20 and more preferably 2 to 10 amino acids. A particular preferred building block of a spacer of the present invention is 8-amino-3, 6- dioxatanoic acid (doo) and spacers comprising between 1 to 10 repeat units of doo are preferred. Spacers comprising between 2 and 5 doo units being more preferred and spacers comprising 3 doo units being most preferred. In the context of liposomes it has been discovered that there is an optimal length of the spacer, which is between 2 and 5 nm. While spacers with a length of less than 0.5 nm will in most cases not provide enough distance from, for example, the liposomal surface to which the polypeptides of the present invention has been attached to allow efficient interaction, i. e. binding, between the binding peptides of the present invention and integrin bearing cells. On the other hand spacers, which are longer than 10 nm show an increasing "floppiness" which is also detrimental to the binding to cells.
The term "marker" refers to a chemical moiety which is directly or indirectly detectable by analytical methods including measurement of fluorescence, nuclear magnetic resonance, computer tomography or scintigrams and comprises without limitation electron dense molecules, paramagnetic molecules, superparamagnetic molecules, radioactive molecules like, for example, 13N, 15O, 18F, 51Gr, 54Fe, 60Co, 67Ga, 75Se, 9 raTc, mIn, 112mAg, 113mIn, 123L 133Xe, 148Au, 35S, 33P, 32P, or πC, non-radioactive isotopes, which include, for example, H and C, and fluorescent molecules or molecules generating fluorescence or light emission like, for example, green fluorescent protein, luciferase, and a variety of fluorescent dies all of which are well known to someone of skill in the art. The term "tag" refers to chemical moieties, which allow purification of the polypeptides or complexes comprising the polypeptides of the present invention like, for example, biotin, Chitin-tag, Myc-tag, His-tag or the like, which are all well known in the art.
In a preferred embodiment the polypeptide of the present invention is attached directly or indirectly to a lipid. The type of lipid to which the polypeptide can be attached is not particular limited. However, in preferred embodiments the respective lipid can be inserted or incorporated into lipid-based carriers like, for example, liposomes or virosomes. Particularly suitable lipids are glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphonolipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroids, stearines, steroles, and/or carbohydrate containing lipids. Particularly preferred lipids for the attachment of the polypeptides of the present invention are phospholipids preferably phosphatidylcholine (PC), phosphatidylserine (PS), and phosphatidylethanolamine (PE), in particular distearoylphosphatidyl (DSPE) or alpha-(dipalmitoylphosphatidyl (DPP)) which are often included in liposomes used for delivery of drugs.
In another embodiment the lipid attached to the polypeptide of the present invention is selected from the group consisting of N-caproylamine-PE, N-dodecanylamine-PE, phophatidylthioethanol, N- [4-(p-maleimidomethyl)cyclohexane-carboxamide-PE (N- MCC-PE), N-[4-(p-maleimidophenyl)butyramide]-PE (N-MPB), N-[3-(2- pyridyldithio)propionate]-PE (N-PDP), N-succinyl-PE, N-glutaryl-PE, N-dodecanyl-PE, N-biotinyl-PE, N-biotinyl-cap-PE, phosphatidyl-(ehtylene glycol), PE-polyethylene glycol (PEG)-carboxylic acid, PE-PEG-maleimide, PE-PEG-PDP, PE-PEG-amine, PE- PEG-biotin, PE-PEG-HNS, dipalmitoyl-glycerosuccinyl-lysine, alpha-methoxy-omega- (1,2-dioctadecenoyloxy glyceryl) (DO), alpa-methoxy-omega-(l,2-ditetradecenoyloxy glyceryl) (DT).
In a further preferred embodiment the polypeptide of the present invention is attached to at least one drug. The term "drug" encompasses any therapeutically active compound and in particular compounds are selected from the group consisting of immunosuppressants, immunostimulants, antibiotics, antiinfectives, antiallergics, cytostatics, cytotoxic agents and prodrugs thereof, mitogens, chemokines, cytokines, dermatics and/or physiological or pharmacological inhibitors of mitogens, chemokines or cytokines. In preferred embodiments the drug is attached to the polypeptide of the present invention in such a way that it is releasable and preferably the release of the drug is primarily effected in the tissues or areas of the body to which the polypeptide of the present invention binds i. e. primarily in tumor endothelium or tumors. Particularly preferred means of attachment of the drug are short polypeptide stretches which are cleavable, for example, by enzymes which are released at the target site. Thus, preferably the drugs are released in the tumor endothelium or in tumors. Enzymes of this type include, for example metalloproteinases. Such releasable connections are known in the art and can be selected to provide a further specificity on top of the specificity already achieved by the target specific binding of the polypeptides of the present invention. The inclusion of such a cleavage site is particularly desirable, in cases in which a drug attached to the polypeptides of the present invention exerts a cytotoxic and/or growth inhibitory effect on cells once it is released.
In a preferred embodiment of the present invention using above described spacer the spacer is attached at one side to the polypeptide of the present invention and on the other side to a second chemical moiety. Preferably the second chemical moiety is selected from the group consisting of a drug, a marker, a tag and a lipid. In this context the terms "drug", "marker", "tag", and "lipid", have the meaning and preferred meanings as outlined above.
A further aspect of the present invention is a polynucleotide encoding at least one polypeptide of the present invention comprising a binding peptide which has an amino acid sequence as outlined above. The nucleic acid molecules of the invention can be DNA, cDNA, genomic DNA, synthetic DNA or RNA and can be double-stranded or single-stranded, the sense and/or antisense strand. The polynucleotide molecules of the invention can contain any sequence which due to the degeneracy of the genetic code, encode a polypeptide comprising a binding peptide having an amino acid sequence as outlined above and preferably one of the amino acid sequences indicated in SEQ ID NOs. 1-15. In addition the nucleic acid molecules of the present invention are not limited to coding sequences, e.g. they can include none-coding sequence that can be located upstream or downstream from a sequence encoding the polypeptides of the present invention. The polynucleotide molecules of the invention can be synthesized in vitro, for example, by phosphoramidite-based synthesis or can be obtained from a cell such as a bacterial cell, or mammalian cell.
A further aspect of the present invention is a vector containing the polynucleotide of the present invention. The term "vector" as used herein refers to a means for introducing the polynucleotides of the present invention into cells in particular for maintenance and propagation. In preferred embodiments the vector of the present invention comprises plasmids, phagemids, phages, cosmids, artificial mammalian or yeast chromosomes, knock-out or knock-in constructs, viruses in particular adeno-viruses, vaccinia-viruses, attenuated vaccinia-viruses, canary pox viruses, lentiviruses (Chang, L. J. Gay, E. E. (2001) Curr. Gene Therap. 1: 237-251), Herpes viruses in particular Herpes simplex virus (HSV-1) (Carlezon, W. A. et al. (2000) Crit. Rev. NeurobioL), baculovirus, retrovirus, adeno-associated virus (AAV; Carter, P. J. and Samulski, R. J. (2000) J. Mol. Med. 6: 17-27), rhinovirus, human immune deficiency virus (HIV), Filovirus and engineered versions thereof (see, for example, Cobinger G. P. et al. (2001) Nat. Biotechnol. 19: 225-230), virosomes, "naked" DNA, liposomes and nucleic acid coated particles, in particular gold spheres. Particular preferred are viral vectors like adeno- viral vectors or retro-viral vectors (Lindemann et al. (1997) Mol. Med. 3: 466 - 476 and Springer et al. (1998) Mol. Cell. 2: 549 - 258). Liposomes are in general small unilamellar or multilamellar vesicles made of cationic, neutral and/or anionic lipids, for example, by ultrasound treatment of lipid suspensions. The DNA can, for example, be ionically bound to the surface of the liposome or internally enclosed in the liposome. Suitable lipid mixtures are known in the art and comprise for example DOTMA (1, 2- dioleyloxypropyl-trimethylamoniumbromid) and DPOE (dioleylphosphatidyl- ethanolamine) which both have been use for transfection or transduction of a variety of cell lines.
