WO2003080901A1 - Use of dynamic light scattering (dls) in a method for producing macromolecular crystals - Google Patents
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Classifications
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- C—CHEMISTRY; METALLURGY
- C30—CRYSTAL GROWTH
- C30B—SINGLE-CRYSTAL GROWTH; UNIDIRECTIONAL SOLIDIFICATION OF EUTECTIC MATERIAL OR UNIDIRECTIONAL DEMIXING OF EUTECTOID MATERIAL; REFINING BY ZONE-MELTING OF MATERIAL; PRODUCTION OF A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; SINGLE CRYSTALS OR HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; AFTER-TREATMENT OF SINGLE CRYSTALS OR A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; APPARATUS THEREFOR
- C30B7/00—Single-crystal growth from solutions using solvents which are liquid at normal temperature, e.g. aqueous solutions
-
- C—CHEMISTRY; METALLURGY
- C30—CRYSTAL GROWTH
- C30B—SINGLE-CRYSTAL GROWTH; UNIDIRECTIONAL SOLIDIFICATION OF EUTECTIC MATERIAL OR UNIDIRECTIONAL DEMIXING OF EUTECTOID MATERIAL; REFINING BY ZONE-MELTING OF MATERIAL; PRODUCTION OF A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; SINGLE CRYSTALS OR HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; AFTER-TREATMENT OF SINGLE CRYSTALS OR A HOMOGENEOUS POLYCRYSTALLINE MATERIAL WITH DEFINED STRUCTURE; APPARATUS THEREFOR
- C30B29/00—Single crystals or homogeneous polycrystalline material with defined structure characterised by the material or by their shape
- C30B29/54—Organic compounds
- C30B29/58—Macromolecular compounds
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N15/00—Investigating characteristics of particles; Investigating permeability, pore-volume or surface-area of porous materials
- G01N15/02—Investigating particle size or size distribution
- G01N15/0205—Investigating particle size or size distribution by optical means
Definitions
- the present invention relates to techniques useful in optimising crystallisation of macromolecules, and their application to automated and high throughput systems.
- microbatch trials consisting of 0.7 - 2 ⁇ l drops of a mixture of protein and crystallising agents are generated by an automated liquid dispensing system and are dispensed and incubated under oil in order to prevent evaporation.
- the automated liquid dispensing system may have two modes of action: one to automatically screen numerous potential crystallisation conditions and the other for optimisation of the most promising screening conditions using a matrix survey [9,10].
- the microbatch method has established a unique way of crystallising macromolecules, and many target proteins have been successfully crystallised using it [e.g. 11,12,13].
- the ultimate way to control the crystallisation process is to separate the phases of nucleation and growth, i.e. to start the process at conditions which induce nucleation and then transfer the system to metastable conditions, which promote optimal growth.
- Methods to achieve this other than seeding involve changing the temperature [Rosenberger, Lesley] or diluting microbatch drops after incubating them for a given time at spontaneous nucleation conditions [Saridakis et al (1994) Ada Cryst D50, 293-297]. Dilution of microbatch drops showed that the optimum time for dilution was long before the appearance of the first visible microcrystals [Saridakis et al (1994) Acta Cryst D50, 293-297].
- a first aspect of the invention provides a method for producing macromolecular crystals comprising the steps
- step (v) incubating the sample for a second chosen period of time under conditions which differ from the conditions of step (ii).
- DLS Dynamic Light Scattering
- step (ii) are preferably nucleation-promoting conditions.
- the conditions of step (v) are preferably growth-promoting conditions (ie metastable conditions).
- the conditions of step (ii) and step (v) may differ in relation to one or more of temperature, concentration of the sample (for example, the sample may be diluted between steps (ii) and (v)), concentration of the solution in the equilibration reservoir (using vapour diffusion methods), or the effectiveness of a barrier to diffusion from the sample (for example changing the thickness or composition of an oil layer over the sample or over the equilibration reservoir).
- the DLS assessment may be performed essentially continuously, for example with no or only short breaks (for example 1 to 10 seconds) between periods of measurement (which may be, for example, of about 5 to 40 seconds, for example 20 seconds, duration, as described in Example 1); thus much of the incubation time of step (ii) (during which the crystallisation sample "matures") may also be used for DLS assessment.
