WO2002033078A1 - A novel-polypeptide, a proliferating cell antigen p120-51.59 and the polynucleotide encoding the polypeptide - Google Patents

A novel-polypeptide, a proliferating cell antigen p120-51.59 and the polynucleotide encoding the polypeptide Download PDF

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Publication number
WO2002033078A1
WO2002033078A1 PCT/CN2001/001430 CN0101430W WO0233078A1 WO 2002033078 A1 WO2002033078 A1 WO 2002033078A1 CN 0101430 W CN0101430 W CN 0101430W WO 0233078 A1 WO0233078 A1 WO 0233078A1
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polypeptide
polynucleotide
cell antigen
proliferating cell
sequence
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PCT/CN2001/001430
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French (fr)
Chinese (zh)
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Yumin Mao
Yi Xie
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Shanghai Biowindow Gene Development Inc.
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Priority to AU2002221432A priority Critical patent/AU2002221432A1/en
Publication of WO2002033078A1 publication Critical patent/WO2002033078A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a novel polypeptide, "germ cell antigen P120-51.59, and a polynucleotide sequence encoding the polypeptide. The invention also relates to the polynucleotide and the polypeptide Preparation method and application.Technical background
  • Proliferating cell nuclear antigen is a protein that participates in DNA replication by acting as a DNA polymerase delta cofactor. DM polymerase is responsible for lead strand DNA replication.
  • PCNA is also involved in nucleotide excision repair (Kuriyan et al. J Mol. Bio 234: 915-925 (1993)).
  • PCNA is a structure-specific endonuclease with three to five exonuclease activities that contact the antigen nucleic acid and is homologous to the endonucleotide repair factor.
  • the isolation of the new proliferating cell antigen P120-51.59 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states.
  • This protein may form the basis for developing diagnostic and / or therapeutic drugs for the disease, so isolating its coding for DM is very important.
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a proliferating cell antigen P120-51.59.
  • Another object of the present invention is to provide a method for producing a proliferating cell antigen P120-51.59.
  • Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors against the polypeptide of the present invention, the proliferating cell antigen P120-51.59.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of the proliferating cell antigen P120-51.59. Summary of invention
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • the present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of the proliferating cell antigen P120-51.59 protein, which comprises using the polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • Fig. 1 is a comparison diagram of the amino acid sequence homology of the proliferating cell antigen P120-51.59 and the proliferating cell antigen P120 of the present invention.
  • the upper sequence is the proliferating cell antigen P120-51.59
  • the lower sequence is the proliferating cell antigen P120.
  • Identical amino acids are represented by single-character amino acids between the two sequences, and similar amino acids are represented by "+".
  • Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated proliferating cell antigen P120-51.59. 51. 59kDa is the molecular weight of the protein. The arrow indicates the isolated protein band.
  • Nucleic acid sequence refers to oligonucleotides, nucleotides or polynucleotides and fragments or parts thereof, and may also refer to genomic or synthetic DNA or RM, which may be single-stranded or double-stranded, representing the sense strand or Antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide” or “protein” does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
  • a “variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it.
  • the changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence.
  • Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine.
  • Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • Insert refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • Replacement refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • An "agonist” refers to a molecule that, when combined with the proliferating cell antigen P120-51.59, can cause changes in the protein and thereby regulate the activity of the protein.
  • Agonists can include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to the proliferating cell antigen P120-51.59.
  • “Regulation” refers to a change in the function of the proliferating cell antigen P120-51.59, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological property, function, or immunity of the proliferating cell antigen P120-51.59. Change of nature.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Northern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that the two sequences bind to each other as a specific or selective interaction.
  • Percent identity refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences (Higg ins, DG and PM Sharp (1988) Gene 73: 237-244) in different ways according to method a Clus ter Clus ter method checks the distance between each of all pairs Group sequences are arranged in clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula:
  • Clus ter method or may be used as known in the art by: Fotun Hein Determination of percentage identity between nucleic acid sequences (Hein J., (1990) Methods in enzymology 183: 625-645) 0
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to a “sense strand.”
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa, F (ab,) 2 and Fv, which can specifically bind to the epitope of the proliferating cell antigen P120-51.59.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring).
  • a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system.
  • Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
  • isolated proliferating cell antigen P120-51.59 refers to proliferating cell antigen P120-51.59 that is substantially free of other proteins, lipids, sugars, or other substances with which it is naturally associated.
  • Those skilled in the art can purify proliferating cell antigen P120-51.59 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the proliferating cell antigen P120-51.59 polypeptide can be analyzed by amino acid sequence.
  • the invention provides a novel polypeptide-proliferating cell antigen? 120-51.59, which basically consists of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the present invention can be naturally purified products, or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude initial methionine residues.
  • the invention also includes fragments, derivatives and analogs of the proliferating cell antigen P120-51.59.
  • fragment refers to a polypeptide that substantially maintains the same biological function or activity of the proliferating cell antigen P120-51.59 of the present invention.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution Amino An acid may or may not be encoded by a genetic codon; or (II) such a type in which a group on one or more amino acid residues is substituted by another group to include a substituent; or ( ⁇ ⁇ ) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide ( Such as leader sequences or secreted sequences or sequences used to purify this polypeptide or protease sequences).
  • such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a full-length polynucleotide sequence of 2191 bases, and its open reading frame 400-1809 encodes 469 amino acids.
  • this polypeptide has 33% homology with the proliferating cell antigen P120, and it can be deduced that the proliferating cell antigen P120-51. 59 has similar structure and function to the proliferating cell antigen P120.
  • the polynucleotide of the present invention may be in the form of DNA or RNA.
  • DNA forms include cDM, genomic DNA, or synthetic DNA.
  • DNA can be single-stranded or double-stranded.
  • DNA can be coding or non-coding.
  • the coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the present invention also relates to a polynucleotide that hybridizes to a sequence described above 50% less, preferably 70% identity).
  • the invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions.
  • “strict conditions” means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add denaturants during hybridization, such as 50% (v / v) formamide, 0.1Vj, bovine serum / 0.1% Fi col l, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence encoding the proliferating cell antigen P120-51.59 of the present invention can be obtained by various methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DM sequence to obtain the double-stranded DNA of the polypeptide.
  • genomic DM is the least commonly used. Direct chemical synthesis of DM sequences is often the method of choice. The more commonly used method is the separation of cDM sequences.
  • the standard method for isolating the cDNA of interest is to isolate mRM from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library.
  • Various methods have been used to extract mRNA, and kits are also commercially available (Qiagene). It is also a common method to construct a CDM library (Sambrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spiring Harbor Laboratory. New York, 1989).
  • Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the appearance or loss of marker gene function; (3) determination of the level of transcripts of proliferating cell antigen P120 ⁇ ⁇ 51.59 (4) Detecting protein products expressed by genes through immunological techniques or measuring biological activity. The above methods can be used alone or in combination.
  • the probe used for hybridization is any part of the polynucleotide of the present invention Homologous, at least 10 nucleotides in length, preferably at least 30 nucleotides, more preferably at least 50 nucleotides, most preferably at least 100 nucleotides.
  • the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides.
  • the probe used herein is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention.
  • the genes or fragments of the present invention can of course be used as probes.
  • DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the protein product of the proliferating cell antigen P120-51.59 gene can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • polynucleotide sequence of the gene of the present invention or various DM fragments and the like obtained as described above can be measured by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, sequencing needs to be repeated. Sometimes it is necessary to determine the cDM sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using a proliferating cell antigen P120-51.59 coding sequence, and the recombinant technology to produce the present invention Polypeptide method.
  • a polynucleotide sequence encoding a proliferating cell antigen P120 to 51.59 may be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
  • DM sequences and expression vectors with suitable transcriptional / translational regulatory elements include in vitro recombinant DM technology, DM synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Labora tory Manual, Cold Spirit Harbor Labora tory. New York, 1989).
  • the DM sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the lac or trp promoter of E.
  • the expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenoviral enhancers.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • a polynucleotide encoding a proliferating cell antigen P120-51.59 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host cell containing the polynucleotide or the recombinant vector.
  • the term "host cell” refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E.
  • coli Streptomyces
  • bacterial cells such as Salmonella typhimurium
  • fungal cells such as yeast
  • plant cells such as fly S2 or Sf9
  • animal cells such as CH0, COS or Bowes melanoma cells.
  • the polynucleotide sequence of the present invention can be used to express or produce recombinant proliferating cell antigen P120-51. 59 (Science, 1984; 224: 1431). Generally have The following steps:
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If necessary, the recombinant protein can be isolated and purified by various separation methods using its physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid
  • polypeptides of the present invention as well as antagonists, agonists and inhibitors of the polypeptides, can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
  • PCNA Proliferating cell nuclear antigen
  • the polypeptide and the proliferating cell nuclear antigen of the present invention are proliferating cell antigen P120, which contains characteristic sequences of the protein family, and both have similar biological functions.
  • the abnormal expression of the polypeptide in vivo can cause human DNA replication, cell proliferation and the immune system Disorders, which in turn lead to the development of embryonic malformations, tumors, and immune disorders, including but not limited to:
  • Cleft lip (most common, with alveolar cleft and cleft palate), cleft lip, facial oblique cleft, cervical pouch, cervical fistula, etc.
  • Missing limbs Horizontal absence (congenital short limbs): no arms, no forearms, no hands, no fingers, no legs, no toes, etc .; longitudinal absences: radial / ulnar abscess of upper extremity, tibia / fibula absent of lower extremity, etc .;
  • neural tube defects no cerebellar malformations, spina bifida, spinal meningocele, hydrocephalous meningoencephalocele
  • hydrocephalus inside / outside the brain, etc.
  • Papilloma squamous cell carcinoma [skin, nasopharynx, larynx, cervix], adenoma (carcinoma) [breast, thyroid], mucinous / serous cystadenoma (carcinoma) [ovarian], basal cell carcinoma [head and face Skin], (malignant) polytype adenoma [extending gland], papilloma, transitional epithelial cancer [bladder, renal pelvis], etc .;
  • Malignant lymphoma [Neck, mediastinum, mesenteric and retroperitoneal lymph nodes], various leukemias [lymphoid hematopoietic tissue], multiple myeloma [push / thoracic / rib / skull and long bone], etc .;
  • Nerve fiber [systemic cutaneous nerve / deep nerve and internal organs], (malignant) schwannoma [nervous of head, neck, limbs, etc.], (malignant) glioblastoma [brain], medulloblastoma [ Cerebellum], (malignant) meningiomas [meninges 1, ganglioblastoma / neuroblastoma [mediastinum and retroperitoneum / adrenal medulla], etc .;
  • malignant melanoma skin, mucous membrane
  • (malignant) hydatidiform mole chorionic epithelial cancer [uterine]
  • (malignant) supporter cells stromal cell tumor
  • (malignant) granulosa cell tumor ovarian, testicular] fine Blastoma [testis], asexual cell tumor [ovary], embryonal cancer [testis, ovary], (malignant) teratoma [ovary, testis, mediastinum and palate tail], etc .
  • malignant melanoma skin, mucous membrane
  • hydatidiform mole chorionic epithelial cancer [uterine]
  • (malignant) supporter cells stromal cell tumor
  • (malignant) granulosa cell tumor ovarian, testicular] fine Blastoma [testis]
  • asexual cell tumor ovary
  • embryonal cancer testis, ovary
  • (malignant) teratoma
  • Intracellular parasitic infections typhoid, paratyphoid (typhoid), tuberculosis (tuberculosis), leprosy (leprosy), wave thermal conductivity (brutella), etc .;
  • measles virus measles, measles bronchitis, pneumonia, otitis media, subacute sclerosis and panencephalitis
  • herpes virus shingles, chicken pox
  • Humoral immune deficiency can cause various extracellular parasites and various viral infections. These diseases include but are not limited to:
  • poliovirus poliomyelitis
  • hepatitis virus A, B, C, D, E, H, G
  • the invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) the proliferating cell antigen P120-51.59.
  • Do agonists increase proliferating cell antigens? 120-51. 59 stimulates biological functions such as cell proliferation, and antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers.
  • mammalian cells or membrane preparations expressing proliferating cell antigen P120-51.59 can be cultured with labeled proliferating cell antigen P120-51.59 in the presence of drugs. The ability of the drug to increase or block this interaction is then measured.
  • Antagonists of the proliferating cell antigen P120-51.59 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of the proliferating cell antigen P120-51.59 can bind to the proliferating cell antigen P120-51.59 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot function biological functions.
  • the present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies.
  • the invention also provides antibodies directed against the proliferating cell antigen P120-51.59 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by proliferating cell antigen P120-51. 59 by direct injection in immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's Adjuvant, etc. Techniques for preparing monoclonal antibodies to the proliferating cell antigen P120- 51. 59 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridization Tumor technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pat No. 4946778) can also be used to produce single chain antibodies against the anti-proliferating cell antigen P120-51.59. Antibodies against proliferating cell antigen P120-51.59 can be used in immunohistochemical techniques to detect proliferating cell antigen P120-51.59 in biopsy specimens.
  • Monoclonal antibodies that bind to proliferating cell antigen P120-51.59 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins against a specific bead site in the body.
  • High-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP, and bind the toxin to the antibody through the disulfide exchange. This hybrid antibody can be used to kill the proliferating cell antigen P120-51.59 positive Cell.
  • the antibodies of the present invention can be used to treat or prevent diseases related to the proliferating cell antigen P120-5 L 59.
  • the proper dose of antibody can stimulate or block the production or activity of proliferating cell antigen P120-51.59.
  • the invention also relates to a diagnostic test method for quantitatively and locally detecting the level of the proliferating cell antigen P120-51.59.
  • tests are well known in the art and include FISH assays and radioimmunoassays.
  • the level of proliferating cell antigen P120- 51. 59 detected in the test can be used to explain the importance of proliferating cell antigen P120- 51. 59 in various diseases and to diagnose proliferating cell antigen P120 ⁇ ⁇ 51. 59. Disease.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the MA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of the nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding the proliferating cell antigen P120-51.59 can be used for the diagnosis of diseases related to the proliferating cell antigen P120-51.59.
  • the polynucleotide encoding the proliferating cell antigen P120-51.59 can be used to detect the expression of the proliferating cell antigen P120-51.59 or the abnormal expression of the proliferating cell antigen P120-51.59 in a disease state.
  • the DNA sequence encoding the proliferating cell antigen P120- ⁇ 51.59 can be used to hybridize biopsy specimens to determine the expression status of the proliferating cell antigen P120-51.59.
  • Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These techniques and methods are publicly available and mature, and related kits are commercially available.
  • a part or all of the polynucleotide of the present invention can be used as a probe to be fixed on a micro array or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in a tissue.
  • RM-polymerase chain reaction (RT-PCR) in vitro amplification with proliferating cell antigen PU 0-51.59 specific primers can also detect the transcription product of proliferating cell antigen P120-51.59.
  • sequences of the invention are also valuable for chromosome identification. This sequence will be specific to someone The chromosome is in a specific location and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for labeling chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
  • PCR primers (preferably 15-35bp) are prepared from the cDNA, and the sequences can be located on the chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step.