Nucleic acid coated particles are another means for the introduction of nucleic acids into cells using so called "gene-guns" which allow the mechanical introduction of particles into the cells. Preferably, the particles itself are inert and, therefore, are in a preferred embodiment made out of gold spheres.
In a further aspect the polynucleotide of the present invention is operatively linked to one or more expression control sequences allowing expression in prokaryotic and/or eukaryotic host cells. The "expression control sequences" are preferably transcriptional/translational regulatory elements, which include but are not limited to inducible and non-inducible, constitutive, cell cycle regulated, metabolically regulated promoters, enhances, operators, silencers, repressors and other elements that are known to those skilled in the art and that drive or otherwise regulate gene expression. Examples of regulatory elements directing constitutive expression include, promoters transcribed by RNA polymerase III like, e.g., promoters for the snRNA U6 or scRNA 7SK gene; viral promoter and activator sequences derived from, e.g., NBV, HCN, HSN, HPN, EBV, HTLV, CMV, SV40, MMTV or HIV, in particular the cytomegalovirus hCMV immediate early gene, the early or late promoters of SV40 adenovirus directing inducible expression like, for example, CUP-1 promoter, the tet-repressor as employed, for example, in the tet-on or tet-off systems, the lac system, the trp_ system; tissue specific expression elements; cell cycle specific expression elements like, for example, cdc2, cdc25C or cyclin A; or the TAC system, the TRC system, the major operator and promoter regions of phage A, the control regions of fd coat protein, the promoter for 3- phosphoglycerate kinase, the promoters of acid phosphatase, and the promoters of the yeast α- or a-mating factors.
As used herein, "operatively linked" means incorporated into a genetic construct so that expression control sequences effectively control expression and/or translation of a coding sequence of interest.
Another aspect of the present invention is a host cell genetically engineered with the polynucleotide or the vector as outlined above. The host cells that may be used for purposes of the invention include but are not limited to prokaryotic cells such as bacteria (for example, E. coli and B. subtilis), which can be transformed with, for example, recombinant bacteriophage DΝA, plasmid DΝA, or cosmid DΝA expression vectors containing the polynucleotide molecules of the invention; simple eukaryotic cells like yeast (for example, Saccharomyces and Pichia), which can be transformed with, for example, recombinant yeast expression vectors containing the polynucleotide molecule of the invention; insect cell systems like, for example, Sf9 of Hi5 cells, which can be infected with, for example, recombinant virus expression vectors (for example, baculovirus) containing the polynucleotide molecules of the invention; Xenopus oocytes, which can be injected with, for example, plasmids; plant cell systems, which can be infected with, for example, recombinant virus expression vectors (for example, cauliflower mosaic virus (CaMV) or tobacco mosaic virus (TMN)) or transformed with recombinant plasmid expression vectors (for example, Ti plasmid) containing polynucleotide molecules of the invention; or mammalian cell systems (for example, COS, CHO, BHK, HEK293, NERO, HeLa, MDCK, Wi38, and ΝIH 3T3 cells), which can be transformed with recombinant expression constructs containing, for example, promoters derived, for example, from the genome of mammalian cells (for example, the metallothionein promoter), from mammalian viruses (for example, the adenovirus late promoter and the vaccinia virus 7.5K promoter) or from bacterial cells (for example, the tet-repressor binding its employed in the tet-on and tet-off systems). Also useful as host cells are primary or secondary cells obtained directly from a mammal and transfected with a plasmid vector or infected with a viral vector. Depending on the host cell and the respective vector used to introduce the polynucleotide of the invention the polynucleotide can integrate, for example, into the chromosome or the mitochondrial DΝA or can be maintained extrachromosomally like, for example, episomally or can be only transiently comprised in the cells.
A further aspect of the present invention is a transgenic non-human animal containing a polynucleotide, a vector and/or a host cell as described above. The animal can be a mosaic animal, which means that only part of the cells making up the body comprise polynucleotides, vectors, and/or cells of the present invention or the animal can be a transgenic animal which means that all cells of the animal comprise the polynucleotides and/or vectors of the present invention or are derived from a cell of the present invention. Mosaic or transgenic animals can be either homo- or heterozygous with respect to the polynucleotides of the present invention contained in the cell. The animals can in principal be any animal, preferably, however, it is a mammal, selected from the group of non-human primate, horse, bovine, sheep, goat, pig, dog, cat, rabbit, mouse, rat, guinea pig, hamster, or gerbil.
The polypeptides of the invention comprising binding peptides can be used directly as a therapeutic or in combination with additional substances and, therefore, the present invention in a further aspect relates to a composition comprising at least one polypeptide of the present invention and at least one further component selected from the group consisting of liposomes, virosomes, microsphere, niosomes, dendrimeres, stabilizers, buffers, excipient, additives.
Liposomes are single or multilamellar lipid vesicles of varying size. The size is preferable between 10 and 1000 nm and more preferably between 50 and 500 nm and most preferably between 80 and 200 nm. Virosomes are liposomes with a lipid composition closely resembling the lipid composition of viruses and which in preferred embodiments have proteins integrated into the membrane (Kaneda (2000) Adv. Drug. Deliv. Rev. 43:197-205). Microspheres are spherical particle with large size (up to 2 mm) and rigid morphology containing a core substance (Ravi & Kumar (2000) J. Pharm. Sci. 3:234-258). Niosomes are non-ionic surfactant vesicles (Baillie et al. (1985) J. Pharm. Pharmacol. 37:863-868). Dendrimers are synthetic, highly branched, mono- disperse macromolecules of nanometer dimensions (Patri et al. (2002) Curr. Opin. Chem. Biol. 6:466-471). Buffers comprised in the composition of the present invention can be any physiological buffer substances including, for example phosphate buffer or Hepes.
Excipients which facilitate production and administration of the compositions of the present invention are the art known excipients and include, for example, alginates, calcium carbonate, dextrose, fructose, lactose, maltose, maltodextrin, and the like. Stabilizers are also known in the art and comprise, for example, α-tocopherol and various carbohydrates.
In a preferred embodiment of the compositions of the present invention the polypeptide is integrated into or attached to a liposome, virosome, microsphere, niosome or dendrimer, which allows the respective entity to be target to sites and tissues in the body expressing αγβ3 and/or αγβ5 integrins. Polypeptides can be attached to one of the components, which are used for the generation of liposomes, virosomes, microsphere, niosomes, or dendrimers prior, during or after formation of the respective structure. In particular for liposomes and virosomes it is envisioned that polypeptides of the present invention which are linked to a lipid either with or without an intervening spacer as defined above are integrated into the lipid mono or multilayer of the liposome or virosome. In preferred embodiments the polypeptide is primarily comprised on the outer surface of the respective liposome or virosome to allow interaction of the polypeptides of the present invention with their targets preferably upon administration of the composition of the present invention to a patient. In preferred embodiments the polypeptide of the present invention will be attached to between about 0,1 mol% to about 10 mol% of all components which are used for the generation of the respective structure. This ranges are particular preferred for liposomes and virosomes.
In preferred embodiments the liposomes or virosomes of the present invention comprise lipids selected from the group consisting of glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphonolipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroid, stearines, steroles, and carbohydrate containing lipids. In preferred embodiments the liposome or virosome comprises cholesterol (CH) and sphingomyelin (SM). More preferably cholesterol is comprised in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of about 40 to about 60 mol% and more preferably of about 45 to about 55 mol% and most preferably of about 48 to about 52 mol%. SM on the other hand is preferably present in relation to the total molar lipid composition of the liposome at a molar ratio of about 10 to about 20 mol% and more preferably of about 11 to 18 mol% and most preferably of about 12 to about 16 mol%. In a particular preferred embodiment the liposome or virosome comprises in relation to the total molar lipid composition CH and SM at a molar ration of about 40 to about 60 mol% and of about 10 to about 20 mol%, respectively, and even more preferred at a molar ratio of about 45 to about 55 mol% and of about 11 to about 18 mol%, respectively and most preferably of about 48 to about 52 mol% and of about 12 to about 16 mol%, respectively.