- the invention provides a method for producing macromolecular crystals comprising the steps
- Spatial sample manipulation may be equivalent to time-determined manipulation for dynamic experiments, when, for example, one specimen diffuses into another one as for macromolecular crystal growth.
- Conditions may vary spatially and temporally in similar manners; for example concentrations may be different at different times at a given volume element, and/or may be different at different volume elements at the same time.
- Dynamic light scattering offers a size resolution of "particles" in optical transparent aqueous samples some three orders of magnitude below an optical microscope, and consequently forms a useful tool for an early, non-invasive, insitu observation of a crystallisation event, before it becomes visible with a light microscope.
- the terms "Photon correlation spectroscopy” (PCS), quasi-elastic light scattering (QELS) and DLS can be considered synonyms.
- PCS Photon correlation spectroscopy
- QELS quasi-elastic light scattering
- a laser is focussed onto the protein solution as the aggregation and nucleation processes are occurring and the light scattered by the particles within the solution, such as protein molecules or aggregates, is collected.
- the nucleation in super saturation in the sample bulk is the reason that events recorded in the scattering volume of approx.
- ACF Auto-Correlation Function
- DLS is sensitive to variations in particle size (in the range of approx. >lnm) and interactions of protein molecules in solution [Schmitz, S.K. (1990) "An Introduction to Dynamic Light Scattering by Macromolecules", Academic Press, New York; Budayova- Spano et al. J. cryst Growth 235 (2002) 547-554].
- >lnm can be much better for hard spheres. The value depends on the molecule and the sample system.
- DLS is routinely used in many labs to assess sample mono-dispersity using dilute protein samples [DArcy, A. Acta Cryst D 50, 469-471 (1994); Bergfors, T. Ch. 4 in "Crystallisation of Proteins: Techniques, Strategies and Tips” Bergfors, T. ed (International University Line, USA) 1999, 27-40; Ferre-DAmare and Burly S. K. Structure 1994 2, 357-359].
- DLS is not considered to cover turbidimetric measurements of the type described in Rosenberger et al (1993) J Crystal Growth 129, 1- 12. The methods described determine only the general extinction properties of the sample and have poor temporal and spatial resolution. Particle sizes cannot be calculated using the methods described in Rosenberger et al. DLS is characterised by detection and analysis of the temporal behaviour of the scattered light intensity fluctuations, as discussed in, for example, Georgalis & Saenger (1999) Science Progress 82(4), 271-294. Fluctuations over time periods of between about 500ns to minutes may be detected. DLS allows particle sizes to be calculated.
- a second aspect of the invention provides a method for producing macromolecular crystals comprising the steps (i) dispensing a first sample and a second sample of a solution of macromolecule and crystallising agent
- step (v) incubating the second sample for a second chosen period of time under conditions which differ from the conditions of step (ii), wherein assessment of the first sample using Dynamic Light Scattering is performed on a scattering volume of in the order of 50 ⁇ m x 50 ⁇ m, observed at an angle of between 80 and 100° , preferably 90° to the incident light, which is preferably of wavelength 689.5 nm, and/or step (v) is chosen when the assessment indicates that the distribution of calculated hydrodynamic radii has changed from at least one previous iteration of step (iii) so that a chosen proportion of the particles fall within a distinct sub-population which has a higher calculated hydrodynamic radius mode (aggregate mode) than the calculated hydrodynamic radius mode (for the population as a whole) present during at least one previous iteration of step (iii) (monomer mode); or so that there is a chosen increase in the relative number of particles falling within the said distinct sub-population when compared with the number of particles falling within the said distinct sub-population
- the scattering volume, scattering angle and wavelength indicated above have been demonstrated by the inventors to be particularly useful or convenient in selecting when to change crystallography conditions. However, it is considered that other scattering volumes, scattering angles or wavelength may also be used.
- the ACF may be analysed by inverse Laplace transformation, which delivers the critical relaxation time, which equals the inverse product of the scattering vector and the diffusion constant and a factor 2.
- the diffusion coefficient(s) of the specie(s) in solution may then be replaced in the Stokes-Einstein equation to give the hydrodynamic radii (rh), if the viscosity is known, or the viscosity (Eta) if the hydrodynamic radius is known.
- the diffusion coefficients are sufficient, but it is a straightforward step to go from them to the radii and therefore preferred to use the calculated radii, which are considered easier to interpret. It is possible to use the ACF itself in assessing when to change the conditions but it is preferred to use the inverse Laplace transformation result, calculated hydrodynamic radii or diffusion coefficients as it is considered easier to interpret these measures.
