WO2005017146A1 - 相互作用阻害剤、相互作用阻害剤検出方法および相互作用阻害剤検出キット - Google Patents
相互作用阻害剤、相互作用阻害剤検出方法および相互作用阻害剤検出キット Download PDFInfo
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- WO2005017146A1 WO2005017146A1 PCT/JP2004/011686 JP2004011686W WO2005017146A1 WO 2005017146 A1 WO2005017146 A1 WO 2005017146A1 JP 2004011686 W JP2004011686 W JP 2004011686W WO 2005017146 A1 WO2005017146 A1 WO 2005017146A1
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
- G01N33/6875—Nucleoproteins
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61P—SPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
- A61P43/00—Drugs for specific purposes, not provided for in groups A61P1/00-A61P41/00
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/48—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase
- C12Q1/485—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving transferase involving kinase
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2500/00—Screening for compounds of potential therapeutic value
- G01N2500/02—Screening involving studying the effect of compounds C on the interaction between interacting molecules A and B (e.g. A = enzyme and B = substrate for A, or A = receptor and B = ligand for the receptor)
Definitions
- the present invention relates to a protein interaction inhibitor, a method for detecting an interaction inhibitor, and a kit for detecting an interaction inhibitor in a transmission pathway related to the regulation of T cell activity and the like.
- the PKC (Protein Kinase C) family is a serine Z threonine kinase that is activated by specific binding to various lipid messengers such as Ca ions, phospholipids, fatty acids, phosphoric esters, and diacylglycerol. And regulates cell growth and proliferation.
- PKC families are classified into three types: normal (Conventional or Classical), novel (Novel), and atypical (Atypical), depending on the difference in regulatory domains. There are three types of normal types: ⁇ , ⁇ , and ⁇ . There are four new types, ⁇ , ⁇ , ⁇ , and ⁇ . In addition, there are two types of variants, ⁇ and I.
- PKC ⁇ a member of the PKC family, is a new type of PKC that is independent of Ca ions.
- One of the functions of PKC ⁇ has been revealed to be T cell activation. The ability to express other PKCs in T cells It is thought that only PKC0 contributes to T cells among PKCs.
- T cells that recognize an antigen produce IL 2 (interleukin 2) as a growth factor, express an IL-2 receptor, and proliferate in an IL 2-dependent manner.
- T cells derived from mice knocked out of PKC ⁇ do not activate T cells in response to external stimuli as described above, resulting in reduced production of IL 2 (eg, Non-Patent Document 1). It is known that inflammatory bowel disease and hemolytic anemia occur in IL2 gene knockout mice (for example, Non-Patent Document 2).
- transcription factors such as NF- ⁇ play an important role in regulating the transcription activity of the IL2 gene.
- Non-patent document 1 Christopher WA et al., (2002) Current Opinion i n Immunology 12: 323—330
- Non-Patent Document 2 Horak I., (1995) Clinical Immunology and Immunopatology Sep; 76 (3 Pt 2): SI 72-3
- T cells, IL2, and the like play an extremely important role in the physiological functions of living organisms, particularly in the immune system.
- the specific pathways involved in the regulation of T cell activity and the production of IL2 are still elucidated! It is expected that transmission pathways related to T cell activity regulation and production of IL2 are diverse and complex. It is necessary to know at what stage and what substances are involved in the identification of the transmission pathway.However, many substances are involved in the transmission pathway related to the regulation of T cell activity, etc. It is possible, and it is not easy to identify the substances involved in the transduction pathway because they may function in a very small amount or the stability of the substance itself may be low.
- the first step is to look for new combinations of protein interactions in the transduction pathway, thereby providing new drug targets and promoting the development of new drugs that differ from the conventional mechanism of action. Be expected.
- the present invention has been made in view of the above circumstances, and relates to a protein interaction inhibitor and a method for detecting an interaction inhibitor, which are involved in T cell activity regulation, IL 2 production, and the like. It is an object to provide a method, a kit for detecting an interaction inhibitor, and the like.
- the present inventors have advanced research on factors predicted to be associated with T cells and IL2, and studied biological information such as regulation of T cell activity or IL2 production.
- the present inventors have found a new combination of interactions involving PKC ⁇ and NF- ⁇ B, and have completed the present invention based on powerful knowledge.
- the present invention provides the following interaction inhibitor, an interaction inhibitor detection method and an interaction detection kit, and a drug target.
- PKC ⁇ and KPNA1 Under conditions in which PKC ⁇ and KPNA1 can interact, PKC ⁇ and KPNA1 coexist with the candidate compound, and it is tested whether or not PKC ⁇ and KPNA1 have interacted with each other.
- a method for detecting an inhibitor of the interaction between PKC ⁇ and KPN A1, wherein a candidate compound that has been shown to be inhibited is detected as an inhibitor.
- KPNA1 and NF- ⁇ B coexist with the candidate compound under conditions where KPNA1 and NF- ⁇ B can interact, and whether KPNA1 interacts with NF- ⁇ B And KPNA1 and KPNA1 are detected as inhibitors.
- NF A method for detecting inhibitors of the interaction with ⁇ B.
- a kit for detecting an inhibitor of the interaction between PKC ⁇ and KPNA1, comprising a PKC ⁇ supply sample and a KPNA1 supply sample.
- the kit for detecting the inhibitor according to the above [9] or [10], which is a kinase having a constant phosphorylation activity is a kinase having a constant phosphorylation activity.
- a kit for detecting an inhibitor of the interaction between KPNA1 and NF- ⁇ comprising a KPNA1 supply sample and an NF- ⁇ supply sample.
