WO2002026794A1 - A novel polypeptide, a human ribosomal protein l7a20.57 and the polynucleotide encoding the polypeptide - Google Patents

A novel polypeptide, a human ribosomal protein l7a20.57 and the polynucleotide encoding the polypeptide Download PDF

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Publication number
WO2002026794A1
WO2002026794A1 PCT/CN2001/001137 CN0101137W WO0226794A1 WO 2002026794 A1 WO2002026794 A1 WO 2002026794A1 CN 0101137 W CN0101137 W CN 0101137W WO 0226794 A1 WO0226794 A1 WO 0226794A1
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polypeptide
polynucleotide
ribosomal protein
human ribosomal
sequence
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PCT/CN2001/001137
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French (fr)
Chinese (zh)
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Yumin Mao
Yi Xie
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Biowindow Gene Development Inc. Shanghai
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Priority to AU2002223376A priority Critical patent/AU2002223376A1/en
Publication of WO2002026794A1 publication Critical patent/WO2002026794A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, human ribosomal protein L7a20.57, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and the polypeptide. Background technique
  • the ribosomal protein L7a is an important component of the large ribosomal subunit.
  • domain 1, domain 2, and domain 3 There are three conserved characteristic domains in the amino acid sequence of the protein, domain 1, domain 2, and domain 3.
  • Each domain contains at least one nuclear localization signal fragment (NLS), which plays an important regulatory role in the nuclear localization of the protein.
  • Domain 2 regulates the aggregation and activity of proteins and their receptors in vivo. Mutations or abnormal expression of these domains will directly affect the protein's localization and action activity in the nucleus, and then affect the normal assembly and function of the cell's inner ribosomes.
  • the ribosomal protein L7a is an important component of the ribosome subunit in the body, and is involved in regulating the composition and action activity of the ribosome subunit.
  • the mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the related protein synthesis process.
  • Modified protein is usually closely related to the developmental functions of some related tissues, such as developmental and metabolic disorders, related tumors, and cancer.
  • human ribosomal protein L7a20 The present invention is named human ribosomal protein L7a20. 57.
  • human ribosomal protein L7a20. 57 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so there has been a need in the art to identify more human ribosomal proteins L7a20 that are involved in these processes. 57 proteins, especially the amino acid sequence of this protein.
  • the isolation of the new human ribosomal protein L7a20. 57 protein encoding gene also provides a basis for the study to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic agents for disease 1 and it is therefore important to isolate its coding DNA. Disclosure of invention
  • An object of the present invention is to provide an isolated novel polypeptide-human ribosomal protein L7a20. 57 and
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human ribosomal protein L7a20.57.
  • Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human ribosomal protein L7a20.57.
  • Another object of the present invention is to provide a method for producing human ribosomal protein L7a20.57.
  • Another object of the present invention is to provide antibodies against the polypeptide of the present invention, human ribosomal protein L7a20.57.
  • Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors against the polypeptide of the present invention, human ribosomal protein L7a20.57.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal protein L7a20.57.
  • the present invention relates to an isolated polypeptide, which is of human origin and comprises: a polypeptide having the amino acid sequence of SEQ ID No. 2, or a conservative variant, biologically active fragment or derivative thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 724-1287 in SEQ ID NO: 1; and (b) having a sequence of 1-1597 in SEQ ID NO: 1 Sequence of bits.
  • the invention further relates to a vector, in particular an expression vector, containing a polynucleotide of the invention;
  • a host cell genetically engineered with the vector including a transformed, transduced or transfected host cell; a method for preparing a polypeptide of the present invention comprising culturing the host cell and recovering an expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human ribosomal protein L7a20.57 protein, which comprises utilizing the polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a method for detecting a disease or susceptibility to disease associated with abnormal expression of human ribosomal protein L7a 20.57 protein in vitro, comprising detecting a mutation in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample, or Detection of the amount or biological activity of a polypeptide of the invention in a biological sample.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the present invention also relates to other polypeptides and / or polynucleotides of the present invention prepared for the treatment of ⁇ cancer, developmental or immune disease ⁇ or other diseases of the present invention caused by abnormal expression of human ribosomal protein L7a20.57. Aspects will be apparent to those skilled in the art from the disclosure of the techniques herein.
  • Nucleic acid sequence refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RM, they can be single-stranded or double-stranded, representing the sense or antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide” or “protein” does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
  • a “variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it.
  • the changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence.
  • Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine.
  • Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
  • “Insertion” or “addition” refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement” refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • Biological activity refers to a protein that has the structure, regulation, or biochemical function of a natural molecule.
  • the term “immunologically active” refers to the ability of natural, recombinant, or synthetic proteins and fragments thereof to induce a specific immune response and to bind specific antibodies in a suitable animal or cell.
  • An "agonist” refers to a molecule that, when combined with human ribosomal protein L7a20.57, can cause the protein to change, thereby regulating the activity of the protein.
  • An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind the human ribosomal protein L7a20.57.
  • Antagonist refers to a molecule that can block or regulate the biological or immunological activity of human ribosomal protein L7a20.57 when combined with human ribosomal protein L7a20.57.
  • Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates or any other molecule that can bind to human ribosomal protein L7a20.57.
  • Regular refers to a change in the function of human ribosomal protein L7a20.57, including an increase or decrease in protein activity, a change in binding properties, and any other biological, functional, or immune properties of human ribosomal protein L7a20.57. change.
  • Those skilled in the art can purify human ribosomal protein L7a20. 57 using standard protein purification techniques. Basic The pure human ribosomal protein L7a20. 57 can generate a single main band on a non-reducing polyacrylamide gel. The purity of human ribosomal protein L7a20. 57 polypeptide can be analyzed by amino acid sequence.
  • Complementary refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence C-T-G-A
  • complementary sequence G-A-C-T.
  • the complementarity between two single-stranded molecules may be partial or complete.
  • the degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Nor thern blotting, etc.) under conditions of reduced stringency.
  • Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require that the two sequences bind to each other as either specific or selective interactions.
  • Percent identity refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Hi gg ins, DG and PM Sharp (1988) Gene 73: 237-244). The Cluster method arranges groups of sequences into clusters by checking the distance between all pairs. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: Number of residues matching between sequence A and sequence B
  • the number of residues in sequence A-the number of spacer residues in sequence A-the number of spacer residues in sequence B can also be determined by the Cluster method or using methods known in the art such as Jo tun He in. (He in J., (1990) Me thods in emzurao l ogy 183: 625-645) 0 "Similarity” refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment of amino acid sequences.
  • Amino acids used for conservative substitutions may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to a “sense strand.”
  • Derivative refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa,? 0 ⁇ ') 2 and? ⁇ It can specifically bind to the epitope of human ribosomal protein L7 a20. 57.
  • a “humanized antibody” refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring).
  • a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system.
  • Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
  • isolated human ribosomal protein L7a20. 57 means that the human ribosomal protein Ja L is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. 57. Those skilled in the art can purify human ribosomal protein L7 a20. 57 using standard protein purification techniques. Essentially pure peptide A single main band can be generated on a non-reducing polyacrylamide gel. The purity of human ribosomal protein L7a20. 57 polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a new polypeptide, human ribosomal protein L7a20.57, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the invention can be naturally purified products, or chemically synthesized products, or produced using recombinant techniques from prokaryotic or eukaryotic hosts (e.g., bacteria, yeast, higher plants, insects, and mammalian cells). Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
  • the invention also includes fragments, derivatives and analogs of the human ribosomal protein L7a20.57.
  • fragment refers to a polypeptide that substantially maintains the same biological function or activity of the human ribosomal protein L7a20.57 of the present invention.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution
  • the amino acid may or may not be encoded by a genetic codon; or ( ⁇ ) such a type in which one or more amino acid residues are substituted with other groups to include a substituent; or (III) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide (such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence)
  • such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 1597 bases in length and its open reading frame 724-1287 encodes 187 amino acids.