- the chosen proportion of particles ie proportion of particles falling within a distinct sub-population which has the higher calculated hydrodynamic radius mode (aggregate mode) is at least 20, 30, 40, 50, 60, 70, 80 or 90% of the total particles (by number).
- the chosen increase in the relative number of particles falling within the said distinct sub-population which has the higher calculated hydrodynamic radius mode (aggregate mode) is at least 1.5- fold, preferably, 2, 3, 5, 10, 15, 20, 30, 40, 50, 80, 100, 200, 500 or 1000- fold, for example relative to the number falling within the said subpopulation when the sample has calmed following set-up. It is not considered necessary to determine the absolute number of particles within the subpopulation either following set-up or at later time.
- crystallisation conditions may be changed when the optimum proportion or a proportion in the range of optimum proportions or optimum relative increase is reached.
- Macromolecules may be "similar" when they share features such as overall conformation (eg globular or extended), surface charge, isoelectric point or solubility characteristics.
- Similar macromolecules may preferably share extensive sequence homology (for example at least 40, 50, 60, 70, 80, or 90% amino acid or nucleotide (as appropriate) identity), but this is not essential for macromolecules to be considered similar in terms of the optimum proportion of particles, or optimum relative change in number of particles, in the higher hydrodynamic radii population when crystallisation conditions are changed. Crystal formation may be assessed by methods well known to those skilled in the art, for example microscopy or diffraction studies. The process of performing and analysing trials for determining optimum proportions as discussed above may be automated and a knowledge-based system developed to predict optimum proportions for further macromolecules.
- the calculated hydrodynamic radius either for “monomers” or “aggregates” will depend upon the size of the macromolecule, so the relevant calculated hydrodynamic radii will vary depending upon the nature of the macromolecule to be crystallised. There are monomers of say 0.4nm diameter and there are aggregates at 2000nm and there may be, for example, four size distribution classes in between. "Monomer” and “aggregate” sizes may be determined in “trial runs", for example using a machine as briefly described above. A typical "monomer” hydrodynamic radius mode for a polypeptide of about 14 to 25 kDa may be about 2nm, whilst a typical “aggregate” hydrodynamic radius mode could be about 5 to 200 nm.
- lysozyme (14.5 kDa) has a 2.1nm monomer, the dimer of which is 2.65nm (Georgalis et al.(1995) Adv. Coll. Interf. Sci. 58, 57-86).
- dimer dimers (2x22 kDa) we have ca. 3nm hydrodynamic radius (Juarez-Martinez et al.(2001) J.Cryst.Growth, 232, 119-131) whereas an assembly of nine dimers of Human Transferrin Receptor (i.e. 18x70kDa) is 16nm (Schueler et al. (1999) Biophys. J. 77, 1117-1125).
- the "aggregate" modal hydrodynamic radius will be at least 1.5, 2, preferably, 5, 10, 20, 50, 100, 1000, 10000 or more times the "monomer” modal hydrodynamic radius.
- the hydrodynamic radius of a crystal may be around 1000 000 000 000 times the monomer radius in size, but it is likely that the optimum aggregate size at which crystallisation conditions are changed would be smaller than this.
- the change of conditions is made within 1, 10, 20, 30, 40 or 50 minutes, or 1, 2 or 3 hours, of the measurement (or last of a group of measurements) which is interpreted as showing that the chosen proportion of particles being in the "aggregate" population has been reached. Still more preferably the change is made within 2 hours, most preferably within 30 minutes, still more preferably within 10, 5, 2 or 1 minutes of the relevant measurement.
- measurements are made on one sample are used to determine when to change the conditions of further (parallel) samples.
- the monitored sample and parallel samples may differ only in relation to volume and the way in which they are contained. Thus, it is preferred that the monitored sample and parallel sample are substantially identical, with the possible exception of volume and container. For example, the monitored sample and parallel sample have the same concentrations of macromolecule and crystallising agent.
- DLS is performed directly on the sample from which it is hoped to obtain crystals
- parallel samples only one of which is monitored using DLS. This may be useful in detailed optimisation of the time for changing conditions. For example, as described further in Example 1, multiple further samples may be used, with different samples being transferred to different conditions, and/or at different times based on the DLS results. Successful crystallisation protocols may then be replicated to obtain further crystals. The samples may be observed by an automated microscope and image analysis for input to the "feed-back" or knowledge-based system.