  • FISH Fluorescent in situ hybridization
  • the difference in cDNA or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Proliferating cell antigen P120-51. 59 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and range of P120-51.59 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician. Examples
  • the sequences at the 5 'and 3' ends of all clones were determined using a Dye terminate cycle reaction ionizing kit (Perkin-Elmer) and an ABI 377 automatic sequencer (Perkin-Elmer).
  • the determined cDNA sequence was compared with an existing public DM sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 1212b08 was new DNA.
  • a series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions.
  • the sequence of the proliferating cell antigen P120-51.59 of the present invention and the protein sequence encoded by the same are used by Blas t The program (Basic loca l al ignment search tool) [Al tschul, SF et al. J. Mol. Biol. 1990; 215: 403-10] performs homology search in databases such as Genbank, Switzerland, and so on.
  • the gene with the highest homology to the proliferating cell antigen P ⁇ 0-51.59 of the present invention is a known proliferating cell antigen P120, and the accession number encoded by the protein in Genbank is AJ248288.
  • the protein homology results are shown in Figure 1. The two are highly homologous, with 33% identity; 53% similarity.
  • Example 3 The gene encoding the proliferating cell antigen P120-51.59 was cloned by RT-PCR. The total RNA of fetal brain cells was used as a template, and oligo-dT was used as a primer to perform reverse transcription reaction to synthesize cDNA. , Using the following primers for PCR amplification:
  • Primerl 5'- GGTTTTTGGAAATTGATAGAAAAG -3, (SEQ ID NO: 3)
  • Primer 2 5,-CACATCAAATATTGCTAATTTATT -3 '(SEQ ID NO: 4)
  • Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
  • Amplification reaction conditions containing 50mmol / L KCl in a reaction volume of 50 ⁇ 1, 10mmol / L Tri s-HCl pH8 5, 1. 5mraol / L MgCl 2, 200 ⁇ ⁇ 1 / 1 dNTP, l Opmol primer. 1U of Taq DNA polymerase (Clontech).
  • the reaction was performed on a PE ⁇ OO DM thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min.
  • ⁇ -act in was set as a positive control and template blank was set as a negative control.
  • the amplified product was purified using a QIAGEN kit and ligated to a PCR vector using a TA cloning kit (Invitrogen).
  • the DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as 1-2191bp shown in SEQ ID NO: 1.
  • Example 4 Northern blot analysis of the expression of the proliferating cell antigen P120-51.59 gene Total RM was extracted in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction.
  • the tissue was homogenized with 4M guanidine isothiocyanate-25mM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water.
  • a 32P-labeled probe (approximately 2 ⁇ 10 6 cpm / ral) and RNA-transferred nitrocellulose membrane were placed in a solution at 42 ° C. C hybridization overnight, the solution contains 50% formamide-25mM KH 2 P0 4 (pH7. 4)-5 ⁇ 33 (]-5 ⁇ 061111 & 1, 3 solutions and 20 ( ⁇ 8/1111 salmon sperm 0.)
  • the filter was placed in 1 x SSC-0. 1% SDS at 55 ° C was washed for 30 min. Then, Phosphor Imager was used for analysis and quantification.
  • Example 5 In Vitro Expression, Isolation and Purification of Recombinant Proliferating Cell Antigen P120-51.59
  • design A pair of specific amplification primers was generated, and the sequence is as follows:
  • PCR reaction conditions were: 1 in a total volume of 50 ⁇ plasmid pBS-1212b08 containing 10pg, primer Primer - 3 respectively, and Pr imer- 4 l Opmol, Advantage polymerase Mix (Clontech Products) 1 ⁇ 1.
  • Cycle parameters 94. C 20s, 60. C 30s, 68 ° C 2 min, a total of 25 cycles.
  • Ndel and Hindl11 were used to double-digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase.
  • NH2-Met-Ser-I le-Phe-Pro-Lys-I le-Ser-Leu-Arg-Pro-Glu-Val-Glu-Asn-C00H (SEQ ID NO: 7).
  • the polypeptide is coupled with hemocyanin and bovine serum albumin to form a complex, respectively. See: Avrameas, et al. Immunochemistry, 1969; 6:43. Rabbits were immunized with 4 mg of the hemocyanin polypeptide complex plus complete Freund's adjuvant, and 15 days later, the hemocyanin polypeptide complex plus incomplete Freund's adjuvant was used to boost immunity once.
  • a titer plate coated with 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine the antibody titer in rabbit serum.
  • Total IgG was isolated from antibody-positive rabbit serum using protein A-Sepharose.
  • the peptide was bound to a cyanogen bromide-activated Sephar 0Se 4B column, and the anti-peptide antibody was separated from the total IgG by affinity chromatography.
  • the immunoprecipitation method proved that the purified antibody could specifically bind to the proliferating cell antigen P120-51.59.
  • Example 7 Application of the polynucleotide fragment of the present invention as a hybridization probe
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method Acid sequence or a homologous polynucleotide sequence thereof.
  • Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid.
  • the unhybridized probes are removed by a series of membrane washing steps.
  • This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
  • oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
  • the preferred range of probe size is 18-50 nucleotides
  • the GC content is 30% -70%, and the non-specific hybridization increases when it exceeds; 3. There should be no complementary regions inside the probe;
  • Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other unknown genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
  • Probe 1 which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
  • Probe 1 which belongs to the second type of probe, is equivalent to the replacement mutation sequence of the gene fragment of SEQ ID NO: 1 or its complementary fragment (understand):
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • the 32 P-Probe (the second peak is free ⁇ - 32 P-dATP) is prepared.
  • the sample membrane was placed in a plastic bag, and 3 to 10 mg of prehybridization solution (10xDenhardt> s; 6xSSC, 0.1 mg / ml CT DM (calf thymus DNA)) was added. After sealing the bag, shake at 68 ° C for 2 hours.
  • prehybridization solution 10xDenhardt> s; 6xSSC, 0.1 mg / ml CT DM (calf thymus DNA)

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Abstract

The present invention discloses a novel polypeptide, a proliferating cell antigen P120-51.59, the polynucleotide encoding the polypeptide and the method for producing the polypeptide by DNA recombinant technology. The invention also discloses the uses of the polypeptide in methods for treating various diseases, such as embryonic development deforming, tumour, infection, autoimmune disease, etc. The invention also discloses the agonistes against the polypeptide and the therapeutic action thereof. The invention also discloses the uses of the polynucleotide encoding the novel proliferating cell antigen P120-51.59.

Description

一种新的多肽一增殖细朐,抗原 P120_51.59和编鹆这种多肽的多核苷酸 拮术领域 A new peptide-proliferation cell, antigen P120_51.59 and a polynucleotide encoding this polypeptide Antagonistic field
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一" ϋ 殖细胞抗原 P120— 51.59, 以及编码此多肽的多核苷酸序列。 本发明还涉及此 多核苷酸和多肽的制备方法和应用。 技术背景  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a novel polypeptide, "germ cell antigen P120-51.59, and a polynucleotide sequence encoding the polypeptide. The invention also relates to the polynucleotide and the polypeptide Preparation method and application.Technical background
自我增殖是生物的重要功能。 在细胞分裂过程中, 亲代细胞所含有的遗传 信息会源源本本地传递给两个子细胞, 细胞 DM携带母细胞的一切遗传信息。 因此 DNA需准确地复制成两个拷贝, 分配到两个子细胞中去。 DM复制是一个 非常复杂的酶学过程, 它需要 30 种以上的酶和蛋白质, 人们常把这些酶和蛋 白质称为复制体系, 其中一部分酶和蛋白质结合在一起, 协同动 '作, 构成所谓 复制体。 其中, DNA聚合酶 III是使 DNA链延长的主要的聚合酶, DM聚合酶 ΠΙ极为复杂, 已知它的全酶包含 10种共 22个亚基, 其组成是 α2ε2θ2τ2γSelf-proliferation is an important function of organisms. During the cell division process, the genetic information contained in the parent cell is transmitted to the two daughter cells, and the cell DM carries all the genetic information of the mother cell. Therefore, DNA needs to be accurately copied into two copies and distributed to two daughter cells. DM replication is a very complicated enzymatic process. It requires more than 30 types of enzymes and proteins. People often call these enzymes and proteins a replication system. Some of these enzymes and proteins are combined and work together to form the so-called replication. body. Among them, DNA polymerase III is the main polymerase that lengthens the DNA chain, and DM polymerase II is extremely complicated. It is known that its total enzyme contains 10 kinds of 22 subunits, and its composition is α 2 ε 2 θ 2 τ 2 γ
2 δ,2 δ 2 X 2 ^ 2 Ρ 4。 2 δ, 2 δ 2 X 2 ^ 2 P 4.
增殖细胞核抗原是一种通过作为 DNA聚合酶 delta辅因子作用, 参与 DNA 复制的蛋白, DM聚合酶负责前导链 DNA复制, 此外, PCNA还参与核苷酸切除 修复(Kuriyan et al. J Mol. Bio 234: 915-925 (1993))。 PCNA 是一种结构 特异性核酸内切酶, 具有三至五个接触抗原核酸的外切酶活性, 与核苷酸内切 修复因子同源。 该家族的特征序列模板是两个位于 N-端部分的保守区域: [GA]― [LIVMF] -X- [LIVMA] -x- [SAV] - [LIVM] -D-x- [NSAE]― [HKR]— [VI] -x- [LY] - [VGA] -x- [LIVM] -x- [LIVM] -x (4) -F 及 [RKA] -C- [DE] - [RH] -x (3) - [LIVMF] - x (3) - [LIVM] -x- [SGAN] - [LIVMF] -x-K- [LIVMF] (2) , 第二个模板与 DNA相结合。 该家族成员可用于调节免疫系统活性, 与自身免疫疾病, 癌症等疾病有关, 可 用于治疗移植物抗宿主等疾病 (Bravo R. , Frank R. , Blundell P. A. , McDonald-Bravo H. , Nature 326: 515-517 (1987); Suzuka I. , Hata S. , Matsuoka M. , osugi S. , Hashimoto J. , Eur. J. Biochem. 195: 571- 575 (1991))。  Proliferating cell nuclear antigen is a protein that participates in DNA replication by acting as a DNA polymerase delta cofactor. DM polymerase is responsible for lead strand DNA replication. In addition, PCNA is also involved in nucleotide excision repair (Kuriyan et al. J Mol. Bio 234: 915-925 (1993)). PCNA is a structure-specific endonuclease with three to five exonuclease activities that contact the antigen nucleic acid and is homologous to the endonucleotide repair factor. The signature template of this family is two conserved regions located in the N-terminal part: [GA] ― [LIVMF] -X- [LIVMA] -x- [SAV]-[LIVM] -Dx- [NSAE] ― [HKR ] — [VI] -x- [LY]-[VGA] -x- [LIVM] -x- [LIVM] -x (4) -F and [RKA] -C- [DE]-[RH] -x (3)-[LIVMF]-x (3)-[LIVM] -x- [SGAN]-[LIVMF] -xK- [LIVMF] (2) The second template is combined with DNA. Members of this family can be used to regulate the activity of the immune system, related to autoimmune diseases, cancer and other diseases, and can be used to treat graft versus host diseases (Bravo R., Frank R., Blundell PA, McDonald-Bravo H., Nature 326: 515-517 (1987); Suzuka I., Hata S., Matsuoka M., osugi S., Hashimoto J., Eur. J. Biochem. 195: 571-575 (1991)).
本发明人的多肽与增殖细胞抗原 P120在氨基酸水平上分别有 33%和 53%的 相同性和相似性, 并具有相似的结构特征, 同属于增殖细胞抗原 P120 家族, 故命名为增殖细胞抗原 P120— 51.59, 同时推测其具有相似的生物学功能。 由于如上所述增殖细胞抗原 P120—51. 59蛋白在调节细胞分裂和胚胎发育 '等机体重要功能中起重要作用, 而且相信这些调节过程中涉及大量的蛋白, 因 而本领域中一直需要鉴定更多参与这些过程的增殖细胞抗原 P120— 51. 59 蛋 白, 特别是鉴定这种蛋白的氨基酸序列。 新增殖细胞抗原 P120— 51. 59蛋白编 码基因的分离也为研究确定该蛋白在健康和疾病状态下的作用提供了基础。 这 种蛋白可能构成开发疾病诊断和 /或治疗药的基础, 因此分离其编码 DM 是非 常重要的。 发明目的 The polypeptide of the present invention and the proliferating cell antigen P120 have 33% and 53% identity and similarity at the amino acid level, respectively, and have similar structural characteristics. They both belong to the proliferating cell antigen P120 family and are therefore named as proliferating cell antigen P120 — 51.59, and it is speculated that it has similar biological functions. As described above, the proliferating cell antigen P120-51.59 protein plays an important role in regulating important functions of the body such as cell division and embryo development, and it is believed that a large number of proteins are involved in these regulatory processes, so more needs to be identified in the art The proliferating cell antigen P120-51.59 protein involved in these processes, especially the amino acid sequence of this protein is identified. The isolation of the new proliferating cell antigen P120-51.59 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states. This protein may form the basis for developing diagnostic and / or therapeutic drugs for the disease, so isolating its coding for DM is very important. Object of the invention
本发明的一个目的是提供分离的新的多肽一一增殖细胞抗原 P120—51. 59 以及其片段、 类似物和衍生物。  An object of the present invention is to provide an isolated new polypeptide, a proliferating cell antigen P120-51.59, and fragments, analogs and derivatives thereof.
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码增殖细胞抗原 P120—51. 59的多核苷 酸的重组载体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding a proliferating cell antigen P120-51.59.
本发明的另一个目的是提供含有编码增殖细胞抗原 P120—51. 59的多核苷 酸的基因工程化宿主细胞。  Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding a proliferating cell antigen P120-51.59.
本发明的另一个目的是提供生产增殖细胞抗原 P120—51. 59的方法。  Another object of the present invention is to provide a method for producing a proliferating cell antigen P120-51.59.
本发明的另一个目的是提供针对本发明的多肽——增殖细胞抗原 P120— Another object of the present invention is to provide the polypeptide of the present invention-proliferating cell antigen P120-
51. 59的抗体。 51. 59 antibodies.
本发明的另一个目的是提供了针对本发明多肽——增殖细胞抗原 P120— 51. 59的模拟化合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors against the polypeptide of the present invention, the proliferating cell antigen P120-51.59.
本发明的另一个目的是提供诊断治疗与增殖细胞抗原 P120— 51. 59异常相 关的疾病的方法。 发明概要  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of the proliferating cell antigen P120-51.59. Summary of invention
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ ID No. 2 氨基酸序列的多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该 多肽是具有 SEQ ID NO: 2氨基酸序列的多肽。  The present invention relates to an isolated polypeptide, which is of human origin and comprises: a polypeptide having the amino acid sequence of SEQ ID No. 2, or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或 其变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. 2氨基酸序列的多肽的多核苷酸;  (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸; (c)与(a)或(b)的多核苷酸序列具有至少 70%相同性的多核苷酸。 (b) a polynucleotide complementary to polynucleotide (a); (c) A polynucleotide having at least 70% identity to a polynucleotide sequence of (a) or (b).