The liposomes or virosomes which are comprised in the composition to the present invention contain (a) further lipid(s). This(These) is(are) preferably selected from the above indicated preferred lipids. In preferred embodiments at least one of the additional lipids is selected from PE and PC. In a particular preferred embodiment PE is present in the liposome or virosome of the present invention and in particular, if CH and SM are also present in the liposome or virosome. Preferably CH and SM are present together with PE in the above indicated preferred and particularly preferred ranges. PE itself is present in preferred embodiments in relation to the total molar lipid composition of about 5 to about 25 mol%, preferably about 10 to about 20 mol% and most preferably about 12 to about 18 mol%. Again in particular preferred embodiments CH, SM, and PE are present in above indicated preferred or particular preferred ranges.
In a further embodiment the additional lipids comprise PE and PC and in a preferred embodiment PE and PC are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of about 5 to about 25 mol% and about 15 to about 40 mol%, respectively. The above ranges for PE are PC particular preferred, if the molar ratio of CH and SM are as indicated above.
In a further embodiment any of the components making up the membrane of the liposomes of the present invention can be attached to a further chemical moiety. The term chemical moiety is not particular limited. However, in preferred embodiments the chemical moiety is a targeting moiety as discussed in more detail below or a stabilizing moiety. Stabilizing moieties within the meaning of this invention increase the circulation time of the liposome once it is administered. Particular preferred stabilizing moieties are ganglioside GM1, phosphatidylinositol or PEG, particular preferred PEGs have a molecular mass between about 1,000 and about 10,000 g/mol, more preferably about 5,000 g/mol.
In a preferred embodiment the chemical moieties in particular the stabilizing moieties are attached to only a fraction of the molecules making up the membrane of the liposomes. It is preferred that between about 1 to about 20 mol% of the components of the liposomal membrane carry an attached chemical moiety, more preferably between about 3 and about 10 mol% and even more preferably about 5 mol%.
A preferred liposomal component for attachment of the chemical moiety, in particular for the stabilizing moiety is a lipid component. While different chemical moieties can be attached to different lipid components it is preferred that the chemical moiety(ies) is(are) attached to one or more of the phospholipids comprised within the liposome of the present invention. In a further preferred embodiment the one or more chemical moiety is attached to PE. In particular, if a stabilizing agent like, for example, PEG is used PE is used for attachment.
In addition to the attachment of stabilizing moieties detergents, proteins and peptides can be incorporated into the liposome for stabilizing the lipid bilayers of the liposomes of the present invention. Detergents which can be used as bilayer stabilizing components include, but are not limited to, Triton X-100, deoxycholate, octylglucoside and lyso-phosphatidylcholine. Proteins which can be used as bilayer stabilizing components include, but are not limited to, glycophorin and cytochrome oxidase. In preferred embodiments a liposome can comprise between 0.05 and 15 mol% of a stabilizing agent.
To exert a therapeutic effect the composition of the present invention can further comprise a drug. Preferably this drug is connected or attached directly or indirectly with a polypeptide of the present invention or comprised or attached to the liposomes, virosomes, microspheres, etc.
If a drug or diagnostic is comprised within a liposome it is particularly preferred that the drug or diagnostic is comprised in the interior of the liposome or in cases of lipophilic drugs also within or between the lipid bilayers. In preferred embodiments the drug is comprised within the liposome, virosome, microsome or niosome. A variety of methods are available in the prior art to "load" a liposome, virosome, microsome or niosome with a given drug or diagnostic. In its simplest form the drug and/or diagnostic is/are admixed with the lipid components during formation of the liposomes. Other passive loading methods include dehydration-rehydration (Kirby & Gregoriadis (1984)
Biotechnology 2:979), revers-phase evaporation (Szoka & Papahadjopoulos (1978)
Proc. NatLAcad. Sci. USA 75:4194-), or detergent-depeletion (Milsmann et al. (1978)
Biochim. Biophys. Acta 512:147-155). However, these techniques often lead to a substantial loss of drug during loading, which is a particular disadvantage in cases where the drug is expensive.
Other methodologies for encapsulating drugs and/or diagnostics include so called "remote loading" or "active loading" in which due to a gradient, for example, a pH or salt gradient between the exterior and the interior of a preformed liposome the drug and/or diagnostic is transported into the liposome along the gradient (see, for example Cheung et al. (1998) Biochim. Biophys. Acta 1414:205-216; Cullis et al. (1991) Trends Biotechnol. 9:268-272; Mayer et al. (1986) Chem. Phys. Lipids 40:333-345). The passive and active loading techniques referred to above and other methods well known in the art can all without limitation employed by the skilled artisan. The most efficient method of loading for any given drug or diagnostic can be determined by routine experimentations by well established procedures. Variables which are typically adjusted are pH, temperature, salt type and concentration, type of buffer etc.
In a preferred embodiment the drugs and/or diagnostics are loaded by remote loading into the liposomes, virosomes, microsomes or niosomes, since this method offers a very low loss of the substance to be loaded. In a preferred embodiment a pH gradient is used for loading. Depending on the substance to be loaded the interior of the liposome will typically be acidified with respect to its exterior. Preferably the interior will have a pH between 1 and 6 prior to loading with the drug or diagnostic.
Particularly preferred drugs are selected from the group consisting of analgesics, antirheumatics, anthelminthics, antiallergics, antianemics, antiarrhythmics, antibiotics, angiogenesis inhibitors, antiinfectives, antidemenics (nootropics), antidiabetics, antidotes, antiemetics, antivertiginosics,, antiepileptics, antihemorrhagics, antihypertonics, antihypotonics, anticoagulants, antimycotics, antitussiv agents, antiviral agents, beta-receptor and calcium channel antagonists, broncholytic and antiastmatic agent, chemokines, cytokines, mitogens, cytostatics, cytotoxic agents and prodrugs thereof, dermatics, hypnotics and sedatives, immunosuppressants, immunostimulants, peptide or protein drugs, in particular hormones and physiological or pharmacological inhibitors of mitogens, chemokines, or cytokines or their respective prodrugs. Of course it is also envisioned that a liposome of the invention comprises more than one drug at once. Numerous drugs for each category are known to the skilled artisan and are all included without limitation.