- a method comprising, in drug development, targeting the interaction between KPNA1 and NF- ⁇ as a drug discovery target.
- an inhibitor of an interaction associated with PKC ⁇ and NF- ⁇ a method for detecting the inhibitor, and a detection kit.
- the present invention also provides a drug discovery target.
- PKC ⁇ and NF- ⁇ are important factors in biological information transmission such as regulation of ⁇ cell activity and IL2 production, and the present invention contributes to the biotechnology industry including pharmaceuticals etc.
- FIG. 1 is a view showing that PKC ⁇ and KPNA1 are bound in a cell.
- FIG. 2 is a view showing that KPNA1 was phosphorylated by PKC ⁇ .
- FIG. 3 is a diagram showing that KPNA1 and ⁇ - 50 and ⁇ 65, which are constituent proteins of NF- ⁇ , bind intracellularly.
- FIG. 4 is a schematic view of a part of the left electrophoresis image of FIG. 1.
- FIG. 5 is a schematic view of a part of the electrophoretic image of FIG. 2.
- FIG. 6 is a schematic diagram of a part of lanes 1 and 2 of the left electrophoresis image of FIG. 3.
- FIG. 7 is a view showing experimental results of Example 4.
- the interaction inhibitor of the present invention is a substance that inhibits a protein interaction related to the regulation of T cell activity or IL2 production, and includes an inhibitor of an interaction between PKC ⁇ and KPNA1, and an inhibitor of KPNA1 and NF— Includes two forms of inhibitors of interaction with kappa B.
- One form of the interaction inhibitor of the present invention inhibits the interaction between PKC ⁇ and KPNA1.
- PKC ⁇ is a factor that affects T cell activation and is required for IL-2 production.
- transcription of the IL2 gene must be induced by a transcription factor such as NF- ⁇ B.
- NF- ⁇ B a transcription factor that influences the transcription of the IL2 gene by a transcription factor such as PKC-induced NF- ⁇ B.
- the activity of NF- ⁇ B as a transcription factor is known to be controlled by translocating its intracellular localization into the nucleus. The pathway for its nuclear translocation is unknown. there were.
- KPNA1 is a protein that recognizes proteins that function in the nucleus, such as transcription factors, and works to transport them to the nucleus and cytoplasm.
- the present inventors have proposed PKC ⁇ It was confirmed that KPNA1 interacts, that PKC ⁇ phosphorylates KPNA1 using KPNA1 as a substrate, and that KPNA1 interacts with NF- ⁇ . These results have revealed that KPNA1 responsible for nuclear transport of proteins is involved in the unknown pathway from PKC ⁇ to NF- ⁇ activation.
- a substance that inhibits the interaction between PKC1 and KPNA1 is a substance that has a high probability of regulating the activity of ⁇ cells and regulating the production of IL2. That is, a substance that inhibits the interaction between ⁇ C ⁇ and KPNA1 is a promising candidate for a drug for preventing and / or treating diseases related to the regulation of cell activity and production of IL2.
- PKC ⁇ or ⁇ ⁇ -1 is a substance directly related to the transduction pathway. Being a promising candidate for prophylactic and / or Z-therapeutic agents for diseases related to activity regulation or IL-2 production, even its initial idea, has never existed.
- the present invention also provides a completely new target for drug discovery by finding an entirely new combination of interactions between PKC ⁇ and KPNA1.
- the inhibitor of the present embodiment may be any substance that inhibits the interaction between PKC ⁇ and KPNA1, and is not particularly limited.
- the inhibitor of the present embodiment is not limited to a material or the like, but may be a biological substance such as a polynucleotide or a protein, or may be an inorganic or organic chemical.
- PKCP and KPNA1 are allowed to coexist with a candidate compound under the condition that PKC ⁇ and KPNA1 can interact with each other.
- Compounds that have been tested for whether or not the interaction has produced a force and that have been shown to inhibit the interaction are exemplified. The test for whether or not a protein interaction has occurred is described in detail below.
- Another form of the inhibitors of the present invention inhibits the interaction between KPNA1 and NF- ⁇ .
- KPNA1 interacts with PKC, which is a factor affecting cell activation, and is a substrate phosphorylated by PKC.
- NF- ⁇ interacts with KPNA1, which is responsible for nuclear transport of proteins.
- NF- ⁇ is a factor that activates transcription of the IL 2 gene by translocating into the nucleus.
- a substance that inhibits the interaction between KPNA1 and NF- ⁇ ⁇ is a substance that is extremely likely to suppress the production of IL2. That is, a substance that inhibits the interaction between KPNA1 and NF- ⁇ is a promising candidate for a drug for preventing or treating diseases related to ⁇ cell activity regulation or abnormal IL-2 production.
- KPNA1 and NF- ⁇ are directly related substances in the transduction pathway. It has become a potential candidate for a prophylactic and / or therapeutic agent for diseases related to the regulation of IL2 activity or IL-2 production, even with no initial idea.
- the present invention also provides a completely new and specific drug discovery target by finding a completely new combination of interactions between KPNA1 and NF- ⁇ .
- the inhibitor of the present embodiment may be any substance that inhibits the interaction between KPNA1 and NF- ⁇ NF, and is not particularly limited.
- the inhibitor of the present embodiment may be a biological substance such as a polynucleotide or a protein which is not limited by a material or the like, or may be an inorganic or organic chemical.
- KPNA1 and NF- ⁇ are allowed to coexist with a candidate compound under conditions where KPNA1 and NF- ⁇ Tests whether or not the interaction with 1 has occurred, and shows substances that have been shown to inhibit the interaction.