更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 400-1809位的序列; 和(b)具有 SEQ ID NO: 1中 1-2191位的序列。  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 400-1809 in SEQ ID NO: 1; and (b) a sequence having 1-2191 in SEQ ID NO: 1 Sequence of bits.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种 用该载体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包 括培养所述宿主细胞和回收表达产物的制备本发明多肽的方法。  The present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。  The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制增殖细胞抗原 P120— 51. 59蛋白活性的化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用 该方法获得的化合物。  The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of the proliferating cell antigen P120-51.59 protein, which comprises using the polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与增殖细胞抗原 P120—51. 59蛋白异常表达相关 的疾病或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸序 列中的突变, 或者检测生物样品中本发明多肽的量或生物活性。  The present invention also relates to a method for detecting a disease or susceptibility to disease associated with abnormal expression of a proliferating cell antigen P120-51.59 protein in vitro, comprising detecting a mutation in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample, or Detection of the amount or biological activity of a polypeptide of the invention in a biological sample.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗癌症、 发育性 疾病或免疫性疾病或其它由于增殖细胞抗原 P120—51. 59表达异常所引起疾病 的药物的用途。  The present invention also relates to the use of the polypeptide and / or polynucleotide of the present invention in the preparation of a medicament for treating cancer, developmental disease or immune disease or other diseases caused by abnormal expression of proliferating cell antigen P120-51.59.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。  Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein.
下列附图用于说明本发明的具体实施方案, 而不用于限定由权利要求书所 界定的本发明范围。 The following drawings are used to illustrate specific embodiments of the invention, but not to limit the scope of the invention as defined by the claims.
图 1是本发明增殖细胞抗原 P120— 51. 59和增殖细胞抗原 P120的氨基酸序列 同源性比较图。 上方序列是增殖细胞抗原 P120— 51. 59, 下方序列是增殖细胞 抗原 P120。 相同氨基酸在两个序列间用单字符氨基酸表示, 相似氨基酸用 "+" 表不。  Fig. 1 is a comparison diagram of the amino acid sequence homology of the proliferating cell antigen P120-51.59 and the proliferating cell antigen P120 of the present invention. The upper sequence is the proliferating cell antigen P120-51.59, and the lower sequence is the proliferating cell antigen P120. Identical amino acids are represented by single-character amino acids between the two sequences, and similar amino acids are represented by "+".
图 2为分离的增殖细胞抗原 P120— 51. 59的聚丙烯酰胺凝胶电泳图 ( SDS - PAGE ) 。 51. 59kDa为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 发明内容  Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated proliferating cell antigen P120-51.59. 51. 59kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. Summary of the Invention
本说明书和杈利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以 指基因组或合成的 DNA或 RM, 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部 分。 当本发明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序 列时, 这种 "多肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质 分子相关的完整的天然氨基酸。 Unless otherwise specified, the following terms used in this specification and the requirements have the following meanings: "Nucleic acid sequence" refers to oligonucleotides, nucleotides or polynucleotides and fragments or parts thereof, and may also refer to genomic or synthetic DNA or RM, which may be single-stranded or double-stranded, representing the sense strand or Antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变 的氨基酸序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸 序列中氨基酸或核苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其 中替换的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异 亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A "variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的 缺失。  "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存 在的分子相比, 一个或多个氨基酸或核苷酸的增加。 "替换" 是指由不同的氨基酸 或核苷酸替换一个或多个氨基酸或核苷酸。  "Insert" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
"生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类 似地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的 动物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to a protein that has the structure, regulation, or biochemical function of a natural molecule. Similarly, the term "immunologically active" refers to the ability of natural, recombinant or synthetic proteins and fragments thereof to induce a specific immune response and to bind specific antibodies in a suitable animal or cell.
"激动剂" 是指当与增殖细胞抗原 P120— 51. 59结合时, 一种可引起该蛋 白质改变从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水 化合物或任何其它可结合增殖细胞抗原 P120— 51. 59的分子。  An "agonist" refers to a molecule that, when combined with the proliferating cell antigen P120-51.59, can cause changes in the protein and thereby regulate the activity of the protein. Agonists can include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to the proliferating cell antigen P120-51.59.
"拮抗剂" 或 "抑制物" 是指当与增殖细胞抗原 P12 0— 51. 59结合时, 一 种可封闭或调节增殖细胞抗原 P120— 51. 59的生物学活性或免疫学活性的分 子。 拮抗剂和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合增 殖细胞抗原 P 120— 51. 59的分子。  An "antagonist" or "inhibitor" refers to a molecule that can block or regulate the biological or immunological activity of the proliferating cell antigen P120-51.59 when combined with the proliferating cell antigen P120-51.59. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates or any other molecule that can bind to the proliferating cell antigen P 120-51.59.
"调节" 是指增殖细胞抗原 P120— 51. 59的功能发生改变, 包括蛋白质活 性的升高或降低、 结合特性的改变及增殖细胞抗原 P120— 51. 59的任何其它生 物学性质、 功能或免疫性质的改变。  "Regulation" refers to a change in the function of the proliferating cell antigen P120-51.59, including an increase or decrease in protein activity, a change in binding characteristics, and any other biological property, function, or immunity of the proliferating cell antigen P120-51.59. Change of nature.
"基本上纯' '是指基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物 质。 本领域的技术人员能用标准的蛋白质纯化技术纯化增殖细胞抗原 P120— 51. 59。 基本上纯的增殖细胞抗原 P120—51. 59在非还原性聚丙烯酰胺凝胶上能产 生单一的主带。 增殖细胞抗原 P120— 51. 59多肽的纯度可用氨基酸序列分析。 "Substantially pure '" means essentially free of other proteins, lipids, carbohydrates or other substances with which it is naturally associated. Those skilled in the art can purify proliferating cell antigen P120-51.59 using standard protein purification techniques. Basically pure proliferating cell antigen P120-51.59 can be produced on non-reducing polyacrylamide gels Create a single main band. The purity of the proliferating cell antigen P120-51.59 polypeptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的 多核苷酸天然结合。 例如, 序列 "C-T-G-A" 可与互补的序列 "G-A-C- T" 结合。 两个单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于 核酸链之间杂交的效率及强度有明显影响。  "Complementary" or "complementary" refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-T-G-A" can be combined with the complementary sequence "G-A-C-T". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂 交。 这种杂交的抑制可通过在严格性程度降低的条件下进行杂交 (Southern印 迹或 Northern印迹等) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完 全同源的序列与靶序列在严格性程度降低的条件下的结合。 这并不意味严格性 程度降低的条件允许非特异性结合, 因为严格性程度降低的条件要求两条序列 相互的结合为特异性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Northern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that the conditions of reduced stringency allow non-specific binding, because the conditions of reduced stringency require that the two sequences bind to each other as a specific or selective interaction.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或 相似的百分率。 可用电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. ) 。 MEGALIGN 程序可根据不同的方法如 Clus ter法比较两种或多种序列(Higg ins, D. G. 和 P. M. Sharp (1988) Gene 73: 237-244) a Clus ter法通过检查所有配对之间的 距离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如 序列 A和序列 B之间的相同性百分率通过下式计算: "Percent identity" refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences (Higg ins, DG and PM Sharp (1988) Gene 73: 237-244) in different ways according to method a Clus ter Clus ter method checks the distance between each of all pairs Group sequences are arranged in clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula:
序列 ^与序列 ^之间匹配的残基个数  Number of residues matching between sequence ^ and sequence ^
序列 ^的残基数 -序列^ (中间隔残基数一序列 3中间隔残基数 X Number of residues in sequence ^-sequence ^ (number of intermediate residues-number of interval residues in sequence 3 X
也可以通过 Clus ter法或用本领域周知的方法如: Fotun Hein 测定核酸序列 之间的相同性百分率(Hein J. , (1990) Methods in enzymology 183: 625-645) 0 Clus ter method or may be used as known in the art by: Fotun Hein Determination of percentage identity between nucleic acid sequences (Hein J., (1990) Methods in enzymology 183: 625-645) 0
"相似性" 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同 或保守性取代的程度。 用于保守性取代的氨基酸, 例如带负电荷的氨基酸可包 括天冬氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电 荷的头部基团有相似亲水性的氨基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨 酸和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。 "Similarity" refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment of amino acid sequences. Amino acids used for conservative substitution, for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RNA序列互补的核苷酸序列。 "反义链" 是指 与 "有义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to a "sense strand."
"衍生物" 是指 HFP或编码其核酸的化学修饰物。 这种化学修饰物可以是 用烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物 学特性的多肽。 "Derivative" refers to HFP or a chemical modification of its nucleic acid. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives encode major organisms that retain natural molecules Peptides with chemical properties.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 F (ab,)2及 Fv , 其能特异 性结合增殖细胞抗原 P120— 51. 59的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa, F (ab,) 2 and Fv, which can specifically bind to the epitope of the proliferating cell antigen P120-51.59.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体 更为相似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其 天然环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物 中就是没有被分离出来, 但同样的多核苷酸或多肽同一些或全部在自然系统中 与之共存的物质分开就是分离的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是 它天然环境的成分, 它们仍然是分离的。  The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring). For example, a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system. Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天 然的物质, 原始环境即是天然环境) 。 如活体细胞内的天然状态下的多聚核苷 酸和多肽是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存 在的其他物质中分开, 则为分离纯化的。  As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
如本文所用, "分离的增殖细胞抗原 P120—51. 59 " 是指增殖细胞抗原 P120— 51. 59 基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化增殖细胞抗原 P120— 51. 59。 基本上纯的多肽在非还原聚丙烯酰胺凝胶上能产生单一的主带。 增殖 细胞抗原 P120—51. 59多肽的纯度能用氨基酸序列分析。  As used herein, "isolated proliferating cell antigen P120-51.59" refers to proliferating cell antigen P120-51.59 that is substantially free of other proteins, lipids, sugars, or other substances with which it is naturally associated. Those skilled in the art can purify proliferating cell antigen P120-51.59 using standard protein purification techniques. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the proliferating cell antigen P120-51.59 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一增殖细胞抗原?120—51. 59 , 其基本上是由 SEQ ID NO: 2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合 成多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成的 产物, 或使用重组技术从原核或真核宿主(例如, 细菌、 酵母、 高等植物、 昆虫和 哺乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖基 化的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸残 基。  The invention provides a novel polypeptide-proliferating cell antigen? 120-51.59, which basically consists of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the present invention can be naturally purified products, or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude initial methionine residues.
本发明还包括增殖细胞抗原 P120— 51. 59的片段、 衍生物和类似物。 如本 发明所用, 术语 "片段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明的 增殖细胞抗原 P120— 51. 59相同的生物学功能或活性的多肽。 本发明多肽的片 段、 衍生物或类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残基被 保守或非保守氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的氨基 酸可以是也可以不是由遗传密码子编码的; 或者 ( I I ) 这样一种, 其中一个或 多个氨基酸残基上的某个基团被其它基团取代包含取代基; 或者 ( Π Ι ) 这样 一种, 其中成熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例如聚 乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟多肽 而形成的多肽序列 (如前导序列或分泌序列或用来纯化此多肽的序列或蛋白原 序列) 。 通过本文的阐述, 这样的片段、 衍生物和类似物被认为在本领域技术 人员的知识范围之内。 The invention also includes fragments, derivatives and analogs of the proliferating cell antigen P120-51.59. As used in the present invention, the terms "fragment", "derivative" and "analog" refer to a polypeptide that substantially maintains the same biological function or activity of the proliferating cell antigen P120-51.59 of the present invention. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution Amino An acid may or may not be encoded by a genetic codon; or (II) such a type in which a group on one or more amino acid residues is substituted by another group to include a substituent; or (Π Ι) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide ( Such as leader sequences or secreted sequences or sequences used to purify this polypeptide or protease sequences). As set forth herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) , 基本由编码具有 SEQ ID NO: 2 氨 基酸序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID N0: 1 的 核苷酸序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包 含的多核苷酸序列全长为 2191个碱基, 其开放读框 400-1809编码了 469个氨 基酸。 根据氨基酸序列同源比较发现, 此多肽与增殖细胞抗原 P120 有 33%的 同源性, 可推断出该增殖细胞抗原 P120— 51. 59 具有增殖细胞抗原 P120相似 的结构和功能。  The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a full-length polynucleotide sequence of 2191 bases, and its open reading frame 400-1809 encodes 469 amino acids. According to the amino acid sequence homology comparison, it was found that this polypeptide has 33% homology with the proliferating cell antigen P120, and it can be deduced that the proliferating cell antigen P120-51. 59 has similar structure and function to the proliferating cell antigen P120.
本发明的多核苷酸可以是 DNA形式或是 RNA形式。 DNA形式包括 cDM、 基 因组 DNA或人工合成的 DNA。 DNA 可以是单链的或是双链的。 DNA 可以是编码 链或非编码链。 编码成熟多肽的编码区序列可以与 SEQ ID NO: 1所示的编码区 序列相同或者是简并的变异体。 如本发明所用, "简并的变异体" 在本发明中 是指编码具有 SEQ ID NO: 2的蛋白质或多肽, 但与 SEQ ID NO: 1所示的编码区 序列有差别的核酸序列。  The polynucleotide of the present invention may be in the form of DNA or RNA. DNA forms include cDM, genomic DNA, or synthetic DNA. DNA can be single-stranded or double-stranded. DNA can be coding or non-coding. The coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant. As used herein, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
编码 SEQ ID N0: 2的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附 加编码序列) 以及非编码序列。  The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加 编码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基 酸序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天 然发生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异 体、 缺失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸 的替换形式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质 上改变其编码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至 少 50%, 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所 述多核苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低 离子强度和较高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1%SDS,60 °C ;或(2)杂交 时加用变性剂, 如 50% (v/v)甲酰胺, 0. lVj、牛血清 / 0. l%Fi col l , 42 °C等; 或 (3)仅在两条序列之间的相同性至少在 95%以上,更好是 97%以上时才发生杂 交。 并且, 可杂交的多核苷酸编码的多肽与 SEQ ID NO: 2 所示的成熟多肽有 相同的生物学功能和活性。 The present invention also relates to a polynucleotide that hybridizes to a sequence described above 50% less, preferably 70% identity). The invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add denaturants during hybridization, such as 50% (v / v) formamide, 0.1Vj, bovine serum / 0.1% Fi col l, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核 酸片段"的长度至少含 10个核苷酸, 较好是至少 20- 30个核苷酸, 更好是至少 50-60 个核苷酸, 最好是至少 100个核苷酸以上。 核酸片段也可用于核酸的扩 增技术(如 PCR)以确定和 /或分离编码增殖细胞抗原 P120— 51. 59的多核苷酸。  The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used in the present invention, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nuclei. Glycylic acid or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques (such as PCR) to identify and / or isolate polynucleotides encoding the proliferating cell antigen P120-51.59.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本发明的编码增殖细胞抗原 P120—51. 59 的特异的多核苷酸序列能用多种 方法获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不 局限于: 1)用探针与基因组或 cDNA文库杂交以检出同源的多核苷酸序列, 和 2) 表达文库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence encoding the proliferating cell antigen P120-51.59 of the present invention can be obtained by various methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DM片段序列也能用下列方法获得: 1)从基因组 DNA分离双链 DNA 序列; 2)化学合成 DM序列以获得所述多肽的双链 DNA。  The DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DM sequence to obtain the double-stranded DNA of the polypeptide.