Since αγβ3 and αγβ5 integrins are primarily found on growing endothelial and in particular on tumor endothelial cells the polypeptide of the present invention allow the specific targeting of drugs, which can interfere with tumor growth and/or progression of the disease in a targeted manner, therefore, the composition of the present invention are particular suitable for treatment of hyperproliferative diseases associated with neovascularization. Consequently, particular preferred drugs are cytostatics and cytotoxic drugs. A large variety of such drugs are known in the art. Particular preferred cytostatics and cytotoxic drugs are selected from the group consisting of alkylating substances, anti-metabolites, antibiotics, epothilones, nuclear receptor agonists and antagonists, anti-androgenes, anti-estrogens, platinum compounds, hormones and antihormones, interferons and inhibitors of cell cycle-dependent protein kinases (CDKs), inhibitors of cyclooxygenases and/or lipoxygenases, biogeneic fatty acids and fatty acid derivatives, including prostanoids and leukotrienes, inhibitors of protein kinases, inhibitors of protein phosphatases, inhibitors of lipid kinases, platinum coordination complexes, ethyleneimenes, methylmelamines, trazines, vinca alkaloids, pyrimidine analogs, purine analogs, alkylsulfonates, folic acid analogs, anthracendiones, substituted urea, methylhydrazin derivatives, in particular acediasulfone, aclarubicine, ambazone, aminoglutethimide, L-asparaginase, azathioprine, bleomycin, busulfan, calcium folinate, carboplatin, carpecitabine, carmustine, celecoxib, chlorambucil, cis- platin, cladribine, cyclophosphamide, cytarabine, dacarbazine, dactinomycin dapsone, daunorubicin, dibrompropamidine, diethylstilbestrole, docetaxel, doxorubicin, enediynes, epirubicin, epothilone B, epothilone D, estramucin phosphate, estrogen, ethinylestradiole, etoposide, flavopiridol, floxuridine, fludarabine, fluorouracil, fluoxymesterone, flutamide fosfestrol, furazolidone, gemcitabine, gonadotropin releasing hormone analog, hexamethylmelamine, hydroxycarbamide, hydroxymethylnitrofurantoin, hydroxyprogesteronecaproat, hydroxyurea, idarubicin, idoxuridine, ifosfamide, interferon α, irinotecan, leuprolide, lomustine, lurtotecan, mafenide sulfate olamide, mechlorethamine, medroxyprogesterone acetate, megastrolacetate, melphalan, mepacrine, mercaptopurine, methotrexate, metronidazole, mitomycin C, mitopodozide, mitotane, mitoxantrone, mithramycin, nalidixic acid, nifuratel, nifuroxazide, nifuralazine, nifurtimox, nimustine, ninorazole, nitrofurantoin, nitrogen mustards, oleomucin, oxolinic acid, pentamidine, pentostatin, phenazopyridine, phthalylsulfathiazole, pipobroman, prednimustine, prednisone, preussin, procarbazine, pyrimethamine, raltitrexed, rapamycin, rofecoxib, rosiglitazone, salazosulfapyridine, scriflavinium chloride, semustine streptozocine, sulfacarbamide, sulfacetamide, sulfachlopyridazine, sulfadiazine, sulfadicramide, sulfadime hoxine, sulfaethidole, sulfafurazole, sulfaguanidine, sulfaguanole, sulfamethizole, sulfamefhoxazole, co- trimoxazole, sulfamethoxydiazine, sulfamethoxypyridazine, sulfamoxole, sulfanilamide, sulfaperin, sulfaphenazole, sulfathiazole, sulfisomidine, staurosporin, tamoxifen, taxol, teniposide, tertiposide, testolactone, testosteronpropionate, thioguanine, thiotepa, tinidazole, topotecan, triaziquone, treosulfan, trimethoprim, trofosfamide, UCN-01, vinblastine, vincristine, vindesine, vinblastine, vinorelbine, and zorubicin, or their respective derivatives or analogs thereof. Several of the above indicated drugs are now administered simultaneously for cancer therapy and, consequently, it is also envisioned that more than one cytostatic and/or cytotoxic drug is comprised in a liposome of the present invention.
In another aspect the liposomes of the present invention can comprise anti-angiogenic drugs like, for example, fumagillin analogs, thalidomide, 2-methoxyestradiol, protein tyrosine kinase inhibitors. Such drugs are preferred for the treatment of diseases involving activated and/or proliferating endothelial cells For the treatment of diseases involving activated and/or proliferating endothelial cells, however, it is also possible to use cytostatic or cytotoxic drugs in particular those, which are indicated as preferred cytostatic or cytotoxic drugs above.
The term "immunosuppressant" comprises both substances which lower the activity of immune response as well as substances with an anti-inflammatory action, preferred examples are glucocorticoids, in particular beclomethasone, betamethasone, clocortolone, cloprednol, cortisone, dexamethasone, fludrocortisone, fludroxycortide, flumetasone, fluocinolone acetonide, fluocinonide, fluocortolone, fluorometholone, fluprednidene acetate, hydrocortisone, paramethasone, prednisolone, prednisone, prednylidene, pregnenolone, triamcinolone or triamcinolone acetonide, a cyclosporin, in particular cyclosporin A, mycophenolate mofetil, tacrolimus, rapamycin, FK 506, cycloheximide-N-(ethyl ethanoate), azathioprine, ganciclovir, an anti-lymphocyte globulin, ascomycin, myriocin, a pharmacological inhibitor of MAP kinases (especially a p38 inhibitor such as VX-745), caspase inhibitors, matrix metalloproteinase inhibitors, and/or methotrexate.
The term "immunostimulant" encompasses all substances, which influence the function of cells which are involved directly or indirectly in mediation of the immune response, and where the influence leads to an immune response. These cells include, for example, macrophages, Langerhans cells and other dendritic cells, lymphocytes, indeterminate cells, but also cells which do not themselves belong to the immune system but are involved in immune disorders of the skin, such as fibroblasts, keratinocytes and melanocytes, but especially Langerhans cells. The strength of the immune response can be determined for example through the amount of cytokines produced (such as interferon-gamma), detection of activation markers on dendritic cells (such as MHCII or CD86) or the number of activated CD8-positive T cells in the skin. Immunostimulants for the purpose of the present invention are, in particular, plant immunostimulants which are obtained, for example, from Echinacea pallida or Echinacea purpurea, cytokines such as, for example, interleukins, interferons and colony-stimulating factors, and bacterial constituents or molecules which mimic the latter [such as bacterial DNA and unmethylated oligodeoxynucleotides with CpG sequences, and constituents of the bacterial cell wall or coat, especially the lipopolysaccharides and molecules derived therefrom, such as monophosphoryl-lipid A, muramyldipeptide (N-acetylmuramyl-L- alanyl-D-isoglutamine), and/or PamCys3, and other molecules such as tetanus toxoid, poly-L-arginine or MHCII peptides].
The term "antibiotics" encompasses, for example, penicillins, cephalosporins, tetracyclines, aminoglycosides, macrolide antibiotics, lincosamides, gyrase inhibitors, sulfonamides, trimethoprim, polypeptide antibiotics, nitroimidazole derivatives, amphenicol, in particular actinomycin, alamethicin, alexidine, 6-aminopenicillanic acid, amoxicillin, amphotericin, ampicillin, anisomycin, antiamoebin, antimycin, aphidicolin, azidamfenicol, azidocillin, bacitracin, beclomethasone, benzathine, benzylpenicillin, bleomycin, bleomycin sulfate, calcium ionophore A23187, capreomycin, carbenicillin, cefacetrile, cefaclor, cefamandole nafate, cefazolin, cefalexin, cefaloglycin, cefaloridine, cefalotin, cefapirin, cefazolin, cefoperazone, ceftriaxone, cefuroxime, cephalexin, cephaloglycin, cephalothin, cephapirin, cerulenin, chloramphenicol, chlortetracycline, chloramphenicol diacetate, ciclacillin, clindamycin, chlormadinone acetate, chlorpheniramine, chromomycin A3, cinnarizine, ciprofloxacin, clotrimazole, cloxacillin, colistine methanesulfonate, cycloserine, deacetylanisomycin, demeclocycline, 4,4'-diaminodiphenyl sulfone, diaveridine, dicloxacillin, dihydrostreptomycin, dipyridamole, doxorubicin, doxycycline, epicillin, erythromycin, erythromycin stolate, erythromycin ethyl succinate, erythromycin stearate, ethambutol, flucloxacillin, fluocinolone acetonide, 5-fluorocytosine, filipin, formycin, fumaramidomycin, furaltadone, fusidic acid, geneticin, gentamycin, gentamycin sulfate, gliotoxin, gramicidin, griseofulvin, helvolic acid, hemolysin, hetacillin, kasugamycin, kanamycin (A), lasalocid, lincomycin, magnesidin, melphalan, metacycline, meticillin, mevinolin, micamycin, mithramycin, mithramycin A, mithramycin complex, mitomycin, minocycline, mycophenolic acid, myxothiazole, natamycin, nafcillin, neomycin, neomycin sulfate, 5-nitro-2-furaldehyde semicarbazone, novobiocin, nystatin, oleandomycin, oleandomycin phosphate, oxacihin, oxytetracycline, paromomycin, penicillin, pecilocin, pheneticillin, phenoxymethylpenicillin, phenyl aminosalicylate, phleomycin, pivampicillin, polymyxin B, propicillin, puromycin, puromycin aminonucleoside, puromycin aminonucleoside 5'-monophosphate, pyridinol carbamate, rolitetracycline, rifampicin, rifamycin B, rifamycin SV, spectinomycin, spiramycin, streptomycin, streptomycin sulfate, sulfabenzamide, sulfadimethoxine, sulfamethizole, sulfamethoxazole, tetracycline, thiamphenicol, tobramycin, troleandomycin, tunicarnycin, tunicamycin Al homolog, tunicamycin A2 homolog, valinomycin, vancomycin, vinomycin Al, virginiamycin Ml, viomycin and/or xylostasin.
