WO2002085859A1 - HETEROARYL UREAS CONTAINING NITROGEN HETERO-ATOMS AS p38 KINASE INHIBITORS - Google Patents

HETEROARYL UREAS CONTAINING NITROGEN HETERO-ATOMS AS p38 KINASE INHIBITORS Download PDF

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WO2002085859A1
WO2002085859A1 PCT/US2002/012064 US0212064W WO02085859A1 WO 2002085859 A1 WO2002085859 A1 WO 2002085859A1 US 0212064 W US0212064 W US 0212064W WO 02085859 A1 WO02085859 A1 WO 02085859A1
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WIPO (PCT)
Prior art keywords
substituted
halo
group
per
alkyl
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PCT/US2002/012064
Other languages
French (fr)
Inventor
Jacques Dumas
Bernd Riedl
Uday Khire
Robert N. Sibley
Holia Hatoum-Mokdad
Mary-Katherine Monahan
David E. Gunn
Timothy B. Lowinger
William J. Scott
Roger A. Smith
Jill E. Wood
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Bayer Corporation
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Priority to JP2002583386A priority Critical patent/JP4359817B2/en
Priority to MXPA03009649A priority patent/MXPA03009649A/en
Priority to EP02725709A priority patent/EP1379507B1/en
Priority to CA2443952A priority patent/CA2443952C/en
Priority to AT02725709T priority patent/ATE520663T1/en
Publication of WO2002085859A1 publication Critical patent/WO2002085859A1/en
Priority to HK04105147.7A priority patent/HK1062440A1/en

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    • C07ORGANIC CHEMISTRY
    • C07DHETEROCYCLIC COMPOUNDS
    • C07D213/00Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members
    • C07D213/02Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members
    • C07D213/04Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom
    • C07D213/60Heterocyclic compounds containing six-membered rings, not condensed with other rings, with one nitrogen atom as the only ring hetero atom and three or more double bonds between ring members or between ring members and non-ring members having three double bonds between ring members or between ring members and non-ring members having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
    • C07D213/72Nitrogen atoms
    • C07D213/75Amino or imino radicals, acylated by carboxylic or carbonic acids, or by sulfur or nitrogen analogues thereof, e.g. carbamates
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    • C07D215/02Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom
    • C07D215/16Heterocyclic compounds containing quinoline or hydrogenated quinoline ring systems having no bond between the ring nitrogen atom and a non-ring member or having only hydrogen atoms or carbon atoms directly attached to the ring nitrogen atom with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to ring carbon atoms
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    • C07D401/00Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom
    • C07D401/02Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings
    • C07D401/12Heterocyclic compounds containing two or more hetero rings, having nitrogen atoms as the only ring hetero atoms, at least one ring being a six-membered ring with only one nitrogen atom containing two hetero rings linked by a chain containing hetero atoms as chain links
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Definitions

  • This invention relates to the use of a group of heteroaryl ureas containing nitrogen hetero atoms in treating cytokine mediated diseases and proteolytic enzyme ' mediated diseases, and pharmaceutical compositions for use in such therapy.
  • effector molecules which are critical for the progression of rheumatoid arthritis are pro-inflammatory cytokines and tissue degrading proteases. Recently, a family of kinases was described which is mstrumental in controlling the transcription and translation of the structural genes coding for these effector molecules.
  • the mitogen-activated protein (MAP) kinase family is made up of a series of structurally related proline-directed serine/threonine kinases which are activated either by growth factors (such as EGF) and phorbol esters (ERK), or by IL-1, TNF ⁇ or stress (p38, INK).
  • the MAP kinases are responsible for the activation of a wide variety of transcription factors and proteins involved in transcriptional control of cytokine production.
  • a pair of novel protein kinases involved in the regulation of cytokine synthesis was recently described by a group from SmithKline Beecham (Lee et al. Nature 1994, 372, 739).
  • CSACDSs cytokine suppressive anti-inflammatory drugs
  • Inhibition of p38 has been shown to inhibit both cytokine production (eg., TNF ⁇ , IL-1, JX-6, E -8) and proteolytic enzyme production (eg., MMP-1, MMP-3) in vitro and/or in vivo.
  • cytokine production eg., TNF ⁇ , IL-1, JX-6, E -8
  • proteolytic enzyme production eg., MMP-1, MMP-3
  • TNF ⁇ production and/or signaling have linked TNF ⁇ production and/or signaling to a number of diseases including rheumatoid arthritis (Maini. J. Royal Coll. Physicians London 1996, 30, 344).
  • excessive levels of TNF ⁇ have been implicated in a wide variety of inflammatory and/or immunomodulatory diseases, including acute rheumatic fever (Yegin et al. Lancet 1997, 349, 170), bone resorption (Pacifici et al. J. Clin. Endocrinol. Metabol. 1997, 82, 29), postmenopausal osteoperosis (Pacifici et al. J. Bone Mineral Res. 1996, 11, 1043), sepsis (Blackwell et al. Br. J. Anaesth.
  • TNF ⁇ levels have also been related to host-versus-graft reactions (Piguet et al. Immunol. Ser. 1992, 56, 409) including ischemia reperfusion injury (Colletti et al. J. Clin. Invest. 1989, 85, 1333) and allograft rejections including those of the kidney (Maury et al. J. Exp. Med.
  • liver Imagawa et al. Transplantation 1990, 50, 219
  • heart Boiling et al. Transplantation 1992, 53, 283
  • skin Step et al. Transplant. Proc. 1990, 22, 1924
  • lung allograft rejection Grossman et al. Immunol. Allergy Clin. N. Am.
  • TNF ⁇ has also been linked to infectious diseases (review: Beutier et al. Crit. Care Med. 1993, 21, 5423; Degre. Biotherapy 1996, 8, 219) including tuberculosis (Rook et al. Med. Malad. Infect. 1996, 26, 904), Helicobacter pylori infection during peptic ulcer disease (Beales et al.
  • p38 inhibitors will be useful in treatment of the above listed diseases.
  • a number of diseases are thought to be mediated by excess or undesired matrix- destroying metalloprotease (MMP) activity or by an imbalance in the ratio of the MMPs to the tissue inhibitors of metalloproteinases (TIMPs). These include osteoarthritis (Woessner et al.
  • Inhibitors of p38 are active in animal models of TNF ⁇ production, including a muirne lipopolysaccharide (LPS) model of TNF ⁇ production. Inhibitors of p38 are active in a number of standard animal models of inflammatory diseases, including carrageenan-induced edema in the rat paw, arachadonic acid-induced edema in the rat paw, arachadonic acid-induced peritonitis in the mouse, fetal rat long bone resorption, murine type II collagen-induced arthritis, and Fruend's adjuvant-induced arthritis in the rat. Thus, inhibitors of p38 will be useful in treating diseases mediated by one or more of the above-mentioned cytokines and/or proteolytic enzymes.
  • This invention provides compounds, generally described as heteroaryl ureas containing nitrogen hetero atoms, including pyridine, quinoline and isoquinoline. ureas, which inhibit p38 mediated events and thus inhibit the production of cytokines (such as TNF ⁇ , IL-1 and IL-8) and proteolytic enzymes (such as MMP-1 and MMP-3).
  • the invention also provides compositions which contain heteroaryl ureas and a method of treating a cytokine mediated disease state in humans or mammals with heteroaryl ureas, wherein the cytokine is one whose production is affected by p38. Examples of such cytokines include, but are not limited to TNF ⁇ , EL-1 and IL-8.
  • the invention also provides a method of treating a protease mediated disease state; in Jiumans or mammals, wherein the protease is one whose production is affected by p38, e.g. disease states mediated by one or more cytokines or proteolytic enzymes produced and/or activated by a p38 mediated process.
  • proteases include, but are not limited to collagenase (MMP-1) and stromelysin (MMP-3).
  • these compounds are useful therapeutic agents for such acute and chronic inflammatory and/or immunomodulatory diseases as rheumatoid arthritis, osteoarthritis, septic arthritis, rheumatic fever, bone resorption, postmenopausal osteoperosis, sepsis, gram negative sepsis, septic shock, endotoxic shock, toxic shock syndrome, systemic inflammatory response syndrome, inflammatory bowel diseases including Crohn's disease and ulcerative colitis, Jarisch-Herxheimer reactions, asthma, adult respiratory distress syndrome, acute pulmonary fibrotic diseases, pulmonary sarcoidosis, allergic respiratory diseases, silicosis, coal worker's pneumoconiosis, alveolar injury, hepatic failure, liver disease during acute inflammation, severe alcoholic hepatitis, malaria including Plasmodium falciparum malaria and cerebral malaria, non- ' insulin-dependent diabetes mellitus (NLODM), congestive heart failure, damage following heart disease, atherosclerosis, Alzheimer's disease, acute
  • lung allograft rejection including chronic lung allograft rejection (obliterative bronchitis) as well as complications due to total hip replacement, and infectious diseases including tuberculosis, Helicobacter pylori infection during peptic ulcer disease, Chaga's disease resulting from Trypanosoma cruzi infection, effects of Shiga-like toxin resulting from E.
  • the present invention therefore, provides hetaryl urea compounds containing nitrogen hetero-atoms, and compositions which comprise hetaryl urea compounds containing nitrogen heteroatoms and a method for treating of p38-mediated disease states in humans or mammals, e.g., disease states mediated by one or more cytokines or proteolytic enzymes produced and/or activated by a p38 mediated process.
  • a compound of formula I, or a pharmaceutically acceptable salt thereof is administered, A - D - B (I) .
  • D is -NH-C(O)-NH-
  • A is a substituted or unsubstituted pyridyl, quinolinyl or isoquinoliyl group
  • B is a substituted or unsubstituted, up to tricyclic aryl or heteroaryl moiety of up to 50 carbon atoms with a cyclic stmcture bound directly to D containing at least 5 members with 0-4 members of the group consisting of nitrogen, oxygen and sulfur.
  • the moiety B is preferably either a substituted or unsubstituted bridged cyclic stmcture of up to 30 carbon atoms of the formula -L- ML 1 ) ⁇ a substituted or unsubstituted 6 member cyclic aryl moiety or hetaryl moiety or a substituted or unsubstituted 2-3 fused ring stmcture (aryl, hetaryl or both).
  • B can be phenyl, substituted phenyl, napthyl substituted napthyl, pyridinyl, substituted pyridinyl, pyrimidinyl, substituted pyrimidinyl, quinolinyl, substituted quinolinyl, isoquinolinyl, substituted isoquinolinyl or of the formula -L( L l ) q .
  • L in the formula -L ⁇ ML ⁇ q is a 5 or 6 membered cyclic stmcture bond directly to D, L 1 is a cyclic moiety of at least 5 members,
  • M is a bridging group having at least one atom and q is an integer of 1-3.
  • Each cyclic stmcture of L and L 1 contains from 0-4 members of the group consisting of N, O and S.
  • the substituents for the groups of A are preferably selected from the group consisting of halogen, up to per-halo, and Wn, where n is 0-3 and each W is independently selected from the group consisting of C ⁇ o alkyl, C ⁇ o alkoxy, C . ⁇ o cycloalkyl having at least five cyclic members and 0-3 heteroatoms, C 2 . 10 alkenyl, C O alkenoyl, substituted C MO alkyl, substituted C O alkoxy, a substituted C 3 .
  • W is a substituted group, it is substituted by halogen, up to per halo, or by one or more substituents independently selected from the group consiting of -CN, -CO 2 R 7 , -C(O)NR 7 R 7' , -C(O)-R 7 , -NO 2 , -OR 7 , -SR 7 , -NR 7 R 7' , -NR 7 C(O)OR 7' , - NR 7 C(O)R 7' with each R 7 and R 7 independently as defined above.
  • each substituents are selected from the group consisting of halogen, up to per-halo, and J n , where n is O-3 " and " each" J is independently selected from the group consisting of -CN, -CO 2 R 7 , -C(O)NR 7 R 7' , -C(O)-R 7 , -NO 2 , -OR 7 , -SR 7 , - NR 7 R 7' , -NR 7 C(O)OR 7' , -NR 7 C(O)R 7' , with each R 7 and R 7' independently as defined above , C MO alkyl, C M O alkoxy, C 3 .
  • J is a substituted group, it is substituted by halogen, up to per halo, or by one or more substituents independently selected from the group consisting of -CN, - CO 2 R 7 , -C(O)-R 7 , -C(O)NR 7 R 7' , -OR 7 , -SR 7 , -NR 7 R 7' , -NO 2 , -NR 7 C(O)R 7' , and - NR 7 C(O)OR 7' ; with each R 7 and R 7' independently as defined above for W.
  • Q is preferably a single bond, -O-, -S-, -N(R 7 )-, -(CH 2 )m-, -
  • Ar is a 5- or 6-member aromatic stmcture.
  • This aromatic stmcture of Ar a) contains 0-2 members selected from the group consisting of nitrogen, oxygen and sulfur, b) is optionally substituted by halogen, up to per-halo, and c) is optionally substituted by Z nl , wherein nl is 0 to 3 and each Z is independently selected from the group consisting of -CN, -NO 2 , -OR 7 , - SR 7 , -NR 7 R 7' , -NR 7 C(O)OR 7' , -NR 7 C(O)R 7' , with each R 7 and R 7' independently as defined above for W, C O -alkyl-,-.
  • A is a substituted pyridyl, substituted quinolinyl or isoquinolinyl group
  • A is preferably substituted 1 .to 3 times by 1 or more substituents selected from the group consisting of-CN, halogen, CrC 10 alkyl, Ci-Cio alkoxy, -OH, up to per halo substituted
  • L 1 can be substituted by the substituents -C(O)R a , - C(NR a )R b , -C(O)NR a R b , -SO 2 NR a R b , -and -SO 2 R a wherein each R a and R are independently hydrogen or a carbon based moiety of up to 24 carbon atoms, optionally containing heteroatoms selected from N, S and O, and optionally substituted by halogen.
  • R a and R b preferably are each, independently, CM O alkyl, C O alkoxy, C 3 . 10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O, C 2 - 10 alkenyl, C MO alkenoyl, C 6 -u aryl, C 3 . 12 hetaryl having 1-3 heteroatoms selected from N, S and O, C 7 .
  • R a and/or R are a substituted group, they are substituted by halogen up to per halo hydroxy, C MO alkyl, C 3 . 12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C 3 . 12 hetaryl having 1-3 heteroatoms selected from N, S and O, C MO alkoxy, C 6 .
  • R a and R b can also be
  • R f is hydrogen or a carbon based moiety of up to 24 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen, hydroxy and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen; or
  • one of R a or R b can be -C(O)-, a C ! -C 5 divalent alkylene group or a substituted C 1 -C 5 divalent alkylene group bound to the moiety L to form a cyclic stmcture with at least 5 members, wherein the substituents of the substituted C ⁇ -C 5 divalent alkylene group are selected from the group consisting of halogen, hydroxy, and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen.
  • the carbon based moieties of R f and the substituents on R a and R b include C MO alkyl, C MO alkyl, CM O alkoxy, C 3 -C 10 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C_-n aryl, C 3 -C12 hetaryl having 1-3 heteroatoms selected from O, S and N, C - 24 aralkyl, substituted C M O alkyl, substituted C1-C10 alkoxy, substituted C 3 -C12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, substituted C 3 -C 12 heteraryl having 1-3 heteroatoms selected from O, S, and N, substituted C 6 -i 2 aryl, and substituted C .
  • R f is a substituted group it is substituted halogen up to per halo, hydroxy, CM O alkyl, C 3 - 12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C 3 .
  • R g is C MO alkyl; -CN, -CO 2 Rd, -ORd, -SR_, -NO 2 , -C(O) R-, -NRjRe, -NRj C(O)OR e and -NRj C(O)Re, and Rd and R» are independently selected from the group consisting of hydrogen, C MO , alkyl, C MO alkoxy, C 3 - 1 0 cycloalkyl having 0-3 heteroatoms selected from O, N and S, C 6 -i 2 aryl, C 3 -C 12 hetaryl with 1-3 heteroatoms selected from O, N and S and C 7 -C 24 aralkyl, C -C2 alkaryl, up to per halo substituted Ci-do alkyl, up to per halo substituted C 3 -C10 cycloalkyl having 0-3 heteroatoms selected from O, N and S, up to per halo substituted C 6 -C ⁇
  • the bridging group M in the formula -L-CML 1 ⁇ , for B is preferably selected from the group consisting of -O-, -S-, -N(R 7 )-, -(CH 2 ) m -, -C(O)-, -CH(OH)-, -(CH 2 ) m O-, -( CH 2 ) m S-, -( CH 2 ) m N(R 7 )-, -O(CH 2 ) m - CHX ⁇ -CX a 2 -, -S-(CH 2 ) m -, -N(R 7 )(CH 2 ) m - and
  • M is -O-, -CH 2 - 3 -S-, -NH-, -C(O)-, -O-CH 2 - and -CH 2 -O-.
  • the moieties L and L 1 in the formula -L ⁇ ML 1 ⁇ for B are typically each, independently, a substituted aryl moiety having at least 6 cyclic members, a substituted heterocyclic moiety having at least 5 cyclic members, an unsubstituted aryl moiety having at least 6 cyclic members or an unsubstituted heterocyclic moiety having at least 5 cyclic members.
  • the heterocyclic and hetaryl moietes for L and L' typically have 1 to 4 members selected from the group of hetero atoms consisting of nitrogen, oxygen and sulfur with the balance of the hetaryl or heterocyclic moiety being carbon.
  • More typical moieties for L 1 and L are selected from the group consisting of thiophene, substituted thiophene, phenyl, substituted phenyl, pyridinyl, substituted pyridinyl, pyrimidinyl and substituted pyrimidinyl.
  • the substituents are selected from the group consisting of halogen, up to per-halo, and Jn where n is 0-3, and J is as defined above.
  • Preferred compounds of Formula I include those wherein the cyclic structures of B and L bound directly to D are not substituted in the ortho position by-OH.
  • the invention provides hetaryl compounds containing nitrogen hetero-atoms of formula ⁇
  • D is as defined above for formula I and A' is either a substituted t- butylpyridyl, unsubstituted t-butylpyridyl, substituted (trifluoromethyl)pyridyl, unsubstituted (trifluoromethyl)pyridyl, substituted isopropylpyridyl, unsubstituted sopropylpyridyl, substituted ⁇ (2-methylr2-butyl)pyridyl, unsubstituted (2-methyl-2- butyl)pyridyl, substituted (3-ethyl-3-pentyl)pyridyl, unsubstituted (3-ethyl-3- pentyl)pyridyl, substituted isoquinolinyl, unsubstituted isoquinolinyl or unsubstituted quinolinyl.
  • B' can be a substituted or unsubstituted 6 member cyclic aryl ring, at least a 5 member heterocylic ring or from 2-3 fused rings of up to 30 carbon atoms (aryl hetaryl or both).
  • A' is substituted or unsubstituted t-butylyridyl, (trifluoromethyl)pyridyl, isopropylpyridyl, (2-methyl-2-butyl)pyridyl or (3-ethyl-3- pentyl)pyridyl.
  • A' is a substituted isoquinolinyl, unsubsituted isoquinolinyl or unsubstituted quinolinyl group.
  • the substituents for the substituted groups of A' are as defined for A.
  • Preferred substituents are selected from the group consisting of up to per halo substituted CM O alkoxy, up to per halo substituted C MO alkyl and C ⁇ o heteroyclic moieties comprising 1 to 2 heteroatoms selected from the group consisting of nitrogen, oxygen and sulfur.
  • B' is a 6 member cyclic aryl ring, at least a 5 member heterocyclic ring o ' r 2-3 fused rings of up to 30 carbon atoms
  • R 7 and R 7' are, independently, as defined above.
  • the substituents are selected from the group consisting of - C ⁇ , halogen, OH, - ⁇ O 2 , -OR 7 , -SR 7 , -NR 7 R 7' , -NR 7 C(O)OR 7' , C M0 alkyl, C MO alkoxy, C2- 10 alkenyl, C MO alkenoyl, substituted C MO alkoxy, substituted C2-10 alkenyl and substituted alkenoyl C MO , with R 7 and R 7' as defined above.
  • R a and R b preferably are each, independently, C MO alkyl, C O alkoxy, C3-10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms, C 2 - 10 alkenyl, CMO alkenoyl, C 6 . 12 aryl, C 3 . 12 hetaryl having at least 5 cyclic members and 1-3 heteroatoms selected from N, S and O, C 24 aralkyl, C 7 .
  • B' is a substituted pyridyl, substituted quinolinyl or isoquinolinyl group
  • B' is preferably substituted 1 to 3 times by 1 or more substituents selected from the group consisting of-CN, halogen, C 1 -C10 alkyl, C 1 -C 10 alkoxy, -OH, up to per halo substituted d-do alkyl, up to per halo substituted d-do alkoxy or phenyl substituted by halogen up to per halo.
  • suitable hetaryl groups include, but are not limited to, 4-12 carbon-atom aromatic rings or ring systems containing 1-3 rings, at least one of which is aromatic, in which one or more, e.g., 1-4 carbon atoms in one or more of the rings can be replaced by oxygen, nitrogen or sulfur atoms.
  • Each ring typically has 5-7 member atoms.
  • B can be 2- or 3 -furyl, 2- or 3-thienyl, 2- or 4-triazinyl, 1-, 2- or 3-pyrrolyl, 1-, 2-, 4- or 5-imidazolyl, 1-, 3-, 4- or 5-pyrazolyl, 2-, 4- or 5-oxazolyl, 3-, 4- or 5- isoxazolyl, 2-, 4- or 5-thiazolyl, 3-, 4- or 5-isothiazolyl, 2-, 3- or 4-pyridyl, 2-, 4-, 5- or 6- pyrimidinyl, 1,2,3-triazol-l-, -4- or -5-yl, 1,2,4-triazol-l-, -3- or -5-yl, 1- or 5-tetrazolyl, l,2,3-oxadiazol-4- or -5-yl, l,2,4-oxadiazol-3- or -5-yl, l,3,4-thiadiazol-2- or -5-yl, l,2,4-oxadiazol
  • B can be 4-methyl-phenyl, 5-methyl-2 -thienyl, 4-methyl-2 -thienyl, l-methyl-3- pyrryl, l-methyl-3-pyrazolyl, 5-methyl-2-thiazolyl or 5-methyl-l,2,4-thiadiazol-2-yl.
  • Suitable alkyl groups and alkyl portions of groups, e.g., alkoxy, etc. throughout include methyl, ethyl, propyl, butyl, etc., including all straight-chain and branched isomers such -as, isopropyl, isobutyl, .sec-butyl, tert-butyl, etc.
  • Suitable aryl groups which do not contain heteroatoms include, for example, phenyl and 1- and 2-naphthyl.
  • cycloalkyl refers to cyclic structures with or without alkyl substituents such that, for example, "C cycloalkyl” includes methyl substituted cyclopropyl groups as well as cyclobutyl groups.
  • cycloalkyl as used herein also includes saturated heterocyclic groups. Suitable halogen groups include F, Cl, Br, and/or I, from one to per-substitution (i.e. all H atoms on a group replaced by a halogen atom) being possible where an alkyl group is substituted by halogen, mixed substitution of halogen atom types also being possible on a given moiety.
  • Suitable pharmaceutically acceptable salts are well known to those skilled in the art and include basic salts of inorganic and organic acids, such as hydrochloric acid, hydrobromic acid, sulphuric acid, phosphoric acid, methanesulphonic acid, trifluoromethanesulfonic acid, benzenesulphonic acid, j?-toluenesulfonic acid, 1- naphthalenesulfonic acid, 2-naphthalenesulfonic acid, acetic acid, trifluoroacetic acid, malic acid, tartaric acid, citric acid, lactic acid, oxalic acid, succinic acid, fumaric acid, maleic acid, benzoic acid, salicylic acid, phenylacetic acid, and mandelic acid.
  • basic salts of inorganic and organic acids such as hydrochloric acid, hydrobromic acid, sulphuric acid, phosphoric acid, methanesulphonic acid, trifluoromethanesulfonic acid,
  • pharmaceutically acceptable salts include acid salts of inorganic bases, such as salts containing alkaline cations (e.g., Li + Na + or K + ), alkaline earth cations (e.g., Mg +2 , Ca +2 or Ba +2 ), the ammonium cation, as well as acid salts of organic bases, including aliphatic and aromatic substituted ammonium, and quaternary ammonium cations, such as those arising from protonation or peralkylation of triethylamine, N,N-diethylamine, N,N-dicyclohexylamine, lysine, pyridine, N,N-dimethylaminopyridine (DMAP), 1,4- diazabiclo[2.2.2]octane (DABCO), l,5-diazabicyclo[4.3.0]non-5-ene (DB ⁇ ) and 1,8- diazabicyclo[5.4.0]undec-7-ene (
  • a number of the compounds of Formulae I and 11 possess asymmetric carbons and can therefore exist in racemic and optically active forms. Methods of separation of enantiomeric and diastereomeric mixtures are well known to one skilled in the art.
  • the present invention encompasses any racemic or optically active form of compounds described in Formula II which possess progesterone receptor binding activity.
  • the compounds of Formulae I and J3 may be prepared by the use of known chemical reactions and procedures, some from starting materials which are commercially available. Nevertheless, general preparative methods are provided below to aid one skilled in the art in synthesizing these compounds, with more detailed examples being provided in the Experimental section which follows.
  • Substituted and unsubstituted aminoquinolines, aminoisoquinolines and aminopyridines maybe prepared using standard methods (see, for example: A.R. Katritzky et al. (Eds.). Comprehensive Heterocyclic Chemistry II, Vol. 5. M.H. Palmer. Heterocyclic
  • aryl amines are commonly synthesized by reduction of nitroaryls using a metal catalyst, ' such as Ni, Pd, or Pt, and H or a hydride transfer agent, such as formate, cyclohexadiene, or a borohydride (Rylander. Hydrogenation Methods; Academic Press: London, UK (1985)). Nitroaryls may also be directly reduced using a strong hydride source, such as LiAlH (Seyden-Penne.
  • Nitroaryls are commonly formed by electrophilic aromatic nitration using HNO , or an alternative NO 2 + source. Nitroaryls may be further elaborated prior to reduction. Thus, nitroaryls substituted with
  • potential leaving groups may undergo substitution reactions on treatment with nucleophiles, such as thiolate (exemplified in Scheme II) or phenoxide. Nitroaryls may also undergo Ullman-type coupling reactions (Scheme IT).
  • Nitroaryls may also undergo transition metal mediated cross coupling reactions.
  • nitroaryl electrophiles such as nitroaryl bromides, iodides or triflates
  • palladium mediated cross coupling reactions with aryl nucleophiles, such as arylboronic acids (Suzuki reactions, exemplified below), aryltins (StiUe reactions) or arylzincs (Negishi reaction) to afford the biaryl (5).
  • aryl nucleophiles such as arylboronic acids (Suzuki reactions, exemplified below), aryltins (StiUe reactions) or arylzincs (Negishi reaction)
  • Either nitroaryls or anilines may be converted into the corresponding arenesulfonyl chloride (7) on treatment with chlorosulfonic acid.
  • Reaction of the sulfonyl chloride with a fluoride source, such as KF then affords sulfonyl fluoride (8).
  • Reaction of sulfonyl fluoride 8 with trimethylsilyl trifluoromethane in the presence of a fluoride source, such as tris(dimethylamino)sulfonium difluorotrimethylsiliconate (TASF) leads to the corresponding trifluoromethylsulfone (9).
  • TASF tris(dimethylamino)sulfonium difluorotrimethylsiliconate
  • sulfonyl chloride 7 may be reduced to the arenethiol (10), for example with zinc amalgum.
  • Reaction of thiol 10 with CHC1F 2 in the presence of base gives the difluoromethyl mercaptan (11), which may be oxidized to the sulfone (12) with any of a variety of oxidants, including CrO 3 -acetic • anhydride (Sedova et al. Zh. Org. Khim. 1970, 6, (568).
  • non-symmetrical urea formation may involve reaction of an aryl isocyanate (14) with an aryl amine (13).
  • the heteroaryl isocyanate may be synthesized from a heteroaryl amine by treatment with phosgene or a phosgene equivalent, such as trichloromethyl chloroformate (diphosgene), bis(trichloromethyl) carbonate (triphosgene), or N,N'-carbonyldiimidazole (GDI).
  • the isocyanate may also be derived from a heterocyclic carboxylic acid derivative, such as an ester, an acid halide or an anhydride by a Curtius-type rearrangement.
  • a heterocyclic carboxylic acid derivative such as an ester, an acid halide or an anhydride by a Curtius-type rearrangement.
  • reaction of acid derivative 16 with an azide source, followed by rearrangement affords the isocyanate.
  • the corresponding carboxylic acid (17) may also be subjected to Curtius-type rearrangements using diphenylphosphoryl azide (DPP A) or a similar reagent.
  • DPP A diphenylphosphoryl azide
  • ureas may be further manipulated using methods familiar to those skilled in the art.