上述提到的方法中, 分离基因组 DM 最不常用。 DM序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDM序列的分离。 分离感兴趣的 cDNA 的标准方法是从高表达该基因的供体细胞分离 mRM 并进行逆转录, 形成质粒 或噬菌体 cDNA文库。 提取 mRNA的方法已有多种成熟的技术, 试剂盒也可从商 业途径获得(Qiagene)。 而构建 cDM 文库也是通常的方法(Sambrook, et a l. , Molecular Cloning, A Laboratory Manual , Cold Spr ing Harbor Laboratory. New York, 1989)。还可得到商业供应的 cDNA文库,如 Clontech公司的不同 cDNA 文库。 当结合使用聚合酶反应技术时, 即使极少的表达产物也能克隆。  Of the methods mentioned above, genomic DM is the least commonly used. Direct chemical synthesis of DM sequences is often the method of choice. The more commonly used method is the separation of cDM sequences. The standard method for isolating the cDNA of interest is to isolate mRM from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library. Various methods have been used to extract mRNA, and kits are also commercially available (Qiagene). It is also a common method to construct a CDM library (Sambrook, et al., Molecular Cloning, A Laboratory Manual, Cold Spiring Harbor Laboratory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l) DNA- DNA 或 DNA-RNA 杂交; (2)标志基因功能的出现或丧失; (3)测 定增殖细胞抗原 Ρ120·~51. 59 的转录本的水平; (4)通过免疫学技术或测定生 物学活性, 来检测基因表达的蛋白产物。 上述方法可单用, 也可多种方法联合 应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the appearance or loss of marker gene function; (3) determination of the level of transcripts of proliferating cell antigen P120 · ~ 51.59 (4) Detecting protein products expressed by genes through immunological techniques or measuring biological activity. The above methods can be used alone or in combination.
在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分 同源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 50个 核苷酸, 最好是至少 100 个核苷酸。 此外, 探针的长度通常在 2000 个核苷酸 之内, 较佳的为 1000 个核苷酸之内。 此处所用的探针通常是在本发明的基因 序列信息的基础上化学合成的 DNA序列。 本发明的基因本身或者片段当然可以 用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。 In the method (1), the probe used for hybridization is any part of the polynucleotide of the present invention Homologous, at least 10 nucleotides in length, preferably at least 30 nucleotides, more preferably at least 50 nucleotides, most preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides. The probe used herein is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检测增殖细胞抗原 P120—51. 59 基因表达的蛋白产物 可用免疫学技术如 Wes tern印迹法、 放射免疫沉淀法、 酶联免疫吸附法(ELISA) 等。  In the (4) method, the protein product of the proliferating cell antigen P120-51.59 gene can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
应 用 PCR 技术 扩增 DNA/RNA 的 方 法 (Sa ik i , et a l. Sc ience 1985; 230: 1350 - 1 354)被优选用于获得本发明的基因。 特别是很难从文库中得 到全长的 cDNA时,可优选使用 RACE法(RACE - cDNA末端快速扩增法),用于 PCR 的引物可根据本文所公开的本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方法如通过凝胶电泳分离和纯化扩增的 DM/RNA片段。  A method (Sa ik i, et al. Sc ience 1985; 230: 1350-1 354) using PCR technology to amplify DNA / RNA is preferably used to obtain the gene of the present invention. In particular, when it is difficult to obtain a full-length cDNA from a library, the RACE method (RACE-Rapid Amplification of cDNA Ends) can be preferably used. The primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein Select and synthesize using conventional methods. The amplified DM / RNA fragment can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DM 片段等的多核苷酸序列可用 常规方法如双脱氧链终止法(Sanger et a l. PNAS , 1977 , 74: 5463- 5467)测 定。 这类多核苷酸序列测定也可用商业测序试剂盒等。 为了获得全长的 cDNA 序列, 测序需反复进行。 有时需要测定多个克隆的 cDM 序列, 才能拼接成全 长的 cDNA序列。  The polynucleotide sequence of the gene of the present invention or various DM fragments and the like obtained as described above can be measured by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, sequencing needs to be repeated. Sometimes it is necessary to determine the cDM sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接 用增殖细胞抗原 P120—51. 59 编码序列经基因工程产生的宿主细胞, 以及经重 组技术产生本发明所述多肽的方法。  The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using a proliferating cell antigen P120-51.59 coding sequence, and the recombinant technology to produce the present invention Polypeptide method.
本发明中, 编码增殖细胞抗原 P120~~51. 59 的多核苷酸序列可插入到载体 中, 以构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知 的细菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆转录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达 的基于 T7 启动子的表达载体(Rosenberg, et a l. Gene, 1987, 56: 125); 在 哺乳动物细胞中表达的 pMSXND 表达载体(Lee and Na thans, J Bio Chem. 263: 3521, 1988)和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能 在宿主体内复制和稳定, 任何质粒和载体都可以用于构建重组表达载体。 表达 载体的一个重要特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元 件。 In the present invention, a polynucleotide sequence encoding a proliferating cell antigen P120 to 51.59 may be inserted into a vector to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors (Rosenberg, et al. Gene, 1987, 56: 125) expressed in bacteria; pMSXND expression vectors expressed in mammalian cells (Lee and Na thans, J Bio Chem. 2 63: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in a host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码增殖细胞抗原 P120— 51. 59的 DM序列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外 重组 DM技术、 DM合成技术、 体内重组技术等(Sambroook, et a l. Molecular Cloning, a Labora tory Manual, Cold Spr ing Harbor Labora tory. New York, 1989)。 所述的 DM序列可有效连接到表达载体中的适当启动子上, 以指导 mRNA 合成。 这些启动子的代表性例子有: 大肠杆菌的 lac或 trp启动子; λ噬菌体 的 PL启动子; 真核启动子包括 CMV立即早期启动子、 HSV胸苷激酶启动子、 早 期和晚期 SV40启动子、 反转录病毒的 LTRs和其它一些已知的可控制基因在原 核细胞或真核细胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核 糖体结合位点和转录终止子等。 在载体中插入增强子序列将会使其在高等真核 细胞中的转录得到增强。 增强子是 DNA 表达的顺式作用因子, 通常大约有 10 到 300 个碱基对, 作用于启动子以增强基因的转录。 可举的例子包括在复制起 始点晚期一侧的 100 到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧 的多瘤增强子以及腺病毒增强子等。 Methods well known to those skilled in the art can be used to construct a gene containing proliferating cell antigen P120- 51. 59 DM sequences and expression vectors with suitable transcriptional / translational regulatory elements. These methods include in vitro recombinant DM technology, DM synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Labora tory Manual, Cold Spirit Harbor Labora tory. New York, 1989). The DM sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: the lac or trp promoter of E. coli; the PL promoter of lambda phage; eukaryotic promoters include the CMV immediate early promoter, the HSV thymidine kinase promoter, the early and late SV40 promoters, Retroviral LTRs and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site and a transcription terminator for translation initiation. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenoviral enhancers.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP) , 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码增殖细胞抗原 P120—51. 59 的多核苷酸或含有该多核苷酸 的重组载体可转化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的基 因工程化宿主细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等真 核细胞, 如酵母细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大肠杆菌, 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细 胞; 昆虫细胞如果蝇 S2或 Sf9; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等。  In the present invention, a polynucleotide encoding a proliferating cell antigen P120-51.59 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to form a genetically engineered host cell containing the polynucleotide or the recombinant vector. . The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: E. coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly S2 or Sf9; animal cells such as CH0, COS or Bowes melanoma cells.
用本发明所述的 DNA序列或含有所述 DM序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaCl 处理, 所用的步驟 在本领域众所周知。 可供选择的是用 MgCl2。 如果需要, 转化也可用电穿孔的 方法进行。 当宿主是真核生物, 可选用如下的 DNA转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 Transformation of a host cell with a DNA sequence according to the present invention or a recombinant vector containing the DM sequence can be performed using conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after exponential growth and treated with CaCl. The steps used are well known in the art. Alternatively, MgCl 2 is used. If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA技术, 利用本发明的多核苷酸序列可用来表达或生产 重组的增殖细胞抗原 P120-51. 59 (Sc ience , 1984 ; 224: 1431)。 一般来说有 以下步骤: Using conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce recombinant proliferating cell antigen P120-51. 59 (Science, 1984; 224: 1431). Generally have The following steps:
(1) 用本发明的编码人 增殖细胞抗原 P120— 51. 59 的多核苷酸(或变异 体), 或用含有该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using a polynucleotide (or variant) encoding the human proliferating cell antigen P120-51.59 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2) 在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
(3) 从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 (2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。  In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 ( 3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌 到细胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法 分离和纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括 但并不限于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液相层析(HPLC)和其它各种液相层析技术及这些方法的结合。  In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If necessary, the recombinant protein can be isolated and purified by various separation methods using its physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治 疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和 免疫性疾病等。  The polypeptides of the present invention, as well as antagonists, agonists and inhibitors of the polypeptides, can be directly used in the treatment of diseases, for example, they can treat malignant tumors, adrenal deficiency, skin diseases, various types of inflammation, HIV infection, and immune diseases.
增殖细胞核抗原 (PCNA )是一种 DM聚合酶 del ta辅因子。 在人体内, 它 参与 DNA复制和核苷酸切除修复的过程。 此外, 该蛋白家族成员还具有调节免 疫系统活性的作用。 其表达异常可引起人体 DNA复制、 细胞增殖以及免疫系统 的紊乱, 进而导致相关疾病的发生。  Proliferating cell nuclear antigen (PCNA) is a DM polymerase del ta cofactor. In the human body, it is involved in the processes of DNA replication and nucleotide excision repair. In addition, members of this protein family also play a role in regulating the activity of the immune system. Its abnormal expression can cause human DNA replication, cell proliferation, and disorders of the immune system, which can lead to the occurrence of related diseases.
本发明的多肽与增殖细胞核抗原是增殖细胞抗原 P120 , 含该蛋白家族的 特征性序列, 两者具有相似的生物学功能, 本多肽在体内的异常表达可引起人 体 DNA复制、 细胞增殖以及免疫系统的紊乱, 进而导致胚胎发育畸形、 肿瘤、 免疫紊乱性疾病的发生, 这些疾病包括但不限于:  The polypeptide and the proliferating cell nuclear antigen of the present invention are proliferating cell antigen P120, which contains characteristic sequences of the protein family, and both have similar biological functions. The abnormal expression of the polypeptide in vivo can cause human DNA replication, cell proliferation and the immune system Disorders, which in turn lead to the development of embryonic malformations, tumors, and immune disorders, including but not limited to:
常见胚胎发育畸形  Common Embryonic Malformations
一. 颜面、 颈和四肢的常见畸形:  1. Common deformities of face, neck and limbs:
1. 唇裂 (最常见, 可伴有牙槽突裂和腭裂) , 腭裂, 面斜裂, 颈囊, 颈 瘘等;  1. Cleft lip (most common, with alveolar cleft and cleft palate), cleft lip, facial oblique cleft, cervical pouch, cervical fistula, etc.
2. 四肢的常见畸形:  2. Common deformities of the limbs:
1 )肢体缺如: 横向缺如 (先天性短肢) : 无臂, 无前臂, 无手, 无指, 无腿, 无趾等; 纵向缺如: 上肢桡 /尺侧缺如, 下肢胫 /腓侧缺如等; 1) Missing limbs: Horizontal absence (congenital short limbs): no arms, no forearms, no hands, no fingers, no legs, no toes, etc .; longitudinal absences: radial / ulnar abscess of upper extremity, tibia / fibula absent of lower extremity, etc .;
海豹样手 /足畸形等;  Seal-like hand / foot deformities, etc .;
2) 肢体分化障碍: 某块肌肉或肌群缺如, 关节发育不良, 骨畸形, 骨融合, 多指 (趾), 并指(趾)畸形, 马蹄内翻足等;  2) Limb differentiation disorder: Absence of a certain muscle or muscle group, joint dysplasia, bone deformity, bone fusion, multi-finger (toe) deformity, finger (toe) deformity, horseshoe varus, etc .;
二. 消化系统的常见畸形:  Common malformations of the digestive system:
甲状舌管嚢肿, 消化管闭锁或狭窄, 回肠憩室, 脐瘘, 先天性脐疝, 先天性 无神经节性巨结肠, 不通肛, 肠絆转位异常, 胆管闭锁, 环状胰等;  Bloating thyroglossal ducts, occlusion or stenosis of the digestive tract, ileal diverticulum, umbilical fistula, congenital umbilical hernia, congenital aganglion-free megacolon, impervious anus, abnormal bowel transition, bile duct atresia, circular pancreas, etc
三. 呼吸系统的常见畸形: 喉气管狭窄 /闭锁, 气管食管瘘, 透明膜病, 单 侧肺不发生, 异位肺叶, 先天性肺囊肿, 肺膨胀不全等;  3. Common malformations of the respiratory system: laryngotracheal stenosis / occlusion, tracheoesophageal fistula, hyaline membrane disease, unilateral lung does not occur, ectopic lung lobe, congenital lung cyst, pulmonary insufficiency, etc .;
四. 泌尿系统的常见畸形: 多囊肾, 异位肾, 马蹄肾, 双输尿管, 脐尿瘘, 膀胱外翻等;  4. Common deformities of the urinary system: polycystic kidney, ectopic kidney, horseshoe kidney, double ureter, umbilical fistula, bladder eversion, etc.
五. 生殖系统的常见畸形: 隐睾, 先天性腹股沟疝, 双子宫, 阴道闭锁, 尿道下裂, 真 /假两性畸形, 睾丸女性化综合征等;  V. Common malformations of the reproductive system: cryptorchidism, congenital inguinal hernia, double uterus, vaginal atresia, hypospadias, true / false hermaphroditism, testicular feminization syndrome, etc.
六. 心血管系统的常见畸形: 房间隔缺损, 室间隔缺损, 动脉干分隔异常 (主动脉和肺动脉错位、 主动脉或肺动脉狭窄), 动脉导管未闭等;  6. Common malformations of the cardiovascular system: atrial septal defect, ventricular septal defect, abnormal separation of arterial trunk (dislocation of aorta and pulmonary artery, aortic or pulmonary stenosis), open artery duct, etc.
七. 神经系统的常见畸形: 神经管缺陷 (无脑畸形、 脊髓裂、 脊髓脊膜 膨出、 积水性脑膜脑膨出) , 脑内 /外脑积水等;  7. Common malformations of the nervous system: neural tube defects (no cerebellar malformations, spina bifida, spinal meningocele, hydrocephalous meningoencephalocele), hydrocephalus inside / outside the brain, etc.
八. 眼、 耳的常见畸形: 虹膜缺损, 瞳孔膜存留, 先天性白内障, 先天 性青光眼, 独 /无 /小眼畸形, 先天性耳聋, 耳廓畸形等;  8. Common malformations of eyes and ears: iris defect, retention of pupillary membrane, congenital cataract, congenital glaucoma, sole / no / small eye deformity, congenital deafness, auricle deformity, etc.