The term "antiinfectives" encompasses, for example, antimycotics, agents with antiparasitic effect and virustatics, in particular amphotericin, vifonazole, buclosamide, quinoline sulfate, chlormidazole, chlorphenesin, chlorquinaldol, clodantoin, cloxiquine, cyclopirox olamine, dequalinium chloride, dimazole, fenticlor, flucytosine, griseofulvin, ketoconazole, miconazole, natamycin, sulbentine, tioconazole, toinaftate, antiretroviral agents and/or herpes remedies.
The term "antiallergics" encompasses, for example, substances from the class of globulins, corticoids or antihistamines, in particular beclomethasone and derivatives thereof, betamethasone cortisone and derivatives thereof, dexamethasone and derivatives thereof, bamipine acetate, buclizine, clemastine, clemizole, cromoglicic acid, cyproheptadine, diflucortolone valerate, dimetotiazine, diphenhydramine, diphenylpyraline, ephedrine, fluocinolone, histapyrrodine, isothipendyl, methdilazine, oxomemazine, paramethasone, prednylidene, theophylline, and/or tolpropamine tritoqualine.
The term "mitogens", "chemokines" and "cytokines" encompass, for example, interferon-alpha, interferon-beta, interferon-gamma, interleukin-1, interleukin-2, interleukin-7, interleukin-10, interleukin-12, interleukin-18, GM-CSF, MEP-l- alpha/beta, RANTES, EGF, basic or acidic FGF, PDGF, IGF, VEGF, TGF-beta and/or TNF-alpha. The term "dermatics" encompasses, for example, shale oil sulfonates, tar and tar derivatives, astringents, antihidrotics, acne remedies, antipsoriatics, antiseborrheic agents and/or enzyme preparations for the treatment of skin defects.
Consequently, a further aspect of the invention is the use of the polypeptide of the invention or a polynucleotide, a vector or a cell or a composition of the invention for the production of a medicament for the therapy of a proliferative disease, an immune disease, in particular an autoimmune disease, an infectious disease, a vascular disease, rheumatoid disease, in particular osteoarthritis and rheumatoid arthritis or a disease in which cells in or adjacent a disease site express and in particular overexpress, if compared with healthy or normal tissue, γβ3 and/or γβ5 integrin, and inflammatory diseases.
Since the expression or over expression of αγβ3 and/or αγβ5 integrins has been reported in particular for proliferative diseases this type of diseases are preferred diseases which can be treated with a polypeptide, a polynucleotide, a vector, a cell or a composition of the present invention. Particular preferred proliferative diseases are selected from the group consisting of carcinomas of the gastrointestinal or colorectal tract, liver, pancreas, kidney, bladder, prostate, endometrium, ovary, testes, melanoma, dysplastic oral mucosa, invasive oral cancers, small cell and non-small cell lung carcinomas, hormone- dependent breast cancers, independent breast cancers, transitional and squamous cell cancers, neurological malignancies including neuroblastoma, gliomas, astrocytomas, osteosarcomas, soft tissue sarcomas, hemangioamas, endocrinological tumors, hematologic neoplasias including leukemias, lymphomas, and other myeloproliferative and lymphoproliferative diseases, carcinomas in situ, hyperplastic lesions, adenomas, fϊbromas, histiocytosis, chronic inflammatory proliferative diseases, vascular proliferative diseases and virus-induced proliferative diseases.
Furthermore the polypeptides and composition of the present invention can be used or diagnostic purposes in particular, if they are attached to a marker as defined above. Therefore, another aspect of the present inventions is the use of a polypeptide or composition of the present invention for the diagnosis of a disease and in particular of diseases selected from the group of proliferative diseases, immune diseases, in particular autoimmune diseases, infectious diseases, vascular diseases, rheumatoid diseases, inflammatory diseases and diseases associated with an increase or decrease of the expression of αγβ3 and/or αvβ5 integrin. The detection of the marker in vitro in, for example, a biopsy of a patient or in vivo in a patient by, for example, tomographic methodologies will allow the detection of sites of neovascularization within a specimen or within a patient.
The following examples are included to demonstrate preferred embodiments of the invention. It should be appreciated by those of skill in the art that the techniques disclosed in the examples that follow represent techniques discovered by the inventors to function well in the practice of the invention, and thus can be considered preferred modes for its practice. However, those of skill in the art should, in light of the present disclosure, appreciate that many changes can be made in the specific embodiments that are disclosed without departing from the spirit and scope of the invention as set out in the appended claims. All references cited are incorporated herein by reference.
Description of the Figures
Fig. 1: Binding of carboxyfluorescein-labelled RGD- 10 to HUVECs. Thin line - cells without peptide, bold line - cells incubated with CF-labelled RGD- 10.
Fig. 2: Titration of inhibition of RGD-10 binding by peptides RGD-10 or RGD-4C analyzed by cell ELISA.
Fig. 3: Structure of lipopeptides consisting of a peptide ligand with an acetylated N- terminus, the doo spacer linked to a dipalmitoyl-glycero-succinyl-lysine anchor.
Fig. 4: A) Binding of RGD 10 liposomes to HUVEC or B16.F10. Liposomes containing the RGD10-LP1 or RGD10-LP3 lipopeptide at a cone, of 0.1 mol% (thin line), 1 mol% (normal line), or 5 mol% (bold line) were analyzed for binding to HUVECs or B16.F10 (marked with 0). Binding of liposomes lacking lipopeptides is indicated as dotted line. B.) Liposomes containing the RGD 10- LP3 lipopeptide at a cone, of 1 mol% were analyzed for binding to Me Wo or A431 cells. Dotted line = cells alone, normal line = liposomes without lipopeptide, bold line, RGD10-LP3 liposomes.
Fig. 5: Competition experiments. Co-incubation of RGD10-LP3 liposomes (1 mol% lipopeptide) with 100 μM synthetic peptides RGD 10 (A) or RGD-4C (B) completely inhibited binding of liposomes to HUVEC. In contrast, an RGE peptide (C) or a molecule consisting of 5 doo units did not cause any inhibition. Thin line = cells alone, normal line = plus peptide or 5 doo, bold line = liposomes without competitor.
Fig. 6: Cell binding and internalization of RGD-10-LP3 liposomes. Fluorescence microscopy analysis of binding of RGD10-LP3 liposomes or liposomes lacking lipopeptide (untargeted liposomes) to HUVECs at 4°C or 37°C. While at 4°C a cell surface staining is observed for RGD10-LP3 liposomes, incubation at 37°C for 2 hrs resulted in a perinuclear accumulation of fluorescence indicative for internalization of the liposomes.
Fig. 7: Pharmacokinetic analysis of liposomes containing 1 mol% LP1, 1 mol% LP3, or 0.1 mol% LP3.
Fig. 8: Antitumor effects of LP3-liposomes (Dox-LP3 liposomes) loaded with doxorubicin in comparison to untargeted liposomes (Dox liposomes) or free doxorubicin analyzed in a C26 murine colon carcinoma tumor model.
Examples
Example 1: Selection of novel RGD peptides
Two composed peptide libraries (CPL4b, CPL4c) containing a RGD motif flanked by cysteine residues were generated. Six amino acid positions, three preceding and three following the central -CRGDC- motif were randomized introducing the codon BNK (B = G,T,C; K = G,T; N = A,C,G,T) encoding all amino acids except Lys, He, Met, Thr, and Asn. Lysine residues were avoided in order to facilitate a directional chemical coupling through the N-terminal amino group. CPL4b differed from CPL4c by an Asp- Gly sequence at the C-terminus. Peptides were selected on human dermal microvascular endothelial cells (HDMEC), a human melanoma cell line (Me Wo), or a mixture of murine melanoma cell lines B16.F1 and B16.F10.