  • the polynucleotide of the present invention may be in the form of DNA or RNA.
  • DM forms include cDNA, genomic DNA, or synthetic DM.
  • DNA can be single-stranded or double-stranded.
  • DNA can be coding or non-coding.
  • the coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
  • polynucleotide encoding a polypeptide refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the present invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity, between the two sequences).
  • the present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions.
  • “strict conditions” means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add denaturants during hybridization, such as 50% ( ⁇ / ⁇ ) formamide, 0.1% calf serum / 0.1% F ico ll, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • a "nucleic acid fragment” contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nucleotides. Nucleotides or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques (such as PCR) to identify and / or isolate polynucleotides encoding human ribosomal protein L7a20.57.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence encoding the human ribosomal protein Ua20.57 of the present invention can be obtained by various methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DNA fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
  • genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. Isolate cDNA of interest The standard method is to isolate raRNA from donor cells that highly express the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many proven techniques for extracting mRM, and kits are also commercially available (Qiagene). And the construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua, Co. Harbor Labora tory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of the level of the human ribosomal protein L7a20.57 transcript; ( 4) Detecting gene-expressed protein products by immunological techniques or by measuring biological activity. The above methods can be used singly or in combination.
  • the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides.
  • the length of the probe is usually within 2,000 nucleotides, and preferably within 1,000 nucleotides.
  • the probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention.
  • the genes or fragments of the present invention can of course be used as probes.
  • DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the protein product of the human ribosomal protein L7a20.57 gene can be detected using immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • a method (Sa ik i, et al. Science 1985; 230: 1350-1354) using DNA technology to amplify DNA / RNA is preferably used to obtain the gene of the present invention.
  • the RACE method RACE-Rapid Amplification of cDNA Ends
  • the primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods.
  • the amplified DM / RNA fragment can be isolated and purified by conventional methods such as by gel electrophoresis.
  • polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using human ribosomal protein L7a20.57 coding sequence, and a recombinant technology to produce a polypeptide of the present invention. method.
  • a polynucleotide sequence encoding human ribosomal protein L7a20.57 can be inserted into a vector, In order to constitute a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
  • An expression vector for DNA sequences and appropriate transcriptional / translational regulatory elements include in vitro recombinant DNA technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Labora tory Manua l, cod Spring Harbor Laboratory. New York, 1989).
  • the DNA sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: E.
  • the expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells.
  • Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenovirus enhancers.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • a polynucleotide encoding human ribosomal protein L7a20.57 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to constitute a genetically engineered host cell containing the polynucleotide or the recombinant vector.
  • the term "host cell” refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell.
  • Representative examples are: Large intestine Bacillus, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as flies S2 or Sf 9; animal cells such as CH0, COS or Bowes melanoma cells.
  • Transformation of a host cell with a DNA sequence described in the present invention or a recombinant vector containing the DNA sequence can be performed using conventional techniques well known to those skilled in the art.
  • the host is a prokaryote such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl, the steps used are well known in the art. The alternative is to use MgC l 2 .
  • transformation can also be performed by electroporation.
  • the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • the polynucleotide sequence of the present invention can be used to express or produce recombinant human ribosomal protein L7 a20. 57 (Scence, 1984; 224: 1431). Generally there are the following steps:
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell.
  • recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography
  • FIG. 1 is a comparison diagram of gene chip expression profiles of human ribosomal protein L7a20.57 and human ribosomal protein L7a according to the present invention.
  • the upper graph is a graph of the expression profile of human ribosomal protein L7a20. 57, and the lower graph is the graph of the expression profile of human ribosomal protein L7a.
  • Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human ribosomal protein L7a20.57.
  • 21 kDa is the molecular weight of the protein.
  • the arrow indicates the isolated protein band.
  • Example 1 Cloning of human ribosomal protein L7a20.57
  • Total human fetal brain RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform.
  • Quik mRNA Isolat ion Kit product of Qiegene was used to isolate poly (A) raRNA 0 2ug poly (A) mRNA from reverse transcription to form cDNA.
  • the Smart cDNA cloning kit purchased from Clontech was used to insert the cDNA fragments into the multiple cloning site of pBSK (+) vector (Clontech) to transform DH5a. The bacteria formed a cDNA library.
  • Dye terminate cycle react ion sequencing kit Perkin-Elmer
  • ABI 377 automatic sequencer Perkin-Elmer
  • the determined cDNA sequence was compared with an existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0301d03 was new DNA.
  • a series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions.
  • CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
  • Pr imer l 5 '-GGCACAGTGACAGCTTCCTTTCTC -3' (SEQ ID NO: 3)
  • Pr imer2 5, — TTTCTGTCCACCTACCATTAGGTG- 3,
  • Pr imerl is the 5th, lbp terminal of SEQ ID NO: 1
  • Start forward sequence Pr iraer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
  • Conditions for the amplification reaction 50 ⁇ l of ol / L C1, 10 mmol / L of Tris-CI, (pH 8.5.5), 1.5 ⁇ l / L MgCl 2 , 200 ⁇ raol in a reaction volume of 50 ⁇ 1 / L dNTP, Opmo primer, 1U Taq DNA polymerase (Clontech).
  • the reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min.
  • ⁇ -act in was set as a positive control and template blank was set as a negative control.
  • the amplified product was purified using a QIAGEN kit, and ligated to a PCR vector using a TA cloning kit (Invitrogen).
  • the DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as that of 1-1597bp shown in SEQ ID NO: 1.
  • Example 3 Northern blot analysis of human ribosomal protein L7a20. 57 gene expression: Total RNA was extracted in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction.
  • the tissue is homogenized with 4M guanidine isothiocyanate-25mM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. With 20 U g RNA, containing 2 0mM 3- (N - morpholino) propanesulfonic acid (pH7, 0) - 5 mM sodium acetate -.
  • ImM EDTA-2 2M on a 1.2% formaldehyde agarose gel Perform electrophoresis. It was then transferred to a nitrocellulose membrane.
  • A- 32 P dATP was used to prepare 32 P-labeled DM probes by random primers.
  • the DNA probe used was the PCR amplified human ribosomal protein L7a20.57 coding region sequence (724bp to 1287bp) shown in FIG.
  • a 32P-labeled probe (about 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH7.
  • Example 4 In vitro expression, isolation and purification of recombinant human ribosomal protein L7a20. 57 According to the sequence of the coding region shown in SEQ ID NO: 1 and Figure 1, a pair of specific amplification primers were designed, the sequence is as follows:
  • Pr imer 3 5 '-CCCCATATGATGGATTATGCAGCTCAGAAGTAT -3, (Seq ID No: 5)
  • Pr imer 4 5,-CCCGAGCTCTTATGACAGAGGGCTTAACATTTC -3, (Seq ID No: 6)
  • the 5' ends of these two primers contain Mel and BamHI respectively.
  • Site, followed by the coding sequences of the 5 'and 3' ends of the gene of interest, respectively, and the Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865. 3) Selective endonuclease site.
  • the PCR reaction was performed using the pBS-0301d03 plasmid containing the full-length target gene as a template.
  • the PCR reaction conditions are as follows: a total volume of 50 ⁇ 1 containing 10 pg of pBS-0301d03 plasmid, primers? 1 "1016: 1: -3 and? 1: 111161--4 minutes!] Is 10 0101, Advantage polymerase Mix (Clontech) 1 ⁇ 1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68 ° C 2 min, 25 cycles in total.
  • Example 5 Production of anti-human ribosomal protein L7a20.57 antibody
  • the following polypeptide specific to human ribosomal protein L7a20.57 was synthesized using a peptide synthesizer (product of PE Company): NH2- Met-Asp-Tyr-Ala-Ala- Gln- Ly s-Ty r-Va 1-G 1 y-Thr-H i s-As p-Phe-Ar -COOH (SEQ ID NO: 7).