各种组织常见肿瘤:  Common tumors in various tissues:
一. 上皮组织:  I. Epithelial tissue:
乳头状瘤, 鳞状细胞癌 【皮肤、 鼻咽、 喉、 宫颈】 , 腺瘤(癌) 【乳腺、 甲 状腺】 , 粘 /浆液性囊腺瘤(癌) 【卵巢】 , 基底细胞癌 【头面部皮肤】 ,(恶性) 多型性腺瘤 【延腺】 , 乳头状瘤、 移行上皮癌 【膀胱、 肾盂】 等;  Papilloma, squamous cell carcinoma [skin, nasopharynx, larynx, cervix], adenoma (carcinoma) [breast, thyroid], mucinous / serous cystadenoma (carcinoma) [ovarian], basal cell carcinoma [head and face Skin], (malignant) polytype adenoma [extending gland], papilloma, transitional epithelial cancer [bladder, renal pelvis], etc .;
二. 间叶组织:  Mesenchymal organization:
纤维(肉)瘤 【四肢】 , (恶性)纤维组织细胞瘤 【四肢】 , 脂肪(肉)瘤 【皮 下组织、 下肢、 腹膜后】 , 平滑肌(肉)瘤 【子宫和胃肠】 , 横紋肌(肉)瘤 【头 颈、 生殖泌尿道、 四肢】 , 血管(肉)瘤、 淋巴管(肉)瘤 【皮肤、 皮下组织、 舌、 唇】 , 骨(肉)瘤 【颅骨、 长骨】 , (恶)性巨细胞瘤 【股 /胫 /肱骨上端】 , 软骨 (肉)瘤 【手足短骨、 盆 /肋 /股 /肱 /肩胛骨】 , 滑膜(肉)瘤 【膝 /踝 /腕 /肩 /肘关 节附近】 , (恶)性间皮瘤 【胸 /腹膜】 等; 三. 淋巴造血组织: Fibrous (sarcoma) [limbs], (Malignant) fibrohistiocytoma [limbs], lipo (sarcoma) [subcutaneous tissue, lower limbs, retroperitoneum], leiomyosarcoma (uterus and gastrointestinal), striated muscle (Sarcoma) [head and neck, genitourinary tract, limbs], hemangio (sarcoma), lymphangioma (sarcoma) [skin, subcutaneous tissue, tongue, lips], bone (sarcoma) [cranium, long bone], (malignant Giant cell tumor [femoral / tibia / upper humerus], cartilage (sarcoma) [hand and foot short bone, pelvis / rib / femur / humerus / scapula], synovial (sarcoma) tumor [knee / ankle / wrist / shoulder / Near the elbow], (malignant) mesothelioma [thoracic / peritoneal], etc .; Three. Lymphatic hematopoietic tissue:
恶性淋巴瘤 【颈部、 纵隔、 肠系膜和腹膜后淋巴结】 , 各种白血病 【淋巴 造血组织】 , 多发性骨髓瘤 【推 /胸 /肋 /颅骨和长骨】 等;  Malignant lymphoma [Neck, mediastinum, mesenteric and retroperitoneal lymph nodes], various leukemias [lymphoid hematopoietic tissue], multiple myeloma [push / thoracic / rib / skull and long bone], etc .;
四. 神经组织:  4. Nervous tissue:
神经纤维(肉)瘤 【全身皮神经 /深部神经及内脏】 , (恶性)神经鞘瘤 【头、 颈、 四肢等处神经】 , (恶性)胶质细胞瘤 【大脑】 , 髓母细胞瘤 【小脑】 , (恶 性)脑膜瘤 【脑膜 1 , 节神经细胞瘤 /神经母细胞瘤 【纵隔和腹膜后 /肾上腺髓 质】 等;  Nerve fiber (sarcoma) [systemic cutaneous nerve / deep nerve and internal organs], (malignant) schwannoma [nervous of head, neck, limbs, etc.], (malignant) glioblastoma [brain], medulloblastoma [ Cerebellum], (malignant) meningiomas [meninges 1, ganglioblastoma / neuroblastoma [mediastinum and retroperitoneum / adrenal medulla], etc .;
五. 其他肿瘤:  V. Other tumors:
黑痣, 恶性黑色素瘤 【皮肤、 粘膜】 , (恶性)葡萄胎, 绒毛膜上皮癌 【子 宫】 , (恶性)支持细胞、 间质细胞瘤, (恶性)颗粒细胞瘤 【卵巢、 睾丸】 , 精 原细胞瘤 【睾丸】 , 无性细胞瘤 【卵巢】 , 胚胎性癌 【睾丸、 卵巢】 , (恶性) 畸胎瘤 【卵巢、 睾丸、 纵隔和骶尾部】 等;  Moles, malignant melanoma [skin, mucous membrane], (malignant) hydatidiform mole, chorionic epithelial cancer [uterine], (malignant) supporter cells, stromal cell tumor, (malignant) granulosa cell tumor [ovarian, testicular], fine Blastoma [testis], asexual cell tumor [ovary], embryonal cancer [testis, ovary], (malignant) teratoma [ovary, testis, mediastinum and palate tail], etc .;
免疫紊乱性疾病  Immune disorders
1. 细胞免疫功能缺陷可导致各种胞内寄生菌感染、 各种病毒感染, 这些 疾病包括但不限于:  1. Defects in cellular immune function can lead to various intracellular parasitic infections and various viral infections. These diseases include but are not limited to:
1 )胞内寄生菌感染: 伤寒, 副伤寒(伤寒杆菌) , 结核病 (结核杆菌) , 麻风病 (麻风杆菌) , 波导热 (布鲁氏菌) 等;  1) Intracellular parasitic infections: typhoid, paratyphoid (typhoid), tuberculosis (tuberculosis), leprosy (leprosy), wave thermal conductivity (brutella), etc .;
2)各种病毒感染性疾病: 如麻疹病毒 (麻疹, 麻疹性支气管炎, 肺炎, 中耳炎, 亚急性硬化姓全脑炎) , 疱疹病毒 (带状疱疹, 水痘) 等;  2) Various viral infectious diseases: such as measles virus (measles, measles bronchitis, pneumonia, otitis media, subacute sclerosis and panencephalitis), herpes virus (shingles, chicken pox), etc .;
3)其他, 某些真菌 (白色念珠菌) 感染等;  3) Other, certain fungal (Candida albicans) infections, etc .;
2. 体液免疫缺陷可导致各种胞外寄生菌、 各种病毒感染, 这些疾病包括 但不限于:  2. Humoral immune deficiency can cause various extracellular parasites and various viral infections. These diseases include but are not limited to:
1 ) 各种胞外寄生菌感染: : 大叶性肺炎, 中耳炎, 乳突炎, 付鼻窦炎, 脑膜炎, 败血症 (肺炎球菌) , 流行性脑脊髓膜炎 (脑膜炎球菌) , 创伤, 烧伤感染 (绿脓杆菌) 等;  1) Various extracellular parasitic infections: lobular pneumonia, otitis media, mastoiditis, sinusitis, meningitis, sepsis (pneumococcus), epidemic meningococcal (meningococcus), trauma, burns Infection (Pseudomonas aeruginosa), etc .;
2 )各种病毒感染: 脊髓灰质炎病毒 (小儿麻痹症) , 肝炎病毒 (甲, 乙, 丙, 丁, 戊, 己, 庚型肝炎) 等;  2) Various viral infections: poliovirus (poliomyelitis), hepatitis virus (A, B, C, D, E, H, G), etc .;
3)其他, 如寄生虫 (卡氏肺囊虫) 感染等;  3) Others, such as parasite (Pneumocystis carinii) infection, etc .;
3. 原发性免疫缺陷者易发生恶性肿瘤, 以白血病和淋巴系统胂瘤 (恶性 淋巴瘤 【颈部、 纵隔、 肠系膜和腹膜后淋巴结】 ) 等居多;  3. Patients with primary immunodeficiency are prone to malignant tumors, with leukemia and lymphomas (malignant lymphoma [neck, mediastinum, mesenteric and retroperitoneal lymph nodes]) being the most common;
4. 原发性免疫缺陷者易发生自身免疫病, 以 SLE、 类风湿性关节炎和恶 W 02 性贫血等较多见; 4. Primary immunodeficiency patients are prone to autoimmune diseases, such as SLE, rheumatoid arthritis and malignant disease. W 02 anemia is more common;
综合上述, 本发明的多肽以及该多肽的拮抗剂, 激动剂和抑制剂可直接用 于多种疾病的治疗, 例如胚胎发育畸形、 肿瘤、 感染、 自身免疫性疾病等。  To sum up, the polypeptide of the present invention and the antagonist, agonist and inhibitor of the polypeptide can be directly used for the treatment of various diseases, such as embryonic malformation, tumor, infection, autoimmune disease, and the like.
本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)增殖细胞 抗原 P120—51. 59 的药剂的方法。 激动剂提高增殖细胞抗原 ?120—51. 59刺激 细胞增殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各种 癌症。 例如, 能在药物的存在下, 将哺乳动物细胞或表达增殖细胞抗原 P120— 51. 59 的膜制剂与标记的增殖细胞抗原 P120—51. 59 —起培养。 然后测定药物 提高或阻遏此相互作用的能力。  The invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) the proliferating cell antigen P120-51.59. Do agonists increase proliferating cell antigens? 120-51. 59 stimulates biological functions such as cell proliferation, and antagonists prevent and treat disorders related to excessive cell proliferation, such as various cancers. For example, mammalian cells or membrane preparations expressing proliferating cell antigen P120-51.59 can be cultured with labeled proliferating cell antigen P120-51.59 in the presence of drugs. The ability of the drug to increase or block this interaction is then measured.
增殖细胞抗原 P120— 51. 59 的拮抗剂包括筛选出的抗体、 化合物、 受体缺 失物和类似物等。 增殖细胞抗原 P120— 51. 59 的拮抗剂可以与增殖细胞抗原 P120- 51. 59 结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽的活 性位点结合使该多肽不能发挥生物学功能。  Antagonists of the proliferating cell antigen P120-51.59 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of the proliferating cell antigen P120-51.59 can bind to the proliferating cell antigen P120-51.59 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot function biological functions.
在筛选作为拮抗剂的化合物时, 可以将增殖细胞抗原 P120—51. 59 加入生 物分析测定中, 通过测定化合物对增殖细胞抗原 P120~~51. 59 和其受体之间相 互作用的影响来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可 以筛选出起拮抗剂作用的受体缺失物和类似物。能与增殖细胞抗原 P120—51. 59 结合的多肽分子可通过筛选由各种可能组合的氨基酸结合于固相物组成的随机 多肽库而获得。 筛选时, 一般应对增殖细胞抗原 P120— 51. 59分子进行标记。  In screening compounds that act as antagonists, proliferating cell antigen P120-51.59 can be added to the bioanalytical assay and determined by measuring the effect of the compound on the interaction between proliferating cell antigen P120 ~~ 51.59 and its receptors. Whether the compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same way as above for screening compounds. Polypeptide molecules capable of binding to the proliferating cell antigen P120-51.59 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. During screening, the proliferating cell antigen P120-51.59 molecule should generally be labeled.
本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原 以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供 了针对增殖细胞抗原 P120—51. 59 抗原决定簇的抗体。 这些抗体包括(但不限 于): 多克隆抗体、 单克隆抗体、 嵌合抗体、 单链抗体、 Fab片段和 Fab表达文 库产生的片段。  The present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies directed against the proliferating cell antigen P120-51.59 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用增殖细胞抗原 P120—51. 59 直接注射免疫动物 (如 家兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不 限于弗氏佐剂等。 制备增殖细胞抗原 P120- 51. 59 的单克隆抗体的技术包括但 不限于杂交瘤技术(Kohler and Mi l s te in. Nature, 1975, 256: 495-497) , 三 瘤技术, 人 Β-细胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可 变 区 结 合 的 嵌 合 抗 体 可 用 已 有 的 技 术 生 产 (Morr i son et a l , PNAS, 1985, 81: 6851) 0而已有的生产单链抗体的技术(U. S. Pat No. 4946778) 也可用于生产抗增殖细胞抗原 P120— 51. 59的单链抗体。 抗增殖细胞抗原 P120—51. 59 的抗体可用于免疫组织化学技术中, 检测活 检标本中的增殖细胞抗原 P120— 51. 59。 Polyclonal antibodies can be produced by proliferating cell antigen P120-51. 59 by direct injection in immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's Adjuvant, etc. Techniques for preparing monoclonal antibodies to the proliferating cell antigen P120- 51. 59 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridization Tumor technology, EBV-hybridoma technology, etc. Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851). 0 Existing techniques for producing single-chain antibodies (US Pat No. 4946778) can also be used to produce single chain antibodies against the anti-proliferating cell antigen P120-51.59. Antibodies against proliferating cell antigen P120-51.59 can be used in immunohistochemical techniques to detect proliferating cell antigen P120-51.59 in biopsy specimens.
与增殖细胞抗原 P120— 51. 59 结合的单克隆抗体也可用放射性同位素标 记, 注入体内可跟踪其位置和分布。 这种放射性标记的抗体可作为一种非创伤 性诊断方法用于肿瘤细胞的定位和判断是否有转移。  Monoclonal antibodies that bind to proliferating cell antigen P120-51.59 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特珠部位的免疫毒素。 如增殖细胞抗原 P120- 51. 59 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋 白, 红豆碱等)共价结合。 一种通常的方法是用巯基交联剂如 SPDP , 攻击抗体 的氨基, 通过二硫键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭 增殖细胞抗原 P120— 51. 59阳性的细胞。  Antibodies can also be used to design immunotoxins against a specific bead site in the body. For example, proliferating cell antigen P120- 51. 59. High-affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP, and bind the toxin to the antibody through the disulfide exchange. This hybrid antibody can be used to kill the proliferating cell antigen P120-51.59 positive Cell.
本发明中的抗体可用于治疗或预防与增殖细胞抗原 P120—5 L 59 相关的疾 病。 给予适当剂量的抗体可以刺激或阻断增殖细胞抗原 P120— 51. 59 的产生或 活性。  The antibodies of the present invention can be used to treat or prevent diseases related to the proliferating cell antigen P120-5 L 59. The proper dose of antibody can stimulate or block the production or activity of proliferating cell antigen P120-51.59.
本发明还涉及定量和定位检测增殖细胞抗原 P120—51. 59 水平的诊断试验 方法。 这些试验是本领域所熟知的, 且包括 FISH 测定和放射免疫测定。 试验 中所检测的增殖细胞抗原 P120— 51. 59水平,可以用作解释增殖细胞抗原 P120— 51. 59 在各种疾病中的重要性和用于诊断增殖细胞抗原 Ρ120~·51. 59 起作用的 疾病。  The invention also relates to a diagnostic test method for quantitatively and locally detecting the level of the proliferating cell antigen P120-51.59. These tests are well known in the art and include FISH assays and radioimmunoassays. The level of proliferating cell antigen P120- 51. 59 detected in the test can be used to explain the importance of proliferating cell antigen P120- 51. 59 in various diseases and to diagnose proliferating cell antigen P120 ~ · 51. 59. Disease.