  • the invention also includes pharmaceutical compositions including a compound of Formula I, and a physiologically acceptable carrier.
  • the compounds may be administered orally, dermally, parenterally, by injection, by inhalation or spray, or sublingually, rectally or vaginally in dosage unit formulations.
  • administration includes intravenous, intraarticular, intramuscular, subcutaneous and parenteral injections, as well as use of infusion techniques.
  • Dermal administration may include topical application or transdermal administration.
  • One or more compounds may be present in association with one or more non-toxic pharmaceutically acceptable carriers and if desired other active ingredients.
  • compositions intended for oral use may be prepared according to any suitable method known to the art for the manufacture of pharmaceutical compositions.
  • Such compositions may contain one or more agents selected from the group consisting of diluents, sweetening agents, flavoring agents, coloring agents and preserving agents in order to provide palatable preparations.
  • Tablets contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for the manufacture of tablets.
  • excipients may be, for example, inert diluents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, for example, corn starch, or alginic acid; and binding agents, for example magnesium stearate, stearic acid or talc.
  • the tablets may be uncoated or they may be coated by known techniques to delay disintegration and adso ⁇ tion in the gastrointestinal tract and thereby provide a sustained action over a longer period.
  • a time delay material such as glyceryl monostearate or glyceryl distearate may be employed.
  • These compounds may also be prepared in solid, rapidly released form.
  • Formulations for oral use may also be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium, for example peanut oil, liquid paraffin or olive oil.
  • an inert solid diluent for example, calcium carbonate, calcium phosphate or kaolin
  • water or an oil medium for example peanut oil, liquid paraffin or olive oil.
  • Aqueous suspensions containing the active materials in admixture with excipients suitable for the manufacture of aqueous suspensions may also be used.
  • excipients are suspending agents, for example sodium carboxymethylcellulose, methylcellulose, hydroxypropyl-methylcellulose, sodium alginate, polyvinylpyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents may be a naturally-occurring phosphatide, for example, lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyethylene sorbit
  • the aqueous suspensions may also contain one or more preservatives, for example ethyl, or «-propyl, -hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose or saccharin.
  • Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified by those aheady mentioned above. Additional excipients, for example, sweetening, flavoring and coloring agents, may also be present.
  • the compounds may also be in the form of non-aqueous liquid formulations, e.g., oily suspensions which may be formulated by suspending the active ingredients in a vegetable oil, for example arachis oil, olive oil, sesame oil or peanut oil, or in a mineral oil such as liquid paraffin.
  • the oily suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such as those set forth above, and flavoring agents may be added to provide palatable oral preparations. hese compositions may be preserved by the addition of an anti-oxidant such as ascorbic acid.
  • compositions of the invention may also be in the form of oil-in-water emulsions.
  • the oil phase may be a vegetable oil, for example olive oil or arachis oil, or a mineral oil, for example liquid paraffin or mixtures of these.
  • Suitable emulsifying agents may be naturally-occurring gums, for example gum acacia or gum tragacanth, naturally- occurring phosphatides, for example soy bean, lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate, and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate.
  • the emulsions may also contain sweetening and flavoring agents.
  • Syrups and elixirs may be formulated with sweetening agents, for example glycerol, propylene glycol, sorbitol or sucrose. Such formulations may also contain a demulcent, a preservative and flavoring and coloring agents. The compounds may also be adir ⁇ iistered in the form of suppositories for rectal or vaginal administration of the dmg.
  • sweetening agents for example glycerol, propylene glycol, sorbitol or sucrose.
  • Such formulations may also contain a demulcent, a preservative and flavoring and coloring agents.
  • the compounds may also be adir ⁇ iistered in the form of suppositories for rectal or vaginal administration of the dmg.
  • These compositions can be prepared by mixing the drug with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal or vaginal temperature and will therefore melt in the rectum or vagina to release
  • Compounds of the invention may also be administered transdermally using methods known to those skilled in the art (see, for example: Chien; “Transdermal Controlled Systemic Medications”; Marcel Dekker, Inc.; 1987. Lipp et al. WO94/04157 3Mar94).
  • a solution or suspension of a compound of Formula I in a suitable, volatile solvent optionally containing penetration enhancing agents can be combined with additional additives known to those skilled in the art, such as matrix materials and bacteriocides. After sterilization, the resulting mixture can be formulated following known procedures into dosage forms.
  • a solution or suspension of a compound of Formula I may be formulated into a lotion or salve.
  • Suitable solvents for processing transdermal delivery systems are known to those skilled in the art, and include lower alcohols such as ethanol or isopropyl alcohol, lower ketones such as acetone, lower carboxylic acid esters such as ethyl acetate, polar ethers such as tetrahydrofuran, lower hydrocarbons such as hexane, cyclohexane or benzene, or halogenated hydrocarbons such as dichlorome bane, chloroform, trichlorotrifluoroethane, or trichlorofluoroethane.
  • Suitable solvents may also include mixtures one or more materials selected from lower alcohols, lower ketones , lower carboxylic acid esters, polar ethers, lower hydrocarbons, halogenated hydrocarbons.
  • Suitable penetration enhancing materials for transdermal delivery systems include, for example, monohydroxy or polyhydroxy alcohols such as ethanol, propylene glycol or benzyl alcohol, saturated or unsaturated C 8 -C 18 fatty alcohols such as lauryl alcohol or cetyl alcohol, saturated or unsaturated C 8 -C ⁇ 8 fatty acids such as stearic acid, saturated or unsaturated fatty esters with up to 24 carbons such as methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl isobutyl tert-butyl or monoglycerin esters of acetic acid, capronic acid, lauric acid, myristinic acid, stearic acid, or palmitic acid, or diesters of saturated or unsaturated dicarboxylic acids with a total of up to 24 carbons such as diisopropyl adipate, diisobutyl adipate, diiso
  • Additional penetration enhancing materials include phosphatidyl derivatives such as lecithin or cephalin, terpenes, amides, ketones, ureas and their derivatives, and ethers such as dimethyl isosorbid and diethyleneglycol monoethyl ether.
  • Suitable penetration enhancing formulations may also include mixtures one or more materials selected from monohydroxy or polyhydroxy alcohols, saturated or unsaturated C 8 -C 18 fatty alcohols, saturated or unsaturated C 8 -C 18 fatty acids, saturated or unsaturated fatty esters with up to 24 carbons, diesters of saturated or unsaturated dicarboxylic acids with a total of up to 24 carbons, phosphatidyl derivatives, terpenes, amides, ketones, ureas and their derivatives, and ethers.
  • Suitable binding materials for transdermal delivery systems include polyacrylates, silicones, polyurethanes, block polymers, styrene- butadiene coploymers, and natural and synthetic rubbers.
  • Cellulose ethers, derivatized polyethylenes, and silicates may also be used as matrix components. Additional additives, such as viscous resins or oils may be added to increase the viscosity of the matrix.
  • the daily oral dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight.
  • the daily dosage for administration by injection including intravenous, intramuscular, subcutaneous and parenteral injections, and use of infusion techniques will preferably be from 0.01 to 200 mg/Kg of total body weight.
  • the daily rectal dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight.
  • the daily vaginal dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight.
  • These daily dosages can be administered incrementally during the day, on a weekly basis on a biweekly basis or longer periods. Long term dosages typically range from 100-600 mg/kg of total body weight and preferably range from 100-400 mg/kg of total body weight.
  • Dosages for oral, vaginal and rectal administration and administration by injection can range from 0.01 mg - 600 mg/kg of total body weight.
  • the daily topical dosage regimen will preferably be from 0.1 to 200 mg administered between one to four times daily.
  • the transdermal concentration will preferably be that required to maintain a daily dose of from 0.01 to 200 mg Kg.
  • the daily inhalation dosage regimen will preferably be from 0.01 to 10 mg/Kg of total body weight.
  • the particular method of administration will depend on a variety of factors, all of which are considered routinely when administering therapeutics. It will also be understood, however, that the specific dose level for any given patient will depend upon a variety of factors, including, but not limited to the activity of the specific compound employed, the age of the patient, the body weight of the patient, the general health of the patient, the gender of the patient, the diet of the patient, time of administration, route of administration, rate of excretion, drug combinations, and the severity of the condition undergoing therapy.
  • the optimal course of treatment ie., the mode of treatment and the daily or weekly number of doses of a compound of Formulae I or JJ or a pharmaceutically acceptable sal ⁇ hereof given for a defined number of days, can be ascertained by those skilled in the art using conventional treatment tests.
  • N- cyclohexyl-N'-(methylpolystyrene)carbodiimide was purchased from Calbiochem- ⁇ ovabiochem Corp.
  • Visualization of plates was effected by one or more of the following techniques: (a) ultraviolet illumination, (b) exposure to iodine vapor, (c) immersion of the plate in a 10% solution of phosphomolybdic acid in ethanol followed by heating, (d) immersion of the plate in a cerium sulfate solution followed by heating, and/or (e) immersion of the plate in an acidic ethanol solution of 2,4- dinitrophenylhydrazine followed by heating. Column chromatography (flash chromatography) was performed using 230-400 mesh EM Science ® silica gel.
  • Carbon ( 13 C) NMR spectra were measured with a General Electric GN-Omega 300 (75 MHz) spectrometer with solvent (CDC1 3 ⁇ 77.0; MeOD-d 3 ; ⁇ 49.0; DMSO-d 6 ⁇ 39.5) as standard.
  • Low resolution mass spectra (MS) and high resolution mass spectra (HRMS) were either obtained as electron impact (El) mass spectra or as fast atom bombardment (FAB) mass spectra.
  • Electron impact mass spectra (EI-MS) were obtained, with a Hewlett Packard 5989A mass spectrometer equipped with a Vacumetrics Desorption Chemical loniza ion-Probe for sample introduction. The ion source was maintained at 250 °C.
  • Electron impact ionization was performed with electron energy of 70 eV and a trap current of 300 ⁇ A.
  • Liquid-Cesium secondary ion mass spectra FAB-MS
  • FAB-MS Liquid-Cesium secondary ion mass spectra
  • CI-MS Chemical ionization mass spectra
  • HPLC - electrospray mass spectra were obtained using a Hewlett-Packard 1100 HPLC equipped with a quaternary pump, a variable wavelength detector, a C-18 column, and a Finnigan LCQ ion trap mass spectrometer with electrospray ionization.
  • Spectra were scanned from 120-800 amu using a variable ion time according to the number of ions in the source.
  • Gas chromatography - ion selective mass spectra (GC-MS) were obtained with a Hewlett Packard 5890 gas chromatograph equipped with an HP-1 methyl silicone column (0.33 mM coating; 25 m x 0.2 mm) and a Hewlett Packard 5971 Mass Selective Detector (ionization energy 70 eV). Elemental analyses were conducted by Robertson Microlit Labs, Madison NJ.
  • Step 1 l-Methoxy-4-(4-nitrophenoxy)benzene: To a suspension of NaH.(95%, 1.50 g, 10 59 mmol) in DMF (100 mL) at room temp, was added dropwise a solution of 4- methoxyphenol (7.39 g, 59 mmol) in DMF (50 mL). The reaction was stirred 1 h, then a solution of l-fluoro-4-nitrobenzene (7.0 g, 49 mmol) in DMF (50 mL) was added dropwise to form a dark green solution. The reaction was heated at 95 °C overnight, then cooled to room temp., quenched with H 2 O, and concentrated in vacuo.
  • Step 2 4-(4-Methoxyphenoxy)aniline: To a solution of l-methoxy-4-(4- nitrophenoxy)benzene (12.0 g, 49 mmol) in EtOAc (250 mL) was added 5% Pt/C (1.5 g) 25 and the resulting slurry was shaken under a H 2 atmosphere (50 psi) for 18 h.
  • Step 1 3-(Trifluoromethyl)-4-(4-pyridinylthio)nitrobenzene: A solution of 4- mercaptopyridine (2.8 g, 24 mmoles), 2-fluoro-5-nitrobenzotrifluoride (5 g, 23.5 mmoles), and potassium carbonate (6.1 g, 44.3 mmoles) in anhydrous DMF (80 mL) was stirred at room temperature and under argon overnight. TLC showed complete reaction. The mixture was diluted with Et 2 O (100 mL) and water (100 mL) and the aqueous layer was back-extracted with Et 2 O (2 x 100 mL).
  • Step 2 3-(Trifluoromethyl)-4-(4-pyridinylthio)aniline: A slurry of 3-trifluoromethyl- 4-(4-pyridinylthio)nitrobenzene (3.8 g, 12.7 mmol), iron powder (4.0 g, 71.6 mmol), acetic acid (100 mL), and water (1 mL) were stirred at room temp, for 4 h. -Tho mixture was diluted with Et 2 O (100 mL) and water (100 mL). The aqueous phase was adjusted to pH 4 with a 4 N NaOH solution. The combined organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO ), and concentrated under reduced pressure.
  • Step 1 4-(2-(4-Phenyl)thiazolyl)thio-l -nitrobenzene: A solution of 2-mercapto-4- phenylthiazole (4.0 g, 20.7 mmoles) in DMF (40 mL) was treated with l-fluoro-4- nitrobenzene (2.3 mL, 21.7 mmoles) followed by K 2 CO 3 (3.18 g, 23 mmol), and the mixture was heated at approximately 65 °C overnight. The reaction mixture was then diluted with EtOAc (100 mL), sequentially washed with water (100 mL) and a saturated NaCl solution (100 mL), dried (MgSO 4 ) and concentrated under reduced pressure.
  • EtOAc 100 mL
  • Step 2 4-(2-(4-Phenyl)thiazolyl)thioamline: 4-(2-(4-Phenyl)thiazolyl)thio-l-nitro- benzene was reduced in a manner analagous to that used in the preparation of 3-
  • Step 1 4-(6-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 5-hydroxy-2- methylpyridine (5.0 g, 45.8 mmol) and l-fluoro-4-nitrobenzene (6.5 g, 45.8 mmol) in anh DMF (50 mL) was added K 2 CO3 (13.0 g, 91.6 mmol) in one portion. The mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The resulting mixture was poured into water (200 mL) and extracted with EtOAc (3 x 150 mL).
  • Step 2 4-(6-Methyl-3-pyridinyloxy)aniline: A solution of 4-(6-methyl-3- pyridinyloxy)- 1 -nitrobenzene (4.0 g, 17.3 mmol) in EtOAc (150 mL) was added to 10%> Pd C (0.500 g, 0.47 mmol) and the resulting mixture was placed under a H 2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite ® and concentrated in vacuo to afford the desired product as a tan solid (3.2 g, 92%): EI-MS m/z 200 (M + ).
  • Step 1 4-(3,4-Dimethoxyphenoxy)-l-nitrobenzene: To a solution of 3,4- dimethoxyphenol (1.0 g, 6.4 mmol) and l-fluoro-4-nitrobenzene (700 ⁇ L, 6.4 mmol) in anh DMF (20 mL) was added K 2 CO 3 (1.8 g, 12.9 mmol) in one portion. The mixture was heated at the reflux temp with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (100 mL) and extracted with EtOAc (3 x 100 mL).
  • Step 2 4-(3,4-Dimethoxyphenoxy)aniline: A solution of 4-(3,4-dimethoxy-phenoxy)-l- nitrobenzene (0.8 g, 3.2 mmol) in EtOAc (50 mL) was added to 10% Pd/C (0.100 g) and the resulting mixture was placed under a H 2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite ® and concentrated in vacuo to afford the desired product as a white solid (0.6 g, 75%): EI-MS m/z 245 (W ).
  • Step 1 3-(3-Pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxypyridine (2.8 g, 29.0 mmol), l-bromo-3-nitrobenzene (5.9 g, 29.0 mmol) and copper(I) bromide (5.0 g, 34.8 mmol) in anh DMF (50 mL) was added K 2 CO 3 (8.0 g, 58.1 mmol) in one portion. The resulting mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (200 mL) and extracted with EtOAc (3 x 150 mL).
  • Step 1 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxy-5- methylpyridine (5.0 g, 45.8 mmol), l-bromo-3 -nitrobenzene (12.0 g, 59.6 mmol) and co ⁇ per(I) iodide (10.0 g, 73.3 mmol) in anh DMF (50 mL) was added K 2 CO 3 (13.0 g, 91.6 mmol) in one portion. The mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (200 mL) and extracted with EtOAc (3 x 150 mL).
  • Step 2 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: A solution of 3-(5-methyl-3- pyridinyloxy)-l -nitrobenzene (1.2 g, 5.2 mmol) in EtOAc (50 mL) was added to 10% Pd/C (0.100 g) and the resulting mixture was placed under a H 2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite ® and concentrated in vacuo to afford the desired product as a red oil (0.9 g, 86%): CI-MS m/z 201 ((M+H) + ).
  • Step 1 5-Nitro-2-(4-methylphenoxy)pyridine: To a solution of 2-chloro-5- nitropyridine (6.34 g, 40 mmol) in DMF (200 mL) were added of 4-methylphenol (5.4 g, 50 mmol, 1.25 equiv) and K 2 CO 3 (8.28 g, 60 mmol, 1.5 equiv). The mixture was stirred overnight at room temp. The resulting mixture was treated with water (600 mL) to generate a precipitate.
  • Step 1 4-(3-Thienylthio)-l-nitrobenzene: To a solution of 4-nitrothiophenol (80%pure;
  • Step 2 4-(3-Thienylthio)aniline: 4-(3-Thienylthio)-l -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method Al .
  • 4-(5-Pyrimininyloxy)aniline 4-Aminophenol (1.0 g, 9.2 mmol) was dissolved in DMF (20 mL) then 5-bromopyrimidine (1.46 g, 9.2 mmol) and K2CO3 (1.9 g, 13.7 mmol) were added. The mixture was heated to 100 °C for 18 h and at 130 °C for 48 h at which GC- MS analysis indicated some remaining starting material. The reaction mixture was cooled to room temp, and diluted with water (50 mL). The resulting solution was extracted with EtOAc (100 mL).
  • the bright orange reaction mixture was warmed to 0 °C and was treated with a mixture of a 3 N NaOH solution (25 mL, 71.77 mmol) and a hydrogen peroxide solution (30%; approx. 50 mL).
  • the resulting yellow and slightly turbid reaction mixture was warmed to room temp, for 30 min and then heated to the reflux temp, for 1 h.
  • the reaction mixture was then allowed to cool to room temp.
  • the aqueous layer was neutralized with a IN HCI solution then extracted with Et 2 O (2 x 100 mL).
  • the combined organic layers were dried (Na 2 SO 4 ) and concentrated under reduced pressure to give a viscous yellow oil (3.5g, 60%).
  • Step 3 4-(5-(2-Methoxy)pyridyl)oxy-l-nitrobenzene: To a stirred slurry of NaH (97%, 1.0 g, 42 mmol) in anh DMF (100 mL) was added a solution of 5-hydroxy-2- methoxypyridine (3.5g, 28 mmol) in DMF (100 mL). The resulting mixture was allowed to stir at room temp, for 1 h, 4-fluoronitrobenzene (3 mL, 28 mmol) was added via syringe. The reaction mixture was heated to 95 °C overnight, then treated with water (25 mL) and extracted with EtOAc (2 x 75 mL).
  • Step 1 MethyI(4-nitrophenyl)-4-pyridylamine: To a suspension of N-methyl-4- nitroaniline (2.0 g, 13.2 mmol) and K 2 CO 3 (7.2 g, 52.2 mmol) in DMPU (30mL) was added 4-chloropyridine hydrochloride (2.36 g, 15.77 mmol). The reaction mixture was heated at 90 °C for 20 h, then cooled to room temperature. The resulting mixture was diluted with water (100 mL) and extracted with EtOAc (100 mL). The organic layer was washed with water (100 mL), dried ( ⁇ a 2 SO ) and concentrated under reduced pressure. The residue was purified by column chromatography (silica gel, gradient from 80%> EtOAc /20% hexanes to 100% EtOAc) to afford methyl(4-nitrophenyl)-4-pyridylamine (0.42 g)
  • Step 2 Methyl(4-aminophenyl)-4-pyridylamine: Methyl(4-nitrophenyl)-4- pyridylamine was reduced in a manner analogous to that described in Method Al.
  • Step 1 4-(4-Butoxyphenyl)thio-l-nitrobenzene: To a solution of 4-(4-nitro ⁇ henyl- thio)phenol (1.50 g, 6.07 mmol) in anh DMF (75 ml) at 0 °C was added NaH (60% in mineral oil, 0.267 g, 6.67 mmol). The brown suspension was stirred at 0 °C until gas evolution stopped (15 min), then a solution of iodobutane (1.12 g, .690 ml, 6.07 mmol) in anh DMF (20 mL) was added dropwise over 15 min at 0 °C.
  • reaction was stirred at room temp, for 18 h at which time TLC indicated the presence of unreacted phenol, and additional iodobutane (56 mg, 0.035 mL, 0.303 mmol, 0.05 equiv) and NaH (13 mg, 0.334 mmol) were added.
  • additional iodobutane 56 mg, 0.035 mL, 0.303 mmol, 0.05 equiv
  • NaH 13 mg, 0.334 mmol
  • Step 2 4-(4-Butoxyphenyl)thioaniline: 4-(4-Butoxyphenyl)thio-l -nitrobenzene was reduced to the aniline in a manner analagous to that used in the preparation of 3- (trifluoromethyl)-4-(4-pyridmylthio)aniline (Method A3b, Step 2): TLC (33% EtOAc/77% hexane) R-0.38.
  • the resulting mixture was diluted with Et 2 O (200 mL), sequentially washed with a saturated NaHCO 3 solution (100 ml), water (100 mL) and a saturated NaCl solution (50 mL), dried (MgSO4), and concentrated under reduced pressure.
  • the resulting white solid was purified by silica gel chromatography (gradient from 33% EtOAc/67% hexane to 50% EtOAc/50% hexane) to afford the desired.
  • Step 1 3-(4-Nitrobenzyl)pyridine: A solution of 3-benzylpyridine (4.0 g, 23.6 mmol) and 70% nitric acid (30 mL) was heated overnight at 50 °C. The resulting mixture was allowed to cool to room temp, then poured into ice water (350 mL). The aqueous mixture then made basic with a IN NaOH solution, then extracted with Et 2 O (4 x 100 mL). The combined extracts were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na 2 SO ), and concentrated in vacuo.
  • Step 2 3-(4-Pyridinyl)methylaniline: 3-(4-Nitrobenzyl)pyridine was reduced to the aniline in a manner analogous to that described in Method Al .
  • Step 1 4-(l-Imidazolylmethyl)-l -nitrobenzene: To a solution of imidazole (0.5 g, 7.3 mmol) and 4-nitrobenzyl bromide (1.6 g, 7.3 mmol) in anh acetonitrile (30 mL) was added K 2 CO 3 (1.0 g, 7.3 mmol). The resulting mixture was stirred at room temp, for 18 h and then poured into water (200 mL) and the resulting aqueous solution was extracted with EtOAc (3 x 50 mL).
  • Step 2 4-(l-Imidazolylmethyl)aniline: 4-(l-lmidazolylmethyl)-l -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method A2.
  • Step 1 4-(l-Hydroxy-l-(4-pyridyl)methyl-l -nitrobenzene: To a stirred solution of 3- (4-nitrobenzyl)pyridine (6.0 g, 28 mmol) in CH 2 C1 2 (90 mL) was added m-CPBA (5.80 g, 33.6 mmol) at 10 °C, and the mixture was stirred at room temp, overnight. The reaction mixture was successively washed with a 10%> NaHSO 3 solution (50 mL), a saturated K 2 CO 3 solution (50 mL) and a saturated NaCl solution (50 mL), dried (MgSO ) and concentrated under reduced pressure.
  • 3- (4-nitrobenzyl)pyridine 6.0 g, 28 mmol
  • m-CPBA 5.80 g, 33.6 mmol
  • Step 2 4-(l-Hydroxy-l-(4-pyridyl)methyIaniIine: 4-(l -Hydroxy- 1 -(4-pyridyl)-methyl- 1 -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method A3d, Step2.
  • Step 1 2-(N-methylcarbamoyl)-4-chloropyridine. (Caution: this is a highly hazardous, potentially explosive reaction.) To a solution of 4-chloropyridine (10.0 g) inN- methylformamide (250 mL) under argon at ambient temp was added cone. H 2 SO 4 (3.55 mL) (exotherm). To this was added H2O 2 (17 mL, 30%> wt in H 2 O) followed by FeSO 4 ' 7H 2 O (0.55 g) to produce an exotherm. The reaction was stirred in the dark at ambient temp for lh then was heated slowly over 4 h at 45 °C. When bubbling subsided, the reaction was heated at 60 °C for 16 h.
  • Step lb Synthesis of 4-chloropyridine-2-carbonyl chloride HCI salt via picolinic acid
  • Anhydrous DMF (6.0 mL) was slowly added to SOCl 2 (180 mL) between 40° and 50 °C. The solution was stirred in that temperature range for 10 min. then picolinic acid (60.0 g, 487 mmol) was added in portions over 30 min. The resulting solution was heated at 72 °C (vigorous SO 2 evolution) for 16 h to generate a yellow solid precipitate. The resulting mixture was cooled to room temp., diluted with toluene (500 mL) and concentrated to 200 mL. The toluene addition/concentration process was repeated twice.
  • Step 3a Synthesis of 4-chloro-iV-methyl-2-pyridmecarboxamide from methyl
  • Step 3b Synthesis of 4-chIoro-N-methyl-2-pyridinecarboxamide from 4- chloropyridine-2-carbonyl chloride
  • Step 2 Synthesis of 5-(4 ⁇ nitrophenoxy)isoindoline-l,3-dione To a stirring slurry of NaH (1.1 g, 44.9 mmol) in DMF (40 mL) at 0 °C was added a solution of 5-hydroxyisoindoline-l,3-dione (3.2 g, 19.6 mmol) in DMF (40 mL) dropwise. The bright yellow-green mixture was allowed to return to room temp, and was stirred for 1 h, then l-fluoro-4-nitrobenzene (2.67 g, 18.7 mmol) was added via syringe in 3-4 portions.
  • Step 1 4-(4-Methylsulfonylphenoxy)-l-nitrobenzene: To a solution of 4-(4- methylthiophenoxy)-l-ntirobenzene (2 g, 7.66 mmol) in CH 2 C1 2 (75 mL) at 0 °C was slowly added wCPBA (57-86%, 4 g), and the reaction mixture was stirred at room temperature for 5 h. The reaction mixture was treated with a 1 N NaOH solution (25 mL).
  • Step 2 4-(4-Methylsulfonylphenoxy)-l-aniline: 4-(4-Methylsulfonylphenoxy).-l- nitrobenzene was reduced to the aniline in a manner anaologous to that described in Method A3d, step 2.
  • Step 1 4-(3-Methoxycarbonyl-4-methoxyphenoxy)-l-nitrobenzene: To a solution of -(3-carboxy-4-hydroxyphenoxy)-l-nitrobenzene (prepared in a manner analogous to that described in Method A3 a, step 1, 12 mmol) in acetone (50 mL) was added K 2 CO 3 (5 g) and dimethyl sulfate (3.5 mL). The resulting mixture was heated at the reflux temperature overnight, then cooled to room temperature and filtered through a pad of Celite ® .
  • Step 2 4-(3-Carboxy-4-rnethoxyphenoxy)-l-nitrobenzene: A mixture of 4-(3- methoxycarbonyl-4-methoxyphenoxy)-l -nitrobenzene (1.2 g), KOH (0.33 g),and water (5 mL) in MeOH (45 mL) was stirred at room temperature overnight and then heated at the reflux temperature for 4 h. The resulting mixture was cooled to room temperature and concentrated under reduced pressure. The residue was dissolved in water (50 mL), and the aqueous mixture was made acidic with a IN HCI solution. The resulting mixture was extracted with EtOAc (50 mL). The orgarucjavetwas dried (MgSO 4 ) and concentrated under reduced pressure to give 4-(3-carboxy-4-methoxyphenoxy)-l -nitrobenzene (1.04 g).
  • N-(4-tert-butylpyridyl)-N , -(2,3-dichlorophenyl) urea A solution of 2-amino-4-tert- butylpyridine (192 mg) and 2,3-dichlorophenyl isocyanate (240 mg) in anh. toluene (15 mL) was heated at 70 °C under argon for 24 h. The resulting mixture was diluted with EtOAc (200 mL) then washed with water (125 mL). The organic layer was dried (MgSO 4 ) and concentrated under reduced pressure to give a gum.
  • N-(4-tert-Butylpyridyl)-N'-(4-(4-chlorophenoxy)phenyl) urea A solution of 4-tert- butyl-2-aminopyridine (0.177 g, 1.18 mmol, 1 equiv.) in 1.2 mL of anh. CH 2 ⁇ 2 (1.2 mL) was added to CDI (0.200 g, 1.24 mmol, 1.05 equiv) and the mixture was allowed to stir under argon at room temperature 1 d. To the resulting solution was added 4-(4- chlorophenoxy)aniline (0.259 g, 1.18 mmol, 1 equiv.) in one portion.