  • the polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively.
  • Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways.
  • the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected.
  • the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method.
  • Filter membrane hybridization methods include dot blotting, Southern blotting, Northern blotting, and copying methods, etc., all of which fix the polynucleotide sample to be tested on the filter The membranes were hybridized using essentially the same procedure.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer, so that the non-specific binding site of the sample on the filter is saturated with the carrier and the synthetic polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing the labeled probe and incubated to hybridize the probe to the target nucleic acid.
  • the unhybridized probes are removed by a series of membrane washing steps.
  • This embodiment utilizes higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
  • oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
  • the preferred range of probe size is 18-50 nucleotides
  • Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
  • Probe 1 which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
  • Probe 2 which belongs to the second type of probe, is equivalent to the replacement mutation sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
  • PBS phosphate buffered saline
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • NC membranes nitrocellulose membranes
  • Two NC membranes are required for each probe, so that they can be used in the following experimental steps.
  • the film was washed with high-strength conditions and strength conditions, respectively.
  • the 32 P-Probe (the second peak is free ⁇ - 32 P-dATP) is prepared.
  • High-intensity washing film 1) Take out the hybridized sample membrane.
  • Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of a large number of target gene fragments on glass, The data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information.
  • the polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases .
  • the specific method steps have been reported in the literature. For example, see DeRi si, JL, Lyer, V. & Brown, P. 0 (1997) Science 278, 680-686. And He l le, RA, Schema. , M., Cha i, A., Sha lom, D., (1997) PNAS 94: 2150-2155.
  • a total of 4,000 polynucleotide sequences of various full-length cDM are used as target DM, including the polynucleotide of the present invention. Amplify them separately by PCR, and adjust the concentration of the amplified products to At about 500ng / ul, a Cartesian 7500 spotter (purchased from Cartesian Company, USA) was used to spot on the glass medium, and the distance between the spots was 280 ⁇ m. The spotted slides were hydrated, dried, and cross-linked in a UV cross-linker. After elution, the slides were fixed to fix the DM on the glass slides to prepare chips. The specific method steps are widely reported in the literature. The post-spot processing steps of this embodiment are:
  • Total mRNA was extracted from human mixed tissues and specific tissues (or stimulated cell lines) in one step, and tnRNA was purified by Ol igotex mRNA Midi Ki t (purchased from QiaGeri).
  • the fluorescent reagent Cy3dUTP (5-Amino-propargy 1-2 ⁇ -deoxyur i dine 5'-tr iphate coupled to Cy3 f luorescent dye, purchased from Amershara Phamacia Biotech) was used to label the mRNA of human mixed tissue, and the fluorescent reagent Cy5dUTP ( 5- Amino-propargyl-2'- deoxyuridine 5'-tr ip ate coupled to Cy5 f luorescent dye, purchased from Amershara Phamacia Biotech company, labeled the body's specific tissue (or stimulated cell line) mRNA, purified and prepared to detect Please refer to the specific steps and methods:
  • Solut ion (purchased from TeleChem) was used for hybridization for 16 hours, and washed with a washing solution (lx SSC, 0.2 Jan.) at room temperature, and then scanned with a ScanArray 3000 scanner (purchased from General Scanning, USA). The scanned image For example, the data were analyzed and processed by Iraagene software (Biodiscovery, USA) to calculate the Cy3 / Cy5 ratio of each point.
  • the above specific tissues are fetal brain, bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line, thymus, normal fibroblasts 1024NC, Fibroblas t, growth factor stimulation, 1024NT, scar formation fc growth factor stimulation, 1013HT, scar into unused fc Long factor stimulation, 101 3HC, bladder cancer construct cells EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell lines, placenta, spleen, prostate cancer, jejunal adenocarcinoma, and cardia cancer. Draw a chart based on these 18 Cy3 / Cy5 ratios. (figure 1 ) . It can be seen from the figure that the expression profile of human ribosomal protein L7a20. 57 and human ribosomal protein L7a according to the present invention are very similar. Industrial applicability
  • polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
  • Ribosomal protein L7a is a new ribosomal protein, which is an important component of the ribosome subunit in the body; it is involved in regulating the composition and action of the ribosome subunit.
  • the mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the protein synthesis process related to it.
  • This protein is usually related to the developmental disorders of some related tissues and the development of disorders of protein metabolism.
  • the expression profile of the polypeptide of the present invention is consistent with the expression profile of the human ribosomal protein L7a protein, and both have similar biological functions.
  • the polypeptide of the present invention is an important component of the ribosome subunit in vivo, and is involved in regulating the composition and action activity of the ribosome subunit.
  • the mutation or abnormal expression of this protein will lead to abnormal synthesis of nuclear ribosomes, and then affect the progress of related protein synthesis processes. In turn, it leads to developmental disorders of related tissues and disorders of protein metabolism. These diseases include, but are not limited to:
  • Growth and development disorders mental retardation, cerebral palsy, brain development disorders, mental retardation, familial cerebral nucleus dysplasia syndrome, strabismus, skin, fat and muscular dysplasia such as congenital skin laxity, premature aging Dysfunction, congenital keratosis, various metabolic defects such as stunting, dwarfism, sexual retardation, etc .;
  • Disturbances in protein metabolism can affect the following major physiological functions of proteins, which can lead to the occurrence of related diseases: 1. Provide body energy; maintain tissue growth, renewal and repair:
  • 1 protein peptide hormone dysfunction can cause the following diseases:
  • Insulin and glucagon diabetes, hypoglycemia, etc .;
  • Hypothalamus and pituitary hormones giant disease, dwarfism, acromegaly, cortisol syndrome (Cushing's syndrome), primary aldosteronism, secondary chronic adrenal insufficiency, hyperthyroidism Onset, Hypothyroidism (Small disease, Juvenile hypothyroidism, Adult hypothyroidism), Male / female infertility, Menstrual disorders (functional uterine bleeding, amenorrhea, polycystic ovary syndrome, premenstrual stress syndrome) Disease, menopausal syndrome), sexual development disorder, diabetes insipidus, inappropriate antidiuretic hormone secretion syndrome, abnormal lactation, etc .;
  • parathyroid hormone hyperparathyroidism, hypoparathyroidism, etc .
  • Gastrointestinal hormones peptic ulcer, chronic indigestion, chronic gastritis, etc .;
  • hemoglobinopathy anemia, jaundice, tissue hypoxia-induced organic acidemia
  • various coagulation factor deficiency bleeding
  • muscle spasm muscle forcing
  • muscle paralysis actin
  • Ribosomal protein L7a protein is a new type of ribosomal protein. Mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the related protein synthesis process. It is known that tumor tissues can synthesize some tumor-associated proteins; such as a fetal protein (liver cancer), fetal saccharoprotein (gastric cancer), etc., ribosomal protein L7a protein. Mutation or abnormal expression of this protein will lead to abnormal synthesis of cell core glycosomes. This in turn affects the synthesis of proteins, which can produce some heterogeneous proteins, which may be related to the occurrence of some tumors.
  • the expression profile of the polypeptide of the present invention is consistent with the expression of the human ribosomal protein L7a protein, and both have similar biological functions. Mutation or abnormal expression of the polypeptide of the present invention will lead to abnormal synthesis of the core ribosomes of the cell, and then affect protein synthesis. Some heterogeneous proteins may be produced, which may be related to the occurrence of some tumors. These diseases include, but are not limited to:
  • Tumors of various tissues gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine myometrium, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Colon cancer, malignant histiocytosis, melanoma, teratoma, sarcoma, adrenal cancer, bladder cancer, bone cancer, osteosarcoma, myeloma, bone marrow cancer, brain cancer, uterine cancer, endometrial cancer, gallbladder cancer, Colon cancer, thymic tumor, nasal cavity and sinus tumor, nasopharyngeal cancer, laryngeal cancer, tracheal tumor, pleural mesothelioma, fibroid, fibrosarcoma, lipoma, liposarcoma, leiomyoma, etc .;
  • the invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human ribosomal protein L7a20.57.