本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或酶进行 特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分 析。  The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis.
编码增殖细胞抗原 Ρ120—51. 59 的多核苷酸也可用于多种治疗目的。 基因 治疗技术可用于治疗由于增殖细胞抗原 Pl 20~~51. 59 的无表达或异常 /无活性 表达所致的细胞增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体)可 设计用于表达变异的增殖细胞抗原 P120— 51. 59 , 以抑制内源性的增殖细胞抗 原 Ρ120—51. 59 活性。 例如, 一种变异的增殖细胞抗原 P120— 51. 59 可以是缩 短的、 缺失了信号传导功能域的增殖细胞抗原 Ρ120~·51. 59 , 虽可与下游的底 物结合, 但缺乏信号传导活性。 因此, 重组的基因治疗载体可用于治疗增殖细 胞抗原 Pl 20—51. 59 表达或活性异常所致的疾病。 来源于病毒的表达载体如逆 转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于将编 码增殖细胞抗原 Pl 20—51. 59 的多核苷酸转移至细胞内。 构建携带编码增殖细 胞抗原 Ρ120—51. 59 的多核苷酸的重组病毒载体的方法可见于巳有文献 (Sambrook, et a l. )。 另外, 重组编码增殖细胞抗原 P120— 51. 59 的多核苷酸 可包装到脂质体中转移至细胞内。 The polynucleotide encoding the proliferating cell antigen P120-51.59 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of the proliferating cell antigen Pl 2 0 ~~ 51.59. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated proliferating cell antigen P120-51.59 to inhibit endogenous proliferating cell antigen P120-51.59 activity. For example, a variant proliferating cell antigen P120-51.59 may be a shortened proliferating cell antigen P120 ~ · 51.59 that lacks a signaling functional domain. Although it can bind to downstream substrates, it lacks signaling activity. . Therefore, the recombinant gene therapy vector can be used to treat diseases caused by abnormal expression or activity of the proliferating cell antigen Pl 2 0-51. 59. Virus-derived expression vectors such as retroviruses, adenoviruses, adenovirus-associated viruses, herpes simplex virus, parvoviruses, and the like can be used to transfer polynucleotides encoding the proliferating cell antigen Pl 2 0 to 51. 59 into cells. A method for constructing a recombinant viral vector carrying a polynucleotide encoding a proliferating cell antigen P120-51.59 can be found in the literature (Sambrook, et a l.). In addition, the recombinant polynucleotide encoding the proliferating cell antigen P120-51.59 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制增殖细胞抗原 P120— 51. 59 mRNA的寡核苷酸(包括反义 RNA和 DM)以 及核酶也在本发明的范围之内。 核酶是一种能特异性分解特定 RNA 的酶样 RNA 分子, 其作用机制是核酶分子与互补的靶 RNA特异性杂交后进行核酸内切作用。 反义的 RNA和 DNA及核酶可用已有的任何 RNA或 DNA合成技术获得, 如固相磷 酸酰胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RNA 分子可通过编码 该 MA的 DNA序列在体外或体内转录获得。 这种 DNA序列已整合到载体的 RNA 聚合酶启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修 饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非 磷酸二酯键。  Oligonucleotides (including antisense RNA and DM) and ribozymes that inhibit the proliferating cell antigen P120-51.59 are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that specifically decomposes specific RNA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation. Antisense RNA, DNA, and ribozymes can be obtained using any existing RNA or DNA synthesis technology, such as solid-phase phosphoramidite chemical synthesis to synthesize oligonucleotides. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the MA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of the nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
编码增殖细胞抗原 P120— 51. 59的多核苷酸可用于与增殖细胞抗原 P120— 51. 59 的相关疾病的诊断。 编码增殖细胞抗原 P120—51. 59 的多核苷酸可用于 检测增殖细胞抗原 P120— 51. 59 的表达与否或在疾病状态下增殖细胞抗原 P120— 51. 59 的异常表达。 如编码增殖细胞抗原 Ρ120~·51. 59 的 DNA序列可用 于对活检标本进行杂交以判断增殖细胞抗原 Ρ120—51. 59 的表达状况。 杂交技 术包括 Southern 印迹法、 Nor thern 印迹法、 原位杂交等。 这些技术方法都是 公开的成熟技术, 相关的试剂盒都可从商业途径得到。 本发明的多核苷酸的一 部分或全部可作为探针固定在微阵列(Mi croarray)或 DNA 芯片(又称为 "基因 芯片" )上, 用于分析组织中基因的差异表达分析和基因诊断。 用增殖细胞抗 原 PU 0— 51. 59特异的引物进行 RM-聚合酶链反应(RT-PCR)体外扩增也可检测 增殖细胞抗原 P120— 51. 59的转录产物。  The polynucleotide encoding the proliferating cell antigen P120-51.59 can be used for the diagnosis of diseases related to the proliferating cell antigen P120-51.59. The polynucleotide encoding the proliferating cell antigen P120-51.59 can be used to detect the expression of the proliferating cell antigen P120-51.59 or the abnormal expression of the proliferating cell antigen P120-51.59 in a disease state. For example, the DNA sequence encoding the proliferating cell antigen P120- · 51.59 can be used to hybridize biopsy specimens to determine the expression status of the proliferating cell antigen P120-51.59. Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These techniques and methods are publicly available and mature, and related kits are commercially available. A part or all of the polynucleotide of the present invention can be used as a probe to be fixed on a micro array or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in a tissue. RM-polymerase chain reaction (RT-PCR) in vitro amplification with proliferating cell antigen PU 0-51.59 specific primers can also detect the transcription product of proliferating cell antigen P120-51.59.
检测增殖细胞抗原 P120—51. 59 基因的突变也可用于诊断增殖细胞抗原 P120— 51. 59 相关的疾病。 增殖细胞抗原 P120—51. 59 突变的形式包括与正常 野生型增殖细胞抗原 Ρ120·~51. 59 DM序列相比的点突变、 易位、 缺失、 重组 和其它任何异常等。 可用已有的技术如 Southern 印迹法、 DM序列分析、 PCR 和原位杂交检测突变。 另外, 突变有可能影响蛋白的表达, 因此用 Nor thern 印迹法、 Wes tern印迹法可间接判断基因有无突变。  Detection of mutations in the proliferating cell antigen P120-51.59 gene can also be used to diagnose diseases related to the proliferating cell antigen P120-51.59. Proliferating cell antigen P120-51.59 mutations include point mutations, translocations, deletions, recombination, and any other abnormalities compared to normal wild-type proliferating cell antigens P120 · ~ 51.59 DM sequences. Mutations can be detected using existing techniques such as Southern blotting, DM sequence analysis, PCR and in situ hybridization. In addition, mutations may affect the expression of proteins. Therefore, Nor thern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置并且可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。 The sequences of the invention are also valuable for chromosome identification. This sequence will be specific to someone The chromosome is in a specific location and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for labeling chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDNA制备 PCR引物(优选 15-35bp), 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。  In short, PCR primers (preferably 15-35bp) are prepared from the cDNA, and the sequences can be located on the chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 cDNA克隆与中期染色体进行荧光原位杂交(FISH) , 可以在一个步骤中精 确地进行染色体定位。此技术的综述参见 Verma等, Human Chromosomes: a Manua l of Bas ic Techniques, Pergamon Pres s, New York (1988)。  Fluorescent in situ hybridization (FISH) of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step. For a review of this technique, see Verma et al., Human Chromosomes: a Manu l of Basic Techniques, Pergamon Pres s, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见于 V. Mckus ick, Mende l ian Inher i tance in Man (可通过与 Johns Hopkins Univers i ty Welch Medica l Library联机获 得)。 然后可通过连锁分析, 确定基因与业已定位到染色体区域上的疾病之间 的关系。  Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in V. Mckusick, Mendelian Inherance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that have been mapped to chromosomal regions.
接着, 需要测定患病和未患病个体间的 cDNA或基因组序列差异。 如果在一 些或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该突变可能是疾病的病因。 比较患病和未患病个体, 通常涉及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA, 可以是 50至 500个潜在致病基因间之一种(假定 1兆碱基作图分辨能力和每 20kb对应于一个基因)。  Next, the difference in cDNA or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
'可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  'The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。 The present invention also provides a kit or kit containing one or more containers, the containers containing one or more An ingredient of the pharmaceutical composition of the present invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which reminders authorize them to be administered to humans by government agencies that manufacture, use, or sell them. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 增殖细胞抗原 P120—51. 59 以有效地治疗和 / 或预防具体的适应症的量来给药。 施用于患者的增殖细胞抗原 P120—51. 59 的 量和剂量范围将取决于许多因素, 如给药方式、 待治疗者的健康条件和诊断医 生的判断。 实施例  The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Proliferating cell antigen P120-51. 59 is administered in an amount effective to treat and / or prevent a specific indication. The amount and range of P120-51.59 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician. Examples
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说 明本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方 法, 通常按照常规条件如 Sambrook等人, 分子克隆: 实验室手册(New York: Cold Spr ing Harbor Laboratory Pres s, 1989)中所述的条件, 或按照制造厂 商所建议的条件。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods without specific conditions in the following examples are generally performed according to the general conditions such as Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Harbor Harbor Laboratory Pres s, 1989), or according to the conditions Conditions recommended by the manufacturer.
实施例 1 增殖细胞抗原 P120— 51. 59的克隆  Example 1 Cloning of Proliferating Cell Antigen P120-51.59
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA I solat ion Ki t ( Qiegene 公司产品) 从总 RNA中分离 poly (A) mRNA0 2ug poly (A) mRNA经逆转录 形成 cDNA。用 Smart cDM克隆试剂盒(购自 Clontech ) cDNA片段定向插入到 pBSK (+) 载体 (Clontech公司产品)的多克隆位点上, 转化 DH5 α , 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequenc ing ki t (Perkin - Elmer公司产品) 和 ABI 377 自动测序仪 (Perkin-Elmer公司)测定所有克隆的 5'和 3'末端的序列。将测定的 cDNA 序列与已有的公共 DM序列数据库 (Genebank )进行比较, 结果发现其中一个克隆 1212b08的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片 段进行双向测定。结果表明, 1212b08克隆所含的全长 cDNA为 2191bp (如 Seq ID N0: 1 所示) , 从第 400bp至 1809bp有一个 Ml Obp的开放阅读框架 (0RF ) , 编码一个新 的蛋白质 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS- 1212b08 , 编码的蛋 白质命名为增殖细胞抗原 P120— 51. 59。 实施例 2 cDNA 克隆的同源检索 Total human fetal brain RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Using Quik mRNA solat I ion Ki t ( Qiegene Products) isolating poly (A) mRNA 0 2ug poly (A) mRNA from total RNA by reverse transcription form cDNA. A Smart cDM cloning kit (purchased from Clontech) was used to insert the cDNA fragment into the multicloning site of pBSK (+) vector (Clontech) to transform DH5α to form a cDNA library. The sequences at the 5 'and 3' ends of all clones were determined using a Dye terminate cycle reaction ionizing kit (Perkin-Elmer) and an ABI 377 automatic sequencer (Perkin-Elmer). The determined cDNA sequence was compared with an existing public DM sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 1212b08 was new DNA. A series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions. The results showed that the full-length cDNA contained in the 1212b08 clone was 2191bp (as shown in Seq ID N0: 1), and there was an Ml Obp open reading frame (0RF) from 400bp to 1809bp, encoding a new protein (such as Seq ID NO: 2). We named this clone pBS-1212b08, and the encoded protein was named proliferating cell antigen P120-51.59. Example 2 Homologous search of cDNA clones
将本发明的增殖细胞抗原 P120— 51. 59的序列及其编码的蛋白序列, 用 Blas t 程序 (Bas ic loca l al ignment search tool) [Al tschul, SF et al. J. Mol. Biol. 1990; 215: 403-10] , 在 Genbank、 Swi ssport等数据库进行同源检索。 与本发明的 增殖细胞抗原 ΡΠ 0— 51. 59同源性最高的基因是一种已知的增殖细胞抗原 P120, 其 编码的蛋白在 Genbank的准入号为 AJ248288。 蛋白质同源结果示于图 1, 两者高度 同源, 其相同性为 33%; 相似性为 53%。 实施例 3 用 RT-PCR方法克隆编码增殖细胞抗原 P120— 51. 59的基因 用胎脑细胞总 RNA为模板,以 ol igo-dT为引物进行逆转录反应合成 cDNA,用 Qiagene的试剂盒纯化后,用下列引物进行 PCR扩增: The sequence of the proliferating cell antigen P120-51.59 of the present invention and the protein sequence encoded by the same are used by Blas t The program (Basic loca l al ignment search tool) [Al tschul, SF et al. J. Mol. Biol. 1990; 215: 403-10] performs homology search in databases such as Genbank, Switzerland, and so on. The gene with the highest homology to the proliferating cell antigen PΠ 0-51.59 of the present invention is a known proliferating cell antigen P120, and the accession number encoded by the protein in Genbank is AJ248288. The protein homology results are shown in Figure 1. The two are highly homologous, with 33% identity; 53% similarity. Example 3 The gene encoding the proliferating cell antigen P120-51.59 was cloned by RT-PCR. The total RNA of fetal brain cells was used as a template, and oligo-dT was used as a primer to perform reverse transcription reaction to synthesize cDNA. , Using the following primers for PCR amplification:
Primerl: 5'- GGTTTTTGGAAATTGATAGAAAAG -3, (SEQ ID NO: 3)  Primerl: 5'- GGTTTTTGGAAATTGATAGAAAAG -3, (SEQ ID NO: 3)
Primer 2: 5,- CACATCAAATATTGCTAATTTATT -3' (SEQ ID NO: 4)  Primer 2: 5,-CACATCAAATATTGCTAATTTATT -3 '(SEQ ID NO: 4)
Primerl为位于 SEQ ID NO: 1的 5,端的第 lbp开始的正向序列;  Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