- the test for determining whether or not the protein interaction has occurred is described in detail below.
- the method for detecting an interaction inhibitor of the present invention is for detecting a substance that inhibits a protein interaction related to the regulation of cell activity or IL2 production, and comprises an inhibitor of the interaction between PKC ⁇ and KPNA1.
- PKCP and KPNA1 are allowed to coexist with a candidate compound under conditions that allow PKC ⁇ and KPNA1 to interact, and whether PKC PK and KPNA1 interact with each other is determined. Perform a test.
- Providing conditions under which PKC ⁇ and KPNA1 can interact is a prerequisite for accurately detecting that the protein interaction was inhibited by the candidate compound of the inhibitor. Any conditions are possible, for example, in vitro or in vivo. Preferably, conditions that can sufficiently maintain the three-dimensional structure of the mutual contact site in each protein interaction involved in the interaction are suitable.
- a field in which the protein can interact with a liquid solvent to which the protein can be added is provided.
- the liquid solvent is an aqueous solution.
- the temperature of the liquid solvent is preferably room temperature, more preferably 30 to 37 ° C, and the pH is preferably neutral, more preferably 6.5 to 8.5. Adjusted.
- the liquid solvent thus prepared may contain other auxiliary components such as a suitable buffer for maintaining the above-mentioned pH.
- PKCP and KPNA1 are already known, and these genes may be transduced by genetic engineering, expressed in a predetermined host cell, and interacted with each other.
- a probe may be created based on the sequence recorded in a sequence database or the like, and the cDNA library may be extracted as much as possible, or a primer may be prepared and a PCR method, etc. And can be obtained by amplification.
- a cDNA library containing PKC ⁇ and KPNA1 is also available as a commercial library.
- PKC exhibits a constant phosphorylation activity.
- constant phosphorylation activity refers to a normal biochemical activity that can maintain the three-dimensional structure of a protein, which is not such that the phosphorylation switch is turned on or off by an external factor. It means that phosphoric acid is always exhibited under the conditions.
- the phosphoridation activity as used herein refers to an activity of catalyzing a phosphorylation reaction.
- the method for detecting an inhibitor of the interaction with PKC ⁇ tK PNA1 the occurrence of the interaction between PKC ⁇ and KPNA1 can be detected as KPNA1 phosphorylated. Therefore, If inactivated PKCII is used, false negatives may occur. Therefore, the reliability as a detection method can be improved by using PKC II that shows a constant phosphorylation activity as described above.
- Examples of the kinase exhibiting a constant phosphorylation activity include a protein having an amino acid sequence represented by SEQ ID NO: 9 in the sequence listing.
- the amino acid sequence shown in SEQ ID NO: 9 in the sequence listing was originally obtained by substituting glutamic acid for the amino acid residue at position 148 from the ⁇ terminus which was alanine. By substituting the 148th amino acid residue with glutamic acid, the state in which the switch for phosphorylation activity is turned on is maintained.
- a protein that is substantially the same as the protein having the amino acid sequence shown in SEQ ID NO: 9 in the sequence listing can also be used.
- the 148th position is glutamic acid, and substitution, deletion, insertion, addition and inversion are performed in a region other than the 148th position of glutamic acid.
- a protein having an amino acid sequence containing one or several amino acid mutations selected from the group and having a constant phosphorylation activity can also be used.
- “several” means that the permissible mutations are mutations in a range that does not significantly impair the constant phosphorylation activity.
- Introduction of a mutation that substitutes the amino acid residue at position 148 with glutamic acid for alanine force can also be performed by, for example, site-directed mutagenesis so that the amino acid at a specific site in the gene encoding the present protein is substituted. It can be obtained by modifying the base sequence.
- PKC ⁇ , KPNA1 and a candidate compound are allowed to coexist. That is, PKCC, KPNA1, and a candidate compound are brought into contact. Specifically, PKC ⁇ , KPNA1 and the candidate compound may be added to the liquid solvent prepared as described above, or the candidate cells may be added to cells expressing PKC ⁇ and KPNA1. The product may be taken in or the candidate conjugate may be expressed in the same cell.
- an inhibitory effect on the interaction is assayed, and a candidate compound that has been shown to inhibit the interaction is obtained as an inhibitor of the interaction between PKC ⁇ and KPNA1.
- Identification of whether or not the interaction was inhibited can be easily performed by comparing with appropriate controls. It is identifiable. Appropriate controls include, for example, a system for confirming that the experimental system is functioning normally, and a system in which protein interaction or no protein interaction is set in advance. By doing so, those that can indicate whether or not the unknown candidate compound has the ability to inhibit protein interaction are included.
- labeling substances such as luminescent substances, fluorescent substances, coloring substances, radioactive substances, marker genes, etc.
- labeling substances such as luminescent substances, fluorescent substances, coloring substances, radioactive substances, marker genes, etc.
- protein interaction assay method include an immunoprecipitation method, a far western method, a gel filtration method, a two-hybrid method, an energy transfer method, and a method using surface plasmon resonance.
- an appropriate control sample may be provided using the above-described method for detecting protein interaction, and an experimental system for detecting an inhibitor may be constructed.
- KPNA1 and NF- ⁇ may be used instead of the combination of PKC ⁇ and KPNA1. That is, under the condition that KPNA1 and NF- ⁇ can interact with each other, KPNA1 and NF- ⁇ candidate conjugate are allowed to coexist, and whether the interaction between KPNA1 and NF- ⁇ has occurred.