  • Agonists enhance human ribosomal protein L7a20.
  • 57 stimulates biological functions such as cell proliferation, while antagonists prevent and treat disorders related to cell proliferation, such as various cancers.
  • 57 can be cultured together with labeled human ribosomal protein L7a20. 57 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
  • Antagonists of human ribosomal protein L7a20.57 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human ribosomal protein L7a20. 57 can bind to human ribosomal protein L7a20. 57 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot exert its biology Features.
  • human ribosomal protein L7a20. 57 can be added to bioanalytical assays to determine whether a compound is a compound by measuring the effect of the compound on the interaction between human ribosomal protein L7a20.57 and its receptor. Antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same way as for screening compounds described above.
  • Polypeptide molecules capable of binding to human ribosomal protein L7a20.57 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human ribosomal protein L7a20. 57 molecule should generally be labeled.
  • the present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies.
  • the invention also provides antibodies against the human ribosomal protein L7a20.57 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by injecting human ribosomal protein L7a20. 57 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's Agent. Techniques for preparing monoclonal antibodies to human ribosomal protein L7a20.57 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridization Tumor technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851).
  • the existing technology for producing single chain antibodies (U.S. Pat No. 4946778) can also be used to produce single chain antibodies against human ribosomal protein L7a20.57.
  • Antibodies against human ribosomal protein L7a20. 57 can be used in immunohistochemical techniques to detect human ribosomal protein L7a20. 57 in biopsy specimens.
  • Monoclonal antibodies bound to human ribosomal protein L7a20.57 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins that target a particular part of the body.
  • L7a20 High affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is to attack the ammonia of the antibody with a thiol crosslinker such as SPDP.
  • SPDP thiol crosslinker
  • 57 through the exchange of disulfide bonds to bind toxins to antibodies, this hybrid antibody can be used to kill human ribosomal protein L7a20.
  • the antibodies in the present invention can be used to treat or prevent diseases related to human ribosomal protein L7a20.57.
  • Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal protein L7a20.57.
  • the invention also relates to a diagnostic test method for quantitative and localized detection of human ribosomal protein L7a20.57 levels. These tests are well known in the art and include FISH assays and radioimmunoassays. The level of human ribosomal protein L7a20.57 detected in the test can be used to explain the importance of human ribosomal protein L7a20.57 in various diseases and to diagnose diseases in which human ribosomal protein L7a20.57 plays a role.
  • the polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. '
  • the polynucleotide encoding human ribosomal protein L7a20.57 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal protein L7a20.57. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human ribosomal protein L7a20.57 to inhibit endogenous human ribosomal protein L7a20.57 activity.
  • a mutated human ribosomal protein L7a20.57 may be a shortened human ribosomal protein L7a20.57, which lacks a signaling functional domain.
  • the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human ribosomal protein L7a20.57.
  • Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer the polynucleotide encoding human ribosomal protein L7a20.57 into cells.
  • Methods for constructing a recombinant viral vector carrying a polynucleotide encoding human ribosomal protein L7a20.57 can be found in the existing literature (Sambrook, et al.).
  • a recombinant polynucleotide encoding human ribosomal protein L7a20.57 can be packaged into liposomes and transferred into cells.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RNA and DNA
  • ribozymes that inhibit human ribosomal protein L7a20.57 mRNA are also within the scope of the present invention.
  • a ribozyme is an enzyme-like RNA molecule that can specifically decompose a specific RM. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation.
  • Antisense RNA, DNA, and ribozymes can be obtained by any existing RNA or DNA synthesis technology, such as the technology for the synthesis of oligonucleotides by solid-phase phosphoramidite chemical synthesis has been widely used.
  • Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DNA sequence is integrated downstream of the vector's RNA polymerase promoter. To increase the stability of nucleic acid molecules, they can be modified in a variety of ways. For example, if the sequence length on both sides is increased, the linkage between ribonucleosides should use phosphorothioate or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding human ribosomal protein L7a20. 57 can be used for the diagnosis of diseases related to human ribosomal protein L7a20. 57.
  • the polynucleotide encoding human ribosomal protein L7a20. 57 can be used to detect the expression of human ribosomal protein L7a20. 57 or the abnormal expression of human ribosomal protein L7a20. 57 in a disease state.
  • a DNA sequence encoding human ribosomal protein L7a20. 57 can be used to hybridize biopsy specimens to determine the expression status of human ribosomal protein L7a20. 57.
  • Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These techniques and methods are all mature and open technologies, and related kits are commercially available.
  • a part or all of the polynucleotides of the present invention can be used as probes to be fixed on a micro array or a DNA chip (also called a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues.
  • 57 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human ribosomal protein L7a20.
  • 57 transcripts Detection of mutations in the human ribosomal protein L7a20.
  • 57 gene can also be used to diagnose human ribosomal protein L7a20. 57-related diseases.
  • Human ribosomal protein L7a20.57 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosomal protein L7a20.57 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, the mutation may affect the expression of the protein, so the Nor thern blotting and Wes tern blotting can be used to indirectly determine whether there is a mutation in the gene.
  • the sequences of the invention are also valuable for chromosome identification.
  • the sequence specifically targets a specific position on a human chromosome and can hybridize to it.
  • specific sites for each gene on the chromosome need to be identified.
  • only a few chromosome markers based on actual sequence data are available for marking chromosome positions.
  • an important first step is to locate these DNA sequences on a chromosome.
  • a PCR primer (preferably 15-35bp) is prepared from the cDNA, and the sequence can be located on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization (FISH) of cDNA clones with metaphase chromosomes can be refined in one step Perform chromosomal mapping accurately.
  • FISH Fluorescent in situ hybridization
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendelian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that are mapped to chromosomal regions.
  • the difference in cDM or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell.
  • the polypeptides of the invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Human ribosomal protein L7a20. 57 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and range of human ribosomal protein L7a20.57 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

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Abstract

The present invention discloses a novel polypeptide, a human ribosomal protein L7a20.57, the polynucleotide encoding the polypeptide and the method for producing the polypeptide by DNA recombinant technology. The invention also discloses the uses of the polypeptide in methods for treating various diseases, such as development disturbance disease of relative tissue, protein metabolism disturbance disease, research and diagnosis and treatment of various tumour etc. The invention also discloses the agonists against the polypeptide and the therapeutic action thereof. The invention also discloses the uses of the polynucleotide encoding the novel human ribosomal protein L7a20.57.

Description

一种新的多肽——人核糖体蛋白 L7a20. 57和编码这种多肽的多核苷酸 技术领域  A new polypeptide, human ribosomal protein L7a20.57, and a polynucleotide encoding the polypeptide TECHNICAL FIELD
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽——人 核糖体蛋白 L7a20. 57 , 以及编码此多肽的多核苷酸序列。 本发明还涉及此多核 苷酸和多肽的制备方法和应用。 背景技术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, human ribosomal protein L7a20.57, and a polynucleotide sequence encoding the polypeptide. The invention also relates to a preparation method and application of the polynucleotide and the polypeptide. Background technique
人们已克隆得到了多种不同的核糖体蛋白, 并对这些蛋白在体内的作用进行了 研究。 核糖体蛋白 L7a即是核糖体大亚单位的一个重要的组成成分, 该蛋白的氨基 酸序列中存在三个保守的特征性结构域,结构域 1、 结构域 2及结构域 3。 每个结构 域均至少含有一个核定位信号片段 (NLS ), 该信号片段在蛋白的核内定位过程中起 重要的调控作用。 结构域 2 在生物体内调控着蛋白与其受体的聚集及作用活性。 这些结构域的突变或表达异常将直接影响蛋白在核内的定位及作用活性, 进而影 响细胞内核糖体的正常组装及作用。  Many different ribosomal proteins have been cloned, and the role of these proteins in the body has been studied. The ribosomal protein L7a is an important component of the large ribosomal subunit. There are three conserved characteristic domains in the amino acid sequence of the protein, domain 1, domain 2, and domain 3. Each domain contains at least one nuclear localization signal fragment (NLS), which plays an important regulatory role in the nuclear localization of the protein. Domain 2 regulates the aggregation and activity of proteins and their receptors in vivo. Mutations or abnormal expression of these domains will directly affect the protein's localization and action activity in the nucleus, and then affect the normal assembly and function of the cell's inner ribosomes.