Pr imer2为 SEQ ID NO: 1的中的 3'端反向序列。  Pr imer2 is the 3'-end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50μ1的反应体积中含有 50mmol/L KCl, 10mmol/L Tri s-HCl pH8. 5, 1. 5mraol /L MgCl2, 200μηιο1/1 dNTP, l Opmol引物, 1U的 Taq DNA聚合酶 (Clontech公司产品)。 在 PE^OO型 DM热循环仪(Perkin - Elmer公司)上按下列条件 反应 25个周期: 94。C 30sec; 55°C 30sec; 72°C 2min。 在 RT-PCR时同时设 β -act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA 克隆试剂盒连接到 PCR载体上(Invi trogen公司产品) 。 DNA序列分析结果表明 PCR 产物的 DNA序列与 SEQ ID NO: 1所示的 l-2191bp完全相同。 实施例 4 Northern 印迹法分析增殖细胞抗原 P120— 51. 59基因的表达 用一步法提取总 RM [Anal. Biochem 1987, 162, 156-159]。 该法包括酸性硫 氰酸胍苯酚 -氯仿抽提。 即用 4M异硫氰酸胍- 25mM柠檬酸钠, 0. 2M乙酸钠 ( pH4. 0 ) 对组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49 : 1 ) , 混合 后离心。 吸出水相层, 加入异丙醇 (0. 8体积) 并将混合物离心得到 RNA沉淀。 将 得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 20μ§ RNA, 在含 20mM 3- ( N- 吗啉代) 丙磺酸(pH7. 0 ) -5raM乙酸钠 -IraM EDTA- 2, 2M甲醛的 1. 2%琼脂糖凝胶上进 行电泳。 然后转移至硝酸纤维素膜上。 用 a -32P dATP通过随机引物法制备 32Ρ-标记 的 DM探针。 所用的 DM探针为图 1所示的 PCR扩增的增殖细胞抗原 P120— 51. 59编码 区序列(400bp至 1809,bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ral ) 与转移了 RNA的 硝酸纤维素膜在一溶液中于 42。C杂交过夜, 该溶液包含 50%甲酰胺 -25mM KH2P04 ( pH7. 4 ) - 5 < 33(]-5 < 061111&1 ,3溶液和20(^8/1111鲑精0 。 杂交之后, 将滤膜在 1 x SSC-0. 1%SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 实施例 5 重组增殖细胞抗原 P120— 51. 59的体外表达、 分离和纯化 根据 SEQ ID NO: 1和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序 列如下: Amplification reaction conditions: containing 50mmol / L KCl in a reaction volume of 50 μ 1, 10mmol / L Tri s-HCl pH8 5, 1. 5mraol / L MgCl 2, 200 μ ηιο1 / 1 dNTP, l Opmol primer. 1U of Taq DNA polymerase (Clontech). The reaction was performed on a PE ^ OO DM thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min. During RT-PCR, β-act in was set as a positive control and template blank was set as a negative control. The amplified product was purified using a QIAGEN kit and ligated to a PCR vector using a TA cloning kit (Invitrogen). The DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as 1-2191bp shown in SEQ ID NO: 1. Example 4 Northern blot analysis of the expression of the proliferating cell antigen P120-51.59 gene Total RM was extracted in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue was homogenized with 4M guanidine isothiocyanate-25mM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. Using 20 μ § RNA, electrophoresis was performed on a 1.2% agarose gel containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7.0) -5raM sodium acetate-IraM EDTA-2, 2M formaldehyde. It was then transferred to a nitrocellulose membrane. A 32 P dATP was used to prepare 32 P-labeled DM probes by random primer method. The DM probe used was the PCR-amplified proliferating cell antigen P120-51.59 coding sequence (400bp to 1809, bp) shown in FIG. 1. A 32P-labeled probe (approximately 2 × 10 6 cpm / ral) and RNA-transferred nitrocellulose membrane were placed in a solution at 42 ° C. C hybridization overnight, the solution contains 50% formamide-25mM KH 2 P0 4 (pH7. 4)-5 <33 (]-5 <061111 & 1, 3 solutions and 20 (^ 8/1111 salmon sperm 0.) After hybridization, the filter was placed in 1 x SSC-0. 1% SDS at 55 ° C was washed for 30 min. Then, Phosphor Imager was used for analysis and quantification. Example 5 In Vitro Expression, Isolation and Purification of Recombinant Proliferating Cell Antigen P120-51.59 In accordance with the coding region sequence shown in SEQ ID NO: 1 and Figure 1, design A pair of specific amplification primers was generated, and the sequence is as follows:
Pr imer3: 5 '-CCCCATATGATGTCTATTTTCCCTAAGATATCT- 3 ' ( Seq ID No: 5 ) Pr imer4: 5'-CCCAAGCTTCTATGTGCTTTTGCATTTTACAAA-3' ( Seq ID No: 6 ) 此两段引物的 5'端分别含有 Ndel和 Hindll l酶切位点, 其后分别为目的基因 5' 端和 3'端的编码序列, Ndel和 Hindll l酶切位点相应于表达载体质粒 pET - 28b (+) (Novagen公司产品, Cat. No. 69865. 3)上的选择性内切酶位点。 以含有全长 目的基因的 pBS- 1212b08质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50μ1 中含 pBS-1212b08质粒 10pg、 引物 Primer - 3和 Pr imer- 4分别为 l Opmol、 Advantage polymerase Mix ( Clontech公司产品) 1μ1。 循环参数: 94。C 20s, 60。C 30s, 68°C 2 min,共 25个循环。 用 Ndel和 Hindl ll分别对扩增产物和质粒 pET- 28 (+)进行双酶切, 分别回收大片段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5 a, 在含卡那霉素 (终浓度 30μ§/ιη1 ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性 克隆, 并进行测序。 挑选序列正确的阳性克隆(PET- 1212b08 )用氯化钙法将重组 质粒转化大肠杆菌 BL21 (DE3) plySs (Novagen公司产品)。 在含卡那霉素 (终浓度 3(^g/ml ) 的 LB液体培养基中, 宿主菌 BL21 ( PET-1212b08 ) 在 37°C培养至对数生 长期, 加入 IPTG至终浓度 1隱 ol/L, 继续培养 5小时。 离心收集菌体, 经超声波破 菌,离心收集上清,用能与 6个组氨酸(6Hi s- Tag )结合的亲和层析柱 Hi s. Bind Quick Cartridge ( Novagen公司产品) 进行层析, 得到了纯化的目的蛋白增殖细胞抗原 P120— 51. 59。 经 SDS-PAGE电泳, 在 51. 59kDa处得到一单一的条带 (图 2 ) 。 将该 条带转移至 PVDF膜上用 Edams水解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨基 酸与 SEQ ID NO: 2所示的 N-端 15个氨基酸残基完全相同。 实施例 6 抗增殖细胞抗原 P120— 51. 59抗体的产生 Pr imer3: 5 '-CCCCATATGATGTCTATTTTCCCTAAGATATCT- 3' (Seq ID No: 5) Pr imer4: 5'-CCCAAGCTTCTATGTGCTTTTGCATTTTACAAA-3 '(Seq ID No: 6) These two primers contain Ndel and Hindll l digestion respectively 3, and coding sequences for the 5 'and 3' ends of the gene of interest, respectively. The Ndel and Hindll l digestion sites correspond to the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865. 3 Selective endonuclease sites on). The pBS-1212b08 plasmid containing the full-length target gene was used as a template for the PCR reaction. PCR reaction conditions were: 1 in a total volume of 50 μ plasmid pBS-1212b08 containing 10pg, primer Primer - 3 respectively, and Pr imer- 4 l Opmol, Advantage polymerase Mix (Clontech Products) 1 μ 1. Cycle parameters: 94. C 20s, 60. C 30s, 68 ° C 2 min, a total of 25 cycles. Ndel and Hindl11 were used to double-digest the amplified product and plasmid pET-28 (+), respectively, and large fragments were recovered and ligated with T4 ligase. The ligation product was transformed into E. coli DH5a by the calcium chloride method. After being cultured overnight on LB plates containing kanamycin (final concentration 30 μ § / ιη1), positive clones were selected by colony PCR method and sequenced. A positive clone (PET-1212b08) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen) using the calcium chloride method. In containing kanamycin (final concentration of 3 (^ g / ml) of LB liquid medium, host strain BL21 (P ET-1212b08) incubated at 37 ° C to logarithmic phase, IPTG was added to a final concentration of 1 implicit ol / L, continue to culture for 5 hours. Centrifuge to collect the bacteria, blast the bacteria with ultrasound, collect the supernatant by centrifugation, and use an affinity chromatography column His s. Bind Quick that can bind 6 histidines (6His-Tag). Cartridge (product of Novagen) was chromatographed to obtain purified target protein proliferating cell antigen P120-51. 59. After SDS-PAGE electrophoresis, a single band was obtained at 51.59kDa (Figure 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by the Edams hydrolysis method. As a result, the 15 amino acids at the N-terminus were completely identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2. Example 6 Anti-proliferation Production of Cell Antigen P120- 51. 59 Antibody
用多肽合成仪(PE公司产品)合成下述增殖细胞抗原 P120— 51. 59特异性的多 肽:  Polypeptide synthesizer (product of PE company) was used to synthesize the following proliferating cell antigen P120- 51. 59 specific peptides:
NH2-Met-Ser-I le-Phe-Pro-Lys-I le-Ser-Leu-Arg-Pro-Glu-Val-Glu-Asn-C00H (SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合物, 方法 参见: Avrameas, et al. Immunochemistry, 1969; 6: 43。 用 4mg上述血蓝蛋白多肽 复合物加上完全弗氏佐剂免疫家兔, 15天后再用血蓝蛋白多肽复合物加不完全弗 氏佐剂加强免疫一次。 采用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定板做 ELISA测定兔血清中抗体的滴度。 用蛋白 A-Sepharose从抗体阳性的家兔血清中分 离总 IgG。 将多肽结合于溴化氰活化的 Sephar0Se4B柱上, 用亲和层析法从总 IgG中 分离抗多肽抗体。 免疫沉淀法证明纯化的抗体可特异性地与增殖细胞抗原 P120— 51. 59结合。 实施例 7 本发明的多核苷酸片段用作杂交探针的应用 NH2-Met-Ser-I le-Phe-Pro-Lys-I le-Ser-Leu-Arg-Pro-Glu-Val-Glu-Asn-C00H (SEQ ID NO: 7). The polypeptide is coupled with hemocyanin and bovine serum albumin to form a complex, respectively. See: Avrameas, et al. Immunochemistry, 1969; 6:43. Rabbits were immunized with 4 mg of the hemocyanin polypeptide complex plus complete Freund's adjuvant, and 15 days later, the hemocyanin polypeptide complex plus incomplete Freund's adjuvant was used to boost immunity once. A titer plate coated with 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine the antibody titer in rabbit serum. Total IgG was isolated from antibody-positive rabbit serum using protein A-Sepharose. The peptide was bound to a cyanogen bromide-activated Sephar 0Se 4B column, and the anti-peptide antibody was separated from the total IgG by affinity chromatography. The immunoprecipitation method proved that the purified antibody could specifically bind to the proliferating cell antigen P120-51.59. Example 7 Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的正常组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷酸序列和检出同源的多核苷酸序列,进一步还可 用该探针检测本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。  Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected. Further, the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Northern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜步骤除 掉。 本实施例利用较高强度的洗膜条件 (如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。  The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method Acid sequence or a homologous polynucleotide sequence thereof. Filter hybridization methods include dot blotting, Southern imprinting, Northern blotting, and copying methods. They all use the same steps to immobilize the polynucleotide sample to be tested on the filter. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer to saturate the non-specific binding site of the sample on the filter with the carrier and the synthesized polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing labeled probes and incubated to hybridize the probes to the target nucleic acid. After the hybridization step, the unhybridized probes are removed by a series of membrane washing steps. This embodiment uses higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this example, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
一、 探针的选用  First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1 中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则和需要考虑的几个方面:  The selection of oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
1 , 探针大小优选范围为 18-50个核苷酸;  1. The preferred range of probe size is 18-50 nucleotides;
2, GC含量为 30%-70%, 超过则非特异性杂交增加; 3, 探针内部应无互补区域; 2. The GC content is 30% -70%, and the non-specific hybridization increases when it exceeds; 3. There should be no complementary regions inside the probe;
4, 符合以上条件的可作为初选探针, 然后进一步作计算机序列分析, 包括将 该初选探针分别与其来源序列区域 (即 SEQ ID NO: 1 )和其它巳知的基因组序列 及其互补区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超过 15 个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other unknown genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
5, 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。 完成以上各方面的分析后挑选并合成以下二个探针:  5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments. After completing the above analysis, select and synthesize the following two probes:
探针 1 (probel ), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全同源 或互补(41Nt ):  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
5'-TGTCTATTTTCCCTAAGATATCTTTGAGACCTGAGGTTGAA-3' ( SEQ ID NO: 8 ) 探针 1 (probe2), 属于第二类探针, 相当于 SEQ ID NO: 1 的基因片段或其 互补片段的替换突变序列 (懂):  5'-TGTCTATTTTCCCTAAGATATCTTTGAGACCTGAGGTTGAA-3 '(SEQ ID NO: 8) Probe 1 (probe2), which belongs to the second type of probe, is equivalent to the replacement mutation sequence of the gene fragment of SEQ ID NO: 1 or its complementary fragment (understand):
5'-TGTCTATTTTCCCTAAGATACCTTTGAGACCTGAGGTTGAA-3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DNA PROBES G. H. Kel ler; M. M. Manak; Stockton Press, 1989 (USA)以及更常 用的分子克隆实验手册书籍如 《分子克隆实验指南》( 1998年第二版) [美]萨姆布 鲁克等著, 科学出版社。  5'-TGTCTATTTTCCCTAAGATACCTTTGAGACCTGAGGTTGAA-3 '(SEQ ID NO: 9) For other commonly used reagents and their preparation methods related to the following specific experimental steps, please refer to the literature: DNA PROBES GH Kel ler; MM Manak; Stockton Press, 1989 ( USA) and more commonly used molecular cloning laboratory manual books such as "Molecular Cloning Experiment Guide" (Second Edition 1998) [US] Sambrook et al., Science Press.
样品制备:  Sample Preparation:
1, 从新鲜或冰冻组织中提取 DNA  1. Extract DNA from fresh or frozen tissue
步骤: 1 )将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 (PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 操作中应保持组织湿润。 2) 以 lOOOg离心切碎组织 10分钟。 3 )用冷匀浆缓冲液 ( 0.25mol/L蔗糖; 25mmol/L Tris-HCl,pH7.5; 25ramol/L NaCl; 25瞧 ol/L MgCl2 )悬浮沉淀(大约 lOml/g )。 4) 在 4°C 用电动匀浆器以全速匀浆组织悬液, 直至组织被完全破碎。 5) lOOOg 离心 10分钟。 6)用重悬细胞沉淀(每 O. lg最初组织样品加 1- 5ml ), 再以 lOOOg离心 10分钟。 7)用裂解缓冲液重悬沉淀 (每 0. lg最初组织样品加 ltnl ), 然后接以下 的苯酚抽提法。 Steps: 1) Place fresh or freshly thawed normal liver tissue in a plate immersed in ice and filled with phosphate buffered saline (PBS). Cut the tissue into small pieces with scissors or a scalpel. Keep tissue moist during operation. 2) Centrifuge the tissue at 1,000 g for 10 minutes. 3) Suspend the pellet (approximately 10 ml / g) with cold homogenization buffer (0.25 mol / L sucrose; 25 mmol / L Tris-HCl, pH 7.5; 25 ramol / L NaCl; 25 ol / L MgCl 2 ). 4) Homogenize the tissue suspension at 4 ° C at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (1-5 ml per 0.1 g of the initial tissue sample), and centrifuge at 1,000 g for 10 minutes. 7) Resuspend the pellet in lysis buffer (add ltnl per 0.1 g of the initial tissue sample), and then follow the phenol extraction method below.