- the candidate compound that has been shown to inhibit the interaction is detected as an inhibitor.
- Other preferable conditions and the like are the same as those in (2-1) the method for detecting an inhibitor of the interaction between PKCII and KPNA1.
- the method for detecting an interaction inhibitor of the present invention is a test kit for detecting a substance that inhibits a protein interaction related to T cell activity regulation or IL2 production, and comprises an inhibitor of an interaction between PKC ⁇ and PNA1. And a kit for detecting an inhibitor of the interaction between KPNA1 and NF- ⁇ B.
- Examples of the supply sample form of PKC ⁇ , KPNA1, and NF- ⁇ include purified proteins as well as polynucleotides encoding these proteins. Incorporating this polynucleotide into an appropriate vector Thus, these proteins can be easily supplied to experiments by genetic engineering techniques. Also, provided that the interaction and function of these proteins is preserved,
- N- or C-terminal protein with another protein such as j8-galactosidase, daltathione, S-transferase II, or a peptide tag such as His tag, myc tag, or FLAG tag, can be supplied to the experiment. it can.
- another protein such as j8-galactosidase, daltathione, S-transferase II, or a peptide tag such as His tag, myc tag, or FLAG tag
- a detection kit includes a PKC II supply sample and a KPNA1 supply sample.
- the PKC II supply sample include a purified PKC II protein, a polynucleotide encoding PKC II, and the like.
- One preferred form of the test kit includes a form in which a vector containing a polynucleotide encoding PKC ⁇ is used as a PKC ⁇ supply sample, and a vector containing a polynucleotide encoding KPNA1 is used as a KPNA1 supply sample.
- the detection kit may employ various components used as an expression vector, such as a parent vector of a vector such as a plasmid, a promoter, a selection marker, and the like. Specific examples are as follows.
- Examples of the vector include plasmids derived from Escherichia coli (eg, pBR322, pBR325, pUC12, pUC13, commercially available products such as pBT Vector and pTRG Vector (manufactured by Stratagene)), and yeast-derived plasmids (eg, YEp24). , YCp50, etc.), butteriophage such as ⁇ phage, animal viruses such as retrovirus, vaccinia virus and baculovirus, as well as ⁇ ⁇ -11, ⁇ 1, pRc / CMV, pRc / RSV, pcDNA1ZNeo and the like. Further, examples of plasmids suitably used for Bacillus subtilis include pUB110, pTP5, and PC194.
- the promoter may be any promoter that is appropriate for the host cell used for gene expression.
- the host cell is Escherichia, trp promoter, lac promoter, recA promoter, ⁇ PL promoter, 1 pp promoter, T7 promoter, etc. SP02 promoter, penP promoter and the like.
- yeast examples include a PH05 promoter, a PGK promoter, a GAP promoter, and an ADH promoter.
- the host cell is an insect cell, a polyhedrin promoter, a P10 promoter and the like can be mentioned.
- examples include the SRa promoter, SV40 promoter, HIV 'LTR promoter, CMV (cytomegalovirus) promoter, and HSV- ⁇ promoter.
- the expression vector preferably has a multicloning site from the viewpoints of recombination operation, handling, and ease.
- the expression vector may optionally include a selection marker, an enhancer, a splicing signal, a cascade signal with a polymerase, an SV40 replication origin (hereinafter sometimes abbreviated as SV40ori), a terminator, and the like.
- SV40ori an SV40 replication origin
- the selectable marker include an ampicillin resistance gene (also a carbe-siline resistance gene; hereinafter may be abbreviated as Amp 1 ”) and a chloramuecole resistance gene (hereinafter abbreviated as Cam 1 ").
- T et f tetracycline resistance gene
- DHF dihydrofolate reductase
- MTX metalhotrexate
- Neo 1 neomycin resistant gene
- G418 resistance neomycin resistant gene
- a signal sequence suitable for the host cell may be added. If the host cell is a bacterium belonging to the genus Escherichia, PhoA ' When the host cell is a bacterium of the genus Bacillus, the ⁇ -amylase signal sequence, subtilisin 'signal sequence, etc. Signal sequence, SUC2 'signal sequence, etc. if the cell is an yeast, Insulin' signal sequence, interferon 'signal sequence, antibody molecule, antibody molecule if the host cell is a animal cell Etc. can be used respectively.
- the detection kit of the present invention may include a host cell suitable for expressing the expression vector.
- host cells include bacterial cells such as streptococci, streptococci, staphylococci, Escherichia coli, Streptomyces, and Bacillus subtilis; yeast, Fungal cells such as Aspergillus; insect cells such as Drosophila S2 and Spodoptera Sf9; CHO, COS, HeLa, C127, 3T3; Animal cells such as BHK, HEK293, Bows melanoma cells and blood cells; and plant cells. More preferably, host cells used in the method for detecting an inhibitor of the present invention include yeast cells, Escherichia coli cells, Bacillus subtilis cells, and mammalian cells.
- the culture of the host may be adjusted according to the type of the host and the like. There are many types of hosts, but some specific examples are as follows. For example, when culturing a transformant whose host is Escherichia or Bacillus, the culture medium used may be a liquid medium or an agar medium, in which the carbon source necessary for the growth of the transformant is contained. , Nitrogen source, inorganic substances and others.
- Examples of the carbon source include glucose, dextrin, soluble starch, and sucrose
- examples of the nitrogen source include ammonium salts, nitrates, corn steep liquor, peptone, casein, meat extract, soybean meal
- examples of inorganic or organic substances such as potato extract and inorganic salts include sodium chloride sodium, sodium dihydrogen phosphate, magnesium salt sodium, and the like.