A total of 15 different sequences, with some sequences occurring several times were identified, which are summarized in Table I.
Table 1 : Isolated RGD peptides
# target cells sequence frequency SEQ ID NO.
4C-peptides
1 1 H HDDMMEECC,, MMee WWoc » VCOCRGDCFCP 4 1
22 HHDDMMEECC VCOCRGDCLCV 1 2
33 HHDDMMEECC PCHCRGDCLCO 1 3
44 HHDDMMEECC FCECRGDCLCF 2 4
55 MMeeWWoo ECOCRGDCLCP 1 5
66 BB1166FF11//FF1100 EACCRGDCVCE 1 6 RRGGDD--44CC((11))** ACDCRGDCFCG RRGGDD--44CC((22))** ACDCRGDCLCG
22CC--ppeeppttiiddeess
7 B16F1/F10 7
8 B16F1/F10 ARVCRGDCVDO 2 8
9 HDMEC ARSCRGDCVEA 1 9
1100 HHDDMMEECC AARRYYCCRRGGDDCCFFDDGG 11 10
11 B16F1/F10 ALYCRGDCVDO 4 11
12 B16F1/F10 AFLCRGDCVDF 1 12
13 MeWo LSGCRGDCFOO 1 13
1144 MMeeWWoo LLSSAACCRRGGDDCCOORRVV 11 14
15 MeWo FPGCRGDCSOE 1 15
*RGD-4C (1) and RGD-4C(2) sequences are from Koivunen, et al. (1995) Bio/Technol. 13, 265-270. Except for two peptides selected on MeWo, all peptides were from the CPL4b library. The identified sequences can be divided into two groups. Peptides of group one (4C- RGD peptides) contain four cysteine residues either at positions 4, 6, 10, and 12 (peptides 1-5) or at positions 5, 6, 10 and 12 (peptide 6), with positions 6 and 10 corresponding to the fixed cysteine residues. Peptides 1-5 all contained a hydrophilic residue at position 5 (Q, E, H) and a hydrophobic residue at position 11 (L, F). Peptides of group two (2C-RGD peptides) contain only the two fixed cysteine residues at position 6 and 10. 4 out 6 peptides have an arginine residue at position 4 and an aspartate or glutamate residue at position 12 (peptides 7-12). These peptides preferred an alanine residue at position 3 and a valine residue at position 11.
Example 2: Characterization of peptide RGD-10
Analysis of 4C and 2C peptides for binding to endothelial or melanoma cells showed binding activities similar to or better then RGD-4C known to be a high affinity ligand of αv-integrins and included as control. For further analysis we selected 2C-RGD peptide RGD-10 GARYCRGDCFDG). The RGD-10 peptide was synthesized with the sequence GARYCRGDCFDG, thus lacking the C-terminal aspartate residue and resulting in a neutral net charge. Direct binding of RGD-10 to HUVEC was demonstrated with a synthetic carboxyfluorescein-labeled RGD-10 peptide (Fig. 1). RGD-10 peptide bound with comparable strength as RGD-4C to HDMEC. For these experiments RGD-4C was oxidized in a two-step process to obtain disulfide bonds between C1-C4 and C2-C3 described to be essential for high affinity binding (Assa- Munt, et al. (2001) Biochemistry 40: 2373-2378). Compared to RGD-4C, RGD-10 contains only 2 cysteine residues, which facilitates synthesis of oxidized peptides using a one-step oxidation reaction. Furthermore, RGD-10 contains two aromatic residues, which allows spectrophotometrical detection at 280 nm. Competition experiments with free RGD-10, RGD-4C, and a non-RGD control peptide showed that both RGD peptides bind to the same epitope as RGD-4C. A titration of competition gave identical IC50 values of approximately 0.2 μmol/1 for RGD-10 and RGD-4C (Fig. 2). Thus, RGD- 10 binds with the same affinity to integrin-expressing cells as RGD-4C, however, is much simpler to produce. Example 3: Binding of RGDIO-lipopeptide containing liposomes to endothelial and melanoma cells
A novel lipopeptide structure composed of a l,2-dipalmitoyl-glycero-3-succinyl -lysine anchor to which the RGD-10 peptide was coupled using 1 or 3 copies of 8-amino-3,6- dioxaoctanoic acid (doo) as spacer (Fig. 3) was designed.
Liposomes had the following lipid composition: 35 mol% cholesterol, 32,1 mol% palmitoyl-oleoyl-phosphatidylcholine (POPC), 14,7 mol% dilauroyl- phosphatidylethanolamine (DLPE), 18.2 mol% milk derived SM. The lipopeptideanchors were added at a molar ratio of 0.1 to 3 mol% reducing the concentration of lipids proportionally. All lipids were purchased from Avanti Polar Lipids (USA) and lipopeptides were synthesized by emc (Germany). Lipids and lipopeptides were used without further purification. Liposomes were prepared from dried lipid films by rehydration. For this purpose lipids and lipopeptides were dissolved in chloroform or chloroform/methanol (1:1) and mixed at the indicated ratios. For binding studies 0,03 mol% rhodamine-DPPE was added. Lipids were dried using a rotary evaporator and residual solvent was removed under high vacuum. Lipid films were then rehydrated with PBS pH 7.4 to a final lipid concentration of 10 μmol/ml. Liposomes were extruded 21 -times through 50 nm membranes. All lipopeptide- containing liposomes had an average size of 76 +/- 2 nm. Thus the incorporation of 1 mol% lipopeptide corresponds to a theoretical value of approximately 350 surface- displayed ligands per liposome. Tumor cells were incubated with liposomes (50 nmol lipid) at 4°C for 30 min and subsequently analyzed by flow cytometry for cell binding activity.
With liposomes containing these RGD-10 lipopeptides (RGD10-LP1 with a 1-doo spacer, RGD10-LP3 with a 3-doo spacer) specific binding to endothelial cells as well as melanoma cells could be detected. Strong binding was observed for human umbilical vein endothelial cells (HUVEC) and to some weaker extent for murine melanoma cell line B16.F10 (Fig. 4A). Analysis of mean fluorescence revealed a 2-3 fold stronger binding to HUVECs compared to B16.F10. Only weak binding was seen with MeWo (Fig. 4B). No binding was observed with A431 tumor cells included as integrin-negative cell line (Fig. 4B). Binding experiments with liposomes containing 0.1, 1, or 5 mol% RGD10-LP1 or RGD10-LP3 showed that binding to these cells increased with increasing concentrations of lipopeptides (Fig. 4A). A 1.5 to 2-fold stronger binding was observed for 1 mol% LP1 or LP3 compared to 0.1 mol% lipopeptide. In addition, liposomes containing RGD10-LP3 showed increased binding (1.5 to 2-fold) to HUVEC or B16.F10 compared to liposomes containing RGD10-LP1, indicating that the longer doo-spacer improves binding to the cell surface.
In order to demonstrate that binding is mediated by the RGD-10 peptide, various competition experiments were performed. Synthetic peptides RGD-10 or RGD-4C but not an irrelevant control peptide completely inhibited binding of RGD 10 LP1- containing liposomes to HUVEC or B16.F10 (Fig. 5). In addition, no inhibition of binding was observed with a RGE peptide further demonstrating specificity of the RGD-10 ligand. Thus, binding to integrin-expressing cells is specifically mediated by the RGD peptide. Incubation of RGDIO-liposomes with excess amount of a molecule consisting of 5 doo units (5-doo) did not inhibit binding to HUVECs indicating that the spacer region of the lipopeptide consisting of 1 or 3 doo units does not contribute to cell binding.
Fluorescence microscopy of HUVECs incubated with RGD10-LP3 liposomes at 37°C for 1 hr revealed a perinuclear staining pattern indicative for internalized liposomes. In contrast, only cell surface staining was observed after incubation at 4°C (Fig. 6). In these experiments, no staining was observed with liposomes lacking the RGD 10 lipopeptide. These experiments demonstrate that RGD-targeted liposomes are taken up by integrin-expressing cells.