2, DNA的苯酚抽提法  2, DNA phenol extraction method
步骤: 1 )用 1-10ml冷 PBS洗细胞, 1000g离心 10分钟。 2 )用冷细胞裂解 液重悬浮沉淀的细胞 (l x lO8细胞 /ml ) 最少应用 lOOul 裂解缓冲液。 3) 加 SDS 至终浓度为 1%, 如果在重悬细胞之前将 SDS 直接加入到细胞沉淀中, 细胞可能会 形成大的团块而难以破碎, 并降低总产率。 这一点在抽提〉107细胞时特别严重。 4) 加蛋白酶 K至终浓度 200ug/ml。 5) 50°C保温反应 1小时或在 37°C轻轻振摇过夜。 6)用等体积苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提, 在小离心机管中离心 10 ^ 钟。 两相应清楚分离, 否则重新进行离心。 7)将水相转移至新管。 8)用等体积 氯仿: 异戊醇 (24: 1)抽提, 离心 10分钟。 9)将含 DNA的水相转移至新管。 然 后进行 DM的纯化和乙醇沉淀。 Steps: 1) Wash the cells with 1-10ml cold PBS and centrifuge at 1000g for 10 minutes. 2) Resuspend the pelleted cells with cold cell lysate (lx 10 8 cells / ml). Use a minimum of 100ul lysis buffer. 3) Add SDS to a final concentration of 1%. If SDS is added directly to the cell pellet before resuspending the cells, the cells may form large clumps that are difficult to break, and reduce the overall yield. This is particularly serious when extracting> 10 7 cells. 4) Protease K was added to a final concentration of 2 00ug / ml. 5) 5 0 ° C or incubated gently shaking for 1 hour at 37 ° C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 ^ minutes. The two should be clearly separated, otherwise centrifuge again. 7) Transfer the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the DNA-containing aqueous phase to a new tube. Purification of DM and ethanol precipitation were then performed.
3, DNA的纯化和乙醇沉淀  3. Purification of DNA and ethanol precipitation
步骤: 1 )将 1/10体积 2mol/L醋酸钠和 2倍体积冷 100%乙醇加到 DNA溶液 中, 混匀。 在 -20。C放置 1小时或过夜。 2) 离心 10分钟。 3)小心吸出或倒出乙 醇。 4)用 70%冷乙醇 500ul洗涤沉淀, 离心 5分钟。 5)小心吸出或倒出乙醇。 用 500ul 冷乙醇洗涤沉淀, 离心 5分钟。 6)小心吸出或倒出乙醇, 然后在吸水纸上 倒置使残余乙醇流尽。 空气干燥 10-15 分钟, 以使表面乙醇挥发。 注意不要使沉 淀完全干燥, 否则较难重新溶解。 7) 以小体积 TE或水重悬 DNA沉淀。 低速涡旋 振荡或用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1-5χ10δ细胞所 提取的大约加 lul。 Steps: 1) Add 1/10 volume of 2mol / L sodium acetate and 2 volumes of cold 100% ethanol to the DNA solution and mix. At -20. C Let stand for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or pour out the ethanol. 4) Wash the pellet with 500ul of 70% cold ethanol and centrifuge for 5 minutes. 5) Carefully aspirate or pour out the ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol, then invert on the absorbent paper to drain off the residual ethanol. Air dry for 10-15 minutes to allow the surface ethanol to evaporate. Be careful not to allow the pellet to dry completely, otherwise it will be more difficult to re-dissolve. 7) Resuspend the DNA pellet in a small volume of TE or water. Vortex at low speed or suck with a dropper while gradually increasing TE, mix until the DNA is fully lysed, and add approximately 1 ul for each 1-5 × 10 δ cells extracted.
以下第 8-13步骤仅用于必须除去污染时, 否则可直接进行第 14步骤。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8) 将 RNA酶 A加到 DM溶液中, 终浓度为 100ug/ml , 37。C保温 30分钟。 9) 加入. SDS和蛋白酶 K, 终浓度分别为 0.5%和 100ug/ml。 37。C保温 30分钟。 10) 用等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提反应液, 离心 10 分钟。 11) 小心移出水相, 用等体积的氯仿: 异戊醇 (24: 1) 重新抽提, 离心 10分钟。 12) 小心移出水相, 加 1/10体积 2mol/L醋酸钠和 2.5体积冷乙醇, 混匀置 -20。C 1小 时。 13)用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3-6 步骤。 14) 测定 A2fi。和 A28。以检测 DM的纯度及产率。 15)分装后存放于 -20。 (。 8) Add RNase A to DM solution to a final concentration of 100ug / ml, 37. C was held for 30 minutes. 9) Add .SDS and proteinase K to final concentrations of 0.5% and 100ug / ml. 37. C was held for 30 minutes. 10) Extract the reaction solution with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the water phase, add 1/10 volume of 2mol / L sodium acetate and 2.5 volume of cold ethanol, mix well and set to -20. C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) Determine A 2fi . And A 28 . To check the purity and yield of DM. 15) Store at -20 after packing. (.
样膜的制备:  Preparation of sample film:
1)取 4x2 张适当大小的硝酸纤维素膜(NC膜), 用铅笔在其上轻轻标出 点样位置及样号, 每一探针需两张 NC膜, 以便在后面的实验步骤中分别用高强度 条件和强度条件洗膜 。  1) Take 4x2 pieces of nitrocellulose membranes (NC membranes) of appropriate size, and mark the spotting position and sample number on it with a pencil. Two NC membranes are required for each probe, so that they can be used in the following experimental steps. The film was washed with high-strength conditions and strength conditions, respectively.
2) 吸取及对照各 15微升, 点于样膜上, 在室温中晾干。  2) Pipette and control 15 microliters each, spot on the sample film, and dry at room temperature.
3 ) 置于浸润有 0. lmol/L NaOH, 1.5mol/L NaCl的滤纸上 5分钟 (两次), 晾干置于浸润有 0.5mol/L Tris-HCl (pH7.0), 3mol/L NaCl的滤纸上 5分钟 (两 次), 晾干。  3) Place on filter paper infiltrated with 0.1 mol / L NaOH, 1.5 mol / L NaCl for 5 minutes (twice), dry and put in 0.5 mol / L Tris-HCl (pH 7.0), 3 mol / L NaCl filter paper for 5 minutes (twice) and allowed to dry.
4)夹于干净滤纸中, 以铝箔包好, 60-80°C真空干燥 2小时。  4) Clamped in clean filter paper, wrapped in aluminum foil, and dried under vacuum at 60-80 ° C for 2 hours.
探针的标记  Labeling of probes
1) 3μ1 Probe ( 0. IOD/Ιθμΐ ), 加入 2μ1 Kinase缓冲液, 8-10 uCi γ-32Ρ- dATP+2U Kinase, 以补加至终体积 20μ1。 ' 2) 37 °C 保温 1小时。 1) 3μ1 Probe (0.1OD / Ιθμΐ), add 2μ1 Kinase buffer, 8-10 uCi γ- 32 P-dATP + 2U Kinase to make up to a final volume of 20μ1. ' 2) Incubate at 37 ° C for 1 hour.
3)加 1/5体积的溴酚蓝指示剂 (BPB)。  3) Add 1/5 volume of Bromophenol Blue Indicator (BPB).
4 )过 Sephadex G-50柱。  4) Pass through a Sephadex G-50 column.
5 ) 至有 32P-Probe洗出前开始收集第一峰(可用 Monitor监测)。 5) Start to collect the first peak before 32 P-Probe washes out (can be monitored by Monitor).
6) 5滴 /管, 收集 10- 15管。  6) 5 drops / tube, collect 10-15 tubes.
7)用液体闪烁仪监测同位素量。  7) Monitor the amount of isotope with a liquid scintillator.
8)合并第一峰的收集液后即为所需制备的 32P-Probe (第二峰为游离 γ- 32P - dATP )。 8) After combining the collection solutions of the first peak, the 32 P-Probe (the second peak is free γ- 32 P-dATP) is prepared.
预杂交  Pre-hybridization
将样膜置于塑料袋中,加入 3- 10mg预杂交液( 10xDenhardt>s; 6xSSC, 0. lmg/ml CT DM (小牛胸腺 DNA))。 封好袋口后, 68°C水洛摇 2小时。  The sample membrane was placed in a plastic bag, and 3 to 10 mg of prehybridization solution (10xDenhardt> s; 6xSSC, 0.1 mg / ml CT DM (calf thymus DNA)) was added. After sealing the bag, shake at 68 ° C for 2 hours.
杂交  Cross
将塑料袋剪去一角, 加入制备好的探针, 封好袋口后, 42°C水浴摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake it at 42 ° C in a water bath overnight. Wash film:
高强度洗膜:  High-intensity washing film:
1)取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1 SDS中, 40。C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1 SDS, 40. C Wash for 15 minutes (twice).
3 ) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次)。  3) Wash in 0.1xSSC, 0.1% SDS for 15 minutes at 40 ° C (twice).
4) 0. lxSSC, 0.1°/。SDS中, 55°C洗 30分钟 ( 2次), 室温晾干。 低强度洗膜:  4) 0. lxSSC, 0.1 ° /. Wash in SDS at 55 ° C for 30 minutes (twice) and dry at room temperature. Low-intensity washing film:
1)取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0.1%SDS中 , 37°C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, wash at 37 ° C for 15 minutes (twice).
3 ) 0. lxSSC, 0.1 SDS中 , 37。C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1 SDS, 37. C Wash for 15 minutes (twice).
4) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次), 室温晾干。  4) Wash in 0.1xSSC, 0.1% SDS at 40 ° C for 15 minutes (twice), and dry at room temperature.
X -光自显影: X-ray autoradiography:
-70°C, X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (pressing time depends on the radioactivity of the hybrid spot).
实验结果:  Experimental results:
采用低强度洗膜条件所进行的杂交实验, 以上两个探针杂交斑放射性强弱没 有明显区别; 而采用高强度洗膜条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显强于另一个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地分 析本发明的多核苷酸在不同组织中的存在和差异表达。  The hybridization experiments performed under low-intensity membrane washing conditions showed no significant difference in the radioactive intensity of the above two probes. However, in the hybridization experiments performed under high-intensity membrane washing conditions, the radioactive intensity of probe 1 was significantly stronger than that of hybridization spots. The radioactive intensity of the hybridization spot of the other probe. Therefore, the presence and differential expression of the polynucleotide of the present invention in different tissues can be analyzed qualitatively and quantitatively with the probe 1.

Claims

叔利要求 Uncle demand
1、 一种分离的多肽-增殖细胞抗原 P120—51. 59, 其特征在于它包含有: SEQ ID NO: 2 所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生 物。 . 1. An isolated polypeptide-proliferating cell antigen P120-51.59, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative thereof. .
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的 氨基酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。  2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如杈利要求 2 所述的多肽, 其特征在于它包含具有 SEQ ID NO: 2所示 的氨基酸序列的多肽。  3. The polypeptide according to claim 2, characterized in that it comprises a polypeptide having the amino acid sequence shown in SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一 种:  4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of:
(a)编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍 生物的多核苷酸;  (a) a polynucleotide encoding a polypeptide having an amino acid sequence shown in SEQ ID NO: 2 or a fragment, analog, or derivative thereof;
(b)与多核苷酸 (a ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to polynucleotide (a); or
(c)与 (a ) 或 (b ) 有至少 70%相同性的多核苷酸。  (c) A polynucleotide that is at least 70% identical to (a) or (b).
5、 如权利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸包含编码具 有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、 如杈利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸的序列包含 有 SEQ ID NO: 1 中 400-1809位的序列或 SEQ ID NO: 1中 1-2191位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises a sequence of positions 400-1809 in SEQ ID NO: 1 or a sequence of positions 1-2191 in SEQ ID NO: 1. sequence.
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重 组载体。  7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自 于下列一种宿主细胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
•(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (A) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用杈利要求 4-6中的任一权利要求所述多核苷酸转化或转导的宿主细 胞。  (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有增殖细胞抗原 P120—51. 59 活性的多肽的制备方法, 其特征 在于所述方法包括:  9. A method for preparing a polypeptide having proliferating cell antigen P120-51.59 activity, characterized in that the method includes:
(a) 在表达增殖细胞抗原 P12 G— 51. 59条件下, 培养杈利要求 8所述的工 程化宿主细胞;  (a) culturing the engineered host cell of claim 8 under the condition of expressing the proliferating cell antigen P12 G-51.59;
(b) 从培养物中分离出具有增殖细胞抗原 P120—51. 59活性的多肽。 (b) A polypeptide having proliferating cell antigen P120-51.59 activity is isolated from the culture.
10、 一种能与多肽结合的抗体,其特征在于所述抗体是能与增殖细胞抗原 P120-51. 59特异性结合的抗体。 10. An antibody capable of binding to a polypeptide, characterized in that the antibody is an antibody capable of specifically binding to the proliferating cell antigen P120-51.59.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制增殖细胞抗原 P120— 51. 59的活性的化合物。  11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of the proliferating cell antigen P120-51.59.
12、 如权利要求 11 所述的化合物, 其特征在于它是 SEQ ID NO: 1 所示的 多核苷酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of the polynucleotide sequence shown in SEQ ID NO: 1 or a fragment thereof.
1 3、 一种权利要求 1 1 所述化合物的应用, 其特征在于所述化合物用于调 节增殖细胞抗原?120—51. 59在体内、 体外活性的方法。  1 3. A use of the compound according to claim 11, characterized in that the compound is used for regulating proliferating cell antigen? 120-51. 59 Method of in vivo and in vitro activity.
14、 一种检测与权利要求 1-3中的任一权利要求所述多肽相关的疾病或疾 病易感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多 肽的活性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变 异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3中的任一权利要求所述多肽的应用, 其特征在于它应 用于筛选增殖细胞抗原 P120— 51. 59 的模拟物、 激动剂、 拮抗剂或抑制剂; 或 者用于肽指紋图谱鉴定。  15. Use of the polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimetics, agonists, antagonists or inhibitors of the proliferating cell antigen P120-51.59; or Identification of peptide fingerprints.
16、 如杈利要求 4-6 中的任一杈利要求所述的核酸分子的应用, 其特征在 于它作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造 基因芯片或微阵列。  16. The application of the nucleic acid molecule according to any of the claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing Gene chip or microarray.
17、 如权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化 合物的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂 或抑制剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与增殖细 胞抗原 P120— 51. 59异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with the abnormality of the proliferating cell antigen P120-51.59.
18、 权利要求 1 - 6及 11 中的任一权利要求所述的多肽、 多核苷酸或化合 物的应用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如胚胎发 育畸形、 肿瘤、 感染、 自身免疫性疾病的药物。  18. The use of a polypeptide, polynucleotide or compound according to any one of claims 1 to 6 and 11, characterized in that the polypeptide, polynucleotide or compound is used for the preparation of treatments such as embryonic developmental abnormalities, Drugs for tumors, infections, autoimmune diseases.
PCT/CN2001/001430 2000-09-18 2001-09-17 A novel-polypeptide, a proliferating cell antigen p120-51.59 and the polynucleotide encoding the polypeptide WO2002033078A1 (en)

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Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
DATABASE GENBANK [online] 10 April 1998 (1998-04-10), Database accession no. (AB011096) *
DATABASE GENBANK [online] 27 January 1998 (1998-01-27), retrieved from HSU80764 Database accession no. (U80764.1) *
DATABASE GENBANK [online] 29 May 1999 (1999-05-29), Database accession no. (AC007656) *
DATABASE GENBANK [online] 9 July 1999 (1999-07-09), Database accession no. (AF130343) *

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