1997 年, Giul ia 等人又从人中克隆得到了一新的核糖体蛋白 L7a 蛋白, 该蛋 白与已知的 L7a蛋白具有相似的结构及生物学功能, 其蛋白序列中亦会有三个保守 的功能性结构域, 每个结构域中含有至少一个核定位信号片段。 该蛋白在生物体 内参与核糖体大亚单位的合成过程, 其是核糖体大亚单位的重要组成成分, 该蛋 白的突变或表达异常将直接影响核内核糖体的正常组装, 进而影响与之相关的蛋 白合成过程的进行、 进而引发各种相关的代谢及发育紊乱性疾病的发生。  In 1997, Giul ia and others cloned a new ribosomal protein L7a protein from humans. This protein has similar structure and biological function to the known L7a protein. There will also be three conserved proteins in the protein sequence. Functional domains, each of which contains at least one nuclear localization signal segment. The protein is involved in the synthesis of the large ribosome subunit in the body. It is an important component of the large ribosome subunit. Mutations or abnormal expression of this protein will directly affect the normal assembly of the nuclear ribosome, and then affect it. The progress of the process of protein synthesis has led to the occurrence of various related metabolic and developmental disorders.
由上可知, 核糖体蛋白 L7a 在生物体内作为核糖体大亚单位的重要组成成 分, 参与调控核糖体大亚单位的组成及作用活性。 该蛋白的突变或表达异常将 导致细胞内核糖体的合成异常, 进而影响与之相关的蛋白合成过程的进行。 改 蛋白在生物体内通常与一些相关组织的发育及代谢紊乱性疾病、 相关组织的肿 瘤及癌症等疾病的发射功能密切相关。 通过基因芯片的分析发现, 在膀胱粘膜、 PMA+的 Ecv304细胞株、 LPS+的 Ecv304细胞株胸腺、 正常成纤维细胞 1024NC、 Fibrob l a s t , 生长因子刺激, 1024NT、 疤痕成 fc生长因子刺激, 1 013HT、 疤痕 成 f c 未用生长因子刺激, 101 3HC、 膀胱癌建株细胞 EJ、 膀胱癌旁、 膀胱癌、 肝癌、 肝癌细胞株、 胎皮、 脾脏、 前列腺癌、 空肠腺癌、 贲门癌中, 本发明的 多肽的表达谱与人核糖体蛋白 L7a 的表达谱非常近似, 因此二者功能也可能类 似。 本发明被命名为人核糖体蛋白 L7a20. 57。 由于如上所述人核糖体蛋白 L7a20. 57 蛋白在调节细胞分裂和胚胎发育等机体重要功能中起重要作用, 而且 相信这些调节过程中涉及大量的蛋白, 因而本领域中一直需要鉴定更多参与这 些过程的人核糖体蛋白 L7a20. 57 蛋白, 特别是鉴定这种蛋白的氨基酸序列。 新人核糖体蛋白 L7a20. 57 蛋白编码基因的分离也为研究确定该蛋白在健康和 疾病状态下的作用提供了基础。 这种蛋白可能构成开发疾 1 病诊断和 /或治疗 药的基础, 因此分离其编码 DNA是非常重要的。 发明的公开 It can be known from the above that the ribosomal protein L7a is an important component of the ribosome subunit in the body, and is involved in regulating the composition and action activity of the ribosome subunit. The mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the related protein synthesis process. Modified protein is usually closely related to the developmental functions of some related tissues, such as developmental and metabolic disorders, related tumors, and cancer. Gene chip analysis revealed that in the bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line thymus, normal fibroblasts 102 4 NC, Fibrob last, growth factor stimulation, 1024NT, scar-forming fc growth factor stimulation, 1 013HT , Scar into fc without stimulation with growth factor, 101 3HC, bladder cancer cell EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell line, placenta, spleen, prostate cancer, jejunum adenocarcinoma, cardia cancer The expression profile of the polypeptide of the invention is very similar to the expression profile of human ribosomal protein L7a, so the functions of the two may also be similar. 57。 The present invention is named human ribosomal protein L7a20. 57. As mentioned above human ribosomal protein L7a20. 57 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so there has been a need in the art to identify more human ribosomal proteins L7a20 that are involved in these processes. 57 proteins, especially the amino acid sequence of this protein. The isolation of the new human ribosomal protein L7a20. 57 protein encoding gene also provides a basis for the study to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic agents for disease 1 and it is therefore important to isolate its coding DNA. Disclosure of invention
本发明的一个目的是提供分离的新的多肽——人核糖体蛋白 L7a20. 57 以及
Figure imgf000003_0001
An object of the present invention is to provide an isolated novel polypeptide-human ribosomal protein L7a20. 57 and
Figure imgf000003_0001
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人核糖体蛋白 L7a20. 57 的多核苷酸的 重组载体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human ribosomal protein L7a20.57.
本发明的另一个目的是提供含有编码人核糖体蛋白 L7a20. 57 的多核苷酸的 基因工程化宿主细胞。  Another object of the present invention is to provide a genetically engineered host cell containing a polynucleotide encoding human ribosomal protein L7a20.57.
本发明的另一个目的是提供生产人核糖体蛋白 L7a20. 57的方法。  Another object of the present invention is to provide a method for producing human ribosomal protein L7a20.57.
本发明的另一个目的是提供针对本发明的多肽——人核糖体蛋白 L7a20. 57 的抗体。  Another object of the present invention is to provide antibodies against the polypeptide of the present invention, human ribosomal protein L7a20.57.
本发明的另一个目的是提供了针对本发明多肽——人核糖体蛋白 L7a20. 57 的模拟化合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors against the polypeptide of the present invention, human ribosomal protein L7a20.57.
本发明的另一个目的是提供诊断治疗与人核糖体蛋白 L7a20. 57 异常相关的 疾病的方法。  Another object of the present invention is to provide a method for diagnosing and treating diseases associated with abnormalities of human ribosomal protein L7a20.57.
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ ID No. 2 氨基酸序列的多肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多 肽是具有 SEQ ID N0: 2氨基酸序列的多肽。  The present invention relates to an isolated polypeptide, which is of human origin and comprises: a polypeptide having the amino acid sequence of SEQ ID No. 2, or a conservative variant, biologically active fragment or derivative thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或 其变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. 2氨基酸序列的多肽的多核苷酸;  (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸;  (b) a polynucleotide complementary to polynucleotide (a);
(c)与(a)或(b)的多核苷酸序列具有至少 70%相同性的多核苷酸。  (c) A polynucleotide having at least 70% identity to a polynucleotide sequence of (a) or (b).