- yeast extract, vitamins, growth promoting factors and the like may be added.
- the pH of the medium is preferably about 5-8.
- Specific examples of a suitable medium for culturing the genus Escherichia include an LB medium containing a yeast extract, tryptone, and salt (NaCl).
- an inducing agent such as, for example, isopropyl 1 thio D-galactoside may be added for efficient operation of the promoter.
- cultivation is usually performed at about 15 to 43 ° C for about 3 to 24 hours, and aeration and stirring are applied as necessary.
- cultivation is usually performed at about 30 to 40 ° C for about 6 to 24 hours, and if necessary, aeration and / or agitation are added.
- examples of the medium include a Burkholder minimum medium, an SD medium containing 0.5% casamino acid, and the like. It is preferable to adjust the pH of the medium to about 518! Culture is usually performed at about 20 ° C-35 ° C for about 24-72 hours, with aeration and / or agitation as needed.
- the culture medium When culturing an insect cell or a transformant whose host is an insect, the culture medium was immobilized in Grace's Insect Medium (Grace, TCC, Nature, 195, 788 (1962)). A mixture obtained by appropriately kneading an additive such as a serum of the strain is used. Preferably, the pH of the medium is adjusted to about 6.2-6.4. Culture is usually performed at about 27 ° C for about 3-5 days, and aeration and agitation are added as necessary.
- examples of the medium include a MEM medium containing about 5 to 20% fetal bovine serum, a DMEM medium, and an RPMI 1640 medium (The Journal of the American Medical Association, Vol. 199, 519 (1967)), 199 medium (Proceeding of the Society for the Biological Medicine, Vol. 73, L: 1950), etc. are used.
- the pH is about 6-8.
- Culture is usually performed at about 30-40 ° C for about 15-60 hours, and aeration and / or agitation are added as necessary. Also, if necessary, C O
- the kit of the present invention may be provided with other detection means used for performing the above-described detection method of the present invention.
- the kit of the present embodiment can also include reagents used for detecting the inhibition of the protein interaction.
- Reagents include qualitatively or quantitatively measurable labeling substances such as luminescent substances, fluorescent substances, coloring substances, and radioactive substances, antibody reagents for specifically detecting target substances, and experimental systems.
- Reagents such as a pH adjusting agent, a buffering agent, and an auxiliary agent such as a base material for appropriately adjusting can be appropriately selected and provided.
- the kit of the present invention may further include a container used for a detection test, a restriction enzyme, a medium for culturing host cells, and the like.
- Kits for examining the interaction between KPNA1 and NF- ⁇ K use KPNA1 and NF- ⁇ ⁇ ⁇ instead of the above combination of PKC ⁇ and KPNA1. That is, as another embodiment of the detection kit of the present invention, a KPNA1 supply sample, an NF- ⁇ supply sample, A kit for detecting an inhibitor of the interaction between KPNA1 and NF- ⁇ , comprising a means for assaying the interaction between KPNA1 and NF- ⁇ B is exemplified.
- the KPNA1 supply sample is a vector containing a polynucleotide encoding KPNA1
- the NF- ⁇ supply means is a vector containing a polynucleotide encoding NF- ⁇ .
- the other components are the same as in the above (3-1) Kit for detecting an inhibitor of the interaction between PKCC and KPNA1.
- the cDNA encoding the amino acid sequence of human PKC0 (National Center Biotechnology Information: NCBI; Accession No. NP-006248) is obtained by performing PCR on a human skeletal muscle cDNA library (Takara Bio Inc.) using type II PCR. Was.
- the sequences of the primers theta-N and theta-C used for PCR are shown in SEQ ID NO: 1 and SEQ ID NO: 2 in the sequence listing, respectively.
- the obtained DNA fragment was inserted into a mammalian cell expression vector, pcDNA3.1 / myc-HisB (Invitrogen).
- PKC ⁇ myc-His a plasmid, PKC ⁇ myc-His / pcDNA3.1, capable of expressing human PKC ⁇ as a C-terminal myc-His-tagged protein (hereinafter, PKC ⁇ myc-His) in mammalian cells was prepared. .
- the cDNA encoding the amino acid sequence of human KPNA1 (NCBI; Accession No. AAH03009) was obtained by performing PCR using a human thymus cDNA library (manufactured by Takara Bio Inc.) as type II.
- the sequences of the primers KPNA1-N and KPNA1-C used for PCR are shown in SEQ ID NO: 3 and SEQ ID NO: 4 in the sequence listing, respectively.
- the obtained DNA fragment was inserted into a mammalian cell expression vector, pCMV Tag2C (Stratagene).
- pCMV Tag2C (Stratagene).
- human KPNA 1 can be used as an N-terminal FLAG-tagged kamushi protein (hereinafter, FLAG-KPNA1) in mammalian cells.
- FLAG-KPNA1 N-terminal FLAG-tagged kamushi protein
- step 2 transfection was performed using FuGENE (Roche Diagnostics). At this time, 2 ⁇ g each of PKC ⁇ -myc-His / pcDNA3.1 and FLAG-KP NAlZpCMV (combination 1) and 2 g each of pcDN A3.1.1 / myc-HisB (vector only) as a negative control FLAG—KPNAlZpCMV (Combination 2) was used.
- the cells were further cultured in the presence of 5% CO at 37 ° CZ for 2 days.