- DLS measurements may be made on several different volumes within one crystallisation sample.
- measurements may be made on two or more 50 ⁇ m-sampled volumes separated by, for example, lOO ⁇ m.
- Parallel sampling for example using two lasers of different wavelengths
- This may have the desirable effect of increasing statistical significance/reproducibility, which is needed.
- Example 1 describes experiments in which we have monitored the end results of microbatch crystallisation experiments, in which the solution is diluted to metastable conditions at various times after set up, and the results compared with changes in the size-distribution time-profiles as resolved by DLS from an identical solution, at corresponding times.
- the sample assessed by DLS is contained in a glass or plastic cuvette.
- the container needs to be highly transparent for the radiation used (at least for the portions of the container through which the radiation is required to pass) and preferably has substantially static properties in time, and temperature gradients for refractive index.
- Plastics and glasses generally are suitable materials.
- the sample may be in the form of a hanging drop, in which case a fibre-optic connector may be useful in ensuring that the sample is illuminated by the laser(s).
- Techniques described in EP 1 022 549 may be particularly useful when using birefringent materials (which includes many plastics) for the container. The techniques may allow the effects or contributions from the container to be eliminated.
- the techniques may also allow multiple volume elements, which may be in multiple samples (for example in a single multiwell plate) or within a single crystallisation sample, to be analysed in parallel, yielding output (for example calculated hydrodynamic radius data) as a function of location on the plate.
- output for example calculated hydrodynamic radius data
- individual volume elements or individual sample maturity may be assessed and individual samples ready for manipulation identified from analysis of multiple samples in parallel.
- the techniques make use of light of at least two wavelengths.
- the DLS-apparatus is able to handle a crystallisation sample in standard cuvettes of only 20 ⁇ l or less.
- the apparatus used in Example 1 may be used with sample volumes of less than about 7 ⁇ l. It is preferred that the sample volume is of less than 0.5, 1, 2, 3, 4, 5, 6, 7, 10, 15, 20 or 30 ⁇ l.
- the smaller volumes may be more economical with possibly scarce macromolecules, whilst larger volumes may give more reliable data.
- Handling difficulties may mean that volumes of at least 1 ⁇ l are preferred._There is a theoretical limit, when the Brownian motion of the particles is disturbed by the container wall. Previous experiments indicate that this is the case when the dimension of the container reaches 10 or 20 times the particle diameter.
- DIMINIGON-A (Dierks and Partner, Hamburg, Germany) may be particularly suitable for performing methods of the invention.
- the macromolecule may be any macromolecule, but it is preferred if it is a biological macromolecule.
- the biological macromolecule may be any biological macromolecule including nucleic acids, complex polysaccharides and viruses.
- the biological macromolecules are polypeptides.
- a polypeptide comprises at least one chain of amino acid residues which are covalently joined by peptides bonds.
- a polypeptide chain may have any number of amino acid residues, preferably at least two, more preferably at least 100, 500, 1000 or 2000.
- the polypeptide chain may have more than 2000 residues.
- a polypeptide may contain residues in the chain which are unusual or artificial, and may comprise non-peptide bonds such as disulphide bonds.
- the residues may be further modified, for example to include a phosphate group or a sugar chain (eg an oligosaccharide) or a lipid moiety.
- polypeptide includes glycoproteins and lipoproteins as well as other post- translationally modified polypeptides.
- a polypeptide may comprise more than one chain (for example, two chains linked by a disulphide bond between the sulphur in the side chain of cysteine residues), and may further comprise inorganic or organic co-factors or groups. Such modifications and additions are included within the term "polypeptide".
- Crystallisation agents are known in the art and the composition may be optimised according to the nature of the macromolecule to be crystallised.
- Typical crystallisation agents include salt(s) and buff er(s).
- the crystallisation agent and macromolecule may be dispensed at the same time, or may be dispensed separately or sequentially in any order.
- the crystallisation agent and macromolecule may be dispensed under oil or may subsequently be covered by oil (for example light paraffin oil; BDH, UK).
- oil for example light paraffin oil; BDH, UK.
- both the monitored sample and the parallel sample(s) may be covered by (ie dispensed under or subsequently covered by) oil, so that the rate of change of concentration of the monitored sample and the parallel sample(s) are effectively equal (ie within about 20, 10, or 5%).