更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 724-1287位的序列; 和(b)具有 SEQ ID NO: 1中 1-1597位的序列。  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 724-1287 in SEQ ID NO: 1; and (b) having a sequence of 1-1597 in SEQ ID NO: 1 Sequence of bits.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种 用该载体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包 括培养所述宿主细胞和回收表达产物的制备本发明多肽的方法。 The invention further relates to a vector, in particular an expression vector, containing a polynucleotide of the invention; A host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; a method for preparing a polypeptide of the present invention comprising culturing the host cell and recovering an expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。  The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制人核糖体蛋白 L7a20. 57 蛋白活性的化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用该方法 获得的化合物。  The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of human ribosomal protein L7a20.57 protein, which comprises utilizing the polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与人核糖体蛋白 L7a 20. 57 蛋白异常表达相关的 疾病或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸序列 中的突变, 或者检测生物样品中本发明多肽的量或生物活性。  The invention also relates to a method for detecting a disease or susceptibility to disease associated with abnormal expression of human ribosomal protein L7a 20.57 protein in vitro, comprising detecting a mutation in the polypeptide or a sequence encoding a polynucleotide thereof in a biological sample, or Detection of the amount or biological activity of a polypeptide of the invention in a biological sample.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗 {癌症、 发育性 疾病或免疫性疾病 }或其它由于人核糖体蛋白 L7a20. 57 表达异常所引起疾病的 本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。 本说明书和权利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以 指基因组或合成的 DNA或 RM , 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部 分。 当本发明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序 列时, 这种 "多肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质 分子相关的完整的天然氨基酸。  The present invention also relates to other polypeptides and / or polynucleotides of the present invention prepared for the treatment of {cancer, developmental or immune disease} or other diseases of the present invention caused by abnormal expression of human ribosomal protein L7a20.57. Aspects will be apparent to those skilled in the art from the disclosure of the techniques herein. The following terms used in this specification and claims have the following meanings unless specifically stated: "Nucleic acid sequence" refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RM, they can be single-stranded or double-stranded, representing the sense or antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变 的氨基酸序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸 序列中氨基酸或核苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其 中替换的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异 亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A "variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的 缺失。  "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在 的分子相比, 一个或多个氨基酸或核苷酸的增加。 "替换 " 是指由不同的氨基酸或 核苷酸替换一个或多个氨基酸或核苷酸。 "生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类似 地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的动 物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。 "Insertion" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides. "Biological activity" refers to a protein that has the structure, regulation, or biochemical function of a natural molecule. Similarly, the term "immunologically active" refers to the ability of natural, recombinant, or synthetic proteins and fragments thereof to induce a specific immune response and to bind specific antibodies in a suitable animal or cell.
"激动剂" 是指当与人核糖体蛋白 L7a20. 57结合时, 一种可引起该蛋白质 改变从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水化合 物或任何其它可结合人核糖体蛋白 L7a20. 57的分子。 An "agonist" refers to a molecule that, when combined with human ribosomal protein L7a20.57, can cause the protein to change, thereby regulating the activity of the protein. An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind the human ribosomal protein L7a20.57.
"拮抗剂" 或 "抑制物" 是指当与人核糖体蛋白 L7a20. 57结合时, 一种可 封闭或调节人核糖体蛋白 L7a20. 57的生物学活性或免疫学活性的分子。 拮抗剂 和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人核糖体蛋白 L7a20. 57的分子。  An "antagonist" or "inhibitor" refers to a molecule that can block or regulate the biological or immunological activity of human ribosomal protein L7a20.57 when combined with human ribosomal protein L7a20.57. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates or any other molecule that can bind to human ribosomal protein L7a20.57.
"调节" 是指人核糖体蛋白 L7a20. 57的功能发生改变, 包括蛋白质活性的 升高或降低、 结合特性的改变及人核糖体蛋白 L7a20. 57的任何其它生物学性 质、 功能或免疫性质的改变。  "Regulation" refers to a change in the function of human ribosomal protein L7a20.57, including an increase or decrease in protein activity, a change in binding properties, and any other biological, functional, or immune properties of human ribosomal protein L7a20.57. change.
"基本上纯1'是指基本上不含天然与其相关的其它蛋白、脂类、糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化人核糖体蛋白 L7a20. 57。 基本 上纯的人核糖体蛋白 L7a20. 57 在非还原性聚丙烯酰胺凝胶上能产生单一的主带。 人核糖体蛋白 L7a20. 57多肽的纯度可用氨基酸序列分析。 "Substantially pure 1 'means essentially free of other proteins, lipids, sugars or other substances with which it is naturally associated. Those skilled in the art can purify human ribosomal protein L7a20. 57 using standard protein purification techniques. Basic The pure human ribosomal protein L7a20. 57 can generate a single main band on a non-reducing polyacrylamide gel. The purity of human ribosomal protein L7a20. 57 polypeptide can be analyzed by amino acid sequence.
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的 多核苷酸天然结合。 例如, 序列 "C- T- G- A" 可与互补的序列 "G- A- C- T" 结合。 两个单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于 核酸链之间杂交的效率及强度有明显影响。  "Complementary" or "complementary" refers to the natural binding of polynucleotides by base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-T-G-A" can be combined with the complementary sequence "G-A-C-T". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂 交。 这种杂交的抑制可通过在严格性程度降低的条件下进行杂交 (Southern印 迹或 Nor thern印迹等) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完 全同源的序列与靶序列在的严格性程度降低的条件下的结合。 这并不意味严格 性程度降低的条件允许非特异性结合, 因为严格性程度降低的条件要求两条序 列相互的结合为特异性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Nor thern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require that the two sequences bind to each other as either specific or selective interactions.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或 相似的百分率。 可用电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. ) 。 MEGALIGN 程序可根据不同的方法如 Clus ter法比较两种或多种序列(Hi gg ins, D. G. 和 P. M. Sharp (1988) Gene 73: 237-244)。 C lus ter法通过检查所有配对之间的距 离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如序 列 A和序列 B之间的相同性百分率通过下式计算: 序列 A与序列 B之间匹配的残基个数 "Percent identity" refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Hi gg ins, DG and PM Sharp (1988) Gene 73: 237-244). The Cluster method arranges groups of sequences into clusters by checking the distance between all pairs. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: Number of residues matching between sequence A and sequence B
1 00  1 00
序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数 也可以通过 C lus ter法或用本领域周知的方法如 Jo tun He in 测定核酸序列 之间的相同性百分率(He i n J. , (1990) Me thods i n emzurao l ogy 183: 625-645) 0 "相似性" 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同或 保守性取代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括 天冬氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电荷 的头部基团有相似亲水性的氨基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸 和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。 The number of residues in sequence A-the number of spacer residues in sequence A-the number of spacer residues in sequence B can also be determined by the Cluster method or using methods known in the art such as Jo tun He in. (He in J., (1990) Me thods in emzurao l ogy 183: 625-645) 0 "Similarity" refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment of amino acid sequences. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid; positively charged amino acids may include lysine and arginine; having an uncharged head group is Similar hydrophilic amino acids may include leucine, isoleucine and valine; glycine and alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DNA或 RNA序列互补的核苷酸序列。 "反义链" 是指 与 "有义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DNA or RNA sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to a "sense strand."