- Each protein was transiently expressed in cells. Next, the cells were washed with ice-cooled D-PBS (manufactured by Invitrogen), and then 0.5 ml of Cell Lysis Buffer (20 mM Tris-HC1, pH 7.5 / 150 mM NaCl / ImM Na EDTA / ImM EGTA / 1% Tri
- a 10 / zl anti-FLAG M2 agarose affinity gel (manufactured by Sigma) was added to the supernatant (immunoprecipitation of FLAG-KPNAl), mixed by inversion at 4 ° C for 2 hours, and centrifuged. Agarose was recovered. The agarose was further washed four times with 0.5 ml of Cell Lysis Buffer, the SDS sample buffer was dried, boiled for 5 minutes, and the supernatant was separated by SDS-PAGE. Thereafter, immunoprecipitation of FLAG-KPNAl was detected by Western blotting using an anti-FLAG M2 monoclonal antibody (anti-FLAG M2 monoclonal antibody, Sigma).
- c Western blotting using Myc monoclonal antibody (c-Myc (9E10) Monoclonal Antibody, manufactured by SantaCruz) was used to detect whether PKC-myc-His co-precipitated! /. Note that a Hare i ECL plus western blotting kit (manufactured by Amasherm biosciences) was used.
- FIG. 1 shows the results.
- FIG. 1 shows left and right electrophoresis images, and the following samples were electrophoresed in lanes M, 1, and 2 in each electrophoresis image.
- FIG. 4 is a schematic diagram of a part of the left electrophoresis image of FIG.
- Lane 1 a sample immunoprecipitated with an anti-FLAG antibody from an extract of cells transfected with combination 1
- Lane 2 a sample immunoprecipitated with an anti-FLAG antibody from an extract of cells transfected with combination 2
- the right electrophoresis image shows that FLAG-KPNA1 was immunoprecipitated (arrow).
- the left electrophoresis image (WB; FLAG) shows that PKC ⁇ myc-His co-precipitated by immunoprecipitation of FLAG-KPNA1 (arrow in lane 1).
- the numerical value shown on the left side of each lane on the left and right is the molecular weight of the molecular weight marker (unit: kDa).
- MSN is known as a phosphorylation substrate of PKC 0 (Salvatore FP et al., (1998) The Journal of Biological Chemistry 273, 13: 7594-7603).
- PKC II a mammalian cell expression plasmid for human MSN protein, MSN-V5-His / pcDNA3.1 (Invitrogen) was used. This allows MSN to be expressed in cells as a C-terminal V5-His tagged protein (hereinafter, MSN-V5-His).
- Luciferase was used as a negative control.
- pCMV Tag2 control (Stratagene) was used. This allows Luciferase to be expressed in cells as an N-terminal FLAG-tagged cascine protein (hereinafter, FLAG-Luc).
- Proteins as substrates were expressed in cells according to the following procedure and recovered as immune complexes.
- transfection was performed using FuGENE (Roche Diagnostics).
- the transfected plasmid DNA is FLAG-KPNAl / pCMV, pCMV Tag2 control, and MSN-V5-His / pcDNA3.1, each of which is 21 each.
- the cells were further cultured in the presence of 5% CO at 37 ° C for 2 days.
- Each protein was transiently expressed in cells. Next, the cells were washed with ice-cooled D-PBS (manufactured by Invitrogen), and then 0.5 ml of Cell Lysis Buffer (20 mM Tris-HC1, pH 7.5 / 150 mM NaCl / ImM Na EDTA / ImM EGTA / 1% Tri
- FIG. 2 shows the results.
- FIG. 5 shows a schematic diagram of a part of the electrophoresis image of FIG.
- the positive control, MSN is phosphorylated by PKC ⁇ (open arrowhead), and the negative control, Luciferase, is not phosphorylated by PKC ⁇ .
- KPNA1 is phosphorylated by PKC ⁇ (solid arrowhead).
- the arrow indicates the autophosphorylation of PKC0, and the value shown on the left side of the figure is the molecular weight of the molecular weight marker (unit: kDa).
- an autophosphorylation band of PKC0 was confirmed in all lanes (molecular weight: about 83 kDa).
- the phosphorylation band was observed in the positive control MSN (molecular weight: about 71 kDa), and the phosphorylation band was not observed in the negative control Luc (molecular weight: about 62 kDa), confirming the validity of the experimental system. .
- a phosphorylation band of K PNA1 (molecular weight: about 63 kDa) was confirmed. From this, KPNA1 It was confirmed to be a phosphoric acid substrate of PKC II.
- Human NF- ⁇ is composed of ⁇ 50 and ⁇ 65 heterodimers. Human ⁇ 50 is first expressed as its precursor, pl05 (NCBI; accession number AAA36361), and then cleaved in the cell between methionine at position 436 and aspartic acid at position 437, resulting in p50. It has been known.
- the cDNA encoding the amino acid sequence of human p50 was obtained by performing PCR on a human skeletal muscle cDNA library (manufactured by TAKARA BIO INC.) With type II.
- the sequences of the primers p50-N and p50-C used for PCR to obtain p50 are shown in SEQ ID NO: 5 and SEQ ID NO: 6 in the sequence listing, respectively.
- the p50-C sequence was designed so that the termination codon TAA was added after the 436th methionine (ATG) of p105.
- cDNA encoding the amino acid sequence of human p65 (NCBI; Accession No. AAA36408) was obtained by performing PCR on a human skeletal muscle cDNA library (Takara Bio Inc.) with type III.
- the sequences of the primers p65-N and p65-C used for PCR to obtain p65 are shown in SEQ ID NO: 7 and SEQ ID NO: 8 in the sequence listing, respectively.