Example 4: Pharmacokinetics of RGD10-LP3 liposomes
Pharmacokinetics was analyzed in nude mice injected with 3H-cholesteryloleylether- labelled liposomes containing different amounts of lipopeptide (Fig. 7). Liposomes were prepared as described in example 3. Liposomes containing 1 mol% RGD10-LP1 or RGD10-LP3 were rapidly eliminated from the blood stream with a t 2 of approximately 9-10 minutes. Reduction of the amount of lipopeptide incorporated into liposomes to 0.1 mol% prolonged serum residence time to 102 min as calculated for the 50% value (tι/2α = 44 min, tι/2β = 9.2 h). This value is close to the serum residence time of liposomes lacking lipopeptides, which is approximately 108 min. Measuring organ distribution 6 hours postinjection we found for all lipopeptide-containing formulations accumulation in the liver (51-54% injected dose) and spleen (4-11% injected dose) and only marginal accumulation in the kidneys and lung.
Example 6: Antitumor effects of doxorubicin-Ioaded RGD10 liposomes Based on the pharmacokinetic data we used RGD10-LP3 liposomes containing 0.1% lipopeptide for analysis of in vivo antitumor effects. For this purpose liposomes were loaded with doxorubicin and analyzed in a C26 colon carcinoma mouse model.
Doxorubicin was encapsulated into liposomes (see example 3 for composition) containing 0.1% lipopeptide. As control we included liposomes lacking RGD-10 lipopeptide. Lipid films were rehydrated with 300 mmol/1 citrat buffer pH 4.0. After extrusion the pH of the external aqueous solution was adjusted to pH 7.4 with NaOH. Liposomes were heated to 60°C and doxorubicin in PBS was added and incubated for 15 min. A drug to lipid ratio of 1:5 (w/w) was used in these experiments. Unencapsulated doxorubicin was removed by ultrafiltration using Vivaspin columns (centrifugation at 2800 rpm for 10 min). Encapsulation efficiency was determined by HPLC analysis of doxorubicin on a RP18 column and was found to be in the range of 70-90%.
Pharmacodynamic experiments were performed in a C26 murine colon carcinoma model. For this purpose tumor cells were injected subcutaneously into nude mice. Tumor-bearing mice were then treated with doxorubicin-Ioaded liposomes injecting a doxorubicin dose of 4 mg/kg body weight at days 1, 3 and 6 after tumors had reached a size of approximately 50-100 mm .
These experiments revealed an improved antitumor effect of doxorubicin-Ioaded RGD10-LP3 liposomes compared to free doxorubicin and to untargeted liposomes (Fig. 8). After 11 days tumor growth was inhibited by 45% (calculated from the tumor volume) compared to mice treated with untargeted liposomes. This improved antitumor effect was also reflected by a prolonged mean survival time, which was 18 days for animals treated with doxorubicin-Ioaded RGD10-LP3 liposomes, compared to 15 days for untargeted liposomes.

Claims

Claims
1. A polypeptide comprising at least one binding peptide having an amino acid sequence as indicated by the general formula (I) X1X2X3Y1 Y2Y3Y4YιX X5X6 or by the general formula (II) X7X8X9Y1Y2Y3Y4Y1X10Y1X11, wherein
Yi is Cys Y2 is Arg Y3 is Gly Y4 is Asp Xi is Ala, Leu, Phe or Ser, in particular Ala or Leu; X2 is Arg, Leu, Phe, Pro, or Ser, in particular Arg or Ser; X3 is Ala, Gly, Leu, Ser, Tyr, or Val, in particular Gly, Leu, or Tyr; X4 is Gin, Phe, Ser, or Val, in particular, Phe or Val; X5 is Arg, Asp, Glu, or Gin, in particular Asp or Gin; X6 is Ala, Gin, Glu, Gly, Phe, or Val, in particular Ala, Gin or Gly; X7 is Glu, Phe, Pro, or Val, in particular Glu or Val; X8 is Ala or Cys, in particular Cys; X9 is Asp, Cys, Gin, or His, in particular Gin; Xio is Leu, Phe, or Val, in particular Leu; and Xu Gin, Phe, Pro, or Val, in particular Pro, wherein Xh X2, X3, X4, X5, X6, X7, Xs, X9, Xio, X11, Yi, Y2, Y3, Y are independently of each other the D or L amino acid or the amino acid residue mimetic of the respectively indicated amino acid; or said amino acid sequence, which lacks 1 or 2, preferably 1, amino acid(s) from the N-terminus or C-terminus or 1 amino acid from the N- and C-terminus.
2. The polypeptide of claim 1, wherein:
Figure imgf000034_0001
X2 is Arg or Ser; X3 is Gly, Leu, or Tyr 4 is Phe or Val; X5 is Asp or Gin; X6 is Ala, Gin, or Gly; X7 is Glu or Val; X8 is Cys; X9 is Gin; Xio is Leu; and Xu is Pro.
3. The polypeptide of claim 1, wherein the amino acid sequence is as shown in SEQ ID NOs l to l5.
4. The polypeptide of one of claims 1 to 3 having a length of 100, preferably 20 and most preferably 12 amino acids.
5. The polypeptide of one of claims 1 to 4, which comprises at least one amino acid sequence selected from the group consisting of a cytokine, a chemokine, a growth factor, an adhesion molecule, an antibody light and/or heavy chain, a single chain antibody, a toxin, an enzyme, a receptor ligand, a lytic peptide, a membrane insertion sequence and a fluorescent protein or fragments thereof.
6. The polypeptide of one of claims 1 to 5, which is attached to at least one chemical moiety.
7. The polypeptide of claim 6, wherein the chemical moiety is selected from the group consisting of a spacer, a marker, a tag, a lipid, in particular a phospholipid, a drug, a capping group and a spacer attached to a second chemical moiety.
8. The polypeptide of claim 7, wherein the spacer is selected from the group consisting of bifunctional polyethylenglycol and derivatives thereof, oligopeptides comprising between 1 to 40 natural or synthetic amino acids, 8-amino-3,6- dioxatanoic acid (doo), and (doo)„, with n = 2-10.
9. The polypeptide of claim 7, wherein the marker is selected from the group consisting of an electron dense molecule, a paramagnetic molecule, a superparamagnetic molecule, a radioactive molecule, a non-radioactive isotope, and a fluorescent molecule.
10. The polypeptide of claim 7, wherein the lipid is selected from the group consisting of glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphono- lipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroids, stearines, steroles, and carbohydrate containing lipids.
11. The polypeptide of claim 10, wherein the phospholipid is selected from the group consisting of phosphatidylcholine (PC), phosphatidylserine (PS), and phosphatidylethanolamine (PE), in particular distearoylphosphatidyl (DSPE) or alpha-(dipalmitoylphosphatidyl (DPP).
12. The polypeptide of claim 7, wherein the lipid is selected from the group consisting of N-caproylamine-PE, N-dodecanylamine-PE, phophatidylthioethanol, N-[4-(p- maleimidomethyl)cyclohexane-carboxamide-PE (N-MCC-PE), N-[4-(p- maleimidophenyl)butyramide]-PE (N-MPB), N-[3-(2-pyridyldithio)propionate]-PE (N-PDP), N-succinyl-PE, N-glutaryl-PE, N-dodecanyl-PE, N-biotinyl-PE, N- biotinyl-cap-PE, phosphatidyl-(ehtylene glycol), PE-polyethylene glycol (PEG)- carboxylic acid, PE-PEG-maleimide, PE-PEG-PDP, PE-PEG-amine, PE-PEG- biotin, PE-PEG-HNS, dipalmitoyl-glycerosuccinyl-lysine, alpha-methoxy-omega- (1,2-dioctadecenoyloxy glyceryl) (DO), alpa-methoxy-omega-(l,2- ditetradecenoyloxy glyceryl) (DT).
13. The polypeptide of claim 7, wherein the second chemical moiety is selected from the group consisting of a drug, a marker, a tag, and a lipid.