  • the resulting mixture was stirred at room temperature for 1 d, then was treated with a 10% citric acid solution (2 mL) and allowed to stir for 1 h.
  • the resulting organic layer was extracted with EtOAc (3 x 5 mL).
  • the combined organic layers were dried (MgSO ) and concentrated in vacuo.
  • the resultant residue was treated with CH 2 C1 2 (10 mL) and a 1 N aqueous NaOH solution. This mixttire was allowed to stir overnight.
  • the resulting organic layer was extracted with CH 2 C1 2 (3 x 5 mL).
  • the combined organic layers were (MgSO 4 ) and concentrated in vacuo.
  • the resultant solids were suspended in diethyl ether (10 mL) and sonicated for 15 minutes.
  • N-(2-(5-trifluoromethyl)pyridyloxy)-iV-(3-(4-pyridylthio)phenyl) urea A solution of 3-(4-pyridylthib)a ' n ⁇ e 300 mg, 1.48 mmoles) in CH 2 C1 2 (12 mL) was treated with CDI (253 mg, 1.56 mmoles). The solution was stirred at room temperature and under argon for 2 h. The resulting mixture was treated with 2-amino-5-(trifluoromethyl)pyridine (238 mg, 1.47 mmoles) and heated at 40 °C overnight.
  • Entry 9 4-tert-Butyl-2-aminopyridine was reacted with 4-(4-methoxyphenoxy)aniline according to Method B2c to afford the urea.
  • Entry 10 4-(4-Ammophenoxy)pyridine was prepared starting from 4-hydroxypyridine and l-bromo-3-nitrobenzene according to Method A3F. 4-tert-Butyl-2-aminopyridine was reacted with 4-(4-aminophenoxy)pyridine according to Method B2a to afford the urea.
  • Entry 18 3-Aminoisoquinoline was reacted with 1 -naphthyl isocyanate according to Method B 1 to afford the urea.
  • Entry 19 3-Aminoisoquinoline was reacted with 4-(4-pyridylmethyl)aniline according to Method B2a to afford the urea.
  • Entryl lO 4-Chloro-N-methyl-2 -pyridinecarboxamide, which was synthesized according to Method AlO, Step 3a, was reacted with 3-aminophenol according to Method AlO, Step 4 using DMAC in place of DMF to give 3-(-2-(N-methylcarbamoyl)-4- pyridyloxy)aniline. 3-Amino-2-methoxyquinoline was reacted with 3-(-2-(N- methylcarbamoyl)-4-pyridyloxy)aniline according to Method B6 to afford the urea.
  • the in vivo inhibitory properties of selected compounds were determined using a murine LPS induced TNF ⁇ production in vivo model.
  • BALB/c mice Charles River Breeding Laboratories; Springfield, NY
  • endotoxin E. coli lipopolysaccharide (LPS) 100 ⁇ g
  • LPS lipopolysaccharide
  • animals were euthanized by carbon dioxide asphyxiation and plasma was obtained from individual animals by cardiac puncture into heparinized tubes.
  • the samples were clarified by centrifugation at 12,500 x g for 5 min at 4 °C.
  • the supematants were decanted to new tubes, which were stored as needed at -20 °C.
  • TNF ⁇ levels in sera were measured using • a commercial murine TNF ELISA kit (Genzyme).

Abstract

This invention relates to the use of a group of heteroaryl ureas containing nitrogen in treating p38 mediated diseases, and pharmaceutical compositions for use in such therapy.

Description

HETEROARYL UREAS CONTAINING NITROGEN HETERO-ATOMS AS p38 KINASE INHIBITORS
Cross Reference to Related Applications
This is a continuation-in-part of application Serial No. 09/778,039 filed Febmary 7, 2001, which is a continuation-m-part of Serial No. 09/425,229 filed October 22, 1999, which is a continuation of 09/257,265 filed Febmary 25, 1999 which claims priority to provisional application 60/115,878, filed January 13, 1999.
Field of the Invention
This invention relates to the use of a group of heteroaryl ureas containing nitrogen hetero atoms in treating cytokine mediated diseases and proteolytic enzyme' mediated diseases, and pharmaceutical compositions for use in such therapy.
Background of the Invention
Two classes of effector molecules which are critical for the progression of rheumatoid arthritis are pro-inflammatory cytokines and tissue degrading proteases. Recently, a family of kinases was described which is mstrumental in controlling the transcription and translation of the structural genes coding for these effector molecules.
The mitogen-activated protein (MAP) kinase family is made up of a series of structurally related proline-directed serine/threonine kinases which are activated either by growth factors (such as EGF) and phorbol esters (ERK), or by IL-1, TNFα or stress (p38, INK). The MAP kinases are responsible for the activation of a wide variety of transcription factors and proteins involved in transcriptional control of cytokine production. A pair of novel protein kinases involved in the regulation of cytokine synthesis was recently described by a group from SmithKline Beecham (Lee et al. Nature 1994, 372, 739). These enzymes were isolated based on their affinity to bond to a class of compounds, named CSACDSs (cytokine suppressive anti-inflammatory drugs) by SKB. The CSAIDs, bicyclic pyridinyl imidazoles, have been shown to have cytokine inhibitory activity both in vitro and in vivo. The isolated enzymes, CSBP-1 and -2 (CSAID binding protein 1 and 2) have been cloned and expressed. A murine homologue for CSBP-2, p38, has also been reported (Han et al. Science 1994, 265, 808). Early studies suggested that CSAIDs function by interfering with m-RNA translational events during cytokine biosynthesis. Inhibition of p38 has been shown to inhibit both cytokine production (eg., TNFα, IL-1, JX-6, E -8) and proteolytic enzyme production (eg., MMP-1, MMP-3) in vitro and/or in vivo.
Clinical studies have linked TNFα production and/or signaling to a number of diseases including rheumatoid arthritis (Maini. J. Royal Coll. Physicians London 1996, 30, 344). In addition, excessive levels of TNFα have been implicated in a wide variety of inflammatory and/or immunomodulatory diseases, including acute rheumatic fever (Yegin et al. Lancet 1997, 349, 170), bone resorption (Pacifici et al. J. Clin. Endocrinol. Metabol. 1997, 82, 29), postmenopausal osteoperosis (Pacifici et al. J. Bone Mineral Res. 1996, 11, 1043), sepsis (Blackwell et al. Br. J. Anaesth. 1996, 77, 110), gram negative sepsis (Debets et al. Prog. Clin. Biol. Res. 1989, 308, 463), septic shock (Tracey et al. Nature 1987, 330, 662; Girardin et al. New England J. Med. 1988, 319, 397), endotoxic shock (Beutier et al. Science 1985, 229, 869; Ashkenasi et al. Proc. Nat 'I. Acad. Sci. USA 1991, 88, 10535), toxic shock syndrome, (Saha et al. J Immunol. 1996, 157, 3869; Lina et al. FEMS Immunol. Med. Microbiol. 1996, 13, 81), systemic inflammatory response syndrome (Anon. Crzt. Care Med. 1992, 20, 864), inflammatory bowel diseases (Stokkers et al. J. Inflamm. 1995-6, 47, 97) including Crohn's disease (van Deventer et al. Aliment. Pharmacol. Therapeu. 1996, 10 (Suppl. 2), 107; van Dullemen et al. Gastroenterology 1995, 109, 129) and ulcerative colitis (Masuda et al. J. Clin. Lab. Immunol. 1995, 46, 111), Jarisch-Herxheimer reactions (Fekade et al. New England J. Med. 1996, 335, 311), asthma (Amrani et al. Rev. Malad. Respir. 1996, 13, 539), adult respiratory distress syndrome (Roten et al. Am. Rev. Respir. Dis. 1991, 143, 590; Suter et al. Am. Rev. Respir. Dis. 1992, 145, 1016), acute pulmonary fibrotic diseases (Pan et al. Pathol. Int. 1996, 46, 91), pulmonary sarcoidosis (Ishioka et al. Sarcoidosis Vasculitis Diffuse Lung Dis. 1996, 13, 139), allergic respiratory diseases (Casale et al. Am. J. Respir. Cell Mol. Biol. 1996, 15, 35), silicosis (Gossart et al. J. Immunol. 1996, 156, 1540; Nanhee et al. Eur. Respir. J. 1995, 8, 834), coal worker's pneumoconiosis (Borm et al. Am. Rev. Respir. Dis. 1988, 138, 1589), alveolar injury (Horinouchi et al. Am. J. Respir. Cell Mol. Biol. 1996, 14, 1044), hepatic failure (Gantner et al. J. Pharmacol. Exp. Therap. 1997, 280, 53), liver disease during acute inflammation (Kim et al. J. Biol. Chem. 1997, 272, 1402), severe alcoholic hepatitis (Bird et al. Ann. Intern. Med. 1990, 112, 911), malaria (Grau et al. Immunol. Rev. 1989, 112, 49; Taverne et al. Parasitol. Today 1996, 12, 290) including Plasmodium falciparum malaria (Perlmann et al. Infect. Immunit. 1997, 65, 116) and cerebral malaria (Rudin et al. Am. J. Pathol. 1997, 150, 257), non-insulin-dependent diabetes mellitus (ΝIDDM; Stephens et al. J. Biol. Chem. 1997, 272, 971; Ofei et al. Diabetes 1996, 45, 881), congestive heart failure (Doyama et al. Int. J. Cardiol. 1996, 54, 217; McMurray et al. Br. Heart J. 1991, 66, 356), damage following heart disease (Malkiel et al. Mol. Med. Today 1996, 2, 336), atherosclerosis (Parums et al. J. Pathol. 1996, 179, A46), Alzheimer's disease (Fagarasan et al. Brain Res. 1996, 723, 231; Aisen et al. Gerontology 1997, 43, 143), acute encephalitis (Ichiyama et al. J Neurol. 1996, 243, 457), brain injury (Cannon et al. Crit. Care Med. 1992, 20, 1414; Hansbrough et al. Surg. Clin. N. Am. 1987, 67, 69; Marano et al. Surg. Gynecol. Obstetr. 1990, 170, 32), multiple sclerosis (M.S.; Coyle. Adv. Neuroimmunol. 1996, 6, 143; Matusevicius et al. J. Neuroimmunol. 1996, 66, 115) including demyelation and oligiodendrocyte loss in multiple sclerosis (Brosnan et al. Brain Pathol. 1996, 6, 243), advanced cancer (MucWierzgon et al. J Biol. Regulators Homeostatic Agents 1996, 10, 25), lymphoid malignancies (Levy et al. Crit. Rev. Immunol. 1996, 16, 31), pancreatitis (Exley et al. Gut 1992, 33, 1126) including systemic complications in acute pancreatitis (McKay et al. Br. J. Surg. 1996, 83, 919), impaired wound healing in infection inflammation and cancer (Buck et al. Am. J. Pathol. 1996, 149, 195), myelodysplastic syndromes (Raza et al. Int. J. Hematol. 1996, 63, 265), systemic lupus erythematosus (Maury et- al. Arthritis Rheum. 1989, 32, 146), biliary cirrhosis (Miller et al. Am. J. Gasteroenterolog. 1992, 87, 465), bowel necrosis (Sun et al. J. Clin. Invest.
1988, 81, 1328), psoriasis (Christophers. Austr. J. Dermatol. 1996, 37, S4), radiation injury (Redlich et al. J. Immunol. 1996, 157, 1705), and toxicity following administration of monoclonal antibodies such as OKT3 (Brod et al. Neurology 1996, 46, 1633). TNFα levels have also been related to host-versus-graft reactions (Piguet et al. Immunol. Ser. 1992, 56, 409) including ischemia reperfusion injury (Colletti et al. J. Clin. Invest. 1989, 85, 1333) and allograft rejections including those of the kidney (Maury et al. J. Exp. Med. 1987, 166, 1132), liver (Imagawa et al. Transplantation 1990, 50, 219), heart (Boiling et al. Transplantation 1992, 53, 283), and skin (Stevens et al. Transplant. Proc. 1990, 22, 1924), lung allograft rejection (Grossman et al. Immunol. Allergy Clin. N. Am.
1989, 9, 153) including chronic lung allograft rejection (obliterative bronchitis; LoCicero et al. J. Thorac. Cardiovasc. Surg. 1990, 99, 1059), as well as complications due to total hip replacement (Cirino et al. Life Sci. 1996, 59, 86). TNFα has also been linked to infectious diseases (review: Beutier et al. Crit. Care Med. 1993, 21, 5423; Degre. Biotherapy 1996, 8, 219) including tuberculosis (Rook et al. Med. Malad. Infect. 1996, 26, 904), Helicobacter pylori infection during peptic ulcer disease (Beales et al. Gastroenterology 1997, 112, 136), Chaga's disease resulting from Trypanosoma cruzi infection (Chandrasekar et al. Biochem. Biophys. Res. Commun. 1996, 223, 365), effects of Shiga-like toxin resulting from E. coli infection (Harel et al. J. Clin. Invest. 1992, 56, ' 40), the effects of enterotoxin A resulting from Staphylococcus infection (Fischer et al. J. Immunol. 1990, 144, 4663), meningococcal infection (Waage et al. Lancet 1987, 355; Ossege et al. J Neurolog. Sci. 1996, 144, 1), and infections from Borrelia burgdorferi (Brandt et al. Infect. Immunol. 1990, 58, 983), Treponema pallidum (Chamberlin et al. Infect. Immunol. 1989, 57, 2872), cytomegalovims (CMV; Geist et al. Am. J. Respir. Cell Mol. Biol. 1997, 16, 31), influenza virus (Beutier et al. Clin. Res. 1986, 34, 491a), Sendai virus (Goldfield et al. Proc. Nat'l. Acad. Sci. USA 1989, 87, 1490), Theiler's encephalomyelitis virus (Sierra et al. Immunology 1993, 78, 399), and the human immunodeficiency virus (HTV; Poli. Proc. Nat'l. Acad. Sci. USA 1990, 87, 782; Vyakaram et al. AIDS 1990, 4, 21; Badley et al. J. Exp. Med. 1997, 185, 55). Because inhibition of p38 leads to inhibition of TNFα production, p38 inhibitors will be useful in treatment of the above listed diseases. A number of diseases are thought to be mediated by excess or undesired matrix- destroying metalloprotease (MMP) activity or by an imbalance in the ratio of the MMPs to the tissue inhibitors of metalloproteinases (TIMPs). These include osteoarthritis (Woessner et al. J. Biol. Chem. 1984, 259, 3633), rheumatoid arthritis (Mullins et al. Biochim. Biophys. Acta 1983, 695, 117; Woolley et al. Arthritis Rheum. 1977, 20, 1231; Gravallese et al. Arthritis Rheum. 1991, 34, 1076), septic arthritis (Williams et al. Arthritis Rheum. 1990, 33, 533), tumor metastasis (Reich et al. Cancer Res. 1988, 48, 3307; Matrisian et al. Proc. Nat'l. Acad. Sci, USA 1986, 83, 9413), periodontal diseases (Overall et al. J. Periodontal Res. 1987, 22, 81), corneal ulceration (Bums et al. Invest. Opthalmol. Vis. Sci. 1989, 30, 1569), proteinuria (Baricos et al. Biochem. J. 1988, 254, 609), coronary thrombosis from atherosclerotic plaque rupture (Henney et al. Proc. Nat'l. Acad. Sci., USA 1991, 88, 8154), aneurysmal aortic disease (Vine et al. Clin. Sci. 1991, 81, 233), birth control (Woessner et al. Steroids 1989, 54, 491), dystrophobic epidermolysis bullosa (Kronberger et al. J. Invest. Dermatol. 1982, 79, 208), degenerative cartilage loss following traumatic joint injury, osteopenias mediated by MMP activity, tempero mandibular joint disease, and demyelating diseases of the nervous system (Chantry et al. J Neurochem. 1988, 50, 688).
Because inhibition of p38 leads to inhibition of MMP production, p38 inhibitors will be useful in treatment of the above listed diseases. Inhibitors of p38 are active in animal models of TNFα production, including a muirne lipopolysaccharide (LPS) model of TNFα production. Inhibitors of p38 are active in a number of standard animal models of inflammatory diseases, including carrageenan-induced edema in the rat paw, arachadonic acid-induced edema in the rat paw, arachadonic acid-induced peritonitis in the mouse, fetal rat long bone resorption, murine type II collagen-induced arthritis, and Fruend's adjuvant-induced arthritis in the rat. Thus, inhibitors of p38 will be useful in treating diseases mediated by one or more of the above-mentioned cytokines and/or proteolytic enzymes.
The need for new therapies is especially important in the case of arthritic diseases. The primary disabling effect of osteoarthritis, rheumatoid arthritis and septic arthritis is the progressive loss of articular cartilage and thereby normal joint function. No marketed pharmaceutical agent is able to prevent or slow this cartilage loss, although nonsteroidal antiinflammatory drugs (NSAIDs) have been given to control pain and swelling. The end result of these diseases is total loss of joint function which is only treatable by jpint replacement surgery. P38 inhibitors will halt or reverse the progression of cartilage loss and obviate or delay surgical intervention. Several patents have appeared claiming polyarylimidazoles and/or compounds containing polyarylimidazoles as inhibitors of p38 (for example, Lee et al. WO 95/07922;
Adams et al. WO 95/02591; Adams et al. WO 95/13067; Adams et al. WO 95/31451). It has been reported that arylimidazoles complex to the ferric form of cytochrome P450cam
(Harris et al. Mol. Eng. 1995, 5, 143, and references therein), causing concern that these compounds may display structure-related toxicity (Howard-Martin et al. Toxicol. Pathol.
1987, 15, 369). Therefore, there remains a need for improved p38 inhibitors.
Summary of the Invention
This invention provides compounds, generally described as heteroaryl ureas containing nitrogen hetero atoms, including pyridine, quinoline and isoquinoline. ureas, which inhibit p38 mediated events and thus inhibit the production of cytokines (such as TNFα, IL-1 and IL-8) and proteolytic enzymes (such as MMP-1 and MMP-3). The invention also provides compositions which contain heteroaryl ureas and a method of treating a cytokine mediated disease state in humans or mammals with heteroaryl ureas, wherein the cytokine is one whose production is affected by p38. Examples of such cytokines include, but are not limited to TNFα, EL-1 and IL-8. The invention also provides a method of treating a protease mediated disease state; in Jiumans or mammals, wherein the protease is one whose production is affected by p38, e.g. disease states mediated by one or more cytokines or proteolytic enzymes produced and/or activated by a p38 mediated process. Examples of such proteases include, but are not limited to collagenase (MMP-1) and stromelysin (MMP-3).
Accordingly, these compounds are useful therapeutic agents for such acute and chronic inflammatory and/or immunomodulatory diseases as rheumatoid arthritis, osteoarthritis, septic arthritis, rheumatic fever, bone resorption, postmenopausal osteoperosis, sepsis, gram negative sepsis, septic shock, endotoxic shock, toxic shock syndrome, systemic inflammatory response syndrome, inflammatory bowel diseases including Crohn's disease and ulcerative colitis, Jarisch-Herxheimer reactions, asthma, adult respiratory distress syndrome, acute pulmonary fibrotic diseases, pulmonary sarcoidosis, allergic respiratory diseases, silicosis, coal worker's pneumoconiosis, alveolar injury, hepatic failure, liver disease during acute inflammation, severe alcoholic hepatitis, malaria including Plasmodium falciparum malaria and cerebral malaria, non- ' insulin-dependent diabetes mellitus (NLODM), congestive heart failure, damage following heart disease, atherosclerosis, Alzheimer's disease, acute encephalitis, brain injury, multiple sclerosis including demyelation and oligiodendrocyte loss in multiple sclerosis, advanced cancer, lymphoid malignancies, tumor metastasis, pancreatitis, including systemic complications in acute pancreatitis, impaired wound healing in infection, inflammation and cancer, periodontal diseases, corneal ulceration, proteinuria, myelodysplastic syndromes, systemic lupus erythematosus, biliary cirrhosis, bowel necrosis, psoriasis, radiation injury, toxicity following administration of monoclonal antibodies such as OKT3, host-versus-graft reactions including ischemia reperfusion . injury and allograft rejections including kidney, liver, heart, and skin allograft rejections, lung allograft rejection including chronic lung allograft rejection (obliterative bronchitis) as well as complications due to total hip replacement, and infectious diseases including tuberculosis, Helicobacter pylori infection during peptic ulcer disease, Chaga's disease resulting from Trypanosoma cruzi infection, effects of Shiga-like toxin resulting from E. coli infection, effects of enterotoxin A resulting from Staphylococcus infection, meningococcal infection, and infections from Borrelia burgdorferi, Treponema pallidum, cytomegalovims, influenza vims, Theiler's encephalpmyelitis. vims, and the human immunodeficiency vims (HIV).
The present invention, therefore, provides hetaryl urea compounds containing nitrogen hetero-atoms, and compositions which comprise hetaryl urea compounds containing nitrogen heteroatoms and a method for treating of p38-mediated disease states in humans or mammals, e.g., disease states mediated by one or more cytokines or proteolytic enzymes produced and/or activated by a p38 mediated process. In these methods a compound of formula I, or a pharmaceutically acceptable salt thereof, is administered, A - D - B (I) .
In formula I,
D is -NH-C(O)-NH-,
A is a substituted or unsubstituted pyridyl, quinolinyl or isoquinoliyl group,
B is a substituted or unsubstituted, up to tricyclic aryl or heteroaryl moiety of up to 50 carbon atoms with a cyclic stmcture bound directly to D containing at least 5 members with 0-4 members of the group consisting of nitrogen, oxygen and sulfur.
The moiety B is preferably either a substituted or unsubstituted bridged cyclic stmcture of up to 30 carbon atoms of the formula -L- ML1)^ a substituted or unsubstituted 6 member cyclic aryl moiety or hetaryl moiety or a substituted or unsubstituted 2-3 fused ring stmcture (aryl, hetaryl or both). For Example, B can be phenyl, substituted phenyl, napthyl substituted napthyl, pyridinyl, substituted pyridinyl, pyrimidinyl, substituted pyrimidinyl, quinolinyl, substituted quinolinyl, isoquinolinyl, substituted isoquinolinyl or of the formula -L( Ll)q.
L in the formula -LζML^q is a 5 or 6 membered cyclic stmcture bond directly to D, L1 is a cyclic moiety of at least 5 members,
M is a bridging group having at least one atom and q is an integer of 1-3. Each cyclic stmcture of L and L1 contains from 0-4 members of the group consisting of N, O and S.
The substituents for the groups of A are preferably selected from the group consisting of halogen, up to per-halo, and Wn, where n is 0-3 and each W is independently selected from the group consisting of C^o alkyl, C^o alkoxy, C .ιo cycloalkyl having at least five cyclic members and 0-3 heteroatoms, C2.10 alkenyl, C O alkenoyl, substituted CMO alkyl, substituted C O alkoxy, a substituted C3.10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O; substituted C -ιo alkenyl, substituted CMO alkenoyl, C6-C14 aryl, C -C2 alkaryl, C -C2 aralkyl, C -Cι2 hetaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S, C -C23 alkheteroaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S, substituted C6-C1 aryl, substituted C3-C12 hetaryl having at least 5 members and 1-3 heteroatoms selected from O, N and S, substituted C7- C2 aralkyl, substituted C7-C2 alkaryl, substituted C4-C23 alkheteroaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S; -CN, -CO2R7, - C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, -NR7R7', -NR7C(O)OR7', -NR7C(O)R7', with each R7 and R7 independently selected from hydrogen, CMO alkyl, C O alkoxy, C2-ιo alkenyl, C O alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted Ci- 10 alkoxy, up to per halosubstituted C2-10 alkenyl and up to per halosubstituted CMO alkenoyl, Cs- o cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from O, S and N, C6-C14 aryl, C3- 0 hetaryl having at least 5 cyclic members and 0-3 heteroatoms selected from O, S and N, up to per halosubstituted C o cycloalkyl having at least 6 cyclic members and 0-3 heteroatoms selected from O, S and N, up to per halo substituted C6-Cι4 aryl, and. up to per halo substituted C3- 0 hetaryl having at least 6 cyclic members and 0-3 heteroatoms selected from O, S and N.
Where W is a substituted group, it is substituted by halogen, up to per halo, or by one or more substituents independently selected from the group consiting of -CN, -CO2R7, -C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, -NR7R7', -NR7C(O)OR7', - NR7C(O)R7' with each R7 and R7 independently as defined above.
Where B, is substituted, the substituents are selected from the group consisting of halogen, up to per-halo, and Jn, where n is O-3" and "each" J is independently selected from the group consisting of -CN, -CO2R7, -C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, - NR7R7', -NR7C(O)OR7', -NR7C(O)R7', with each R7 and R7' independently as defined above , CMO alkyl, CMO alkoxy, C3.10 cycloalkyl having at least five cyclic members and 0-3 heteroatoms, C2-10 alkenyl, CMO alkenoyl,- C6.14 aryl, C3-12 hetaryl having at least five cyclic members and 1-3 heteroatoms selected from N, S and O, C -24 aralkyl, C .24 alkaryl, C4-C23 alkheteroaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S, substituted C O alkyl, substituted CMO alkoxy, substituted C3. 10 cycloalkyl having at least five cyclic members and 0-3 heteroatoms selected from N, S and O, substituted C2-ιo alkenyl substituted CMO alkenoyl, substituted C6 -C12 aryl, substituted C3-12 hetaryl having at least five cyclic members and 1-3 heteroatoms selected from N, S and O, substituted C7.24 alkaryl , substituted C -C24 aralkyl substituted C4-C23 alkheteroaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S, and -Q-Ar.
Where J is a substituted group, it is substituted by halogen, up to per halo, or by one or more substituents independently selected from the group consisting of -CN, - CO2R7, -C(O)-R7, -C(O)NR7R7', -OR7, -SR7, -NR7R7', -NO2, -NR7C(O)R7', and - NR7C(O)OR7' ; with each R7 and R7' independently as defined above for W.
Where J is -Q-Ar, Q is preferably a single bond, -O-, -S-, -N(R7)-, -(CH2)m-, -
C(O>, -CH(OH)-, -(CH2)mO-, -(CH2)mS-, -(CH2)mN(R7)-, -O(CH2)m- ,-CHX\ -CXa 2-, - S-(CH2)m- and -N(R7)(CH2)ra-, where m= 1-3, and X is halogen and
Ar is a 5- or 6-member aromatic stmcture. This aromatic stmcture of Ar a) contains 0-2 members selected from the group consisting of nitrogen, oxygen and sulfur, b) is optionally substituted by halogen, up to per-halo, and c) is optionally substituted by Znl, wherein nl is 0 to 3 and each Z is independently selected from the group consisting of -CN, -NO2, -OR7, - SR7 , -NR7R7', -NR7C(O)OR7', -NR7C(O)R7', with each R7 and R7' independently as defined above for W, C O -alkyl-,-. C O alkoxy, C2-W alkenyl and CMO alkenoyl halo substituted CMO alkyl up to per halo, halo substituted CMO alkoxy up to per halo, halosubstituted C2-10 alkenyl up to per halo and halosubstituted CMO alkenoyl up to per halo.
Where A is a substituted pyridyl, substituted quinolinyl or isoquinolinyl group, A is preferably substituted 1 .to 3 times by 1 or more substituents selected from the group consisting of-CN, halogen, CrC10 alkyl, Ci-Cio alkoxy, -OH, up to per halo substituted
C1-C10 alkyl, up to per halo substituted C1- 0 alkoxy or phenyl substituted by halogen up to per halo. Where B is -LCML1),,, L1 can be substituted by the substituents -C(O)Ra, - C(NRa)Rb, -C(O)NRaRb, -SO2NRaRb, -and -SO2Ra wherein each Ra and R are independently hydrogen or a carbon based moiety of up to 24 carbon atoms, optionally containing heteroatoms selected from N, S and O, and optionally substituted by halogen.
Ra and Rb preferably are each, independently, CMO alkyl, C O alkoxy, C3.10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O, C2-10 alkenyl, CMO alkenoyl, C6-u aryl, C3.12 hetaryl having 1-3 heteroatoms selected from N, S and O, C7.24 aralkyl, C -24 alkaryl, substituted CMO alkyl, substituted CMO alkoxy, substituted C3-10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O, substituted C2-10 alkenyl, substituted C O alkenoyl, substituted C6 -C14 aryl, substituted C32 hetaryl having at least 5 cyclic members and 1-3 heteroatoms selected from N, S and O, substituted C .24 alkaryl or substituted C -C24 aralkyl. Where Ra and/or R are a substituted group, they are substituted by halogen up to per halo hydroxy, CMO alkyl, C3.12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C3.12 hetaryl having 1-3 heteroatoms selected from N, S and O, CMO alkoxy, C6. 12 aryl, Cι-6 halo substituted alkyl up to per halo alkyl, C6-Ci2 halo substituted aryl up to per halo aryl, C3-C12 halo substituted cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C3-Cι2 hetaryl up to per halo heteraryl, halo substituted C -C24 aralkyl up to per halo aralkyl, halo substituted C -C2 alkaryl up to per halo alkaryl, and -C(O)Rg.