- the obtained DNA fragment was inserted into a mammalian cell expression vector, pCMV Tag2A (Stratagene).
- human p50 is expressed in mammalian cells as an N-terminal myc-tagged protein (hereinafter, myc-p50), and human p65 is expressed as an N-terminal myc-tagged protein (hereinafter, myc-p65).
- myc-p50 N-terminal myc-tagged protein
- myc-p65 N-terminal myc-tagged protein
- transfection was performed using FuGENE (Roche Diagnostics). At that time, 2; zg each of myc-p50ZpCMV and FLAG-KPNAlZpCMV (combination 1), 2 ⁇ g of myc-p65ZpCMV and FLAG-KPNAlZpCMV (combination 2), and 2; zg each as a negative control pCMV Tag3 control (St ratagene) and FLAG-KPNAlZpCMV (combination 3).
- the pCMV Tag3 control used in combination 3 is an expression plasmid capable of expressing Luciferase as an N-terminal myc-tagged protein (hereinafter, myc-Luc).
- the cells are further cultured in the presence of 5% CO at 37 ° C for 2 days.
- Each protein was transiently expressed in cells. Next, the cells were washed with ice-cooled D-PBS (manufactured by Invitrogen), and then 0.5 ml of Cell Lysis Buffer (20 mM Tris-HC1, pH 7.5 / 150 mM NaCl / ImM Na EDTA / ImM EGTA / 1% Tri
- the recovered cell extract was mixed with 10 a of agarose conjugated normal mouse IgG (manufactured by SantaCruz), mixed by inversion at 4 ° C for 30 minutes, and the supernatant was collected by centrifugation (Pre-clean). .
- FIG. 3 shows the results.
- FIG. 3 shows two electrophoresis images on the left and right, and the following samples were electrophoresed in lanes M, 1, 2, and 3 in each electrophoresis image.
- FIG. 6 shows a schematic diagram of a part of lanes 1 and 2 of the left electrophoresis image of FIG. Lane M: molecular weight marker
- Lane 1 a sample immunoprecipitated with anti-myc antibody from an extract of cells transfected with combination 1
- Lane 2 a sample immunoprecipitated with an anti-myc antibody from an extract of cells transfected with combination 2
- Lane 3 a sample immunoprecipitated with anti-myc antibody from an extract of cells transfected with combination 3
- the right electrophoresis image shows that immunoprecipitation of myc-p50 in lane 1, myc-p65 in lane 2, and myc-Luc in lane 3 (arrows in lanes 1, 2, and 3) .
- the left electrophoresis image shows that FLAG-KPNA1 was co-precipitated by immunoprecipitating myc-p50 in lane 1 and immunoprecipitating myc-p65 in lane 2 ( Arrowheads in lanes 1 and 2).
- the numerical value shown on the left side of each lane is the molecular weight of the molecular weight marker (unit: kDa).
- FIG. 3 Right electrophoresis image (Western blotting with c Myc (9E10) Monoclonal Monoclonal Antibody) ⁇ ⁇ ⁇ ⁇ ⁇ ⁇ As shown, combinations 1, 2, and 3 show myc-p50 (molecular weight of about 52 kDa) and myc-p65, respectively. (Molecular weight of about 65 kDa) and a band corresponding to myc-Luc (molecular weight of about 62 kDa) were detected, indicating the validity of the immunoprecipitation experiment system. On the other hand, as shown in Fig.
- Jurkat, Clone E6-1 manufactured by Dainippon Pharmaceutical Co., Ltd .; hereinafter, referred to as Jurkat cells
- Jurkat cells were used as a host cell for the reporter assay.
- Jukrkat cells are a cell line established from human acute leukemia-derived T cells, and are commonly used as model cells for T cell activation associated with antigen recognition, especially for the analysis of IL2 gene expression. It is something.
- PKC ⁇ , KPNA1 and NF- ⁇ B are expressed.
- PKC is composed of two regions, a regulatory domain and a kinase domain.
- PKC ⁇ is inactivated as a phosphorylating enzyme. This is because the pseudosubstrate region (a region having a sequence similar to the substrate sequence of PKC ⁇ ) in the regulatory domain enters the catalytic cleft of the kinase domain and inhibits kinase activity.
- the binding of lipid messengers such as diacylglycerol produced by ⁇ -cell activation to the regulatory domain causes a structural change in PKC ⁇ , and the regulatory domain is separated from the kinase domain. As a result, PKC ⁇ becomes activated as a phosphorylation enzyme, and the signal of ⁇ cell activation is transmitted.
- PKC II has a force of 706 amino acid residues.
- PKC ⁇ AE PKC ⁇ having this mutation
- IL-2 transcriptional activation occurs in ⁇ Jurkat cells overexpressing PKC ⁇ AE without stimulation such as antigen recognition (Molecular and Cellular Biology 1996 Apr; 16). (4): 1842—50.).
- the expression vector was changed from pcDNA3.1 / myc-His to pCI vector (Promega). .
- This vector incorporates an artificially created intron downstream of the enhancer / promoter of human cytomegalovirus, which allows for more stable and high-level expression of the inserted gene. Can be done.
- PKC ⁇ AE -myc-His / pcDNA3.1 and PKC0 KR-myc-HisZpcDNA3.1 is treated with restriction enzymes KpnI and PmeI to obtain PKC0AE or C-terminal myc-His-tagged PKC0AE or DNA fragments encoding KR were respectively prepared and inserted between the Kpn I site and the Pme I site of the pCI vector.