14. A polynucleotide encoding at least one polypeptide of claims 1 to 5.
15. The polynucleotide of claim 14 which is DNA or RNA.
16. A vector containing the polynucleotide of claim 14 or 15.
17. The vector of claim 10, wherein the polynucleotide is operatively linked to expression control sequences allowing expression in prokaryotic and/or eukaryotic host cells.
18. A host cell genetically engineered with the polynucleotide of claim 14 or 15 or the vector of claim 16 or 17.
19. A transgenic non-human animal containing a polynucleotide of claim 14 or 15, a vector of claim 16 or 17 and/or a host cell of claim 18.
20. An antibody specifically binding to the amino acid sequence within the polypeptides of claims 1 to 13.
21. A composition comprising at least one polypeptide of one of claims 1 to 13 and at least one further component selected from the group consisting of liposomes, virosomes, microspheres, niosomes, dentrimers, stabilizers, buffers, excipients and additives.
22. The composition of claim 21, wherein the polypeptide is integrated into or attached to the liposome, microspheres, niosomes, dentrimers, or virosome.
23. The composition of claim 21 or 22, wherein the liposome or virosome comprises lipids selected from the group consisting of glycerides, glycerophospholipides, glycerophosphinolipids, glycerophosphonolipids, sulfolipids, sphingolipids, phospholipids, isoprenolides, steroids, stearines, steroles, and carbohydrate containing lipids.
24. The composition of one of claims 21 to 23, wherein the liposome or virosome comprises cholesterol (CH) and sphingomyelin (SM).
25. The composition of claim 24, wherein CH and SM are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of 40 to 60 mol% and 10 to 20 mol%, respectively.
26. The composition of claim 25, wherein CH and SM are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of 48 to 52 mol% and 12 to 16 mol%, respectively.
27. The composition of one of claims 24 to 26 further comprising PE and/or PC.
28. The composition of claim 27, wherein PE and PC are present in relation to the total molar lipid composition of the liposome or virosome at a molar ratio of 5 to 25 mol% and 15 to 40 mol%, respectively.
29. The composition of claims 21 to 28 further comprising a drug selected from the group consisting of analgesics, antirheumatics, anthelminthics, antiallergics, antianemics, antiarrhythmics, antibiotics, angiogenesis inhibitors, antiinfectives, antidemenics (nootropics), antidiabetics, antidotes, antiemetics, antivertiginosics,, antiepileptics, antihemorrhagics, antihypertonics, antihypotonics, anticoagulants, antimycotics, antitussiv agents, antiviral agents, beta-receptor and calcium channel antagonists, broncholytic and antiastmatic agents, chemokines, cytokines, mitogens, cytostatics, cytotoxic agents and prodrugs thereof, dermatics, hypnotics and sedatives, immunosuppressants, immunostimulants, peptide or protein drugs, in particular hormones and physiological or pharmacological inhibitors of mitogens, chemokines, or cytokines or their respective prodrugs. Of course it is also envisioned that a liposome of the invention comprises more than one drug at once.
30. The compositions of claim 29, wherein the cytostatics and cytotoxic drugs are selected from the group consisting of alkylating substances, anti-metabolites, antibiotics, epothilones, nuclear receptor agonists and antagonists, anti-androgenes, anti-estrogens, platinum compounds, hormones and antihormones, interferons and inhibitors of cell cycle-dependent protein kinases (CDKs), inhibitors of cyclooxygenases and/or lipoxygenases, biogeneic fatty acids and fatty acid derivatives, including prostanoids and leukotrienes, inhibitors of protein kinases, inhibitors of protein phosphatases, inhibitors of lipid kinases, platinum coordination complexes, ethyleneimenes, methylmelamines, trazines, vinca alkaloids, pyrimidine analogs, purine analogs, alkylsulfonates, folic acid analogs, anthracendiones, substituted urea, methylhydrazin derivatives, in particular acediasulfone, aclarubicine, ambazone, aminoglutethimide, L-asparaginase, azathioprine, bleomycin, busulfan, calcium folinate, carboplatin, carpecitabine, carmustine, celecoxib, chlorambucil, cis-platin, cladribine, cyclophosphamide, cytarabine, dacarbazine, dactinomycin dapsone, daunorubicin, dibrompropamidine, diethylstilbestrole, docetaxel, doxorubicin, enediynes, epirubicin, epothilone B, epothilone D, estramucin phosphate, estrogen, ethinylestradiole, etoposide, flavopiridol, floxuridine, fludarabine, fluorouracil, fluoxymesterone, flutamide fosfestrol, furazolidone, gemcitabine, gonadotropin releasing hormone analog, hexamethylmelamine, hydroxycarbamide, hydroxymethylnitrofurantoin, hydroxyprogesteronecaproat, hydroxyurea, idarubicin, idoxuridine, ifosfamide, interferon α, irinotecan, leuprolide, lomustine, lurtotecan, mafenide sulfate olamide, mechlorethamine, medroxyprogesterone acetate, megastrolacetate, melphalan, mepacrine, mercaptopurine, methotrexate, metronidazole, mitomycin C, mitopodozide, mitotane, mitoxantrone, mithramycin, nalidixic acid, nifuratel, nifuroxazide, nifuralazine, nifurtimox, nimustine, ninorazole, nitrofurantoin, nitrogen mustards, oleomucin, oxolinic acid, pentamidine, pentostatin, phenazopyridine, phthalylsulfathiazole, pipobroman, prednimustine, prednisone, preussin, procarbazine, pyrimethamine, raltitrexed, rapamycin, rofecoxib, rosiglitazone, salazosulfapyridine, scriflavinium chloride, semustine streptozocine, sulfacarbamide, sulfacetamide, sulfachlopyridazine, sulfadiazine, sulfadicramide, sulfadimethoxine, sulfaethidole, sulfafurazole, sulfaguanidine, sulfaguanole, sulfamethizole, sulfamethoxazole, co-trimoxazole, sulfamethoxydiazine, sulfamethoxypyridazine, sulfamoxole, sulfanilamide, sulfaperin, sulfaphenazole, sulfathiazole, sulfisomidine, staurosporin, tamoxifen, taxol, teniposide, tertiposide, testolactone, testosteronpropionate, thioguanine, thiotepa, tinidazole, topotecan, triaziquone, treosulfan, trimethoprim, trofosfamide, UCN-01, vinblastine, vincristine, vindesine, vinblastine, vinorelbine, and zorubicin, or their respective derivatives or analogs thereof.
31. Use of a polypeptide of one of claims 1 to 13 or of a composition of one of claims 21 to 30 for the production of a medicament for the therapy of proliferative diseases, immune diseases, in particular autoimmune diseases, infectious disease, a vascular diseases, rheumatoid diseasse, in particular osteoarthritis and rheumatoid arthritis or diseases in which cells in or adjacent a disease site express αγβ3 and/or αvβ5 integrin, and inflammatory diseases.
32. The use of claim 31, wherein the proliferative disease is selected from the group consisting of carcinomas of the gastrointestinal or colorectal tract, liver, pancreas, kidney, bladder, prostate, endometrium, ovary, testes, melanoma, dysplastic oral mucosa, invasive oral cancers, small cell and non-small cell lung carcinomas, hormone-dependent breast cancers, independent breast cancers, transitional and squamous cell cancers, neurological malignancies including neuroblastoma, gliomas, astrocytomas, osteosarcomas, soft tissue sarcomas, hemangioamas, endocrinological tumors, hematologic neoplasias including leukemias, lymphomas, and other myeloproliferative and lymphoproliferative diseases, carcinomas in situ, hyperplastic lesions, adenomas, fibromas, histiocytosis, chronic inflammatory proliferative diseases, vascular proliferative diseases and virus-induced proliferative diseases.
33. The use of a polypeptide of claims 1 to 13 and/or a composition of claims 21 to 30 for the diagnosis of proliferative diseases, immune diseases, infectious diseases, vascular diseases, rheumatoid diseases, inflammatory diseases, and diseases associated with an increase or decrease of the expression of αvβ3 and/or αvβ5 integrin.
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