Ra and Rb can also be
-OSi(Rf)3 where Rf is hydrogen or a carbon based moiety of up to 24 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen, hydroxy and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen; or
b) 'bound together to form a 5-7 member heterocyclic stmcture of 1-3 heteroatoms selected from N, S and O, or a substituted 5-7 member heterocyclic stmcture of 1-3 heteroatoms selected from N, S and O substituted by halogen, hydroxy or carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen; or
c) one of Ra or Rb can be -C(O)-, a C!-C5 divalent alkylene group or a substituted C1-C5 divalent alkylene group bound to the moiety L to form a cyclic stmcture with at least 5 members, wherein the substituents of the substituted Cι-C5 divalent alkylene group are selected from the group consisting of halogen, hydroxy, and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen.
The carbon based moieties of Rf and the substituents on Ra and Rb include CMO alkyl, CMO alkyl, CMO alkoxy, C3-C10 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C_-n aryl, C3-C12 hetaryl having 1-3 heteroatoms selected from O, S and N, C -24 aralkyl, substituted CMO alkyl, substituted C1-C10 alkoxy, substituted C3-C12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, substituted C3-C12 heteraryl having 1-3 heteroatoms selected from O, S, and N, substituted C6-i2 aryl, and substituted C .24 alkaryl, where Rf is a substituted group it is substituted halogen up to per halo, hydroxy, CMO alkyl, C3-12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C3.12 hetaryl having 1-3 heteroatoms selected from N, S and O, CMO alkoxy, C6-π aryl, Cy.-C24 alkaryl, C7-C24 aralkyl, Cι-6 halo substituted alkyl up to per halo alkyl, C6-C12 halo substituted aryl up to per halo aryl, C3-Cι2 halo substituted cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C_-Cu hetaryl up to per halo heteraryl, halo substituted C -C2 aralkyl up to per halo aralkyl, halo substituted C7-C24 alkaryl up to per halo alkaryl, and -C(O)Rg;
where Rg is CMO alkyl; -CN, -CO2Rd, -ORd, -SR_, -NO2, -C(O) R-, -NRjRe, -NRj C(O)ORe and -NRj C(O)Re, and Rd and R» are independently selected from the group consisting of hydrogen, CMO, alkyl, CMO alkoxy, C3-10 cycloalkyl having 0-3 heteroatoms selected from O, N and S, C6-i2 aryl, C3-C12 hetaryl with 1-3 heteroatoms selected from O, N and S and C7-C24 aralkyl, C -C2 alkaryl, up to per halo substituted Ci-do alkyl, up to per halo substituted C3-C10 cycloalkyl having 0-3 heteroatoms selected from O, N and S, up to per halo substituted C6-Cι4 aryl, up to per halo substituted C3-C12 hetaryl having 1-3 heteroatoms selected from O, N, and S, halo substituted C7-C 24 alkaryl up to per halo alkaryl, and up to per halo substituted C7-C24 aralkyl.
The bridging group M in the formula -L-CML1^, for B is preferably selected from the group consisting of -O-, -S-, -N(R7)-, -(CH2)m-, -C(O)-, -CH(OH)-, -(CH2)mO-, -( CH2)mS-, -( CH2)m N(R7)-, -O(CH2)m- CHX\ -CXa 2-, -S-(CH2)m-, -N(R7)(CH2)m- and
-CRaRb- where m=l-3, Xa is hydrogen, R7, Ra and R are as defined above and q is 1.
More preferably, M is -O-, -CH2-3 -S-, -NH-, -C(O)-, -O-CH2- and -CH2-O-.
The moieties L and L1 in the formula -L^ML1^ for B are typically each, independently, a substituted aryl moiety having at least 6 cyclic members, a substituted heterocyclic moiety having at least 5 cyclic members, an unsubstituted aryl moiety having at least 6 cyclic members or an unsubstituted heterocyclic moiety having at least 5 cyclic members. The heterocyclic and hetaryl moietes for L and L' typically have 1 to 4 members selected from the group of hetero atoms consisting of nitrogen, oxygen and sulfur with the balance of the hetaryl or heterocyclic moiety being carbon. More typical moieties for L1 and L are selected from the group consisting of thiophene, substituted thiophene, phenyl, substituted phenyl, pyridinyl, substituted pyridinyl, pyrimidinyl and substituted pyrimidinyl.
Where L is substituted or L1 is additionally substituted, the substituents are selected from the group consisting of halogen, up to per-halo, and Jn where n is 0-3, and J is as defined above.
Preferred compounds of Formula I include those wherein the cyclic structures of B and L bound directly to D are not substituted in the ortho position by-OH.
The invention provides hetaryl compounds containing nitrogen hetero-atoms of formula π
A'-D-B'(π),
wherein D is as defined above for formula I and A' is either a substituted t- butylpyridyl, unsubstituted t-butylpyridyl, substituted (trifluoromethyl)pyridyl, unsubstituted (trifluoromethyl)pyridyl, substituted isopropylpyridyl, unsubstituted sopropylpyridyl, substituted (2-methylr2-butyl)pyridyl, unsubstituted (2-methyl-2- butyl)pyridyl, substituted (3-ethyl-3-pentyl)pyridyl, unsubstituted (3-ethyl-3- pentyl)pyridyl, substituted isoquinolinyl, unsubstituted isoquinolinyl or unsubstituted quinolinyl.
B' can be a substituted or unsubstituted 6 member cyclic aryl ring, at least a 5 member heterocylic ring or from 2-3 fused rings of up to 30 carbon atoms (aryl hetaryl or both).
B' also includes structures of formula III
Figure imgf000015_0001
either substituted or unsubstituted, where A' is substituted or unsubstituted t-butylyridyl, (trifluoromethyl)pyridyl, isopropylpyridyl, (2-methyl-2-butyl)pyridyl or (3-ethyl-3- pentyl)pyridyl.
B' also includes structures of the formula IV
Figure imgf000015_0002
either substituted or unsubstituted where A' is a substituted isoquinolinyl, unsubsituted isoquinolinyl or unsubstituted quinolinyl group.
The substituents for the substituted groups of A' are as defined for A. Preferred substituents are selected from the group consisting of up to per halo substituted CMO alkoxy, up to per halo substituted CMO alkyl and C^o heteroyclic moieties comprising 1 to 2 heteroatoms selected from the group consisting of nitrogen, oxygen and sulfur. Where B' is a 6 member cyclic aryl ring, at least a 5 member heterocyclic ring o'r 2-3 fused rings of up to 30 carbon atoms, the substituents for B' are selected from the group consisting of halogen, up to per-halo-, and J! n where n=0-3 and each J.1 is independently selected from the group consisting of -CN, halogen, OH, -CO2R7,- C(O)NR7R7', -C(O)-R7, NO2, OR7, SR7, NR7R7', NR7C(O)OR7', NR7C(O)R7', Cι.1QalkyL CMO alkoxy, C2-10 alkenyl, CMO alkenoyl, substituted CMO alkyl, substituted CMO. alkoxy, substituted C2-10 alkenyl, and substituted C O alkenoyl, with R7 and R7' are, independently, as defined above.
When B' is of formula HI or IN, the substituents are selected from the group consisting of - CΝ, halogen, OH, -ΝO2, -OR7, -SR7, -NR7R7', -NR7C(O)OR7', CM0 alkyl, CMO alkoxy, C2-10 alkenyl, CMO alkenoyl, substituted CMO alkoxy, substituted C2-10 alkenyl and substituted alkenoyl CMO, with R7 and R7' as defined above.
Ra and Rb preferably are each, independently, CMO alkyl, C O alkoxy, C3-10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms, C2-10 alkenyl, CMO alkenoyl, C6.12 aryl, C3.12 hetaryl having at least 5 cyclic members and 1-3 heteroatoms selected from N, S and O, C 24 aralkyl, C7.2 alkaryl, substituted C O alkyl, substituted CMO alkoxy, substituted CMO cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O, substituted C2-10 alkenyl, substituted C O alkenoyl, substituted C6 -C14 aryl, substituted C3-12 hetaryl having at least 5 cyclic members and 1-3 heteroatoms selected from N, S and O, substituted C7.24 alkaryl or substituted C -C2 aralkyl, where Ra and/or Rb are a substituted group, they are preferably substituted by halogen up to per halo.
Where B' is a substituted pyridyl, substituted quinolinyl or isoquinolinyl group, B' is preferably substituted 1 to 3 times by 1 or more substituents selected from the group consisting of-CN, halogen, C1-C10 alkyl, C1-C10 alkoxy, -OH, up to per halo substituted d-do alkyl, up to per halo substituted d-do alkoxy or phenyl substituted by halogen up to per halo.
In Formulae I, and II suitable hetaryl groups include, but are not limited to, 4-12 carbon-atom aromatic rings or ring systems containing 1-3 rings, at least one of which is aromatic, in which one or more, e.g., 1-4 carbon atoms in one or more of the rings can be replaced by oxygen, nitrogen or sulfur atoms. Each ring typically has 5-7 member atoms. For example, B can be 2- or 3 -furyl, 2- or 3-thienyl, 2- or 4-triazinyl, 1-, 2- or 3-pyrrolyl, 1-, 2-, 4- or 5-imidazolyl, 1-, 3-, 4- or 5-pyrazolyl, 2-, 4- or 5-oxazolyl, 3-, 4- or 5- isoxazolyl, 2-, 4- or 5-thiazolyl, 3-, 4- or 5-isothiazolyl, 2-, 3- or 4-pyridyl, 2-, 4-, 5- or 6- pyrimidinyl, 1,2,3-triazol-l-, -4- or -5-yl, 1,2,4-triazol-l-, -3- or -5-yl, 1- or 5-tetrazolyl, l,2,3-oxadiazol-4- or -5-yl, l,2,4-oxadiazol-3- or -5-yl, l,3,4-thiadiazol-2- or -5-yl, l,2,4-oxadiazol-3- or -5-yl, l,3,4-thiadiazol-2- or -5-yl, l,3,4-thiadiazol-3- or -5-yl, l,2,3-thiadiazol-4- or -5-yl, 2-, 3-, 4-, 5- or 6-2H-thioρyranyl, 2-, 3- or 4-4H-thiopyranyl, 3- or 4-pyridazinyl, pyrazinyl, 2-, 3-, 4-, 5-, 6- or 7-benzofuryL 2-, 3-, 4-, 5-, 6- or 7- benzothienyl, 1-, 2-, 3-, 4-, 5-, 6- or 7-indolyl, 1-, 2-, 4- or 5-benzimidazolyl, 1-, 3-, 4-, 5- , 6- or 7-benzopyrazolyl, 2-, 4-, 5-, 6- or 7-benzoxazolyl, 3-, 4-, 5- 6- or 7-benzisoxazolyl, 1-, 3-, 4-, 5-, 6- or 7-benzothiazolyl, 2-, 4-, 5-, 6- or 7-benzisothiazolyl, 2-, 4-, 5-, 6- or 7- benz-l,3-oxadiazolyl, 2-, 3-, 4-, 5-, 6-, 7- or 8-quinolinyl, 1-, 3-, 4-, 5-, 6-, 7-, 8- isoquinolinyl, 1-, 2-, 3-, 4- or 9-carbazolyl, 1-, 2-, 3-, 4-, 5-, 6-, 1-, 8- or 9-acridinyl, or 2-, 4-, 5-, 6-, 7- or 8-quinazolinyl, or additionally optionally substituted phenyl, 2- or 3-' thienyl, 1,3,4-thiadiazolyl, 3-pyrryl, 3-pyrazolyl, 2-thiazolyl or 5-thiazolyl, etc. For example, B can be 4-methyl-phenyl, 5-methyl-2 -thienyl, 4-methyl-2 -thienyl, l-methyl-3- pyrryl, l-methyl-3-pyrazolyl, 5-methyl-2-thiazolyl or 5-methyl-l,2,4-thiadiazol-2-yl.
Suitable alkyl groups and alkyl portions of groups, e.g., alkoxy, etc. throughout include methyl, ethyl, propyl, butyl, etc., including all straight-chain and branched isomers such -as, isopropyl, isobutyl, .sec-butyl, tert-butyl, etc.
Suitable aryl groups which do not contain heteroatoms include, for example, phenyl and 1- and 2-naphthyl.
The term "cycloalkyl", as used herein, refers to cyclic structures with or without alkyl substituents such that, for example, "C cycloalkyl" includes methyl substituted cyclopropyl groups as well as cyclobutyl groups. The term "cycloalkyl", as used herein also includes saturated heterocyclic groups. Suitable halogen groups include F, Cl, Br, and/or I, from one to per-substitution (i.e. all H atoms on a group replaced by a halogen atom) being possible where an alkyl group is substituted by halogen, mixed substitution of halogen atom types also being possible on a given moiety.
The present invention is also directed to pharmaceutically acceptable salts of formula II. Suitable pharmaceutically acceptable salts are well known to those skilled in the art and include basic salts of inorganic and organic acids, such as hydrochloric acid, hydrobromic acid, sulphuric acid, phosphoric acid, methanesulphonic acid, trifluoromethanesulfonic acid, benzenesulphonic acid, j?-toluenesulfonic acid, 1- naphthalenesulfonic acid, 2-naphthalenesulfonic acid, acetic acid, trifluoroacetic acid, malic acid, tartaric acid, citric acid, lactic acid, oxalic acid, succinic acid, fumaric acid, maleic acid, benzoic acid, salicylic acid, phenylacetic acid, and mandelic acid. In addition, pharmaceutically acceptable salts include acid salts of inorganic bases, such as salts containing alkaline cations (e.g., Li+ Na+ or K+), alkaline earth cations (e.g., Mg+2 , Ca+2 or Ba+2), the ammonium cation, as well as acid salts of organic bases, including aliphatic and aromatic substituted ammonium, and quaternary ammonium cations, such as those arising from protonation or peralkylation of triethylamine, N,N-diethylamine, N,N-dicyclohexylamine, lysine, pyridine, N,N-dimethylaminopyridine (DMAP), 1,4- diazabiclo[2.2.2]octane (DABCO), l,5-diazabicyclo[4.3.0]non-5-ene (DBΝ) and 1,8- diazabicyclo[5.4.0]undec-7-ene (DBU).
A number of the compounds of Formulae I and 11 possess asymmetric carbons and can therefore exist in racemic and optically active forms. Methods of separation of enantiomeric and diastereomeric mixtures are well known to one skilled in the art. The present invention encompasses any racemic or optically active form of compounds described in Formula II which possess progesterone receptor binding activity. General Preparative Methods
The compounds of Formulae I and J3 may be prepared by the use of known chemical reactions and procedures, some from starting materials which are commercially available. Nevertheless, general preparative methods are provided below to aid one skilled in the art in synthesizing these compounds, with more detailed examples being provided in the Experimental section which follows.
Substituted and unsubstituted aminoquinolines, aminoisoquinolines and aminopyridines maybe prepared using standard methods (see, for example: A.R. Katritzky et al. (Eds.). Comprehensive Heterocyclic Chemistry II, Vol. 5. M.H. Palmer. Heterocyclic
Compounds; Arnold Ltd., London (1967). C.K. Esser et al. WO 96/18616. C J. Donahue et al. Inorg. Chem. 30, 1991, 1588. E. Cho et al. WO 98/00402. A. Cordi et al. Bioorg. Med. Chem.. 3, 1995, 129). In addition, many aminoquinolines, aminoisoquinolines and aminopyridines are commercially available.
Substituted anilines may be generated using standard methods (March. Advanced Organic Chemistry, 3r Ed.; John Wiley: New York (1985). Larock. Comprehensive Organic Transformations; VCH Publishers: New York (1989)). As shown in Scheme I, aryl amines are commonly synthesized by reduction of nitroaryls using a metal catalyst, ' such as Ni, Pd, or Pt, and H or a hydride transfer agent, such as formate, cyclohexadiene, or a borohydride (Rylander. Hydrogenation Methods; Academic Press: London, UK (1985)). Nitroaryls may also be directly reduced using a strong hydride source, such as LiAlH (Seyden-Penne. Reductions by the Alumino- and Borohydrides in Organic Synthesis; VCH Publishers: New York (1991)), or using a zero valent metal, such as Fe, Sn or Ca, often in acidic media. Many methods exist for the synthesis of nitroaryls
(March. Advanced Organic Chemistry, 3rd Ed.; John Wiley: New York (1985). Larock. Comprehensive Organic Transformations; VCH Publishers: New York (1989)). H2 / catalyst
(eg. Ni, Pd, Pt) \
\
ArN02 ^ ArNH2
\ M(0) y
(eg. Fe, Sπ, Ca)
Scheme I Reduction of Nitroaryls to Aryl Amines
Nitroaryls are commonly formed by electrophilic aromatic nitration using HNO , or an alternative NO2 + source. Nitroaryls may be further elaborated prior to reduction. Thus, nitroaryls substituted with
HN03 Ar-H ► ArN02
potential leaving groups (eg. F, Cl, Br, etc.) may undergo substitution reactions on treatment with nucleophiles, such as thiolate (exemplified in Scheme II) or phenoxide. Nitroaryls may also undergo Ullman-type coupling reactions (Scheme IT).
Figure imgf000020_0001
3
Scheme JJ Selected Nucleophilic Aromatic Substitution using Nitroaryls Nitroaryls may also undergo transition metal mediated cross coupling reactions. For example, nitroaryl electrophiles, such as nitroaryl bromides, iodides or triflates, undergo palladium mediated cross coupling reactions with aryl nucleophiles, such as arylboronic acids (Suzuki reactions, exemplified below), aryltins (StiUe reactions) or arylzincs (Negishi reaction) to afford the biaryl (5).
Figure imgf000021_0001
5
Either nitroaryls or anilines may be converted into the corresponding arenesulfonyl chloride (7) on treatment with chlorosulfonic acid. Reaction of the sulfonyl chloride with a fluoride source, such as KF then affords sulfonyl fluoride (8). Reaction of sulfonyl fluoride 8 with trimethylsilyl trifluoromethane in the presence of a fluoride source, such as tris(dimethylamino)sulfonium difluorotrimethylsiliconate (TASF) leads to the corresponding trifluoromethylsulfone (9). Alternatively, sulfonyl chloride 7 may be reduced to the arenethiol (10), for example with zinc amalgum. Reaction of thiol 10 with CHC1F2 in the presence of base gives the difluoromethyl mercaptan (11), which may be oxidized to the sulfone (12) with any of a variety of oxidants, including CrO3-acetic anhydride (Sedova et al. Zh. Org. Khim. 1970, 6, (568).
Figure imgf000022_0001
( e2N)3S e3SiF2 CHC!F2 e3SiCF3 base
Figure imgf000022_0002
[O]
Figure imgf000022_0003
Scheme HI Selected Methods of Fluorinated Aryl Sulfone Synthesis As shown in Scheme JN, non-symmetrical urea formation may involve reaction of an aryl isocyanate (14) with an aryl amine (13). The heteroaryl isocyanate may be synthesized from a heteroaryl amine by treatment with phosgene or a phosgene equivalent, such as trichloromethyl chloroformate (diphosgene), bis(trichloromethyl) carbonate (triphosgene), or N,N'-carbonyldiimidazole (GDI). The isocyanate may also be derived from a heterocyclic carboxylic acid derivative, such as an ester, an acid halide or an anhydride by a Curtius-type rearrangement. Thus, reaction of acid derivative 16 with an azide source, followed by rearrangement affords the isocyanate. The corresponding carboxylic acid (17) may also be subjected to Curtius-type rearrangements using diphenylphosphoryl azide (DPP A) or a similar reagent. Ar1-NH2 13
Figure imgf000023_0001
16 17
Scheme JN Selected Methods of Non-Symmetrical Urea Formation
Finally, ureas may be further manipulated using methods familiar to those skilled in the art.
The invention also includes pharmaceutical compositions including a compound of Formula I, and a physiologically acceptable carrier.
The compounds may be administered orally, dermally, parenterally, by injection, by inhalation or spray, or sublingually, rectally or vaginally in dosage unit formulations. The term 'administration by injection' includes intravenous, intraarticular, intramuscular, subcutaneous and parenteral injections, as well as use of infusion techniques. Dermal administration may include topical application or transdermal administration. One or more compounds may be present in association with one or more non-toxic pharmaceutically acceptable carriers and if desired other active ingredients.
Compositions intended for oral use may be prepared according to any suitable method known to the art for the manufacture of pharmaceutical compositions. Such compositions may contain one or more agents selected from the group consisting of diluents, sweetening agents, flavoring agents, coloring agents and preserving agents in order to provide palatable preparations. Tablets contain the active ingredient in admixture with non-toxic pharmaceutically acceptable excipients which are suitable for the manufacture of tablets. These excipients may be, for example, inert diluents, such as calcium carbonate, sodium carbonate, lactose, calcium phosphate or sodium phosphate; granulating and disintegrating agents, for example, corn starch, or alginic acid; and binding agents, for example magnesium stearate, stearic acid or talc. The tablets may be uncoated or they may be coated by known techniques to delay disintegration and adsoφtion in the gastrointestinal tract and thereby provide a sustained action over a longer period. For example, a time delay material such as glyceryl monostearate or glyceryl distearate may be employed. These compounds may also be prepared in solid, rapidly released form.
Formulations for oral use may also be presented as hard gelatin capsules wherein the active ingredient is mixed with an inert solid diluent, for example, calcium carbonate, calcium phosphate or kaolin, or as soft gelatin capsules wherein the active ingredient is mixed with water or an oil medium, for example peanut oil, liquid paraffin or olive oil.
Aqueous suspensions containing the active materials in admixture with excipients suitable for the manufacture of aqueous suspensions may also be used. Such excipients are suspending agents, for example sodium carboxymethylcellulose, methylcellulose, hydroxypropyl-methylcellulose, sodium alginate, polyvinylpyrrolidone, gum tragacanth and gum acacia; dispersing or wetting agents may be a naturally-occurring phosphatide, for example, lecithin, or condensation products of an alkylene oxide with fatty acids, for example polyoxyethylene stearate, or condensation products of ethylene oxide with long chain aliphatic alcohols, for example heptadecaethyleneoxycetanol, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol such as polyoxyethylene sorbitol monooleate, or condensation products of ethylene oxide with partial esters derived from fatty acids and hexitol anhydrides, for example polyethylene sorbitan monooleate. The aqueous suspensions may also contain one or more preservatives, for example ethyl, or «-propyl, -hydroxybenzoate, one or more coloring agents, one or more flavoring agents, and one or more sweetening agents, such as sucrose or saccharin. Dispersible powders and granules suitable for preparation of an aqueous suspension by the addition of water provide the active ingredient in admixture with a dispersing or wetting agent, suspending agent and one or more preservatives. Suitable dispersing or wetting agents and suspending agents are exemplified by those aheady mentioned above. Additional excipients, for example, sweetening, flavoring and coloring agents, may also be present.
The compounds may also be in the form of non-aqueous liquid formulations, e.g., oily suspensions which may be formulated by suspending the active ingredients in a vegetable oil, for example arachis oil, olive oil, sesame oil or peanut oil, or in a mineral oil such as liquid paraffin. The oily suspensions may contain a thickening agent, for example beeswax, hard paraffin or cetyl alcohol. Sweetening agents such as those set forth above, and flavoring agents may be added to provide palatable oral preparations. hese compositions may be preserved by the addition of an anti-oxidant such as ascorbic acid.
Pharmaceutical compositions of the invention may also be in the form of oil-in-water emulsions. The oil phase may be a vegetable oil, for example olive oil or arachis oil, or a mineral oil, for example liquid paraffin or mixtures of these. Suitable emulsifying agents may be naturally-occurring gums, for example gum acacia or gum tragacanth, naturally- occurring phosphatides, for example soy bean, lecithin, and esters or partial esters derived from fatty acids and hexitol anhydrides, for example sorbitan monooleate, and condensation products of the said partial esters with ethylene oxide, for example polyoxyethylene sorbitan monooleate. The emulsions may also contain sweetening and flavoring agents.
Syrups and elixirs may be formulated with sweetening agents, for example glycerol, propylene glycol, sorbitol or sucrose. Such formulations may also contain a demulcent, a preservative and flavoring and coloring agents. The compounds may also be adirώiistered in the form of suppositories for rectal or vaginal administration of the dmg. These compositions can be prepared by mixing the drug with a suitable non-irritating excipient which is solid at ordinary temperatures but liquid at the rectal or vaginal temperature and will therefore melt in the rectum or vagina to release the drug. Such materials include cocoa butter and polyethylene glycols.
Compounds of the invention may also be administered transdermally using methods known to those skilled in the art (see, for example: Chien; "Transdermal Controlled Systemic Medications"; Marcel Dekker, Inc.; 1987. Lipp et al. WO94/04157 3Mar94). For example, a solution or suspension of a compound of Formula I in a suitable, volatile solvent optionally containing penetration enhancing agents can be combined with additional additives known to those skilled in the art, such as matrix materials and bacteriocides. After sterilization, the resulting mixture can be formulated following known procedures into dosage forms. In addition, on treatment with emulsifying agents and water, a solution or suspension of a compound of Formula I may be formulated into a lotion or salve.
Suitable solvents for processing transdermal delivery systems are known to those skilled in the art, and include lower alcohols such as ethanol or isopropyl alcohol, lower ketones such as acetone, lower carboxylic acid esters such as ethyl acetate, polar ethers such as tetrahydrofuran, lower hydrocarbons such as hexane, cyclohexane or benzene, or halogenated hydrocarbons such as dichlorome bane, chloroform, trichlorotrifluoroethane, or trichlorofluoroethane. Suitable solvents may also include mixtures one or more materials selected from lower alcohols, lower ketones , lower carboxylic acid esters, polar ethers, lower hydrocarbons, halogenated hydrocarbons.
Suitable penetration enhancing materials for transdermal delivery systems are known to those skilled in the art, and include, for example, monohydroxy or polyhydroxy alcohols such as ethanol, propylene glycol or benzyl alcohol, saturated or unsaturated C8-C18 fatty alcohols such as lauryl alcohol or cetyl alcohol, saturated or unsaturated C8-Cι8 fatty acids such as stearic acid, saturated or unsaturated fatty esters with up to 24 carbons such as methyl, ethyl, propyl, isopropyl, n-butyl, sec-butyl isobutyl tert-butyl or monoglycerin esters of acetic acid, capronic acid, lauric acid, myristinic acid, stearic acid, or palmitic acid, or diesters of saturated or unsaturated dicarboxylic acids with a total of up to 24 carbons such as diisopropyl adipate, diisobutyl adipate, diisopropyl sebacate, diisopropyl maleate, or diisopropyl fumarate. Additional penetration enhancing materials include phosphatidyl derivatives such as lecithin or cephalin, terpenes, amides, ketones, ureas and their derivatives, and ethers such as dimethyl isosorbid and diethyleneglycol monoethyl ether. Suitable penetration enhancing formulations may also include mixtures one or more materials selected from monohydroxy or polyhydroxy alcohols, saturated or unsaturated C8-C18 fatty alcohols, saturated or unsaturated C8-C18 fatty acids, saturated or unsaturated fatty esters with up to 24 carbons, diesters of saturated or unsaturated dicarboxylic acids with a total of up to 24 carbons, phosphatidyl derivatives, terpenes, amides, ketones, ureas and their derivatives, and ethers.
Suitable binding materials for transdermal delivery systems are known to those skilled in the art and include polyacrylates, silicones, polyurethanes, block polymers, styrene- butadiene coploymers, and natural and synthetic rubbers. Cellulose ethers, derivatized polyethylenes, and silicates may also be used as matrix components. Additional additives, such as viscous resins or oils may be added to increase the viscosity of the matrix.
For all regimens of use disclosed.hexem,for compounds of Formulae I and II, the daily oral dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight. The daily dosage for administration by injection, including intravenous, intramuscular, subcutaneous and parenteral injections, and use of infusion techniques will preferably be from 0.01 to 200 mg/Kg of total body weight. The daily rectal dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight. The daily vaginal dosage regimen will preferably be from 0.01 to 200 mg/Kg of total body weight. These daily dosages can be administered incrementally during the day, on a weekly basis on a biweekly basis or longer periods. Long term dosages typically range from 100-600 mg/kg of total body weight and preferably range from 100-400 mg/kg of total body weight.
Dosages for oral, vaginal and rectal administration and administration by injection can range from 0.01 mg - 600 mg/kg of total body weight.
The daily topical dosage regimen will preferably be from 0.1 to 200 mg administered between one to four times daily. The transdermal concentration will preferably be that required to maintain a daily dose of from 0.01 to 200 mg Kg. The daily inhalation dosage regimen will preferably be from 0.01 to 10 mg/Kg of total body weight.
