WO2003046217A3 - Universal dna chip, method for making same, and uses thereof - Google Patents

Universal dna chip, method for making same, and uses thereof Download PDF

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Publication number
WO2003046217A3
WO2003046217A3 PCT/FR2002/004005 FR0204005W WO03046217A3 WO 2003046217 A3 WO2003046217 A3 WO 2003046217A3 FR 0204005 W FR0204005 W FR 0204005W WO 03046217 A3 WO03046217 A3 WO 03046217A3
Authority
WO
WIPO (PCT)
Prior art keywords
chip
sequence
probes
dna
organism
Prior art date
Application number
PCT/FR2002/004005
Other languages
French (fr)
Other versions
WO2003046217A2 (en
Inventor
Pierre Taberlet
Original Assignee
Commissariat Energie Atomique
Centre Nat Rech Scient
Univ Joseph Fourier
Pierre Taberlet
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Commissariat Energie Atomique, Centre Nat Rech Scient, Univ Joseph Fourier, Pierre Taberlet filed Critical Commissariat Energie Atomique
Priority to AU2002364792A priority Critical patent/AU2002364792A1/en
Publication of WO2003046217A2 publication Critical patent/WO2003046217A2/en
Publication of WO2003046217A3 publication Critical patent/WO2003046217A3/en

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C12Q1/683—Hybridisation assays for detection of mutation or polymorphism involving restriction enzymes, e.g. restriction fragment length polymorphism [RFLP]
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates
    • C12Q1/6855—Ligating adaptors

Abstract

The invention concerns a universal deoxyribonucleic acid (DNA) chip, a method for making a genetic print with said chip, and various uses of said chip. The inventive DNA chip is a hybridization chip of a nucleic fragment collection extracted from an organism comprising a support whereon is fixed an ordered array of nucleic acid probes, said probes including first and second sequence parts, the first sequence being constant from one probe to another and at least complementary to the remainder of a sequence of a specific restriction site, and the second part, adjacent to said first sequence part being variable from one probe to another and consisting of specific combinations of nitrogenous bases selected such that the ordered array of probes comprises the probes capable of specific hybridization with the various fragments of said collection nucleic acid. The inventive chip enables to make a genetic print of the organism, and can be useful for identifying the sex, race, variety, species and the like of an individual from his DNA sample.
PCT/FR2002/004005 2001-11-26 2002-11-22 Universal dna chip, method for making same, and uses thereof WO2003046217A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU2002364792A AU2002364792A1 (en) 2001-11-26 2002-11-22 Universal dna chip, method for making same, and uses thereof

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
FR0115265A FR2832730A1 (en) 2001-11-26 2001-11-26 Preparing genetic fingerprint, useful e.g. for identifying an individual animal, plant or microorganism, using a universal array of hybridization probes
FR01/15265 2001-11-26

Publications (2)

Publication Number Publication Date
WO2003046217A2 WO2003046217A2 (en) 2003-06-05
WO2003046217A3 true WO2003046217A3 (en) 2003-12-18

Family

ID=8869788

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/FR2002/004005 WO2003046217A2 (en) 2001-11-26 2002-11-22 Universal dna chip, method for making same, and uses thereof

Country Status (3)

Country Link
AU (1) AU2002364792A1 (en)
FR (1) FR2832730A1 (en)
WO (1) WO2003046217A2 (en)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN110033828B (en) * 2019-04-03 2021-06-18 北京各色科技有限公司 Chip detection DNA data-based gender judgment method

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5710000A (en) * 1994-09-16 1998-01-20 Affymetrix, Inc. Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping
US6258539B1 (en) * 1998-08-17 2001-07-10 The Perkin-Elmer Corporation Restriction enzyme mediated adapter
WO2001049882A2 (en) * 1999-12-29 2001-07-12 Keygene N.V. METHOD FOR GENERATING OLIGONUCLEOTIDES, IN PARTICULAR FOR THE DETECTION OF AMPLIFIED RESTRICTION FRAGMENTS OBTAINED USING AFLP$m(3)

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5710000A (en) * 1994-09-16 1998-01-20 Affymetrix, Inc. Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping
US6258539B1 (en) * 1998-08-17 2001-07-10 The Perkin-Elmer Corporation Restriction enzyme mediated adapter
WO2001049882A2 (en) * 1999-12-29 2001-07-12 Keygene N.V. METHOD FOR GENERATING OLIGONUCLEOTIDES, IN PARTICULAR FOR THE DETECTION OF AMPLIFIED RESTRICTION FRAGMENTS OBTAINED USING AFLP$m(3)

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
JACCOUD D ET AL: "Diversity arrays: a solid state technology for sequence information independent genotyping.", NUCLEIC ACIDS RESEARCH. ENGLAND 15 FEB 2001, vol. 29, no. 4, 15 February 2001 (2001-02-15), pages E25, XP002221868, ISSN: 1362-4962 *
MIRZABEKOV A D: "DNA SEQUENCING BY HYBRIDIZATION -A MEGASEQUENCING METHOD AND A DIAGNOSTIC TOOL?", TRENDS IN BIOTECHNOLOGY, ELSEVIER, AMSTERDAM, NL, vol. 12, no. 1, 1994, pages 27 - 32, XP000670232, ISSN: 0167-7799 *

Also Published As

Publication number Publication date
WO2003046217A2 (en) 2003-06-05
FR2832730A1 (en) 2003-05-30
AU2002364792A1 (en) 2003-06-10

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