- PKC ⁇ AE-myc-HisZpCI and PKC ⁇ KR-myc-HisZpCI were obtained.
- PKC ⁇ AE and KR with the myc-His tag fused to the C-terminus were respectively expressed in Jurkat cells.
- the reporter plasmid for detecting the transcriptional activity of NF- ⁇ B is pNF- ⁇ B-Luc (Stratagen e company). This sequence is repeated 5 times upstream of the DNA encoding firefly luciferase, a sequence required for NF- ⁇ B to act as a transcriptional activating factor (5′-TGGGGAC TTTCCGC-3 ′ SEQ ID NO: 11). Is inserted. That is, the reporter plasmid pNF- ⁇ B-Luc has a sequence site to which NF- ⁇ binds (NF- ⁇ binding region) and a firefly luciferase gene serving as a reporter downstream of the NF- ⁇ binding region. It has been incorporated.
- NF- ⁇ binds to the NF- ⁇ binding region and acts as a transcriptional activation factor.
- phRL-TK promega
- the cells were further cultured for 48 hours, and the firefly luciferase activity and the Pseudomonas luciferase activity were measured using the Dual-Luciferase Reporter Assay System (Promega). Next, a correction value was calculated by dividing the firefly luciferase activity by the Pseudomonas luciferase activity.
- the correction value when PKC ⁇ 400 ng of KR-myc-His / pCI and 400 ng of pCMV Tag2 are set as 1
- the relative values of the correction values in the other combinations were calculated, and the change in the firefly luciferase activity expressed depending on the transcriptional activity of NF- ⁇ B was calculated.
- the experiment was performed independently six times, and the average value and standard deviation were also calculated.
- Fig. 7 shows the experimental results obtained by graphing the average value and the standard deviation.
- KPNA1 binds to PKCC and is phosphorylated by PKC ⁇ , and as a result, the function of NF- ⁇ B as a transcriptional activator is enhanced. Became evident.
- KPNA1 a protein that transports transcription factors, etc. into the nucleus.
- KPNA1 is more efficiently phosphorylated to form a complex with NF- ⁇ B, which transports NF- ⁇ B into the nucleus. It is thought that there is a pathway to promote the transcription of the NF- ⁇ B L2 gene translocated into the nucleus.
- the present invention can be used in the biotechnology industry and the like.
- INDUSTRIAL APPLICABILITY The present invention is suitable for the development and manufacturing industries of pharmaceuticals, biological reagents, and the like.
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AU2004264473A AU2004264473A1 (en) | 2003-08-19 | 2004-08-13 | Interaction inhibitors, method of detecting interaction inhibitor and kit for detecting interaction inhibitor |
EP04771653A EP1657305A4 (en) | 2003-08-19 | 2004-08-13 | INTERACTION INHIBITORS, METHOD FOR DETECTION OF AN INTERACTION INHIBITOR, AND KIT FOR DETECTING AN INTERACTION INHIBITOR |
US10/568,578 US20070134663A1 (en) | 2003-08-19 | 2004-08-13 | Interaction inhibitors, method of detecting interaction inhibitor and kit detecting interaction inhibitor |
JP2005513184A JPWO2005017146A1 (ja) | 2003-08-19 | 2004-08-13 | 相互作用阻害剤、相互作用阻害剤検出方法および相互作用阻害剤検出キット |
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WO2001031051A2 (en) * | 1999-10-26 | 2001-05-03 | Isis Pharmaceuticals, Inc. | Antisense modulation of protein kinase c-theta expression |
WO2003004612A2 (en) * | 2001-07-02 | 2003-01-16 | Yale University | Inhibitor of t cell activation |
WO2003054228A2 (en) * | 2001-12-21 | 2003-07-03 | Axxima Pharmaceuticals Ag | Human cellular enzymes as targets against hepatitis c virus infections |
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WO2001031051A2 (en) * | 1999-10-26 | 2001-05-03 | Isis Pharmaceuticals, Inc. | Antisense modulation of protein kinase c-theta expression |
WO2003004612A2 (en) * | 2001-07-02 | 2003-01-16 | Yale University | Inhibitor of t cell activation |
WO2003054228A2 (en) * | 2001-12-21 | 2003-07-03 | Axxima Pharmaceuticals Ag | Human cellular enzymes as targets against hepatitis c virus infections |
Non-Patent Citations (5)
Title |
---|
ABBOUSHI N. ET AL.: "Ceramide inhibits IL-2 production by preventing protein kinase C-dependent NF-(kappa)B Activation protein kinase C (theta) Regulation", J. IMMUNOL, vol. 173, no. 5, 1 September 2004 (2004-09-01), pages 3193 - 3200, XP002904127 * |
ARENDT C.W. ET AL.: "Protein kinase c-theta;: signaling from the center of the T-cell synapse", CURR OPIN IMMUNOL, vol. 14, no. 3, 2002, pages 323 - 330, XP004350482 * |
COUDRONNIERE N. ET AL.: "NF-kappa B activation induced by T cell receptor / CD 28 costimulation is mediated by protein kinase C-theta", PROC NATL ACAD SCI USA, vol. 97, no. 7, 2000, pages 3394 - 3399, XP002940087 * |
CUNNINGHAM M.D. ET AL.: "An intracellular targeted NLS peptide inhibitor of karyopherin alpha: NF-kappa B interactions", BIOCHEM BIOPHYS RES COMMUN, vol. 300, no. 2, 10 January 2003 (2003-01-10), pages 403 - 407, XP002904126 * |
See also references of EP1657305A4 * |
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