It will be appreciated by those skilled in the art that the particular method of administration will depend on a variety of factors, all of which are considered routinely when administering therapeutics. It will also be understood, however, that the specific dose level for any given patient will depend upon a variety of factors, including, but not limited to the activity of the specific compound employed, the age of the patient, the body weight of the patient, the general health of the patient, the gender of the patient, the diet of the patient, time of administration, route of administration, rate of excretion, drug combinations, and the severity of the condition undergoing therapy. It will be further appreciated by one skilled in the art that the optimal course of treatment, ie., the mode of treatment and the daily or weekly number of doses of a compound of Formulae I or JJ or a pharmaceutically acceptable salϋhereof given for a defined number of days, can be ascertained by those skilled in the art using conventional treatment tests.
The entire disclosure of all applications, patents and publications cited above and below are hereby incorporated by reference, including provisional application Serial No.
60/115,878 filed January 13, 1999 and non-provisional applications
Serial No. 09/778,039, filed Febmary 7, 2001, and
Serial No. 09/257,265, filed Febmary 25, 1999 and Serial No. 09/425,229, filed October 22, 1999. The compounds of formulae I and II are producible from known compounds (or from starting materials which, in turn, are producible from known compounds), e.g., through the general preparative methods shown below. ' The activity of a given compound to inhibit raf kinase can be routinely assayed, e.g., according to procedures disclosed below. The following examples are for illustrative purposes only and are not intended, nor should they be construed to limit the invention in any way.
EXAMPLES
All reactions were performed in flame-dried or oven-dried glassware under a positive pressure of dry argon or dry nitrogen, and were stirred magnetically unless otherwise indicated. Sensitive liquids and solutions were transferred via syringe or cannula, and introduced into reaction vessels through mbber septa. Unless otherwise stated, the term 'concentration under reduced pressure' refers to use of a Buchi rotary evaporator at approximately 15 mmHg. Unless otherwise stated, the term 'under high vacuum' refers to a vacuum of 0.4 - 1.0 mmHg.
All temperatures are reported in degrees Celsius (°C). Unless otherwise indicated, all parts and percentages are by weight.
Commercial grade reagents and solvents were used without further purification. N- cyclohexyl-N'-(methylpolystyrene)carbodiimide was purchased from Calbiochem- Νovabiochem Corp. 5-(Trifluoromethyl)-2-aminopyridine, 3-aminoqunioline, 3- aminoisoquinoline, l-(4-methylpiperazinyl)-3-aminoisoquinoline, ethyl 4- isocyanatobenzoate, N-acetyl-4-chloro-2-methoxy-5-(trifluoromethyl)aniline, 4-(4- nitrobenzyl)pyridine, 4-phenoxyaniline, 4-(4-methylphenoxy)aniline, 4-(4- chlorophenoxy)aniline and 4-chloro-3-(trifluoromethyl)phenyl isocyanate were purchased and used without further purification. Syntheses of 2-amino-4-tert-butylpyridine (C.K. Esser et al. WO 96/18616; CJ. Donahue et al. Inorg. Chem. 30, 1991, 1588), 3-amino-2- methoxyquinoline (E. Cho et al. WO 98/00402; A. Cordi et al. EP 542,609; IBID Bioorg. Med. Chem.. 3, 1995, 129), 4-(3-carbamoylphenoxy)-l -nitrobenzene (K. JJ awa Yakugaku Zasshi 79, 1959, 760; Chem. Abstr. 53, 1959, 12761b), 4-[(4- methoxyphenyl)methylamino]aniline (P. Brenneisen et al. US 3,755,406; IBID US 3,839,582; IBID DE 1,935,388), 4-(4-pyridylcarbonyl)amline (MX. Carmello et al. Pestic. Sci. 45, 1995, 227), 3-tert-butylphenyl isocyanate (O. Rohr et al. DE 2,436,108) and 2-methoxy-5-(triflιιoromethyl)phenyl isocyanate (K. friukai et al. JP 42,025,067; IBID Kogyo Kagaku Zasshi 70, 1967, 491) have previously been described. Thin-layer chromatography (TLC) was performed using Whatman® pre-coated glass- backed silica gel 60A F-254 250 μm plates. Visualization of plates was effected by one or more of the following techniques: (a) ultraviolet illumination, (b) exposure to iodine vapor, (c) immersion of the plate in a 10% solution of phosphomolybdic acid in ethanol followed by heating, (d) immersion of the plate in a cerium sulfate solution followed by heating, and/or (e) immersion of the plate in an acidic ethanol solution of 2,4- dinitrophenylhydrazine followed by heating. Column chromatography (flash chromatography) was performed using 230-400 mesh EM Science® silica gel.
Melting points (mp) were determined using a Thomas-Hoover melting point apparatus or a Mettler FP66 automated melting point apparatus and are uncorrected. Fourier transform infrared sprectra were obtained using a Mattson 4020 Galaxy Series spectrophotometer. Proton (1H) nuclear magnetic resonance (NMR) spectra were measured with a General Electric GN-Omega 300 (300 MHz) spectrometer with either Me4Si (δ 0.00) or residual protonated solvent (CHC13 δ 7.26; MeOH δ 3.30; DMSO δ 2.49) as standard. Carbon (13C) NMR spectra were measured with a General Electric GN-Omega 300 (75 MHz) spectrometer with solvent (CDC13 δ 77.0; MeOD-d3; δ 49.0; DMSO-d6 δ 39.5) as standard. Low resolution mass spectra (MS) and high resolution mass spectra (HRMS) were either obtained as electron impact (El) mass spectra or as fast atom bombardment (FAB) mass spectra. Electron impact mass spectra (EI-MS) were obtained, with a Hewlett Packard 5989A mass spectrometer equipped with a Vacumetrics Desorption Chemical loniza ion-Probe for sample introduction. The ion source was maintained at 250 °C. Electron impact ionization was performed with electron energy of 70 eV and a trap current of 300 μA. Liquid-Cesium secondary ion mass spectra (FAB-MS), an updated version of fast atom bombardment were obtained using a Kratos Concept 1-H spectrometer. Chemical ionization mass spectra (CI-MS) were obtained using a Hewlett Packard MS-Engine (5989A) with methane or ammonia as the reagent gas (lxlO"4 torr to 2.5x10"4 torr). The direct insertion desorption chemical ionization (DCI) probe (Vaccumetrics, Inc.) was ramped from 0-1.5 amps in 10 sec and held at 10 amps until all traces of the sample disappeared ( ~l-2 min). Spectra were scanned from 50-800 amu at 2 sec per scan. HPLC - electrospray mass spectra (HPLC ES-MS) were obtained using a Hewlett-Packard 1100 HPLC equipped with a quaternary pump, a variable wavelength detector, a C-18 column, and a Finnigan LCQ ion trap mass spectrometer with electrospray ionization. Spectra were scanned from 120-800 amu using a variable ion time according to the number of ions in the source. Gas chromatography - ion selective mass spectra (GC-MS) were obtained with a Hewlett Packard 5890 gas chromatograph equipped with an HP-1 methyl silicone column (0.33 mM coating; 25 m x 0.2 mm) and a Hewlett Packard 5971 Mass Selective Detector (ionization energy 70 eV). Elemental analyses were conducted by Robertson Microlit Labs, Madison NJ.
All compounds displayed NMR spectra, LRMS and either elemental analysis or HRMS consistant with assigned structures.
List of Abbreviations and Acronyms:
AcOH acetic acid anh anhydrous atm atmosphere(s)
BOC tert-butoxycarbonyl
CDI 1,1' -carbonyl diimidazole cone concentrated dec decomposition
DMAC N,N-dimethylacetamide
DMPU. . l^-dimethyl-S^^^-tetrahydro^Cl^-pyrimidinone
DMF . N,N-dimethylformamide .
DMSO dimethylsulfoxide DPPA diphenylphosphoryl azide
EDCI 1 -(3-dimethylaminopropyl)-3-ethylcarbodiimide
EtOAc ethyl acetate
EtOH ethanol (100%)
Et2O diethyl ether Et3Ν triethylamine
HOBT 1-hydroxybenzotriazole m-CPBA 3-chloroperoxybenzoic acid
MeOH methanol pet. ether petroleum ether (boiling range 30-60 °C)
THF tetrahydrofuran
TFA trifluoroacetic acid
Tf trifluoromethanesulfonyl
A. General Methods for Synthesis of Substituted Anilines Al. General Method for Substituted Aniline Formation via Hydrogenation of a Nitroarene
Figure imgf000033_0001
4-(4-Pyridinylmethyl)aniline: To a solution of 4-(4-nitrobenzyl)pyridine (7.0 g, 32.68 mmol) in EtOH (200 mL) was added 10% Pd/C (0.7 g) and the resulting slurry was shaken under a H2 atmosphere (50 psi) using a Parr shaker. After 1 h, TLC and 1H-NMR of an aliquot indicated complete reaction. The mixture was filtered through a short pad of Celite®. The filtrate was concentrated in vacuo to afford a white solid (5.4 g, 90%): !H- NMR (DMSO-d6) δ 3.74 (s, 2H), 4.91 (br s, 2H), 6.48 (d, J=8.46 Hz, 2H), 6.86 (d, J=8.09 Hz, 2H), 7.16 (d, J=5.88 Hz, 2H), 8.40 (d, J=5.88 Hz, 2H); EI-MS m/z 184 (M+). This material was used in urea formation reactions without further purification.
A2. General Method for Substituted Aniline Formation via Dissolving Metal Reduction of a Nitroarene
4-(2-Pyridinylthio)aniline: To a solution of 4-(2 o-pyridinylthio)-l -nitrobenzene (Menai ST 3355A; 0.220 g, 0.95 mmol) and H2O (0.5 mL) in AcOH ( 5 mL) was added iron powder (0.317 g, 5.68 mmol) and the resulting slurry stirred for 16 h at room temp. The reaction mixture was diluted with EtOAc (75 mL) and H2O (50 mL), basified to pH 10 by adding solid K2CO3 in portions (Caution: foaming). The organic layer was washed with a saturated NaCl solution, dried (MgSO ), concentrated in vacuo. The residual solid was purified by MPLC (30% EtOAc/70% hexane) to give the desired product as a thick oil (0.135 g, 70%): TLC (30% EtOAc/70% hexanes) R 0.20. 5
A3 a. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000034_0001
Step 1. l-Methoxy-4-(4-nitrophenoxy)benzene: To a suspension of NaH.(95%, 1.50 g, 10 59 mmol) in DMF (100 mL) at room temp, was added dropwise a solution of 4- methoxyphenol (7.39 g, 59 mmol) in DMF (50 mL). The reaction was stirred 1 h, then a solution of l-fluoro-4-nitrobenzene (7.0 g, 49 mmol) in DMF (50 mL) was added dropwise to form a dark green solution. The reaction was heated at 95 °C overnight, then cooled to room temp., quenched with H2O, and concentrated in vacuo. The residue was 15 partitioned between EtOAc (200 mL) and H2O (200 mL). The organic layer was sequentially washed with H2O (2 x 200 mL), a saturated NaHCO3 solution (200 mL), and a saturated NaCl solution (200 mL), dried (Na2SO4), and concentrated in vacuo. The residue was triturated (Et2O/hexane) to afford l-methoxy-4-(4-nitrophenoxy)benzene . (12.2 g, 100%): 1H-NMR (CDC13) δ 3.83 (s, 3H), 6.93-7.04 (m, 6H), 8.18 (d, J=9.2 Hz, 20 2H); EI-MS m/z 245 (M+).
Figure imgf000034_0002
Step 2. 4-(4-Methoxyphenoxy)aniline: To a solution of l-methoxy-4-(4- nitrophenoxy)benzene (12.0 g, 49 mmol) in EtOAc (250 mL) was added 5% Pt/C (1.5 g) 25 and the resulting slurry was shaken under a H2 atmosphere (50 psi) for 18 h. The reaction mixture was filtered through a pad of Celite® with the aid of EtOAc and concentrated in vacuo to give an oil which slowly solidified (10.6 g, 100%): 1H-NMR (CDCI3) δ 3.54 (br s, 2H), 3.78 (s, 3H), 6.65 (d, J=8.8 Hz, 2H), 6.79-6.92 (m, 6H); EI-MS m/z 215 (M+). A3b. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000035_0001
Step 1. 3-(Trifluoromethyl)-4-(4-pyridinylthio)nitrobenzene: A solution of 4- mercaptopyridine (2.8 g, 24 mmoles), 2-fluoro-5-nitrobenzotrifluoride (5 g, 23.5 mmoles), and potassium carbonate (6.1 g, 44.3 mmoles) in anhydrous DMF (80 mL) was stirred at room temperature and under argon overnight. TLC showed complete reaction. The mixture was diluted with Et2O (100 mL) and water (100 mL) and the aqueous layer was back-extracted with Et2O (2 x 100 mL). The organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO4), and concentrated under reduced pressure. The solid residue was triturated with Et2O to afford the desired product as a tan solid (3.8 g, 54%): TLC (30% EtOAc/70% hexane) R 0.06; 1H-NMR (DMSO-d6) δ 7.33 (dd, J=l,2, 4.2 Hz, 2H), 7.78 (d, J=8.7 Hz, IH), 8.46 (dd, J=2.4, 8.7Hz, IH), 8.54-8.56 (m, 3H).
Figure imgf000035_0002
Step 2. 3-(Trifluoromethyl)-4-(4-pyridinylthio)aniline: A slurry of 3-trifluoromethyl- 4-(4-pyridinylthio)nitrobenzene (3.8 g, 12.7 mmol), iron powder (4.0 g, 71.6 mmol), acetic acid (100 mL), and water (1 mL) were stirred at room temp, for 4 h. -Tho mixture was diluted with Et2O (100 mL) and water (100 mL). The aqueous phase was adjusted to pH 4 with a 4 N NaOH solution. The combined organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO ), and concentrated under reduced pressure. The residue was filtered through a pad of silica (gradient from 50% EtO Ac/50% hexane to 60% EtO Ac/40% hexane) to afford the desired product (3.3 g): TLC (50% EtOAc/50% hexane) R 0.10; 1H-NMR (DMSO-d6) δ 6.21 (s, 2H), 6.84-6.87 (m, 3H), 7.10 (d, J=2.4 Hz, IH), 7.39 (d, J=8.4 Hz, IH), 8.29 (d, J=6.3 Hz, 2H). A3c. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000036_0001
Step 1. 4-(2-(4-Phenyl)thiazolyl)thio-l -nitrobenzene: A solution of 2-mercapto-4- phenylthiazole (4.0 g, 20.7 mmoles) in DMF (40 mL) was treated with l-fluoro-4- nitrobenzene (2.3 mL, 21.7 mmoles) followed by K2CO3 (3.18 g, 23 mmol), and the mixture was heated at approximately 65 °C overnight. The reaction mixture was then diluted with EtOAc (100 mL), sequentially washed with water (100 mL) and a saturated NaCl solution (100 mL), dried (MgSO4) and concentrated under reduced pressure. The solid residue was triturated with a Et2O/hexane solution to afford the desired product (6.1 g): TLC (25% EtOAc/75% hexane) R 0.49; 1H-NMR (CDC13) δ 7.35-7.47 (m, 3H), 7.58- 7.63 (m, 3H), 7.90 (d, J=6.9 Hz, 2H), 8.19 (d, J=9.0 Hz, 2H).
Figure imgf000036_0002
Step 2. 4-(2-(4-Phenyl)thiazolyl)thioamline: 4-(2-(4-Phenyl)thiazolyl)thio-l-nitro- benzene was reduced in a manner analagous to that used in the preparation of 3-
(trifluoromethyl)-4-(4-pyridinylthio)aniline: TLC (25% EtOAc/75% hexane) R 0.18; 1H- NMR (CDCI3) δ 3.89 (br s, 2H), 6.72-6.77 (m, 2H), 1.26-1.53 (^, 611), 7.85-7.89 (m, 2H).
A3d. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000036_0003
Step 1. 4-(6-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 5-hydroxy-2- methylpyridine (5.0 g, 45.8 mmol) and l-fluoro-4-nitrobenzene (6.5 g, 45.8 mmol) in anh DMF (50 mL) was added K2CO3 (13.0 g, 91.6 mmol) in one portion. The mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The resulting mixture was poured into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined organics were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO4), and concentrated in vacuo to afford the desired product (8.7 g, 83%). This material was carried to the next step without further purification.
Figure imgf000037_0001
Step 2. 4-(6-Methyl-3-pyridinyloxy)aniline: A solution of 4-(6-methyl-3- pyridinyloxy)- 1 -nitrobenzene (4.0 g, 17.3 mmol) in EtOAc (150 mL) was added to 10%> Pd C (0.500 g, 0.47 mmol) and the resulting mixture was placed under a H2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite® and concentrated in vacuo to afford the desired product as a tan solid (3.2 g, 92%): EI-MS m/z 200 (M+).
A3e. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000037_0002
Step 1. 4-(3,4-Dimethoxyphenoxy)-l-nitrobenzene: To a solution of 3,4- dimethoxyphenol (1.0 g, 6.4 mmol) and l-fluoro-4-nitrobenzene (700 μL, 6.4 mmol) in anh DMF (20 mL) was added K2CO3 (1.8 g, 12.9 mmol) in one portion. The mixture was heated at the reflux temp with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (100 mL) and extracted with EtOAc (3 x 100 mL). The combined organics were sequentially washed with water (3 x 50 mL) and a saturated NaCl solution (2 x 50 mL), dried (Na2SO4), and concentrated in vacuo to afford the desired product (0.8 g, 54%). The cmde product was carried to the next step without further purification.
Figure imgf000038_0001
Step 2. 4-(3,4-Dimethoxyphenoxy)aniline: A solution of 4-(3,4-dimethoxy-phenoxy)-l- nitrobenzene (0.8 g, 3.2 mmol) in EtOAc (50 mL) was added to 10% Pd/C (0.100 g) and the resulting mixture was placed under a H2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite® and concentrated in vacuo to afford the desired product as a white solid (0.6 g, 75%): EI-MS m/z 245 (W ).
A3f. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Step 1. 3-(3-Pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxypyridine (2.8 g, 29.0 mmol), l-bromo-3-nitrobenzene (5.9 g, 29.0 mmol) and copper(I) bromide (5.0 g, 34.8 mmol) in anh DMF (50 mL) was added K2CO3 (8.0 g, 58.1 mmol) in one portion. The resulting mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined organics were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO4), and concentrated in vacuo. The resulting oil was purified by flash chromatography (30% EtOAc/70% hexane) to afford the desired product (2.0 g, 32 %). . This material was used in the next step without further purification.
Figure imgf000038_0003
Step 2. 3-(3-Pyridinyloxy)aniline: A solution of 3-(3-pyridinyloxy)-l-nitrobenzene (2.0 g, 9.2 mmol) in EtOAc (100 mL) was added to 10% Pd/C (0.200 g) and the resulting mixture was placed under a H2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite® and concentrated in vacuo to afford the desired product as a red oil (1.6 g, 94%): EI-MS m/z 186 (M+). A3g. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000039_0001
Step 1. 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: To a solution of 3-hydroxy-5- methylpyridine (5.0 g, 45.8 mmol), l-bromo-3 -nitrobenzene (12.0 g, 59.6 mmol) and coρper(I) iodide (10.0 g, 73.3 mmol) in anh DMF (50 mL) was added K2CO3 (13.0 g, 91.6 mmol) in one portion. The mixture was heated at the reflux temp, with stirring for 18 h and then allowed to cool to room temp. The mixture was then poured into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined organics were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO4), and- concentrated in vacuo . The resulting oil was purified by flash chromatography (30% EtOAc/70% hexane) to afford the desired product (1.2 g, 13%).
Figure imgf000039_0002
Step 2. 3-(5-Methyl-3-pyridinyloxy)-l-nitrobenzene: A solution of 3-(5-methyl-3- pyridinyloxy)-l -nitrobenzene (1.2 g, 5.2 mmol) in EtOAc (50 mL) was added to 10% Pd/C (0.100 g) and the resulting mixture was placed under a H2 atmosphere (balloon) and was allowed to stir for 18 h at room temp. The mixture was then filtered through a pad of Celite® and concentrated in vacuo to afford the desired product as a red oil (0.9 g, 86%): CI-MS m/z 201 ((M+H)+).
A3h. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000039_0003
Step 1. 5-Nitro-2-(4-methylphenoxy)pyridine: To a solution of 2-chloro-5- nitropyridine (6.34 g, 40 mmol) in DMF (200 mL) were added of 4-methylphenol (5.4 g, 50 mmol, 1.25 equiv) and K2CO3 (8.28 g, 60 mmol, 1.5 equiv). The mixture was stirred overnight at room temp. The resulting mixture was treated with water (600 mL) to generate a precipitate. This mixture was stirred for 1 h, and the solids were separated and sequentially washed with a 1 N NaOH solution (25 mL), water (25 mL) and pet ether (25 mL) to give the desired product (7.05 g, 76%): mp 80-82 °C; TLC (30% EtOAc/70% pet ether) R 0.79; 1H-NMR (DMSO-d6) δ 2.31 (s, 3H), 7.08 (d, J=8.46 Hz, 2H), 7.19 (d, J=9.20 Hz, IH), 7.24 (d, J=8.09 Hz, 2H), 8.58 (dd, J=2.94, 8.82 Hz, IH), 8.99 (d, J=2.95 Hz, IH); FAB-MS m/z (rel abundance) 231 ((M+H)+), 100%).
Figure imgf000040_0001
Step 2. 5-Amino-2-(4-methylphenoxy)pyridine Dihydrochloride: A solution 5-nitro- 2-(4-methylphenoxy)pyridine (6.94 g, 30 mmol, 1 eq) and EtOH (10 mL) in EtOAc (190 mL) was purged with argon then treated with 10% Pd/C (0.60 g). The reaction mixture was then placed under a H2 atmosphere and was vigorously stirred for 2.5 h. The reaction mixture was filtered through a pad of Celite®. A solution of HCI in Et2O was added to the filtrate was added dropwise. The resulting precipitate was separated and washed with EtOAc to give the desired product (7.56 g, 92%): mp 208-210 °C (dec); TLC (50%
EtOAc/50% pet ether) R70.42; 1H-NMR (DMSO-d6) 2.25 (s, 3H), 6.98 (d, J=8.45 Hz, 2H), 7.04 (d, J=8.82 Hz, IH), 7.19 (d, J=8.09 Hz, 2H), 8.46 (dd, J=2.57, 8.46 Hz, IH), 8.63 (d, J=2.57 Hz, IH); EI-MS m/z (rel abundance) (M+, 100%).
A3i. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000040_0002
Step 1. 4-(3-Thienylthio)-l-nitrobenzene: To a solution of 4-nitrothiophenol (80%pure;
1.2 g, 6.1 mmol), 3 -bromo thiophene (1.0 g, 6.1 mmol) and copper(Il) oxide (0.5 g, 3.7 mmol) in anhydrous DMF (20 mL) was added KOH (0.3 g, 6.1 mmol), and the resulting mixture was heated at 130 °C with stirring for 42 h and then allowed to cool to room temp. The reaction mixture was then poured into a mixture of ice and a 6N HCI solution (200 mL) and the resulting aqueous mixture was extracted with EtOAc (3 x 100 mL). The combined organic layers were sequentially washed with a IM NaOH solution (2 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (MgSO ), and concentrated in vacuo . The residual oil was purified by MPLC (silica gel; gradient from 10%)
EtOAc/90% hexane to 5% EtOAc/95% hexane) to afford of the desired product (0.5 g, 34%). GC-MS m/z 237 (M*)-
Figure imgf000041_0001
Step 2. 4-(3-Thienylthio)aniline: 4-(3-Thienylthio)-l -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method Al .
A3j. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
Figure imgf000041_0002
4-(5-Pyrimininyloxy)aniline: 4-Aminophenol (1.0 g, 9.2 mmol) was dissolved in DMF (20 mL) then 5-bromopyrimidine (1.46 g, 9.2 mmol) and K2CO3 (1.9 g, 13.7 mmol) were added. The mixture was heated to 100 °C for 18 h and at 130 °C for 48 h at which GC- MS analysis indicated some remaining starting material. The reaction mixture was cooled to room temp, and diluted with water (50 mL). The resulting solution was extracted with EtOAc (100 mL). The organic layer was washed with a saturated NaCl solution (2 x 50 mL), dried (MgSO4), and concentrated in vacuo. The residual solids were purified by MPLC (50% EtOAc/50% hexanes) to give the desired amine (0.650 g, 38%).
A3k. General Method for Substituted Aniline Formation via Nitroarene Formation Through Nucleophilic Aromatic Substitution, Followed by Reduction
// \ -OMe
N Step 1. 5-Bromo-2-methoxypyridine: A mixture of 2,5-dibromopyridine (5.5 g, 23.2 mmol) and NaOMe (3.76g, 69.6 mmol) in MeOH (60 mL) was heated at 70 °C in a sealed reaction vessel for 42 h, then allowed to cool to room temp. The reaction mixture was treated with water (50 mL) and extracted with EtOAc (2 x 100 mL). The combined organic layers were dried (Na2SO4) and concentrated under reduced pressure to give a pale yellow, volatile oil (4.1g, 95% yield): TLC (10% EtOAc / 90% hexane) R 0.57.
-OMe
^=N Step 2. 5-Hydroxy-2~methoxypyridine: To a stirred solution of 5-bromo-2- methoxypyridine (8.9 g, 47.9 mmol) in THF (175 mL) at -78 °C was added an n- butyllithium solution (2.5 M in hexane; 28.7 mL, 71.8 mmol)' dropwise and the resulting mixture was allowed to stir at -78 °C for 45 min. Trimethyl borate (7.06 mL, 62.2 mmol) was added via syringe and the resulting mixture was stirred for an additional 2 h. The bright orange reaction mixture was warmed to 0 °C and was treated with a mixture of a 3 N NaOH solution (25 mL, 71.77 mmol) and a hydrogen peroxide solution (30%; approx. 50 mL). The resulting yellow and slightly turbid reaction mixture was warmed to room temp, for 30 min and then heated to the reflux temp, for 1 h. The reaction mixture was then allowed to cool to room temp. The aqueous layer was neutralized with a IN HCI solution then extracted with Et2O (2 x 100 mL). The combined organic layers were dried (Na2SO4) and concentrated under reduced pressure to give a viscous yellow oil (3.5g, 60%).
Figure imgf000042_0001
Step 3. 4-(5-(2-Methoxy)pyridyl)oxy-l-nitrobenzene: To a stirred slurry of NaH (97%, 1.0 g, 42 mmol) in anh DMF (100 mL) was added a solution of 5-hydroxy-2- methoxypyridine (3.5g, 28 mmol) in DMF (100 mL). The resulting mixture was allowed to stir at room temp, for 1 h, 4-fluoronitrobenzene (3 mL, 28 mmol) was added via syringe. The reaction mixture was heated to 95 °C overnight, then treated with water (25 mL) and extracted with EtOAc (2 x 75 mL). The organic layer was dried (MgSO4) and concentrated under reduced pressure. The residual brown oil was crystalized EtOAc/hexane) to afford yellow crystals (5.23 g,-75%).
Figure imgf000043_0001
Step 4. 4-(5-(2-Methoxy)pyridyl)oxyaniline: 4-(5-(2-Methoxy)pyridyl)oxy-l- nitrobenzene was reduced to the aniline in a manner analogous to that described in Method A3d, Step2.
A4a. General Method for Substituted Aniline Synthesis via Nucleophilic Aromatic Substitution using a Halopyridine
H2N-^^S^ 3-(4-Pyridinylthio)aniline: To a solution of 3-aminothiophenol (3.8 mL, 34 mmoles) in anh DMF (90mL) was added 4-chloropyridine hydrochloride (5.4 g, 35.6 mmoles) followed by K2CO3 (16.7 g, 121 mmoles). The reaction mixture was stirred at room temp, for 1.5 h, then diluted with EtOAc (100 mL) and water (lOOmL). The aqueous layer was back-extracted with EtOAc (2 x 100 mL). The combined organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO4), and concentrated under reduced pressure. The residue was filtered through a pad of silica (gradient from 50%o EtOAc/50%) hexane to 70%> EtO Ac/30% hexane) and the resulting material was triturated with a Et2O/hexane solution to afford the desired product (4.6 g, 66%): TLC (100 % ethyl acetate) R 0.29; 1H-NMR (DMSO-d6) δ 5.41 (s, 2H), 6.64-6.74 (m, 3H), 7.01 (d, J=4.8, 2H), 7.14 (t, J=7.8 Hz, IH), 8.32 (d, J=4.8, 2H).
A4b. General Method for Substituted Aniline Synthesis via Nucleophilic Aromatic Substitution using a Halopyridine
4-(2-MethyI-4-pyridinyloxy)ani jline: Tro a soluxtionx of 4-aminophenol (3.6 g, 32.8 mmol) and 4-chloropicoline (5.0 g, 39.3 mmol) in anh DMPU (50 mL) was added potassium tert- butoxide (7.4 g, 65.6 mmol) in one portion. The reaction mixture was heated at 100 °C with stirring for 18 h, then was allowed to cool to room temp. The resulting mixture was poured into water (200 mL) and extracted with EtOAc (3 x 150 mL). The combined extracts were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO4), and concentrated in vacuo. The resulting oil was purified by flash chromatography (50 % EtOAc/50% hexane) to afford the desired product as a yellow oil (0.7 g, 9%): CI-MS m/z 201 ((M+H)+).