- the rate of change may be negligible.
- negligible we mean the evaporation from the sample drop under the oil is undetectable over a period of at least a day, preferably over a period of at least 2 days, or 5 days or a week.
- negligible evaporation is a loss of water from a solution which is sufficiently small that it cannot be detected after a period of at least two weeks or 1 month or 2 months or 3 months.
- Evaporation from the sample drop may be judged by any suitable means, including by assessment of the size of the sample drop, or by the appearance of dryness.
- the oil may be any suitable liquid oil.
- the oil is of a density lower than that of the macromolecule/crystallisation agent solution.
- the oil is preferably one which is used to overlay a crystallisation drop. If the oil were denser than the liquid in the crystallisation drop, it would fail to "sit" on top of the drop. Preferably, the oil has a density of around 0.84 g cm "3 . Furthermore it is preferred if the oil dispensed by the system is one which can act as an inert sealant and does not interact with crystallisation trials, for example, one that does not cause precipitation. Hence, it is preferred if the oil consists of or comprises paraffin. More preferably the oil consists of paraffin light, a purified mixture of liquid saturated hydrocarbons obtained from petroleum. A suitable paraffin is one such as is available from Hampton Research, CA 92677-3913 USA under catalogue no HR3-411.
- the concentration of the macromolecule solution prior at the start of the incubation of step (ii) is undersaturated or metastable.
- the concentration of the solution is outside the nucleation zone of the phase diagram of that solution. It is preferred that during the incubation of step (ii) the concentration of the macromolecule solution increases (for example by evaporation of the solvent from the solution) so that the concentration of the solution reaches a concentration within the nucleation zone.
- DLS is used to detect when nucleation has occurred. Once nucleation has occurred, the conditions under which the solution is incubated are changed.
- the thickness of the layer of oil covering the crystallisation sample may be increased, as described in GB 0108289.0 and Chayen, Ada Crst D, submitted.
- a layer of oil on the reservoir may be added or thickened, as described in Chayen (1997) J Appl Cryst 30, 198-202 or D'Arcy et al. (1996) J. Crystal Growth 168, 175-180.
- the paraffin oil layer is less than about 3.5 mm (for example between 0.7 to 1.2 mm), the layer will allow evaporation of the solvent (for example water) from the solution of the macromolecule (or from the reservoir, as appropriate) because the thickness of the oil layer is insufficient to render the evaporation negligible.
- the thickness of the layer of oil at which evaporation ceases to be negligible is less than 3.5mm.
- the sample may be diluted by the addition of further liquid, for example solvent, for example water or aqueous buffer solution, which may also comprise further crystallisation agent, but which preferably does not comprise further macromolecule, to the sample.
- further liquid for example solvent, for example water or aqueous buffer solution, which may also comprise further crystallisation agent, but which preferably does not comprise further macromolecule, to the sample.
- the sample may be transferred to conditions under which further solvent enters the sample by vapour diffusion. Dilution by the addition of a volume of between about 5 and 15% of the sample volume prior to the dilution may be appropriate.
- a reduction in the rate of evaporation may be suitable when the initial sample (ie as set up) is in the metastable zone.
- the initial sample is in the supersaturated zone (ie as set up)
- dilution of the sample is preferred.
- Alternative or further changes in conditions may include addition of material, for example the same or other macromolecules, or application of physical parameters such as voltages, temperture cycling. It may also be desirable to make such changes when stagnation of nucleation or crystal growth is detected.
- the automated liquid dispensing system may be any suitable dispensing system, including the IMP AX and Oryx 6 systems available from Douglas Instruments, Hungerford, Berks, UK, for example adapted to be capable of dispensing oil.
- the automated liquid dispensing system and DLS measuring apparatus are integrated such that DLS measurements and addition of liquid (for example solvent and/or oil) may be performed by an integrated machine.
- DLS measurements and addition of liquid for example solvent and/or oil
- a whole microtitre plate (or multiple microtitre plates) of samples may be read, followed by solvent and/or oil being added to samples which had reached the necessary degree of nucleation.
- the microtitre plase may be continuously monitered by a combined optical/micro-dispenser unit.
- a third aspect of the invention provides a use of a Dynamic Light Scattering measuring apparatus in the method of the first or second aspect of the invention.