"衍生物" 是指 HFP或编码其的核酸的化学修饰物。 这种化学修饰物可以是 用烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物 学特性的多肽。  "Derivative" refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives can encode polypeptides that retain the main biological properties of natural molecules.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 ?0^ ') 2及?^ 其能特异 性结合人核糖体蛋白 L7 a20. 57的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa,? 0 ^ ') 2 and? ^ It can specifically bind to the epitope of human ribosomal protein L7 a20. 57.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体更 为相似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其 天然环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物 中就是没有被分离出来, 但同样的多核苷酸或多肽同一些或全部在自然系统中 与之共存的物质分开就是分离的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是 它天然环境的成分, 它们仍然是分离的。 如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天 然的物质, 原始环境即是天然环境) 。 如活体细胞内的天然状态下的多聚核苷 酸和多肽是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存 在的其他物质中分开, 则为分离纯化的。  The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring). For example, a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system. Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated. As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
如本文所用, "分离的人核糖体蛋白 L7a20. 57 "是指人核糖体蛋白 Ja L 基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域的技术 人员能用标准的蛋白质纯化技术纯化人核糖体蛋白 L7 a20. 57。 基本上纯的多肽 在非还原聚丙烯酰胺凝胶上能产生单一的主带。 人核糖体蛋白 L7a20. 57 多肽的 纯度能用氨基酸序列分析。 As used herein, "isolated human ribosomal protein L7a20. 57" means that the human ribosomal protein Ja L is substantially free of other proteins, lipids, carbohydrates, or other substances with which it is naturally associated. 57. Those skilled in the art can purify human ribosomal protein L7 a20. 57 using standard protein purification techniques. Essentially pure peptide A single main band can be generated on a non-reducing polyacrylamide gel. The purity of human ribosomal protein L7a20. 57 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽——人核糖体蛋白 L7a20. 57 ,其基本上是由 SEQ ID NO: 2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多肽、 合成 多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学合成的产 物, 或使用重组技术从原核或真核宿主 (例如, 细菌、 酵母、 高等植物、 昆虫和哺 乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以是糖基化 的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫氨酸残基。  The present invention provides a new polypeptide, human ribosomal protein L7a20.57, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the invention can be naturally purified products, or chemically synthesized products, or produced using recombinant techniques from prokaryotic or eukaryotic hosts (e.g., bacteria, yeast, higher plants, insects, and mammalian cells). Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
本发明还包括人核糖体蛋白 L7a20. 57 的片段、 衍生物和类似物。 如本发 明所用, 术语 "片段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明的人 核糖体蛋白 L7a20. 57 相同的生物学功能或活性的多肽。 本发明多肽的片段、 衍生物或类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残基被保守 或非保守氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的氨基酸可 以是也可以不是由遗传密码子编码的; 或者 ( Π ) 这样一种, 其中一个或多个 氨基酸残基上的某个基团被其它基团取代包含取代基; 或者 ( I I I ) 这样一种, 其中成熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例如聚乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟多肽而形成的 多肽序列 (如前导序列或分泌序列或用来纯化此多肽的序列或蛋白原序列) 通 过本文的阐述, 这样的片段、 衍生物和类似物被认为在本领域技术人员的知识 范围之内。  The invention also includes fragments, derivatives and analogs of the human ribosomal protein L7a20.57. As used in the present invention, the terms "fragment", "derivative" and "analog" refer to a polypeptide that substantially maintains the same biological function or activity of the human ribosomal protein L7a20.57 of the present invention. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution The amino acid may or may not be encoded by a genetic codon; or (Π) such a type in which one or more amino acid residues are substituted with other groups to include a substituent; or (III) such A type in which a mature polypeptide is fused to another compound (such as a compound that extends the half-life of a polypeptide, such as polyethylene glycol); or (IV) a type of polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide ( Such as the leader sequence or secreted sequence or the sequence used to purify this polypeptide or protease sequence) As explained herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) , 基本由编码具有 SEQ ID NO: 2 氨 基酸序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID N0: 1 的 核苷酸序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包 含的多核苷酸序列全长为 1597个碱基, 其开放读框 724-1287编码了 187个氨 基酸。 根据基因芯片表达谱比较发现, 此多肽与人核糖体蛋白 L7a 有相似的表 达谱, 可推断出该人核糖体蛋白 L7a20. 57具有人核糖体蛋白 L7a相似的功能。  The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 1597 bases in length and its open reading frame 724-1287 encodes 187 amino acids. According to the comparison of gene chip expression profiles, it was found that this polypeptide has a similar expression profile with human ribosomal protein L7a, and it can be deduced that human ribosomal protein L7a20. 57 has similar functions to human ribosomal protein L7a.
本发明的多核苷酸可以是 DNA形式或是 RNA形式。 DM形式包括 cDNA、 基 因组 DNA或人工合成的 DM。 DNA可以是单链的或是双链的。 DNA可以是编码链 或非编码链。 编码成熟多肽的编码区序列可以与 SEQ ID N0: 1 所示的编码区序 列相同或者是简并的变异体。 如本发明所用, "简并的变异体" 在本发明中是 指编码具有 SEQ ID NO: 2 的蛋白质或多肽, 但与 SEQ ID NO: 1 所示的编码区序 列有差别的核酸序列。 编码 SEQ ID NO: 2的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附 加编码序列) 以及非编码序列。 The polynucleotide of the present invention may be in the form of DNA or RNA. DM forms include cDNA, genomic DNA, or synthetic DM. DNA can be single-stranded or double-stranded. DNA can be coding or non-coding. The coding region sequence encoding the mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant. As used in the present invention, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 but different from the coding region sequence shown in SEQ ID NO: 1 in the present invention. The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加 编码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基 酸序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天 然发生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异 体、 缺失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸 的替换形式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质 上改变其编码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至 少 50% , 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所 述多核苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: (1)在较低 离子强度和较高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1%SDS, 60 °C ;或(2)杂交 时加用变性剂, 如 50% (ν/ν)甲酰胺, 0. 1%小牛血清 / 0. l%F ico l l , 42 °C等; 或(3) 仅在两条序列之间的相同性至少在 95%以上,更好是 97%以上时才发生杂交。 并 且, 可杂交的多核苷酸编码的多肽与 SEQ ID NO: 2 所示的成熟多肽有相同的 生物学功能和活性。  The present invention also relates to a polynucleotide that hybridizes to the sequence described above (having at least 50%, preferably 70% identity, between the two sequences). The present invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the present invention under stringent conditions. In the present invention, "strict conditions" means: (1) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) Add denaturants during hybridization, such as 50% (ν / ν) formamide, 0.1% calf serum / 0.1% F ico ll, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核 酸片段"的长度至少含 10个核苷酸, 较好是至少 20-30个核苷酸, 更好是至少 50-60 个核苷酸, 最好是至少 1 00 个核苷酸以上。 核酸片段也可用于核酸的扩 增技术(如 PCR)以确定和 /或分离编码人核糖体蛋白 L7a20. 57的多核苷酸。  The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used herein, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, and most preferably at least 100 nucleotides. Nucleotides or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques (such as PCR) to identify and / or isolate polynucleotides encoding human ribosomal protein L7a20.57.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本发明的编码人核糖体蛋白 Ua20. 57的特异的多核苷酸序列能用多种方法 获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但不局限 于: 1)用探针与基因组或 cDNA 文库杂交以检出同源的多核苷酸序列, 和 2)表 达文库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence encoding the human ribosomal protein Ua20.57 of the present invention can be obtained by various methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DNA片段序列也能用下列方法获得: 1)从基因组 DNA分离双链 DNA 序列; 2)化学合成 DNA序列以获得所述多肽的双链 DNA。  The DNA fragment sequence of the present invention can also be obtained by the following methods: 1) isolating the double-stranded DNA sequence from the genomic DNA; 2) chemically synthesizing the DNA sequence to obtain the double-stranded DNA of the polypeptide.
上述提到的方法中, 分离基因组 DNA 最不常用。 DNA 序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDNA序列的分离。 分离感兴趣的 cDNA 的标准方法是从高表达该基因的供体细胞分离 raRNA并进行逆转录, 形成质粒或 噬菌体 cDNA文库。 提取 mRM 的方法已有多种成熟的技术, 试剂盒也可从商业 途径获得(Qiagene)。 而构建 cDNA 文库也是通常的方法(Sambrook, et al. , Mo lecular Cl oning, A Labora tory Manua l , Co ld Spr ing Harbor Labora tory. New York , 1989)。 还可得到商业供应的 cDNA 文库, 如 Cl ontech 公司的不同 cDNA 文库。 当结合使用聚合酶反应技术时, 即使极少的表达产物也能克隆。 Of the methods mentioned above, genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the isolation of cDNA sequences. Isolate cDNA of interest The standard method is to isolate raRNA from donor cells that highly express the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many proven techniques for extracting mRM, and kits are also commercially available (Qiagene). And the construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua, Co. Harbor Labora tory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDNA 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l) DNA-DNA或 DNA- RNA杂交; (2)标志基因功能的出现或丧失; (3)测定 人核糖体蛋白 L7a20. 57 的转录本的水平; (4)通过免疫学技术或测定生物学活 性, 来检测基因表达的蛋白产物。 上述方法可单用, 也可多种方法联合应用。  The genes of the present invention can be selected from these cDNA libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of the level of the human ribosomal protein L7a20.57 transcript; ( 4) Detecting gene-expressed protein products by immunological techniques or by measuring biological activity. The above methods can be used singly or in combination.