A4c. General Method for Substituted Aniline Synthesis via Nucleophilic Aromatic Substitution using a Halopyridine
Figure imgf000044_0001
Step 1. MethyI(4-nitrophenyl)-4-pyridylamine: To a suspension of N-methyl-4- nitroaniline (2.0 g, 13.2 mmol) and K2CO3 (7.2 g, 52.2 mmol) in DMPU (30mL) was added 4-chloropyridine hydrochloride (2.36 g, 15.77 mmol). The reaction mixture was heated at 90 °C for 20 h, then cooled to room temperature. The resulting mixture was diluted with water (100 mL) and extracted with EtOAc (100 mL). The organic layer was washed with water (100 mL), dried (Νa2SO ) and concentrated under reduced pressure. The residue was purified by column chromatography (silica gel, gradient from 80%> EtOAc /20% hexanes to 100% EtOAc) to afford methyl(4-nitrophenyl)-4-pyridylamine (0.42 g)
Figure imgf000044_0002
Step 2. Methyl(4-aminophenyl)-4-pyridylamine: Methyl(4-nitrophenyl)-4- pyridylamine was reduced in a manner analogous to that described in Method Al.
A5. General Method of Substituted Aniline Synthesis via Phenol Alkylation Followed by Reduction of a Nitroarene
Figure imgf000045_0001
Step 1. 4-(4-Butoxyphenyl)thio-l-nitrobenzene: To a solution of 4-(4-nitroρhenyl- thio)phenol (1.50 g, 6.07 mmol) in anh DMF (75 ml) at 0 °C was added NaH (60% in mineral oil, 0.267 g, 6.67 mmol). The brown suspension was stirred at 0 °C until gas evolution stopped (15 min), then a solution of iodobutane (1.12 g, .690 ml, 6.07 mmol) in anh DMF (20 mL) was added dropwise over 15 min at 0 °C. The reaction was stirred at room temp, for 18 h at which time TLC indicated the presence of unreacted phenol, and additional iodobutane (56 mg, 0.035 mL, 0.303 mmol, 0.05 equiv) and NaH (13 mg, 0.334 mmol) were added. The reaction was stirred an additional 6 h at room temp., then was quenched by the addition of water (400 mL). The resulting mixture was extracted with Et2O (2 x 500 mL). The combined organics were washed with water (2 x 400 mL), dried (MgSO4), and concentrated under reduced pressure to give a clear yellow oil, which was purified by silica gel chromatography (gradient from 20%> EtO Ac/80% hexane to 50% EtOAc/50% hexane) to give the product as a yellow solid (1.24 g, 67%): TLC (20% EtOAc/80% hexane) R 0.75; 1H-NMR (DMSO-d6) δ 0.92 (t, J= 7.5 Hz, 3H), 1.42 (app hex, J=7.5 Hz, 2H), 1.70 (m, 2H), 4.01 (t, J= 6.6 Hz, 2H), 7.08 (d, J=8.7 Hz, 2H), 7.17 (d, J=9 Hz, 2H), 7.51 (d, J= 8.7 Hz, 2H), 8.09 (d, J= 9 Hz, 2H).
Figure imgf000045_0002
Step 2. 4-(4-Butoxyphenyl)thioaniline: 4-(4-Butoxyphenyl)thio-l -nitrobenzene was reduced to the aniline in a manner analagous to that used in the preparation of 3- (trifluoromethyl)-4-(4-pyridmylthio)aniline (Method A3b, Step 2): TLC (33% EtOAc/77% hexane) R-0.38.
A6. General Method for Synthesis of Substituted Anilines by the Acylation of Diaminoarenes
Figure imgf000045_0003
4-(4-tert-Butoxycarbamoylbenzyl)aniline: To a solution of 4,4'-methylenedianiline (3.00 g, 15.1 mmol) in anh THF (50 mL) at room temp was added a solution of di-tert- butyl dicarbonate (3.30 g, 15.1 mmol) in anh THF (10 mL). The reaction mixture was heated at the reflux temp, for 3 h, at which time TLC indicated the presence of unreacted methylenedianiline. Additional di-tert-butyl dicarbonate (0.664 g, 3.03 mmol, 0.02 equiv) was added and the reaction stirred at the reflux temp, for 16 h. The resulting mixture was diluted with Et2O (200 mL), sequentially washed with a saturated NaHCO3 solution (100 ml), water (100 mL) and a saturated NaCl solution (50 mL), dried (MgSO4), and concentrated under reduced pressure. The resulting white solid was purified by silica gel chromatography (gradient from 33% EtOAc/67% hexane to 50% EtOAc/50% hexane) to afford the desired. product as a white solid ( 2.09 g, 46%): TLC (50% EtOAc/50% hexane) R 0.45; 1H-NMR (DMSO-d6) δ 1.43 (s, 9H), 3.63 (s, 2H), 4.85 (br s, 2H), 6.44 (d, J=8.4 Hz, 2H), 6.80 (d, J=8.1 Hz, 2H), 7.00 (d, J=8.4 Hz, 2H), 7.28 (d, J=8.1 Hz, 2H), 9.18 (br s, 1H); FAB-MS m/z 298 (M+). .
A7. General Method for the Synthesis of Aryl Amines via Electrophilic Nitration Followed by Reduction
Figure imgf000046_0001
Step 1. 3-(4-Nitrobenzyl)pyridine: A solution of 3-benzylpyridine (4.0 g, 23.6 mmol) and 70% nitric acid (30 mL) was heated overnight at 50 °C. The resulting mixture was allowed to cool to room temp, then poured into ice water (350 mL). The aqueous mixture then made basic with a IN NaOH solution, then extracted with Et2O (4 x 100 mL). The combined extracts were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO ), and concentrated in vacuo. The residual oil was purified by MPLC (silica gel; 50 % EtOAc/50% hexane) then recrystallization (EtOAc/hexane) to afford the desired product (1.0 g, 22%): GC-MS m/z 214 (M+).
Figure imgf000047_0001
Step 2. 3-(4-Pyridinyl)methylaniline: 3-(4-Nitrobenzyl)pyridine was reduced to the aniline in a manner analogous to that described in Method Al .
A8. General Method for Synthesis of Aryl Amines via Substitution with Nitrobenzyl Halides Followed by Reduction
Figure imgf000047_0002
Step 1. 4-(l-Imidazolylmethyl)-l -nitrobenzene: To a solution of imidazole (0.5 g, 7.3 mmol) and 4-nitrobenzyl bromide (1.6 g, 7.3 mmol) in anh acetonitrile (30 mL) was added K2CO3 (1.0 g, 7.3 mmol). The resulting mixture was stirred at room temp, for 18 h and then poured into water (200 mL) and the resulting aqueous solution was extracted with EtOAc (3 x 50 mL). The combined organic layers were sequentially washed with water (3 x 50 mL) and a saturated NaCl solution (2 x 50 mL), dried (MgSO4), and concentrated in vacuo. The residual oil was purified by MPLC (silica gel; 25%> EtOAc/75% hexane) to afford the desired product (1.0 g, 91%): EI-MS m/z 203 (M+).
Figure imgf000047_0003
Step 2. 4-(l-Imidazolylmethyl)aniline: 4-(l-lmidazolylmethyl)-l -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method A2.
A9. Formation of Substituted Hydroxymethylanilines by Oxidation of Nitrobenzyl Compounds Followed by Reduction
Figure imgf000047_0004
Step 1. 4-(l-Hydroxy-l-(4-pyridyl)methyl-l -nitrobenzene: To a stirred solution of 3- (4-nitrobenzyl)pyridine (6.0 g, 28 mmol) in CH2C12 (90 mL) was added m-CPBA (5.80 g, 33.6 mmol) at 10 °C, and the mixture was stirred at room temp, overnight. The reaction mixture was successively washed with a 10%> NaHSO3 solution (50 mL), a saturated K2CO3 solution (50 mL) and a saturated NaCl solution (50 mL), dried (MgSO ) and concentrated under reduced pressure. The resulting yellow solid (2.68 g) was dissolved in anh acetic anhydride (30 mL) and heated at the reflux temperature overnight. The mixture was concentrated under reduced pressure. The residue was dissolved in MeOH (25 mL) and treated with a 20% aqueous NH3 solution (30 mL). The mixture was stirred at room temp, for 1 h, then was concentrated under reduced pressure. The residue was poured into a mixture of water (50 mL) and CH2CI2 (50 mL). The organic layer was dried (MgSO4), concentrated under reduced pressure, and purified by column chromatography (80%>
EtOAc/ 20% hexane) to afford the desired product as a white solid. (0.53 g, 8%): mp 110- 118 °C; TLC (80% EtOAc/20% hexane) R 0.12; FAB-MS m/z 367 ((M+H)+, 100%).
Figure imgf000048_0001
Step 2. 4-(l-Hydroxy-l-(4-pyridyl)methyIaniIine: 4-(l -Hydroxy- 1 -(4-pyridyl)-methyl- 1 -nitrobenzene was reduced to the aniline in a manner analogous to that described in Method A3d, Step2.
A10. Formation of 2-(N-methylcarbamoyι)pyridmes via the Menisci reaction
c,γ NH2
Step 1. 2-(N-methylcarbamoyl)-4-chloropyridine. (Caution: this is a highly hazardous, potentially explosive reaction.) To a solution of 4-chloropyridine (10.0 g) inN- methylformamide (250 mL) under argon at ambient temp was added cone. H2SO4 (3.55 mL) (exotherm). To this was added H2O2 (17 mL, 30%> wt in H2O) followed by FeSO4 '7H2O (0.55 g) to produce an exotherm. The reaction was stirred in the dark at ambient temp for lh then was heated slowly over 4 h at 45 °C. When bubbling subsided, the reaction was heated at 60 °C for 16 h. The resulting opaque brown solution was diluted with H2O (700 mL) followed by a 10% NaOH solution (250 mL). The resulting aqueous mixture was extracted with EtOAc (3 x 500 mL) and the organic layers were washed separately with a saturated NaCl solution (3 150 mL). The combined organics phases were dried (MgSO ) and filtered through a pad of silica gel eluting with EtOAc. The solvent was removed in vacuo and the brown residue was purified by silica gel chromatography (gradient from 50% EtOAc / 50%o hexane to 80% EtOAc / 20% hexane). The resulting yellow oil crystallized at 0 °C over 72 h to give 2-(N- methylcarbamoyl)-4-chloropyridine in yield (0.61 g, 5.3%): TLC (50% EtOAc/50% hexane) R 0.50; MS; 1H ΝMR (CDC13): d 8.44 (d, 1 H, J = 5.1 Hz, CHN), 8.21 (s, IH, CHCCO), 7.96 (b s, IH, NH), 7.43 (dd, IH, J = 2.4, 5.4 Hz, CICHCN), 3.04 (d, 3H, J = 5.1 Hz, methyl); CI-MS m/z 171 ((M+H)+).
Step lb. Synthesis of 4-chloropyridine-2-carbonyl chloride HCI salt via picolinic acid Anhydrous DMF (6.0 mL) was slowly added to SOCl2 (180 mL) between 40° and 50 °C. The solution was stirred in that temperature range for 10 min. then picolinic acid (60.0 g, 487 mmol) was added in portions over 30 min. The resulting solution was heated at 72 °C (vigorous SO2 evolution) for 16 h to generate a yellow solid precipitate. The resulting mixture was cooled to room temp., diluted with toluene (500 mL) and concentrated to 200 mL. The toluene addition/concentration process was repeated twice. The resulting nearly dry residue was filtered and the solids were washed with toluene (2 x 200 mL) and dried under high vacuum for 4 h to afford 4-chloropyridine-2-carbonyl chloride HCI salt as a yellow-orange solid (92.0 g, 89%).
Figure imgf000049_0001
Step 2. Synthesis of methyl 4-chIoropyridme-2-carboxyIate HCI salt
Anh DMF (10.0 mL) was slowly added to SOCl2 (300 mL) at 40-48 °C. The solution was stirred at that temp, range for 10 min., then picolinic acid (100 g, 812 mmol) was added over 30 min. The resulting solution was heated at 72 °C (vigorous SO2 evolution) for 16 h to generate a yellow solid. The resulting mixture was cooled to room temp., diluted with toluene (500 mL) and concentrated to 200 mL. The toluene addition/concentration process was repeated twice. The resulting nearly dry residue was filtered, and the solids were washed with toluene (50 mL) and dried under high vacuum for 4 hours to afford 4-chloropyridine-2-carbonyl chloride HCI salt as an off-white solid (27.2 g, 16%). This material was set aside.
The red filtrate was added to MeOH (200 mL) at a rate which kept the internal temperature below 55 °C. The contents were stirred at room temp, for 45 min., cooled to 5 °C and treated with Et2O (200 mL) dropwise. The resulting solids were filtered, washed with Et2O (200 mL) and dried under reduced pressure at 35 °C to provide methyl 4-chloropyridine-2-carboxylate HCI salt as a white solid (110 g, 65%): mp 108-112 °C; 1H-NMR (DMSO-dβ) δ 3.88 (s, 3H); 7.82 (dd, J=5.5, 2.2 Hz, IH); 8.08 (d, J=2.2 Hz, IH); 8.68 (d, J=5.5 Hz, lH); 10.68 (br s, IH); HPLC ES-MS m/z 172 ((M+H)+).
Figure imgf000050_0001
Step 3a. Synthesis of 4-chloro-iV-methyl-2-pyridmecarboxamide from methyl
4-chloropyridine-2-carboxylate
A suspension of methyl 4-chloropyridine-2-carboxylate HCI salt (89.0 g, 428 mmol) in MeOH (75 mL) at 0 °C was treated with a 2.0 M methylamine solution in THF .(1 L) at a rate which kept the internal temp, below 5 °C. The resulting mixture was stored at 3 °C for 5 h, then concentrated under reduced pressure. The resulting solids were suspended in EtOAc (1 L) and filtered. The filtrate was washed with a saturated NaCl solution (500 mL), dried (Na2SO4) and concentrated under reduced pressure to afford 4-chloro-N- methyl-2-pyridinecarboxamide as pale-yellow crystals (71.2 g, 97%o): mp 41-43 °C; !H- ΝMR (DMSO-d6) δ 2.81 (s, 3H), 7.74 (dd, J=5.1, 2.2 Hz, IH), 8.00 (d, J=2.2, IH), 8.61 (d, J=5.1 Hz, IH), 8.85 (br d, IH); CI-MS m/z 111 ((M+H)+).
Figure imgf000050_0002
Step 3b. Synthesis of 4-chIoro-N-methyl-2-pyridinecarboxamide from 4- chloropyridine-2-carbonyl chloride
4-Chloropyridine-2-carbonyl chloride HCI salt (7.0 g, 32.95 mmol) was added in portions to a mixture of a 2.0 M methylamine solution in THF (100 mL) and MeOH (20 mL) at 0 °C. The resulting mixture was stored at 3 °C for 4 h, then concentrated under reduced pressure. The resulting nearly dry solids were suspended in EtOAc (100 mL) and filtered. The filtrate was washed with a saturated NaCl solution (2 x 100 mL), dried (Na2SO ) and concentrated under reduced pressure to provide 4-chloro-N-methyl-2- pyridinecarboxamide' as a yellow, crystalline solid (4.95 g, 88%>): mp 37-40 °C.
Figure imgf000051_0001
Step 4. Synthesis of 4-(2-(iV-methylcarbamoyl)-4-pyridyloxy) aniline
A solution of 4-aminophenol (9.60 g, 88.0 mmol) in anh. DMF (150 mL) was treated with potassium tert-butoxide (10.29 g, 91.7 mmol), and the reddish-brown mixture was stirred at room temp, for 2 h. The contents were treated with 4-chloro-N-methyl-2- pyridinecarboxamide (15.0 g, 87.9 mmol) and K2CO3 (6.50 g, 47.0 mmol) and then heated at 80 °C for 8 h. The mixture was cooled to room temp, and separated between EtOAc (500 mL) and a saturated NaCl solution (500 mL). The aqueous phase was back- extracted with EtOAc (300 mL). The combined organic layers were washed with a saturated NaCl solution (4 x 1000 mL), dried (Na2SO4) and concentrated under reduced pressure. The resulting solids were dried under reduced pressure at 35 °C for 3 h to afford 4-(2-(N-methylcarbamoyl)-4-pyridyloxy)aniline as a light-brown solid 17.9 g, 84%): 1H-ΝMR (DMSO-d6) δ 2.77 (d, J=4.8 Hz, 3H), 5.17 (br s, 2H), 6.64, 6.86 (AA'BB' quartet, J=8.4 Hz, 4H), 7.06 (dd, J=5.5, 2.5 Hz, IH), 7.33 (d, J=2.5 Hz, IH), 8.44 (d, J=5.5 Hz, IH), 8.73 (br d, IH); HPLC ES-MS m/z 244 ((M+H)+).
All. General Method for the Synthesis of 5-(4-Aminophenoxy)isoindoline-
1,3-dione
Figure imgf000052_0001
Step 1. Synthesis of 5-hydroxyisoindoline-l,3-dione
To a mixture of ammonium carbonate (5.28 g, 54.9 mmol) in cone. AcOH (25 mL) was slowly added 4-hydroxyphthalic acid (5.0 g, 27.45 mmol). The resulting mixture was heated at 120 °C for 45 min., then the clear, bright yellow mixture was heated at 160 °C for 2 h. The resulting mixture was maintained at 160 °C and was concentrated to approximately 15 mL, then was cooled to room temp, and adjusted pH 10 with a IN NaOH solution. This mixture was cooled to 0 °C and slowly acidified to pH 5 using a IN HCI solution. The resultant precipitate was collected by filtration and dried under reduced pressure to yield 5-hydroxyisoindoline-l,3-dione as a pale yellow powder as product (3.24 g, 72%): 1H NMR (DMSO-d6) δ 7.00-7.03 (m, 2H), 7.56 (d, J=9.3Hz, IH).
Figure imgf000052_0002
Step 2. Synthesis of 5-(4~nitrophenoxy)isoindoline-l,3-dione To a stirring slurry of NaH (1.1 g, 44.9 mmol) in DMF (40 mL) at 0 °C was added a solution of 5-hydroxyisoindoline-l,3-dione (3.2 g, 19.6 mmol) in DMF (40 mL) dropwise. The bright yellow-green mixture was allowed to return to room temp, and was stirred for 1 h, then l-fluoro-4-nitrobenzene (2.67 g, 18.7 mmol) was added via syringe in 3-4 portions. The resulting mixture was heated at 70 °C overnight, then cooled to room temp, and diluted slowly with water (150 mL), and extracted with EtOAc (2 x 100 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give 5-(4-nitrophenoxy)isoindoline-l,3-dione as a yellow solid (3.3 g, 62%): TLC (30% EtOAc/70% hexane) R/0.28; IH NMR (DMSO-d6) δ 7.32 (d, J=12 Hz, 2H), 7.52-7.57 (m, 2H), 7.89(d, J=7.8 Hz, IH), 8.29 (d, J=9 Hz, 2H), 11.43 (br s, IH); CI-MS m/z 285 ((M+H)+, 100%).
Figure imgf000053_0001
Step 3. Synthesis of 5-(4-aminophenoxy)isoindoline-l,3-dione
A solution of 5-(4-nitrophenoxy)isoindoline-l,3-dione (0.6 g, 2.11 mmol) in cone. AcOH (12 mL) and water (0.1 mL) was stirred under stream of argon while iron powder (0.59 g, 55.9 mmol) was added slowly. This mixture stirred at room temp, for 72 h, then was diluted with water (25 mL) and extracted with EtOAc (3 x 50 mL). The combined organic layers were dried (MgSO4) and concentrated under reduced pressure to give 5-(4- aminophenoxy)isoindoline-l,3-dione as a brownish solid (0.4 g, 75%): TLC (50% EtOAc/50% hexane) R 0.27; 1H NMR (DMSO-d6) δ 5.14 (br s, 2H), 6.62 (d, J=8.7 Hz, 2H), 6.84 (d, J=8.7 Hz, 2H), 7.03 (d, J=2.1 Hz, IH), 7.23 (dd, IH), 7.75 (d, J=8.4 Hz, IH), 11.02 (s, IH); HPLC ES-MS m/z 255 ((M+H)+, 100%).
A12. General Method for the Synthesis of δ-Sulfonylphenyl Anilines
Figure imgf000053_0002
Step 1. 4-(4-Methylsulfonylphenoxy)-l-nitrobenzene: To a solution of 4-(4- methylthiophenoxy)-l-ntirobenzene (2 g, 7.66 mmol) in CH2C12 (75 mL) at 0 °C was slowly added wCPBA (57-86%, 4 g), and the reaction mixture was stirred at room temperature for 5 h. The reaction mixture was treated with a 1 N NaOH solution (25 mL). The organic layer was sequentially washed with a IN NaOH solution (25 mL), water (25 mL) and a saturated NaCl solution (25 mL), dried (MgSO4), and concentrated under reduced pressure to give 4-(4-methylsulfonylphenoxy)-l -nitrobenzene as a solid (2.1 g).
Step 2. 4-(4-Methylsulfonylphenoxy)-l-aniline: 4-(4-Methylsulfonylphenoxy).-l- nitrobenzene was reduced to the aniline in a manner anaologous to that described in Method A3d, step 2.
A13. General Method for Synthesis of δ-Alkoxy-δ-carboxyphenyl Anilines
Figure imgf000054_0001
Step 1. 4-(3-Methoxycarbonyl-4-methoxyphenoxy)-l-nitrobenzene: To a solution of -(3-carboxy-4-hydroxyphenoxy)-l-nitrobenzene (prepared in a manner analogous to that described in Method A3 a, step 1, 12 mmol) in acetone (50 mL) was added K2CO3 (5 g) and dimethyl sulfate (3.5 mL). The resulting mixture was heated at the reflux temperature overnight, then cooled to room temperature and filtered through a pad of Celite®. The resulting solution was concentrated under reduced pressure, absorbed onto silica gel, and purified by column chromatography (50% EtOAc / 50% hexane) to give 4-(3- methoxycarbonyl-4-methoxyphenoxy)-l -nitrobenzene as a yellow powder (3 g): mp 115- 118 °C.
Figure imgf000054_0002
Step 2. 4-(3-Carboxy-4-rnethoxyphenoxy)-l-nitrobenzene: A mixture of 4-(3- methoxycarbonyl-4-methoxyphenoxy)-l -nitrobenzene (1.2 g), KOH (0.33 g),and water (5 mL) in MeOH (45 mL) was stirred at room temperature overnight and then heated at the reflux temperature for 4 h. The resulting mixture was cooled to room temperature and concentrated under reduced pressure. The residue was dissolved in water (50 mL), and the aqueous mixture was made acidic with a IN HCI solution. The resulting mixture was extracted with EtOAc (50 mL). The orgarucjavetwas dried (MgSO4) and concentrated under reduced pressure to give 4-(3-carboxy-4-methoxyphenoxy)-l -nitrobenzene (1.04 g).
Figure imgf000054_0003
Step 3. 4-(3-(N-Methylcarbamoly)-4-methoxyphenoxy)-l -nitrobenzene:
To a solution of 4-(3-carboxy-4-methoxyphenoxy)-l -nitrobenzene (0.50 g, 1.75 mmol) in CH2C12 (12 mL) was added SOCl2 (0.64 mL, 8.77 mmol) in portions. The resulting solution was heated at the reflux temp, for 18 h, cooled to room temp., and concentrated under reduced pressure. The resulting yellow solids were dissolved in CH2C12 (3 mL) then the resulting solution was treated with a methylamine solution (2.0 M in THF, 3.5 mL, 7.02 mmol) in portions (CAUTION: gas evolution), and stirred at room temp, for 4 h. The resulting mixture was treated with a IN NaOH solution, then extracted with CH2C12 (25 mL). The organic layer was dried (Na SO4) and concentrated under reduced pressure to give 4-(3-(N-methylcarbamoly)-4-methoxyphenoxy)-l-nitrobenzene as a yellow solid (0.50 g, 95%).
Figure imgf000055_0001
Step 4. 4-(3-(Y-Methylcarbamoly)-4-methoxyphenoxy)aniline:
A slurry of 4-(3-(N-methylcarbamoly)-4-methoxyphenoxy)-l-nitrobenzene (0.78 g, 2.60 mmol) and 10% Pd/C (0.20 g) in EtOH (55 mL) was stirred under 1 arm of H2 (balloon) for 2.5 d, then was filtered through a pad of Celite®. The resulting solution was concentrated under reduced pressure to afford 4-(3-(N-methylcarbamoly)-4- methoxyphenoxy)aniline as an off-white solid (0.68 g, 96%): TLC (O.P/o Et3Ν/99.9% EtOAc) Rf 0.36.
A14. General Method for the Synthesis of 4-(3-iV- Methylcarbamqylphenoyy)aniline...
Figure imgf000055_0002
Step 1. Synthesis of 4-(3-ethoxycarbonylphenoxy)-l -nitrobenzene
A mixture of 4-fluoro-l-nitrobenzene (16 mL, 150 mmol), ethyl 3-hydroxybenzoate 25 g, 150 mmol) and K2CO3 (41 g, 300 mmol) in DMF (125 mL) was heated at the reflux temp, overnight, cooled to room temp, and treated with water (250 mL). The resulting mixture was extracted with EtOAc (3 x 150 mL). The combined organic phases were sequentially washed with water (3 x 100 mL) and a saturated NaCl solution (2 x 100 mL), dried (Na2SO4) and concentrated under reduced pressure. The residue was purified by column chromatography (10% EtOAc/90%) hexane) to afford 4-(3- ethoxycarbonylphenoxy)-l -nitrobenzene as an oil (38 g).
Figure imgf000056_0001
Step 2. Synthesis of 4-(3-carboxyphenoxy)-l -nitrobenzene
To a vigorously stirred mixture of 4-(3-ethoxycarbonylphenoxy)-l -nitrobenzene (5.14 g, 17.9 mmol) in a 3:1 THF/water solution (75 mL) was added a solution LiOH«H2O (1.50 g, 35.8 mmol) in water (36 mL). The resulting mixture was heated at 50 °C overnight, then cooled to room temp., concentrated under reduced pressure, and adjusted to pH 2 with a IM HCI solution. The resulting bright yellow solids were removed by filtration and washed with hexane to give 4-(3-carboxyphenoxy)-l-nitrobenzene (4.40 g, 95%).
Figure imgf000056_0002
Step 3. Synthesis of 4-(3-(iV-methylcarbamoyl)phenoxy)-l-nitrobenzene
A mixture of 4-(3-carboxyphenoxy)-l -nitrobenzene (3.72 g, 14.4 mmol), EDCI'HCl (3.63 g, 18.6 mmol), N-methylmorpholine (1.6 mL, 14.5 mmol) and methylamine (2.0 M in THF; 8 mL, 16 mmol) in CH2CI2 (45 mL) was stirred at room temp, for 3 d, then concentrated under reduced pressure. The residue was dissolved in EtOAc (50 mL) and the resulting mixture was extracted. -with a IM HCI solution (50 mL). The aqueous layer was back-extracted with EtOAc (2 x 50 mL). The combined organic phases were washed with a saturated NaCl solution (50 mL), dried (Na2SO4), and concentrated under reduced pressure to give 4-(3-(N-methylcarbamoyl)ρhenoxy)-l -nitrobenzene as an oil (1.89 g).
Step 4. Synthesis of 4 A-(3-(N-methylcoarbam1oyl-)phenoxy)anilihe
A slurry of 4-(3-(N-methylcarbamoyl)phenoxy)-l -nitrobenzene (1.89 g, 6.95 mmol) and 5% Pd/C. (0.24 g) in EtOAc (20 L) was stirred under an H2 at (balloon) overnight. The resulting mixture was filtered through a pad of Celite® and concentrated under reduced pressure. The residue was purified by column chromatography (5% MeOH/95% CH2C12). The resulting oil solidified under vacuum overnight to give 4-(3-(N- methylcarbamoyl)phenoxy)aniline as a yellow solid (0.95 g, 56%>).
B. General Methods of Urea Formation
Bl. Reaction of a Heterocyclic Amine with an Aryl Isocyanate
Figure imgf000057_0001
N-(4-tert-butylpyridyl)-N,-(2,3-dichlorophenyl) urea: A solution of 2-amino-4-tert- butylpyridine (192 mg) and 2,3-dichlorophenyl isocyanate (240 mg) in anh. toluene (15 mL) was heated at 70 °C under argon for 24 h. The resulting mixture was diluted with EtOAc (200 mL) then washed with water (125 mL). The organic layer was dried (MgSO4) and concentrated under reduced pressure to give a gum. Trituration of the gum with hexanes afforded N-(4-tert-butylpyridyl)-N -(2,3-dichlorophenyl) urea as a white solid (394 mg, 91%>): TLC (2:1 hexanes/ethyl acetate) R 0.40; FAB-MS m/z 338 ((M+H)+).