- the DLS measuring apparatus is preferably a DIMINIGON-A apparatus.
- the DLS measuring apparatus may preferably comprise two or more lasers suitable for producing light of different wavelengths, as discussed in EP 1 022 549.
- a fourth aspect of the invention provides a use of an automated liquid dispensing system in a method of the first or second aspect of the invention.
- the method preferably comprises the step of, on the basis of the assessment, adding liquid and/or oil to the sample using the automated liquid dispensing system.
- the automated liquid dispensing system is preferably an Oryx 6 or IMP AX system.
- FIG. 1 DLS measurements with Trypsin. The size of the species is displayed on the Y axis and successive measurements in the series are spread along the X axis. Increasing brightness represents the relative change of each species contained in the solution as a function of time. The brightness scale is "normalised” with the most numerous species at a given time being assigned the maximum value of 1.
- DLS apparatus DIMINIGON-A , Dierks and Partner, Hamburg, Germany
- software package also commercially available from the same entity was used following the DLS-system description as briefly given in Dierks et al (1999) Grafe 's Arch Gin Exp Ophthamol 236, 18-23 and the references mentioned therein.
- the solid state laser with 30mW, lasing at 689.5nm is temperature controlled at room temperature with an accuracy of approx. +/-0.05 ° C and illuminates a scattering volume spanned by receiver and transmitter collimators to yield a 50 ⁇ m x 50 ⁇ m sized scattering volume observed for data presented here at an angle of 90°.
- the mono-mode receiver is fed into a photo-multiplier tube with a quantum efficiency ranging from 5 to 7 % at this wavelength, which delivers via pulse shaper the signals to a real-time correlator with a sampling time structure starting at 800ns and a sampling time structure spanning 9 decades.
- a computer system accomplishes all operations such as temperature stabilization of cuvette holders, data evaluation and selection of measurement times, which are mostly 20 to 80s for the data presented here.
- the error estimates on the data quality are fully compliant with accuracies delivered in Ref. Dieckmann & Dierks (2000) Conf Mat & Nanotec Instrumentation for material synthesis and near field optical microscopy SPIE 4098, 11-25.
- the instrument is designed to take reliable measurements from as little as 10 or 20-30 ⁇ l of solution, contained in a glass cuvette which can be covered with light paraffin oil, thus closely mimicking the conditions of a microbatch experiment.
- the software uses CONTIN (e.g. Provencher (1982) Computer Phys Comm 21, 229-242) to analyse the Auto-Correlation Function (ACF) of the intensity fluctuation, and is equipped with a variety of possibilities for displaying and evaluating data, some of which are shown in the Results.
- CONTIN e.g. Provencher (1982) Computer Phys Comm 21, 229-242
- ACF Auto-Correlation Function
- porcine pancreatic trypsin type IX catalog. no. T-0134
- thaumatin from Thaumatococcus danielii T-7638
- Sigma L-6876 thaumatin from Thaumatococcus danielii
- microbatch drops were also diluted (two drops per interval) with filtered buffer solution, to metastable conditions.
- Metastable conditions had been determined beforehand for each protein; by establishing the super solubility curve around published conditions (Chayen et al (2001) J. Mol Biol. 312, 591-595).
- a super solubility curve separates the spontaneous nucleation zone of a crystallisation phase diagram from the zone at which the solution remains clear (metastable + unsaturated).
- the metastable zone is then the area of conditions below the super solubility curve, where nuclei transferred from the spontaneous nucleation zone (e.g. by dilution) will continue to grow.
- the method is described in more detail in Saridakis et al.
- microbatch drops set up in identical conditions remained clear when diluted between 30' and 2h30' after set up and yielded single crystals larger than those in the undiluted controls when diluted between 4 and 5h30' after set up. Those diluted later than 6 hours after set up yielded small crystals, no better (often worse) than those in the controls.