B2a. Reaction of a Heterocyclic Amine with Λ^N'-Carbonyldiimidazole Followed by Reaction with a Substitμ. e.d Aniline
Figure imgf000057_0002
N-(4-tert-butylpyridyl)-N'-(4-(4-pyridinylmethyl)phenyl urea: To a stirring solution of
4-tert-butyl-2-aminopyridine (192 mg) in anh. CH2CI2 (15 mL) under argon at 0 °C was added CDI (207 mg). The resulting solution was allowed to warm to ambient temp over 2 h. To this mixture was added 4-(4-pyridylmethyl) aniline (prepared according to Method Al, 235 mg). The resulting solution was stirred at room temperature for 24 h, then was quenched with water (125 mL). The resulting mixture was extracted with EtOAc (200 mL). The organic layer was washed with water (100 mL), dried (MgSO ) and concentrated under reduced pressure. The residue was purified by chromatography (SiO2, EtOAc) to afford N-(4-tert-butylpyridyl)-N'-(4-(4-pyridinylmethyl)phenyl urea as a white solid (200 mg, 43%): TLC (EtOAc) R 0.47; FAB-MS m/z 361 ((M+H)+).
B2b. Reaction of a Heterocyclic Amine with NJV'-Carbonyldiimidazole Followed by Reaction with a Substituted Aniline
Figure imgf000058_0001
N^V,-(Bis(3-(2-methoxyquinolinyl)) urea): To a stirring solution of 3-amino-2- methoxyquinoline (138 mg) in anh CH2C12 (15 mL) under argon at 0 °C was added CDI (128 mg). The resulting solution was warmed to ambient temp over 1 h. After 16 h 4-(2- N-Methylcarbamyl-4-pyridyloxy)aniline (175 mg) was added and the resulting yellow solution was stirred at room temperature under argon for 72 h. The solution was treated with water (125 mL) and the resulting mixture was extracted with EtOAc (2 x 150 mL). The combined organics were washed with a saturated ΝaCl solution (100 mL), dried (MgSO4) and concentrated under reduced pressure. The residue was triturated with a 10%) hexane/90% EtOAc solution. The resulting white crystals were washed with EtOAc. The resulting filtrate was purified by chromatography (SiO2, 50% EtOAc/50%) hexane) to give N,N'-(bis(3-(2-methoxyqαmol:nyl)) urea) (30 mg, 20% yield): TLC (50% EtOAc/50% hexane) R 0.45; HPLC ES-MS m/z 375 (( +H)*).
B2c. Reaction of a Heterocyclic Amine with N,N'-Carbonyldimιidazole Followed by Reaction with a Substituted Aniline
Figure imgf000058_0002
N-(4-tert-Butylpyridyl)-N'-(4-(4-chlorophenoxy)phenyl) urea: A solution of 4-tert- butyl-2-aminopyridine (0.177 g, 1.18 mmol, 1 equiv.) in 1.2 mL of anh. CH2θ2 (1.2 mL) was added to CDI (0.200 g, 1.24 mmol, 1.05 equiv) and the mixture was allowed to stir under argon at room temperature 1 d. To the resulting solution was added 4-(4- chlorophenoxy)aniline (0.259 g, 1.18 mmol, 1 equiv.) in one portion. The resulting mixture was stirred at room temperature for 1 d, then was treated with a 10% citric acid solution (2 mL) and allowed to stir for 1 h. The resulting organic layer was extracted with EtOAc (3 x 5 mL). The combined organic layers were dried (MgSO ) and concentrated in vacuo. The resultant residue was treated with CH2C12 (10 mL) and a 1 N aqueous NaOH solution. This mixttire was allowed to stir overnight. The resulting organic layer was extracted with CH2C12 (3 x 5 mL). The combined organic layers were (MgSO4) and concentrated in vacuo. The resultant solids were suspended in diethyl ether (10 mL) and sonicated for 15 minutes. The resulting white solids were dried to give N-(4-tert- butylpyridyl)-N'-(4-(4-chlorophenoxy)phenyl) urea (42 mg, 9%): mp 198-199 °C.
B3. Reaction of Substituted Aniline with iV,iV'-Carbonyldiimidazole Followed by Reaction with a Heterocyclic Amine
Figure imgf000059_0001
N-(2-(5-trifluoromethyl)pyridyloxy)-iV-(3-(4-pyridylthio)phenyl) urea: A solution of 3-(4-pyridylthib)a'nι e 300 mg, 1.48 mmoles) in CH2C12 (12 mL) was treated with CDI (253 mg, 1.56 mmoles). The solution was stirred at room temperature and under argon for 2 h. The resulting mixture was treated with 2-amino-5-(trifluoromethyl)pyridine (238 mg, 1.47 mmoles) and heated at 40 °C overnight. The reaction mixture was then diluted with EtOAc (25 mL), washed with water (10 mL) and a saturated NaCl solution m(25 mL), dried (MgSO4), and concentrated under reduced pressure. The residue was purified by column chromatography (SiO2; gradient from 70% EtOAc/30%> CH2C12 to 100% EtOAc to give N-(2-(5-trifluoromethyl)pyridyloxy)-N'-(3-(4-pyridylthio)phenyl) urea afforded (103 mg): TLC (50% EtOAc/50% CH2C12) R/0.33; 1H-ΝMR (DMSO-d6) 6.06 (d, J=6Hz, 2H), 7.25 (dt, J=1.2,7.8 Hz, IH), 7.48 (t, J=8.1 Hz, IH), 7.59-7.63 (m, IH), 7.77 (d, J=8.7 Hz, IH), 7.86 (t, J=1.8 Hz, IH), 8.12 (dd, J=2.7,9.3 Hz, IH), 8.37 (d, J=6.3 Hz, 2H), 8.67 (bs, IH), 9.88 (s, IH), 10.26 (s, 1 H); FAB-MS m/z 391 ((M+H)+).
B4. Reaction of a Heterocyclic Amine with Phosgene, Followed by Reaction with a Substituted Aniline
Figure imgf000060_0001
iY-(3-(2-methoxyquinolinyl)-N'-(4-(4-(2-N-Methylcarbamyl-4-pyridyloxy)phenyl) urea: To a stirring solution of phosgene (20% in toluene, 1.38 mL) in anh. CH2C12 (20 ml) at 0 °C under argon was added anh. pyridine (207 mg) followed by 3-amino-2- methoxyquinoline (456 mg). The resulting solution was warmed to ambient temperature over 1 h, then concentrated in vacuo at ambient temperature to give a white solid. The solid was dried under vacuum for 15 min then suspended in anh toluene (20 mL). To the resulting slurry was added 4-(4-(2-(methylcarbamoyl)pyridyloxy)aniline (prepared according to Method A2, 300 mg) and the reaction heated under argon at 80 °C for 20 h. The resulting mixture was diluted with water (200 mL), then treated with a saturated NaHCO3 solution (10 mL) and extracted with EtOAc (2 x 300 mL). The combined organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO4) and concentrated under reduced pressure. The solid yellow residue was purified by chromatography (SiO2, gradient from 50% EtOAc/50% hexane to 100%o EtOAc), followed byϊec'rystailization from diethyl ether and hexane to give N-(3-(2- methoxyquinolinyl)-N'-(4-(4-(2-N-Methylcarbamyl-4-pyridyloxy)phenyl) urea as a white solid (140 mg, 25%): TLC (EtOAc) R/0.52; FAB-MS m/z 430 ((M+H)*).
B5a. Reaction of an Aniline with N,iV'-Carbonyl Diimidazole Followed by Addition of a Second Aniline.
Figure imgf000060_0002
Bis(4-(2-(N-methylcarbamoyl)-4-pyridyloxy)phenyl) Urea
To a stirring solution of 3-amino-2-methoxyquinoline (0.14 g) in anhydrous CH2C12 (15 mL) at 0 C was added CDI (0.13 g). The resulting solution was allowed to warm to room temp, over 1 h then was stirred at room temp, for 16 h. The resulting mixture was treated with 4-(2-(N-methylcarbamoyl)-4-pyridyloxy)aniline (0.18 g). The resulting yellow solution stirred at room temp, for 72 h, then was treated with water (125 mL). The resulting aqueous mixture was extracted with EtOAc (2 x 150 mL). The combined organic phases were washed with a saturated ΝaCl solution (100 ml), dried (MgSO4) and concentrated under reduced pressure. The residue was triturated (90%> EtO Ac/10% hexane). The resulting white solids were collected by filtration and washed with EtOAc to give bis(4-(2-(N-methylcarbamoyl)-4-pyridyloxy)phenyl) urea (0.081 g, 44%): TLC (100% EtOAc) R 0.50; 1H ΝMR (DMSO-d6) 2.76 (d, J=5.1 Hz, 6H), 7.1-7.6 (m, 12H), 8.48 (d, J=5.4 Hz, IH), 8.75 (d, J=4.8 Hz, 2H), 8.86 (s, 2H); HPLC ES-MS m/z 513 ((M+H)+).
B5b. Reaction of an Isocyanate with an Aniline.
Figure imgf000061_0001
N-(2-Methoxy-5-(trifluoromethyl)phenyl-Λr,-(4-(l,3-dioxoisoindolin-5-yloxy)phenyl)
. . . . ■- . . Urea . To a stirring solution of 2-methoxy-5-(trifluoromethyl)phenyl isocyanate (0.10 g, 0.47 mmol) in CH2CI2 (1.5 mL) was added 5-(4-aminophenoxy)isoindoline-l,3-dione (Method A3, Step 3; 0.12 g, 0.47 mmol) in one portion. The resulting mixture was stirred for 12 h, then was treated with CH2C12 (10 mL) and MeOH (5 mL). The resulting mixture was sequentially washed with a IN HCI solution (15 mL) and a saturated ΝaCl solution (15 L), dried (MgSO ) and concentrated under reduced pressure to afford N-(2-methoxy-5- (trifluoromethyl)phenyl-N'-(4-(l,3-dioxoisoindolin-5-yloxy)phenyl) urea as a white solid (0.2 g, 96%): TLC (70% EtOAc/30% hexane) R 0.50; 1H ΝMR (DMSO-d6) 3.95 (s, 3H), 7.31-7.10 (m, 6H), 7.57 (d, J=9.3Hz, 2H), 7.80 (d, J=8.7 Hz, IH), 8.53 (br s, 2H), 9.57 (s, IH), 11.27 (br s, IH); HPLC ES-MS 472.0 ((M+H)+, 100%).
B6. Reaction of an Aniline with Phosgene Followed by Addition of a Second Aniline.
Figure imgf000062_0001
N-(3-(2-methoxyquinolinyl)-iV,-(4-(4-(2-iV-Methylcarbamyl-4-pyridyloxy)phenyl) Urea
To a stirring solution of phosgene (20% in toluene, 1.38 mL) in anh. CH2CI2 (20 ml) at 0 °C under argon was added anh. pyridine (207 mg) followed by 3-amino-2- methoxyquinoline (456 mg). The resulting solution was warmed to ambient temperature over 1 h, then concentrated in vacuo at ambient temperature to give a white solid. The solid was dried under vacuum for 15 min then suspended in anh toluene (20 mL). To the resulting slurry was added 4-(4-(2-(methylcarbamoyl)pyridyloxy)aniline (prepared according to Method A2, 300 mg) and the reaction heated under argon at 80 °C for 20 h. The resulting mixture was diluted with water (200 mL), then treated with a saturated NaHCO3 solution (10 mL) and extracted with EtOAc (2 x 300 mL). The combined organic layers were washed with a saturated NaCl solution (100 mL), dried (MgSO4) and concentrated under reduced pressure. The solid yellow residue was purified by chromatography (SiO2, gradient from 50% EtOAc/50% hexane to 100% EtOAc), followed by recrystallization from diethyl ether and hexane to give N-(3-(2- methoxyquinolinyl)-N'-(4-(4-(2-N-Methylcarbamyl-4-pyridyloxy)phenyl) urea as a white solid (140 mg, 25%): TLC (EtOAc) R 0.52; FAB-MS m/z 430 ((M+H)+).
SPECIFIC COMPOUND PREPARATIONS
Descriptions of the detailed preparative steps used to prepare the specific compounds listed in Tables 1-8 are provided below. Many of the compounds listed in the Tables can be synthesized following a variety of methods. The specific examples below are therefore provided by way of illustration only and should not be constmed to limit the scope of the invention in any way.
Entry 1 : 4-tert-Butyl-2-aminopyridine was reacted with 4-tolyl isocyanate according to Method Bl to afford the urea.
' Entry 2: 4-tert-Butyl-2-aminopyridine was reacted with 4-fluorophenyl isocyanate according to Method Bl to afford the urea.
Entry 3: N-(4-tert-Butylpyridinyl)-N '-(2,3-dichlorophenyl) urea was prepared according to Method Bl.
Entry 4: 4-tert-Butyl-2-aminopyridine was reacted with 1 -naphthyl isocyanate according to Method B 1 to afford the urea.
Entry 5: N-(4-tert-Butylpyridyl)-N'-(4-(4-pyridinylmethyl)phenyl urea was prepared according to Method B2a.
Entry 6: 4-tert-Butyl-2-aminopyridine was reacted with 4-phenoxyaniline according to Method B2c to afford the urea.
Entry 7: 4-tert-Butyl-2-aminopyridine was reacted with 4-(4-methylphenoxy)aniline according to Method B2c to afford the urea.
Entry 8: N-(4-tert-Butylpyridyl)-N'-(4-(4-chlorophenoxy)phenyl) urea was prepared according to Method B2c.
Entry 9: 4-tert-Butyl-2-aminopyridine was reacted with 4-(4-methoxyphenoxy)aniline according to Method B2c to afford the urea. Entry 10: 4-(4-Ammophenoxy)pyridine was prepared starting from 4-hydroxypyridine and l-bromo-3-nitrobenzene according to Method A3F. 4-tert-Butyl-2-aminopyridine was reacted with 4-(4-aminophenoxy)pyridine according to Method B2a to afford the urea.
Entry 11 : 4-(4-Pyridylthio)aniline was prepared starting from 4-aminothiophenol and 4- chloropyridine hydrochloride according to Method A4a. 4-tert-Butyl-2-arninopyridine was reacted with 4-(4-pyridylthio)aniline according to Method B2c to afford the urea.
Entry 12: 4-(4-Pyridylthio)aniline was prepared starting from 4-aminothiophenol and 4- chloropyridine hydrochloride according to' Method A4a. 4-tert-Butyl-2-aminopyridine was reacted with 3-(4-pyridylthio)aniline according to Method B2c to afford the urea.
Entry 13: 2-Amino-5-(trifluoromethyl)pyridine and 4-(4-pyridylmethyl)aniline were reacted according to Method B3 to afford the urea.
Entry 14: N-(2-(5-Trifluoromethyl)pyridyloxy)-N'-(3-(4-pyridylthio)phenyl) urea was prepared according to Method B3.
Entry 15: 3-Aminoisoquinoline was reacted with 4-tolyl isocyanate according to Method Bl to afford the urea.
Entry 16: 3-Aminoisoquinoline was reacted with 4-fluorophenyl isocyanate according to Method Bl to afford the urea.
Entry 17: 3-Aminoisoquinoline was reacted with 2,3-dichlorophenyl isocyanate according to Method Bl to afford the urea.
Entry 18: 3-Aminoisoquinoline was reacted with 1 -naphthyl isocyanate according to Method B 1 to afford the urea. Entry 19: 3-Aminoisoquinoline was reacted with 4-(4-pyridylmethyl)aniline according to Method B2a to afford the urea.
Entry 20: 4-(4-Aminophenoxy)pyridine was prepared starting from 4-hydroxypyridine and l-bromo-3-nitrobenzene according to Method A3f. 3-Aminoisoquinoline was reacted with 4-(4-aminophenoxy)pyridine according to Method B2a to afford the urea.
Entry 21 : 3-Aminoquinoline and 4-(4-pyridylmethyl)aniline were reacted according to Method B3 to afford the urea.
Entry 22: N,N'-(Bis(3-(2-methoxyquinolinyl)) urea) was prepared according to Method B2b.
Entry 23: θ-Amino-2-methoxyquinoline and 4-(4-pyridylmethyl)aniline were reacted according to Method B3 to afford the urea.
Entry 24: 3-Amino-2-methoxyquinoline was reacted with 4-(4-pyridylcarbonyl)aniline according to Method B4 to afford the urea.
Entry 25: 4-(4-Pyridyloxy)aniline was prepared starting from 4-hydroxypyridine and 1- fluoro-4-nitrobenzene according to Method A3d. 3-Amino-2-methoxyquinoline was reacted with 4-(4-pyridyloxy)aniline accordmg to Method B2c to afford the urea.
Entry 26: 3-Amino-2-methoxyquinoline was reacted with 4-((4- methoxyphenyl)methylammo)aniline accordmg to Method B4 to afford the urea.
Entry 27: 3-(4-Pyridylthio)aniline was prepared according to Method A4a. 3-Amino-2- methoxyquinoline and 3-(4-pyridylmethyl)aniline were reacted according to Method B3 to afford the urea. Entry 28: 4-(4-Pyridyloxy)aniline was prepared starting from 4-hydroxypyridine and 1- fluoro-4-nitrobenzene according to Method A3d. l-(4-Methylpiperazinyι)-3- aminoisoquinoline was reacted with 4-(4-aminophenoxy)pyridine accordmg to Method
B2a to afford the urea.
Entry 104: 4-(4-(2-(N-Methylcarbamoyl)pyridyloxy)aniline was prepared according to
Method AlO. 3-Amino-2-methoxyquinoline was reacted with 4-(4-(2-(N- methylcarbamoyl)pyridyloxy)aniline according to Method B4 to afford the urea.
Entry 105: 4-(3-N-Methylcarbamoylρhenoxy)aniline was prepared according to Method A14. 3-Amino-2-methoxyquinoline was reacted with 4-(3-N- methylcarbamoylphenoxy)aniline according to Method B4 to afford the urea.
Entry 106: 4-Chloropyridine-2-carbonyl chloride was reacted with isopropylamine according to Method AlO, Step 3b. The resulting 4-chloro-N-isopropyl-2- pyridinecarboxamide was reacted with 4-aminophenol according to Method AlO, Step 4 to give 4-(2-(N-isoρropylcarbamoyl)-4-pyridyloxy)aniline. 3-Amino-2-methoxyquinoline was reacted with 4-(2-(N-isopropylcarbamoyl)-4-pyridyloxy)aniline according to Method B5b to afford the urea.
Entry 107: 4-Chloropyridme-2-carbonyl chloride HCI salt was reacted with ammonia according to Method AlO, Step 3b to form 4-chloro-2 -pyridinecarboxamide. 4-Chloro-2- pyridinecarboxamide was reacted with 4-aminophenol according to Method AlO, Step 4 using DMAC in place of DMF to give 4-(2-carbarnoyl-4-pyridyloxy)aniline. 4-(2- Carbamoyl-4-pyridyloxy)aniline was reacted with 4-(2-(N-isopropylcarbamoyl)-4- pyridyloxy)aniline according to Method B6 to afford the urea.
Entry 108: 4-Chloro-N-methyl-2 -pyridinecarboxamide was synthesized according to Method AlO, Step 3b. 4-Chloro-N-methyl-2 -pyridinecarboxamide was reacted with 4- aminophenol according to Method AlO, Step 4 using DMAC in place of DMF to give 4- (2-(N-methylcarbamoyl)-4-pyridyloxy)aniline. 3-Amino-2-methoxyquinoline was reacted with 4-(2-(N-methylcarbamoyl)-4-pyridyloxy)aniline according to Method B6 to afford the urea.
Entry 109: 4-Chloropyridine-2-carbonyl chloride HCI salt was reacted with ammonia according to Method AlO, Step 3b to form 4-chloro-2-pyridinecarboxamide. 4-Chloro-2- pyridinecarboxamide was reacted with 3 -aminophenol accordmg to Method AlO, Step 4 using DMAC in place of DMF to give 3-(2-carbamoyl-4-pyridyloxy)aniline. 3-Amino-2- methoxyquinoline was reacted with 3-(2-carbamoyl-4-pyridyloxy)anilme according to Method B6 to afford the urea.
Entryl lO: 4-Chloro-N-methyl-2 -pyridinecarboxamide, which was synthesized according to Method AlO, Step 3a, was reacted with 3-aminophenol according to Method AlO, Step 4 using DMAC in place of DMF to give 3-(-2-(N-methylcarbamoyl)-4- pyridyloxy)aniline. 3-Amino-2-methoxyquinoline was reacted with 3-(-2-(N- methylcarbamoyl)-4-pyridyloxy)aniline according to Method B6 to afford the urea.
Entry 111: 4-(4-(3-(N-Methylcarbamoyl)-2-methoxyphenoxy)aniline was prepared according to Method A13. 3-Amino-2-methoxyquinoline was reacted with 4-(4-(3-(N- Methylcarbamoyl)-2-methoxyphenoxy)aniline was according to Method B6 to afford the urea.
Entry 112: 5-(4-Aminophenoxy)isoindoline-l,3-dione was prepared according to Method Al l. 3-Amino-2-methoxyquinoline was reacted with 5-(4-Aminophenoxy)isoindoline- 1,3-dione was according to Method B5b to afford the urea.
The following compounds have been synthesized according to the General Methods listed above:
Table 1. 4-tert-Butyl-2-pyridyl Ureas
Figure imgf000068_0001
«
Figure imgf000068_0002
Figure imgf000069_0001
Table 2. 5-(Trifluoromethyl)-2-pyridyl Ureas
Figure imgf000070_0001
Figure imgf000070_0002
Table 3. 3-Isoquinolyl Ureas
Figure imgf000071_0001
Figure imgf000071_0002
Table 4. 3-Quinolyl Ureas
Figure imgf000072_0001
Figure imgf000072_0002
Table 5. 2-Methoxy-3-quinolyl Ureas
Figure imgf000073_0001
Figure imgf000073_0002
Table 6. 3-Quin.oIyI Ureas
Figure imgf000074_0001
Figure imgf000074_0004
Table 7. Additional Isoquinolyl Ureas
Figure imgf000074_0002
Table 8. 2-Methoxy-3-quinoIyl Ureas with Omega Carbonyls
Figure imgf000074_0003
Figure imgf000074_0005
Figure imgf000075_0001
BIOLOGICAL EXAMPLES P38 Kinase Assay:
The in vitro inhibitory properties of compounds were determined using a p38 kinase inhibition assay. P38 activity was detected using an in vitro kinase assay mn in
96-well microtiter plates. Recombinant human p38 (0.5 μg/mL) was mixed with substrate
(myelin basic protein, 5 μg/mL) in kinase buffer (25 mM Hepes, 20 mM MgCl2 and 150 mM NaCl) and' compound. One μCi well of 33P-labeled ATP (10 μM) was added to a final volume of 100 μL. The reaction was mn at 32 °C for 30 min. and stopped with a IM HCI solution. The amount of radioactivity incorporated into the substrate was determined by trapping the labeled substrate onto negatively charged glass fiber filter paper using a 1% phosphoric acid solution and read with a scintillation counter. Negative controls include substrate plus ATP alone.
All compounds exemplified displayed p38 IC50s of between 1 nM and 10 μM.
LPS Induced TNFα Production in Mice:
The in vivo inhibitory properties of selected compounds were determined using a murine LPS induced TNFα production in vivo model. BALB/c mice (Charles River Breeding Laboratories; Kingston, NY) in groups often were treated with either vehicle or compound by the route noted. After one hour, endotoxin (E. coli lipopolysaccharide (LPS) 100 μg) was administered intraperitoneally (i.p.). After 90 min, animals were euthanized by carbon dioxide asphyxiation and plasma was obtained from individual animals by cardiac puncture into heparinized tubes. The samples were clarified by centrifugation at 12,500 x g for 5 min at 4 °C. The supematants were decanted to new tubes, which were stored as needed at -20 °C. TNFα levels in sera were measured using • a commercial murine TNF ELISA kit (Genzyme).
The preceding examples can be repeated with similar success by substituting the generically or specifically described reactants and/or operating conditions of this invention for those used in the preceding examples.
From the foregoing discussion, one skilled in the art can easily ascertain the essential characteristics of this invention and, without departing from the spirit and scope thereof, can make various changes and modifications of the invention to adapt it to various usages and conditions.

Claims

WHAT IS CLAIMED IS:
1. A method of treating a disease mediated by p38 within a host, said method comprising administering to said host a compound of Formula I:
A - D - B (I)
or a pharmaceutically acceptable salt thereof, wherein
D is -NH-C(O)-NH-,
A is a substituted or unsubstituted pyridyl, quinolinyl or isoquinolinyl group, B is a substituted or unsubstituted, up to tricyclic aryl or heteroaryl moiety of up to 50 carbon atoms with a cyclic stmcture bound directly to D, containing, at least 5 cyclic members with 0-4 members of groups consisting of nitrogen, oxygen and' sulfur,
wherein the substituents for A are selected from the group consisting of halogen, up to per-halo, and Wn, where n is 0-3 and each is independently selected from the group consisting of
CMO alkyl, C O alkoxy, C3.10 cycloalkyl having at least a five cyclic members and 0-3 heteroatoms selected from N, S and O; C2.10 alkenyl, CMO alkenoyl, C6-C1 aryl,
C7-C2 alkaryl, C7-C 4 aralkyl, C3-Cι heteroaryl having at least 5 cyclic members and 1-3 heteroatoms selected from O, N and S, C -C24 alkheteroaryl having at least 5 cyclic
members and 1-3 heteroatoms selected from O, N and S;
substituted CMO alkyl, substituted CMO alkoxy, substituted C3-10 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from N, S and O; substituted C2.1o alkenyl, substituted C O alkenoyl, substituted C6-Cι aryl, substituted C7-C2 alkaryl, substituted C7-C 4 aralkyl, substituted C3-Cι2 heteroaryl having at least 5 members and 1-3 heteratoms selected from O, N and S, substituted C4-C24 alkheteroaryl having at least 5 members and 1-3 heteroatoms selected from O, N and S,
-CN, -CO2R7, -C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, -NR7R7', - NR7C(O)OR7', -NR7C(O)R7', with each R7 and R7' independently selected from hydrogen, CMO alkyl, CMO alkoxy, C2-10 alkenyl, CMO alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted CMO alkoxy, up to per halosubstituted C2-ιo alkenyl and up to per halosubstituted CMO alkenoyl, Cs-C^ cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from O, S and N, C6-Cι4 aryl, C3-C10 hetaryl having at least 6 cyclic members and 0-3 heteroatoms selected from O, S and N, up to per halo substituted C3-Cι0 cycloalkyl having at least 5 cyclic members and 0-3 heteroatoms selected from O, S and N, up to per halo substituted C6-Cι aryl and up to per halo substituted C3-C10 hetaryl having at least 6 cyclic members and 0-3 heteroatoms selected from O, S and N,
where W is a substituted group, it is substituted by halogen, up to per halo, or by one or more substituents independently selected from the group consisting of -CN, - CO2R7, -C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, -NR7R7', -NR7C(O)OR7', and -
7 7' 7 7*
NR C(O)R , wherein R and R are independently as defined above;
wherein the substituents for B are selected from the group consisting of halogen, up to per-halo, and Jn, where n is 0-3 and each J is independently selected from the group consisting of -CN, -CO2R7, -C(O)NR7R7', -C(O)-R7, -NO2, -OR7, -SR7, -NR7R7', - NR7C(O)OR7', -NR7C(O)R7', with each R7 and R7' independently as defined for W above, CMO alkyl, C O alkoxy, C3.10 cycloalkyl having at least five cyclic members and 0-3 heteroatoms, C2-10 alkenyl, CMO alkenoyl, C6.1 aryl, C3.12 hetaryl having at least a five cyclic members and 1-3 heteroatoms selected from N, S and O, C .24 aralkyl, C7.2 alkaryl, C4-C2 alkyheteroaryl having at least six members and 1-3 heteroatoms sleeted from O, N and S, substituted CMO alkyl, substituted CMO alkoxy, substituted C3-ιo cycloalkyl having at least a five-members and 0-3 heteroatoms selected from N, S and O, substituted C2-10 alkenyl, substituted CMO alkenoyl, substituted C6 - C1 aryl, substituted C3-12 hetaryl having at least five cyclic members and 1-3 heteroatoms selected from N, S and O, substituted C .2 alkaryl, substituted C -C24 aralkyl and substituted C4-C23 alkyheteroaryl having at least six members and 1-3 heteroatoms sleeted from O, N and S, and -Q-Ar, wherein Q is a single bond, -O-, -S-, -N(R7)-, -(CH2)m-, -C(O>, -CH(OH)-, - (CH2)mO-, -(CH2)mS-, -(CH2)mN(R7)-, -O(CH2)m- CHXa-, -CXa 2-, -S-(CH2)ra- and - N(R7)(CH2)m-, wherein m=l-3, andXa is halogen; and
Ar is a 5- or 6-member aromatic stmcture containing 0-2 members selected from the group consisting of nitrogen, oxygen and sulfur, which is optionally substituted by halogen, up to per-halo, and optionally substituted by Znl, wherein nl is 0 to 3 and each Z is independently selected from the group consisting of -CN, -CO2R7, -COR7, - C(O)NR7R7', -OR7, -SR7, -NO2, -NR7R7', -NR7C(O)R7', and -NR7C(O)OR7, with R7 and R7 as defined above for , CMO alkyl, CMO alkoxy, C2-ιo alkenyl and CMO alkenoyl, halo substituted CMO alkyl up to per halo, halo substituted CM0 alkoxy up to per halo, halosubstituted C2_ιo alkenyl up to per halo and halosubstituted CMO alkenoyl up to per halo, and where J is a substituted group, it is substituted by halogen, up to per halo, or by one or more substitutents independently selected from the group consisting of -CN, - CO2R7, -COR7, -C(O)NR7R7', -OR7, -SR7, -NO2, -NR7R7', -NR7C(O)R7', and - NR7C(O)OR7', with R7 and R7' as defined above for W.
2. A method of claim 1 wherein B of formula I is a) a substituted or unsubstituted bridged cyclic stmcture of up to 30 carbon atoms, b) a substituted or unsubstituted 6 member cyclic aryl moiety or a 5-6 member cyclic hetaryl moiety or e) a substituted or unsubstituted fused ring stmcture of from 2-3 fused aryl rings, • • hetaryl rings or both aryl and hetaryl rings.
3. A method as in claim 2 wherein B of formula I is a bridged cyclic stmcture of the formula -L-CML1)^ where L is a 5 or 6 membered cyclic stmcture bound directly to D, L1 comprises a substituted cyclic moiety having a least 5 members, M is a bridging group having at least one atom, q is an integer of from 1-3, and each cyclic stmcture of L and L1 contains 0-4 members of the group consisting of nitrogen, oxygen and sulfur, wherein L1 is substituted by at least one substituent selected from the group consisting of -SO2Ra, -SO2NRaR , -C(O)Ra, -C(O)NRaRb and -C(NRa)Rb , wherein Ra and R are independently hydrogen or a carbon based moiety.
4. A method of claim 3 wherein M in the formula
Figure imgf000080_0001
is selected from the group consisting of -O-, -S-, -N(R7)-, CH2)m-, -C(O)-, -CH(OH)-, -( CH2)mO-, .
-( CH2)mS-, -( CH2)m N(R7)-, -O(CH2)m-; -CHXa-, -CXa 2-, -S-(CH2)m-, -CRaRb-, and -N(R7)(CH2)m-, where m=l-3, Xa is halogen, q is 1, and Ra and Rb are as defined in claim 3, and R7 is selected from the group consisting of hydrogen, CMO alkyl, CMO alkoxy, C2. to alkenyl, CMO alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted CMO alkoxy, up to per halosubstituted C2.ιo alkenyl and up to per halosubstituted CMO alkenoyl.
5. A method of claim 4 wherein L in the formula
Figure imgf000080_0002
for B is a substituted 6 member cyclic aryl moiety, a substituted 5 or 6 member heterocyclic moiety, an unsubstituted 6 member cyclic aryl moiety, or an unsubstituted 5 or 6 member heterocyclic moiety, and L1 in the formula -L^ML1^ for B, is a substituted aryl moiety having at least 6 cyclic members, an unsubstituted aryl moiety having at least 6 cyclic members, a substituted hetaryl moiety having at least 6 cyclic members or an unsubstituted hetaryl moiety having at least 6 cyclic members, said heterocyclic and hetaryl moieties having 1 to 4 members selected from the group of hetero atoms consisting of nitrogen, oxygen and sulfur with the balance of the hetaryl and heterocyclic moiety being carbon. . . .
6. A method of claim 1 wherein B is phenyl, substituted phenyl, pyridinyl, substituted pyridinyl, pyrimidinyl, substituted pyrimidinyl, quinolinyl, substituted quinolinyl, isoquinolinyl, substituted isoquinolinyl or of the formula -L ML1^, wherein L1 and L in formula -L(MLl)q for B, are each independently selected from the group consisting of thiophene, substituted thiophene, phenyl, substituted phenyl, napthyl, substituted napthyl, pyridinyl, substituted pyridinyl, pyrimidinyl, substituted pyrimidinyl, quinolinyl substituted quinolinyl, isoquinolinyl and substituted isoquinolinyl.
7. A method of claim 6 wherein B is a substituted group, substituted by -CN, halogen up to per halo, CMO alkyl, CMO alkoxy,-OH, up to per halo substituted CMO alkyl, up to per halo substituted CMO alkoxy, -OR7, -SR7, -NR7R7' -CO2R7, - C(O)NR7R7', -C(O)R7 or -NO2, wherein each R7 and R7' are independently selected from hydrogen, CMO alkyl, CMO alkoxy, C2-ιo alkenyl, CMO alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted CMO alkoxy, up to per halosubstituted C2.ιo alkenyl and up to per halosubstituted CMO alkenoyl.
8. A compound of claim 6 wherein M in the formula -L-(MLl~) for B is -O-, - CH2-, -S-, -NH-, -C(O)-, -O-CH2-or -CH2-O-.
9. A method of claim 6, wherein A has 1-3 substituents selected from the group .consisting of CMO alkyl, up to per halo substituted CMO alkyl, -CN, -OH, halogen, C O alkoxy, up to per halo substituted CMO alkoxy and C3-10 heterocyclic moieties having at least 5 cyclic members and 1 to 2 heteroatoms selected from the group of consisting of nitrogen, oxygen and sulfur.
10. A method of claim 6 wherein L1 is substituted 1 to 3 times by one or more substituents selected from the group consisting of -CN, halogen up to per halo, CMO alkyl, CMO alkoxy,-OH, up to per halo substituted CMO alkyl, up to per halo substituted CMO alkoxy, -OR7, -SR7, -NR7R7' -CO2R7, -C(O)NR7R7', -C(O)R7 or -NO2, wherein each R7 and R7 is independently selected from hydrogen, CMO alkyl, CMO alkoxy, C2-10 alkenyl, CMO alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted Ci- 10 alkoxy, up to per halosubstituted C2-10 alkenyl and up to per halosubstituted CMO alkenoyl.
11. A method of claim 1 wherein a pharmaceutically acceptable salt of a compound of formula I is administered which is selected from the group consisting of a) basic salts of organic acids and inorganic acids selected from the group consisting of hydrochloric acid, hydrobromic acid, sulfuric acid, phosphoric acid, methanesulfonic acid, trifluorosulfonic acid, benzenesulfonic acid, p- toluene sulfonic acid (tosylate salt), 1-napthalene sulfonic acid, 2-napthalene sulfonic acid, acetic acid, trifluoroacetic acid, malic acid, tartaric acid, citric acid, lactic acid, oxalic acid, succinic acid, fumaric acid, maleic acid, benzoic acid, salicylic acid, phenylacetic acid, and mandelic acid; and b) acid salts of organic and inorganic bases containing cations selected from the group consisting of alkaline cations, alkaline earth cations, the ammonium cation, aliphatic substituted ammonium cations and aromatic substitτued ammonium cations.
12. A method as in claim 1 for the treatment of a disease other than cancer.
13. A method as in claim 1 wherein the condition within a host treated by administering a compound of formula I is rheumatoid arthritis, osteoarthritis, septic arthritis, tumor metastasis, periodontal disease, comeal ulceration, proteinuria, coronary thrombosis from atherosclerotic plaque, aneurysmal aortic, birth control, dystrophobic epidermolysis bullosa, degenerative cartilage loss following traumatic joint injury, osteopenias mediated by MMP activity, tempero mandibular joint disease or demyelating disease of the nervous system.
14. A method as in claim 1 wherein the condition within a host treated by administering a compound of formula I is rheumatic fever,, h ne resorption, postmenopausal osteoperosis, sepsis, gram negative sepsis, septic shock, endotoxic shock, toxic shock syndrome, systemic inflammatory response syndrome, inflammatory bowel disease (Crohn's disease and ulcerative colitis), Jarisch-Herxheimer reaction, asthma, adult respiratory distress syndrome, acute pulmonary fibrotic disease, pulmonary sarcoidosis, allergic respiratory disease, silicosis, coal worker's pneumoconiosis, alveolar injury, hepatic failure, liver disease during acute inflammation, severe alcoholic hepatitis, malaria (Plasmodium falcipamm malaria and cerebral malaria), non-insulin-dependent diabetes mellitus (NIDDM), congestive heart failure, damage following heart disease, atherosclerosis, Alzheimer's disease, acute encephalitis, brain injury, multiple sclerosis (demyelation and oligiodendrocyte loss in multiple sclerosis), advanced cancer, lymphoid malignancy, pancreatitis, impaired wound healing in infection, inflammation and cancer, myelodysplastic syndromes, systemic lupus erythematosus, biliary cirrhosis, bowel necrosis, psoriasis, radiation injury/ toxicity following administration of monoclonal antibodies, host-versus-graft reaction (ischemia reperfusion injury and allograft rejections of kidney, liver, heart, and skin), lung allograft rejection (obliterative bronchitis) or complications due to total hip replacement.
15. A method as in claim 1 wherein the condition within a host treated by administering a compound of formula I is an an infectious disease selected from the group consisting of tuberculosis, Helicobacter pylori infection during peptic ulcer disease, Chaga's disease resulting from Trypanosoma crazi infection, effects of Shiga- like toxin resulting from E. coli infection, effects of enterotoxin A resulting from Staphylococcus infection, meningococcal infection, and infections from Borrelia burgdorferi, Treponema pallidum, cytomegalovims, influenza vims, Theiler's encephalomyelitis vims, and the human immunodeficiency vims (HIN).
16. A method as in claim 3 wherein: Ra and R are, a) independently hydrogen, a carbon based moiety selected from the group consisting of Cι-Cι0 alkyl, C1-C1o alkoxy, C3-ιo cycloalkyl having 0-3 hetero atoms selected from Ν. S and O, C2-ιo alkenyl, CMO alkenoyl, C64 aryl, C3-12 hetaryl having 1-3 heteroatoms selected from O, Ν and S, C7-24 aralkyl, C7-C24 alkaryl, substituted CMO alkyl, substituted CMO alkoxy, substituted C3-10 cycloalkyl having 0-3 heteroatoms selected from Ν, S and O, substituted C6-ι aryl, substituted C3-12 hetaryl having 1-3 heteroatoms selected from Ν. S and O, substituted C . 24 aralkyl, substituted C .24 alkaryl, where Ra and R_ are a substituted group, they are substituted by halogen up to per halo, hydroxy, CMO alkyl, C3.12 cycloalkyl having 0-3 heteroatoms selected from O, S and Ν, C3-12 hetaryl having 1-3 heteroatoms selected from Ν, S and O, C O alkoxy, C6-i2 aryl, Cι-6 halo substituted alkyl up to per halo alkyl, C6-Ci2 halo substituted aryl up to per halo aryl, C3-C12 halo substituted cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C3- C12 hetaryl up to per halo heteraryl, halo substituted C -C24 aralkyl up to per halo aralkyl, halo substituted C7-C24 alkaryl up to per halo alkaryl, and -C(O)Rg; or
-OSi(Rf)3 where Rf is hydrogen, C O alkyl, CMO alkyl, CMO alkoxy, C3-C10 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C6-i2 aryl, C3- 2 hetaryl having 1-3 heteroatoms selected from O, S and N, C7.2 aralkyl, substituted CMO alkyl, substituted C1-C10 alkoxy, substituted C3-C12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, substituted C3-C12 heteraryl having 1-3 heteroatoms selected from O, S, and N, substituted Q5-12 aryl, and substituted C .24 alkaryl, where Rf is a substituted group it is substituted halogen up to per halo, hydroxy, CMO alkyl, C3-12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C3-12 hetaryl having 1-3 heteroatoms selected from N, S and O, CMO alkoxy, C6-i2 aryl, Cy.-C24 alkaryl, C7-C24 aralkyl, Cι_6 halo substituted alkyl up to per halo alkyl, G5- 2 halo substituted aryl up to per halo aryl, C3- Cπ halo substituted cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C3-Cι2 hetaryl up to per halo heteraryl, halo substituted C7-C aralkyl up to per halo aralkyl, halo substituted C -C2 alkaryl up to per halo alkaryl, and -C(O)Rg, or b) Ra and Rb together form a 5-7 member heterocyclic stmcture of 1-3 heteroatoms selected from N, S and O, or a substituted 5-7 member heterocyclic stmcture of 1-3 heteroatoms selected from N, S and O with substituents selected from the group consisting of halogen up to per halo, hydroxy, CMO alkyl,,, C3.ι,2 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C3-t2 hetaryl having 1-3 heteroatoms selected from N, S and O, C O alkoxy, C62 aryl, C7-C2 alkaryl, C7-C2 aralkyl, halo substituted Cι-6 alkyl up to per halo alkyl, halo substituted C6-Cι2 aryl up to per halo aryl, halo substituted C3-Cι2 cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C3-C12 hetaryl up to per halo heteraryl, halo substituted C-7-Cπ aralkyl up to per halo aralkyl, halo substituted C7-C24 alkaryl up to per halo alkaryl, and -C(O)R„, or c) one of Ra or Rb is -C(O)-, a C1-C5 divalent alkylene group or a substituted Cι-C5 divalent alkylene group bound to the moiety L to form a cyclic stmcture with at least 5 members, wherein the substituents of the substituted Cι-C5 divalent alkylene group are selected from the group consisting of halogen, hydroxy, CMO alkyl, C3-12 cycloalkyl having 0-3 heteroatoms selected from O, S and N, C32 hetaryl having 1-3 heteroatoms selected from N, S and O, CMO alkoxy, C6-i2 aryl, C7-C24 alkaryl, C -C24 aralkyl, Cι.6 halo substituted alkyl up to per halo alkyl, C6-Cι2 halo substituted aryl up to per halo aryl, C3- C12 halo substituted cycloalkyl having 0-3 heteroatoms selected from N, S and O, up to per halo cycloalkyl, halo substituted C3-C12 hetaryl up to per halo heteraryl, halo substituted C-7-C24 aralkyl up to per halo aralkyl, halo substituted C7-C24 alkaryl up to per halo alkaryl, and -C(O)Rg, where Rg is CMO alkyl; -CN, -CO2Rd, -ORd, -SRd, -NO2, -C(O) R_, -NR Re, -NRj C(O)ORe and -NRd C(O)Re, and R_ and e are independently selected from the group consisting of hydrogen, CMO, alkyl, CMO alkoxy, C3.10 cycloalkyl having 0-3 heteroatoms selected from O, N and S, C62 aryl, C3-C12 hetaryl with 1-3 heteroatoms selected from O, N and S and C -C24 aralkyl, C -C24 alkaryl, up to per halo substituted C1-C10 alkyl, up to per halo substituted C3-C10 cycloalkyl having 0-3 heteroatoms selected from O, N and S, up to per halo substituted C6-Cι4 aryl, up to per halo substituted C3-C12 hetaryl having 1-3 heteroatoms selected from O, N, and S, halo substituted C7-C 24 alkaryl up to per halo alkaryl, and up to per halo substituted C7-C24 aralkyl.
17. A method as in claim 4, wherein said substituted cyclic moiety L1 is phenyl, pyridyl or pyrimidinyl.
18. A method of claim 3 wherein L1 is substituted by -C(O)NRaR or - SO2NRaRb.
19. A method for the treatment of a disease mediated by p38 kinase other than cancer which comprises administering a compound selected from the group consisting of N-(2-Methoxy-3-quinolyl)-N'-(4-[3-(N-methylcarbamoyl)phenoxy]phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(4-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(4-(2-carbamoyl-4-pyridyloxy)phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(3-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)ur'ea
N-(2-Methoxy-3-quinolyl)-N'-(3-(2-carbamoyl)-4-pyridyloxy)phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(4-[3-(N-isopropylcarbamoyl)phenoxy]phenyl)urea
N-(2-Methoxy-3 -quinolyl)-N '-(4- [4-methoxy-3-(Ν- methylcarbamoyl)phenoxy]phenyl)urea
N-(3-Isoquinolyl)-N'-(4-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)urea and pharmaceutically acceptable salts thereof.
20. A compound of the following formula
A' - D - B' (I)
or a pharmaceutically acceptable salt thereof, wherein
D is -ΝH-C(O)-ΝH-,
A' is selected from the group consisting of substituted t-butylpyridinyl, unsubstituted t-butylpyridiyl, substituted (trifluoromethyl)pyridyl, imsubstituted (trifluoromethyl)pyridyl, substituted isopropylpyridyl, unsubstituted isopropylpyridyl, substituted (2-methyl-2-butyl)pyridyl, unsubstituted (2-methyl-2-butyl)pyridyl, substituted (3-ethyl-3-pentyl)pyridyl, unsubstituted (3-ethyl-3-pentyl)pyridyl, substituted isoquinolinyl, unsubstituted isoquinolinyl and unsubstituted quinolinyl,
B' is a) a substituted or unsubstituted aryl ring having 6 cyclic members,
b) a substituted or unsubstituted heterocyclic, ring having at least 5 cyclic members and 1-3 heteroatoms sleeted from O, S and N,
c) a substituted or imsubstituted fused ring stmcture of from 2-3 fused aryl rings, hetaryl rings or both aryl or hetaryl rings of up to 30 carbon atoms or
Figure imgf000087_0001
where A' is substituted or unsubsituted t-butylpyridyl (trifluoromethyl)pyridyl, isopropylpyridyl, (2-methyl-2-butyl)pyridyl or (3-ethyl-3-pentyl)pyridyl, or
Figure imgf000087_0002
where A' is substituted isoquinolinyl, imsubstituted isoquinolinyl or unsubstituted quinolinyl.
21. A pharmaceutical composition comprising a compound of claim 20 and a physiologically acceptable carrier.
22. A compound of claim 20, wherein A' has 1-3 substituents selected from the group consisting of CMO alkyl, up to per halo substituted CMO alkyl, -CN, -OH, halogen, C O alkoxy, up to per halo substituted CMO alkoxy and C3-ιo heterocyclic moieties having at least a five cyclic members and 1 to 2 heteroatoms selected from the group of consisting of nitrogen, oxygen and sulfur.
23. A compound of claim 20 wherein B' is a substituted group substituted by - CN, halogen, CMO alkyl, CMO alkoxy,-OH, up to per halo substituted CMO alkyl, up to per halo substituted CMO alkoxy -OR7, -SR7, -NR7R7', -NR7C(O)OR7', -NR7C(O)R7' or - NO2, wherein each R7 and R7 is independently selected from hydrogen, CMO alkyl, CMO alkoxy, C2-10 alkenyl, CMO alkenoyl, up to per halosubstituted CMO alkyl, up to per halosubstituted CMO alkoxy, up to per halosubstituted C2-10 alkenyl and up to per halosubstituted CMO alkenoyl.
24. A compound of claim 20 wherein B' is thiophene, substituted thiophene, substituted phenyl, substituted phenyl, pyridinyl, substituted pyridinyl, pyrimidinyl, substituted pyrimidinyl, quinolinyl, substituted quinolinyl, isoquinolinyl, substituted isoquinolinyl, napthyl or substituted napthyl.
25. A compoimd of claim 20 which is a pharmaceutically acceptable salt of a compound of formula I' selected from the group consisting of a) basic salts of organic acids and inorganic acids selected from the group consisting of hydrochloric acid, hydrobromic acid, sulfuric acid, phosphoric acid, methanesulfonic acid, trifluorosulfonic acid, benzenesulfonic acid, p- toluene sulfonic acid (tosylate salt), 1-napthalene sulfonic acid, 2-napthalene sulfonic acid, acetic acid, trifluoroacetic acid, malic acid, tartaric acid, citric acid, lactic acid, oxalic acid, succinic acid, fumaric acid, aleic acid, benzoic acid, salicylic acid, phenyiacetic acid, and mandelic acid; and b) acid salts of organic and inorganic bases containing cations selected from the group consistng of alkaline cations, alkaline earth cations, the ammonium cation, aliphatic substituted ammonium cations and aromatic substituted ammonium cations.
26. A compound selected from the group consisting of
N-(4-tert-butylpyridinyl)-N'-(4-methylphenyl) urea N-(4-tert-butylpyridinyl)-N'-(4-fluorophenyl) urea N-(4-tert-butylpyridinyl)-N' -(2,3 -dichlorophenyl) urea
N-(4-tert-butylp yridinyl)-N' -(1 -naphthyl) urea
N-(4-tert-butylpyridinyl)-N'-(4-)4-methoxyphenoxy)phenyl) urea
N-(2-)(5-trifluoromethyl)pyridmloxy-N'-(4-)4-pyridylmethyl)phenyl) urea
N-(2-)(5-trifluoromethyl)pyridinloxy-N'-(3-)4-pyridylthio)phenyl) urea
N-(3-isoquinolyl)-N'-(4-methylphenyl) urea
N-(3-isoquinolyl)-N'-(4-fluorophenyl) urea
N-(3 -isoquinolyl)-N' -(2 ,3 -dichlorophenyl) urea
N-(3-isoquinolyl)-N'-(l -naphthyl) urea
N-(3-isoquinolyl)-N'-(4-)4-pyridinylmethyl)phenyl) urea
N-(3-quinolyl)-N'-(4-)4-pyridinylmethyl)phenyl) urea
27. A method of treating a disease mediated by p38 within a host, said method comprising administering a compound of claim 20.
28. A pharmaceutical composition for the treatment of a disease within a host mediated by p38 comprising an amoimt of a compound of Formula I effective to inhibit p38 mediated events,
A - D - B (I)
or a pharmaceutically acceptable salt thereof, in an amount effective to treat a disease mediated by p38 and a physiologically acceptable carrier:
wherein
D is -NH-C(O)-NH-,
A is as defined in claim 1 B is as defined in claim 1
29. A pharmaceutical composition as in claim 28 wherein B of formula I is a) a substituted or unsubstituted bridged cyclic stmcture of up to 30 carbon atoms, b) a substituted or unsubstituted 6 member cyclic aryl moiety or a 5-6 member cyclic hetaryl moiety or c) a substituted or unsubstituted fused ring stmcture of from 2-3 fused aryl rings, hetaryl rings or both aryl and hetaryl rings.
30. A pharmaceutical composition as in claim 29 wherein B of formula I is a bridged cyclic structure of the formula -L-CML1^, where L is a 5 or 6 membered cyclic stmcture bound directrly to D, L comprises a substituted cyclic moiety having a least 5 members, M is a bridging group having at least one atom, q is an integer of from 1-3, and each cyclic stmcture of L and L contains 0-4 members of the group consisting of nitrogen, oxygen and sulfur, wherein L is substituted by at least one substituent selected from the group consisting of-SO2Rx, -C(O)Rx, and -C(NRy)Rz wherein Ry is hydrogen or a carbon based moiety of up to 24 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally halosubstituted, up to per halo,
Rz is hydrogen or a carbon based moiety of up to 30 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen, hydroxy and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected frcm N, S and O and are optionally substituted by halogen;
Rx is Rz or NRaRb where Ra and Rb are a) independently hydrogen, a carbon based moiety of up to 30 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen, hydroxy and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen, or
-OSi(Rf)3 where Rf is hydrogen or a carbon based moiety of up to 24 carbon atoms optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen, hydroxy and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen; or b) Ra and R together form a 5-7 member heterocyclic stmcture of 1 -3 heteroatoms selected from N, S and O, or a substituted 5-7 member heterocyclic stmcture of 1-3 heteroatoms selected from N, S and O substituted by halogen, hydroxy or carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen; or c) one of Ra or Rb is -C(O)-, a Cι-C5 divalent alkylene group or a substituted Cι-C5 divalent alkylene group bound to the moiety L to form a cyclic stmcture with at least 5 members, wherein the substituents of the substituted C1-C5 divalent alkylene group are selected from the group consisting of halogen, hydroxy, and carbon based substituents of up to 24 carbon atoms, which optionally contain heteroatoms selected from N, S and O and are optionally substituted by halogen.
31. A pharmaceutical composition as in claim 30 wherein the cyclic structures of B and L bound directly to D are not substituted in the ortho position by -OH or a moiety having an ionizable hydrogen and a pKa of 10 or less.
32. A pharmaceutical composition as in claim 28 wherein B of Formula I is a substituted or unsubstituted six member aryl moiety or at least a five member heterocylic moiety, said het'erocychV inoiety' having 1 to 4 members selected from the group of hetaryl atoms consisting of nitrogen, oxygen and sulphur with the balance of the heterocylic moiety being carbon.
33. A pharmaceutical composition as in claim 30 wherein B of Formula I is an unsubstituted phenyl group, an imsubstituted pyridyl group, an imsubstituted pyrimidinyl group, a phenyl group substittited by a substituent selected from the group consisting of halogen and Wn wherein W and n are as defined in claim 30, a pyrimidinyl group substituted by a substitutent selected from halogen and Wn, wherein W and n are as defined in Claim 30, or a pyridyl group substituted by a substituent selected from the group consisting of halogen and Wn wherein W and n are as defined in claim 30.
34. A pharmaceutical composition as in claim 30, wherein L, the 5 or 6 member cyclic stmcture bound directly to D, is a substituted or unsubstituted 6 member heteroaryl moiety, wherein said heteroaryl moiety has 1 to 4 members selected from the group of heteroatoms consisting of nitrogen, oxygen and sulphur with the balance of said hetaryl moiety being carbon, wherein the one or more substituents are selected from the group consisting of halogen and Wn, wherein W and n are as defined in claim 30.
35. A pharmaceutical composition as in claim 30, wherem L, the 5 or 6 member cyclic stmcture bound directly to D, is a substituted phenyl, substituted thiophene, unsubstituted thiophene, substituted napthyl, unsubstituted napthyl, unsubstituted phenyl, substituted pyridyl, unsubstituted pyridyl group, unsubstituted pryimidinyl or substituted prymidinyl.
36. A pharmaceutical composition as in claim 30, wherein said substituted cyclic moiety L1 is phenyl, pyridyl or pyrimidinyl and M is one or more bridging groups selected from the group consisting of -O-, -S-, -N(R7)-, -(CH2)m-, -C(O)-, -CH(OH)-, - . (CH2)mO-, -(CH2)mS-, -(CH2)rnN(R7)-, -O(CH2)m- CHX\ -CXa 2-, -S-(CH2)m- and - N(R7)(CH2)m-3 where m= 1-3, Xa is halogen and R7 is hydrogen or a carbon based moiety of up to 24 carbon atoms, optionally containing heteroatoms selected from N, S and O and optionally substituted by halogen up to per halo.
37. A pharmaceutical composition as in claim 30 wherein L1 is substituted by -C(O)Rx .
38. A phaπnaceutical composition as in claim 30 wherein L1 is substituted by -C(O)Rx or -SO2Rx, wherein Rx is NRaRb.
39. A pharmaceutical composition for the treatment of a disease within a host mediated by p38 comprising a compound selected from the group consisting of
N-(2-Methoxy-3-quinolyl)-N'-(4-[3-(N-methylcarbamoyl)phenoxy]phenyl)urea
N-(2-Metlιoxy-3-quinolyl)-N'-(4-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)urea N-(2-Methoxy-3-quinolyl)-N'-(4-(2-carbamoyl-4-pyridyloxy)phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(3-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(3-(2-carbamoyl)-4-pyridyloxy)phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(4-[3-(N-isopropylcarbamoyl)phenoxy]phenyl)urea
N-(2-Methoxy-3-quinolyl)-N'-(4-[4-methoxy-3-(Ν- methylcarbamoyl)phenoxy]phenyl)urea
N-(3-Isoqιιinolyl)-N!-(4-[2-(N-methylcarbamoyl)-4-pyridyloxy]phenyl)urea and pharmaceutically acceptable salts thereof.
PCT/US2002/012064 2001-04-20 2002-04-17 HETEROARYL UREAS CONTAINING NITROGEN HETERO-ATOMS AS p38 KINASE INHIBITORS WO2002085859A1 (en)

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EP02725709A EP1379507B1 (en) 2001-04-20 2002-04-17 HETEROARYL UREAS CONTAINING NITROGEN HETERO-ATOMS AS p38 KINASE INHIBITORS
CA2443952A CA2443952C (en) 2001-04-20 2002-04-17 Heteroaryl ureas containing nitrogen hetero-atoms as p38 kinase inhibitors
AT02725709T ATE520663T1 (en) 2001-04-20 2002-04-17 HETEROARYL-UREASES CONTAINING NITROGEN ATOMS AS INHIBITORS OF P38 KINASE
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