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- Chemical & Material Sciences (AREA)
- Engineering & Computer Science (AREA)
- Crystallography & Structural Chemistry (AREA)
- Materials Engineering (AREA)
- Metallurgy (AREA)
- Organic Chemistry (AREA)
- Peptides Or Proteins (AREA)
- Enzymes And Modification Thereof (AREA)
Abstract
Description
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AU2003214458A AU2003214458A1 (en) | 2002-03-22 | 2003-03-20 | Use of dynamic light scattering (dls) in a method for producing macromolecular crystals |
EP03710032A EP1495165A1 (en) | 2002-03-22 | 2003-03-20 | Use of dynamic light scattering (dls) in a method for producing macromolecular crystals |
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GBGB0206759.3A GB0206759D0 (en) | 2002-03-22 | 2002-03-22 | Crystal optimisation technique |
GB0206759.3 | 2002-03-22 |
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Cited By (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1603068A2 (en) * | 2004-02-05 | 2005-12-07 | RiNA Netzwerk RNA-Technologien GmbH | Process for monitoring fabrication of crystals of biomolecules |
EP2588649B1 (en) * | 2010-07-01 | 2016-04-20 | Xtal Concepts GmbH | Apparatus and method to control crystallization of macromolecules |
-
2002
- 2002-03-22 GB GBGB0206759.3A patent/GB0206759D0/en not_active Ceased
-
2003
- 2003-03-20 AU AU2003214458A patent/AU2003214458A1/en not_active Abandoned
- 2003-03-20 EP EP03710032A patent/EP1495165A1/en not_active Withdrawn
- 2003-03-20 WO PCT/GB2003/001347 patent/WO2003080901A1/en not_active Application Discontinuation
Non-Patent Citations (6)
Title |
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BERNSTEIN BRADLEY E ET AL: "The importance of dynamic light scattering in obtaining multiple crystal forms of Trypanosoma brucei PGK.", PROTEIN SCIENCE, vol. 7, no. 2, February 1998 (1998-02-01), pages 504 - 507, XP009014526, ISSN: 0961-8368 * |
FERRÉ-D'AMARÉ A R ET AL: "Use of dynamic light scattering to assess crystallizability of macromolecules and macromolecular assemblies.", STRUCTURE (LONDON, ENGLAND) ENGLAND 15 MAY 1994, vol. 2, no. 5, 15 May 1994 (1994-05-15), pages 357 - 359, XP009014527, ISSN: 0969-2126 * |
HABEL JEFF E ET AL: "Dynamic light-scattering analysis of full-length human RPA14/32 dimer: Purification, crystallization and self-association.", ACTA CRYSTALLOGRAPHICA SECTION D BIOLOGICAL CRYSTALLOGRAPHY, vol. 57, no. 2, February 2001 (2001-02-01), pages 254 - 259, XP009014524, ISSN: 0907-4449 * |
SARIDAKIS E ET AL: "SEPARATING NUCLEATION AND GROWTH IN PROTEIN CRYSTALLIZATION USING DYNAMIC LIGHT SCATTERING", ACTA CRYSTALLOGRAPHICA SECTION D: BIOLOGICAL CRYSTALLOGRAPHY, MUNKSGAARD PUBLISHERS LTD. COPENHAGEN, DK, vol. 58, no. 10, PART 1, October 2002 (2002-10-01), pages 1597 - 1600, XP009013219, ISSN: 0907-4449 * |
SARIDAKIS EMMANUEL ET AL: "Improving protein crystal quality by decoupling nucleation and growth in vapor diffusion.", PROTEIN SCIENCE, vol. 9, no. 4, April 2000 (2000-04-01), pages 755 - 757, XP009010758, ISSN: 0961-8368 * |
WILSON W W: "MONITORING CRYSTALLIZATION EXPERIMENTS USING DYNAMIC LIGHT SCATTERING ASSAYING AND MONITORING PROTEIN CRYSTALLIZATION IN SOLUTION", METHODS (ORLANDO), vol. 1, no. 1, 1990, pages 110 - 117, XP009014544, ISSN: 1046-2023 * |
Cited By (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP1603068A2 (en) * | 2004-02-05 | 2005-12-07 | RiNA Netzwerk RNA-Technologien GmbH | Process for monitoring fabrication of crystals of biomolecules |
EP1603068A3 (en) * | 2004-02-05 | 2006-02-22 | RiNA Netzwerk RNA-Technologien GmbH | Process for monitoring fabrication of crystals of biomolecules |
EP2588649B1 (en) * | 2010-07-01 | 2016-04-20 | Xtal Concepts GmbH | Apparatus and method to control crystallization of macromolecules |
Also Published As
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AU2003214458A1 (en) | 2003-10-08 |
GB0206759D0 (en) | 2002-05-01 |
EP1495165A1 (en) | 2005-01-12 |
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