在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 50个核苷 酸, 最好是至少 100个核苷酸。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的为 1 000个核苷酸之内。 此处所用的探针通常是在本发明的基因序列信息 的基础上化学合成的 DNA序列。 本发明的基因本身或者片段当然可以用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。  In the method (1), the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2,000 nucleotides, and preferably within 1,000 nucleotides. The probe used here is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检测人核糖体蛋白 L7a20. 57 基因表达的蛋白产物可用 免疫学技术如 Wes tern印迹法, 放射免疫沉淀法, 酶联免疫吸附法(ELISA)等。  In the (4) method, the protein product of the human ribosomal protein L7a20.57 gene can be detected using immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
应 用 PCR 技术 扩增 DNA/RNA 的 方 法 (Sa ik i , et a l . Sc i ence 1985; 230: 1350-1354)被优选用于获得本发明的基因。 特别是很难从文库中得到 全长的 cDNA 时, 可优选使用 RACE法(RACE - cDNA末端快速扩增法), 用于 PCR 的引物可根据本文所公开的本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方法如通过凝胶电泳分离和纯化扩增的 DM/RNA片段。  A method (Sa ik i, et al. Science 1985; 230: 1350-1354) using DNA technology to amplify DNA / RNA is preferably used to obtain the gene of the present invention. In particular, when it is difficult to obtain a full-length cDNA from a library, the RACE method (RACE-Rapid Amplification of cDNA Ends) can be preferably used. The primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods. The amplified DM / RNA fragment can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DNA 片段等的多核苷酸序列可用 常规方法如双脱氧链终止法(Sanger et a l . PNAS , 1977 , 74 : 5463- 5467)测定。 这类多核苷酸序列测定也可用商业测序试剂盒等。为了获得全长的 cDNA序列, 测 序需反复进行。 有时需要测定多个克隆的 cDNA 序列, 才能拼接成全长的 cDNA 序列。  The polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接 用人核糖体蛋白 L7a20. 57编码序列经基因工程产生的宿主细胞, 以及经重组技 术产生本发明所述多肽的方法。  The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using human ribosomal protein L7a20.57 coding sequence, and a recombinant technology to produce a polypeptide of the present invention. method.
本发明中, 编码人核糖体蛋白 L7a20. 57的多核苷酸序列可插入到载体中, 以构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟知的细 菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病毒、 逆 转录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中表达的 基于 T7 启动子的表达载体(Rosenberg, et a l . Gene, 1987, 56: 125) ; 在哺乳 动物细胞中表达的 pMSXND 表达载体(Lee and Nathans , J Bio Chem. 263: 3521, 1988)和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能 在宿主体内复制和稳定, 任何质粒和载体都可以用于构建重组表达载体。 表达 载体的一个重要特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元 件。 In the present invention, a polynucleotide sequence encoding human ribosomal protein L7a20.57 can be inserted into a vector, In order to constitute a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al. Gene, 1987, 56: 125); pMSXND expression vectors expressed in mammalian cells ( Lee and Nathans, J Bio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in a host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements.
本领域的技术人员熟知的方法能用于构建含编码人核糖体蛋白 L7a20. 57 的 Methods well known to those skilled in the art can be used to construct a protein containing human ribosomal protein L7a20.57.
DNA 序列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外重组 DNA 技术、 DNA合成技术、 体内重组技术等(Sambroook, et a l . Mo lecular Cloning, a Labora tory Manua l , co l d Spr ing Harbor Laboratory. New York, 1989) 。 所述的 DNA序列可有效连接到表达载体中的适当启动子上, 以指导 mRNA合成。 这些启动子的代表性例子有: 大肠杆菌的 lac或 t rp启动子; λ噬菌体的 PL启 动子; 真核启动子包括 CMV 立即早期启动子、 HSV 胸苷激酶启动子、 早期和晚 期 SV40启动子、 反转录病毒的 LTRs 和其它一些已知的可控制基因在原核细胞 或真核细胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核糖体结 合位点和转录终止子等。 在载体中插入增强子序列将会使其在高等真核细胞中 的转录得到增强。 增强子是 DM表达的顺式作用因子, 通常大约有 1 0到 300个 碱基对, 作用于启动子以增强基因的转录。 可举的例子包括在复制起始点晚期 一侧的 100到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧的多瘤增强 子以及腺病毒增强子等。 An expression vector for DNA sequences and appropriate transcriptional / translational regulatory elements. These methods include in vitro recombinant DNA technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Labora tory Manua l, cod Spring Harbor Laboratory. New York, 1989). The DNA sequence can be operably linked to an appropriate promoter in an expression vector to guide mRNA synthesis. Representative examples of these promoters are: E. coli lac or trp promoter; Lambda phage PL promoter; eukaryotic promoters include CMV immediate early promoter, HSV thymidine kinase promoter, early and late SV40 promoters , Retroviral LTRs and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors expressed by DM, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Illustrative examples include SV40 enhancers of 100 to 270 base pairs on the late side of the origin of replication, polyoma enhancers on the late side of the origin of replication, and adenovirus enhancers.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP) , 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人核糖体蛋白 L7a20. 57的多核苷酸或含有该多核苷酸的重 组载体可转化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的基因工 程化宿主细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等真核细 胞, 如酵母细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大肠 杆菌, 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细胞; 昆虫细胞如果蝇 S2或 Sf 9 ; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等。 In the present invention, a polynucleotide encoding human ribosomal protein L7a20.57 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to constitute a genetically engineered host cell containing the polynucleotide or the recombinant vector. The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: Large intestine Bacillus, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as flies S2 or Sf 9; animal cells such as CH0, COS or Bowes melanoma cells.
用本发明所述的 DNA序列或含有所述 DNA序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaC l ^ 处理, 所用的步骤 在本领域众所周知。 可供选择的是用 MgC l 2。 如果需要, 转化也可用电穿孔的方 法进行。 当宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 Transformation of a host cell with a DNA sequence described in the present invention or a recombinant vector containing the DNA sequence can be performed using conventional techniques well known to those skilled in the art. When the host is a prokaryote such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with CaCl, the steps used are well known in the art. The alternative is to use MgC l 2 . If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产 重组的人核糖体蛋白 L7 a20. 57 (Sc i ence , 1984 ; 224 : 1431)。 一般来说有以下 步驟:  Using conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used to express or produce recombinant human ribosomal protein L7 a20. 57 (Scence, 1984; 224: 1431). Generally there are the following steps:
(1) .用本发明的编码人 人核糖体蛋白 L7a20. 57 的多核苷酸(或变异体), 或用含有该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using the polynucleotide (or variant) encoding human human ribosomal protein L7a20.57 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2) .在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
( 3) .从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 (2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。  In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 ( 3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到 细胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法分 离和纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括但 并不限于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液相层析(HPLC)和其它各种液相层析技术及这些方法的结合。 附图的简要说明  In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If desired, recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods. Brief description of the drawings
下列附图用于说明本发明的具体实施方案, 而不用于限定由杈利要求书所 界定的本发明范围。  The following drawings are used to illustrate specific embodiments of the present invention, but not to limit the scope of the present invention as defined by the claims.
图 1是本发明人核糖体蛋白 L7a20. 57和人核糖体蛋白 L7a的基因芯片表达谱比 较图。 上图是人核糖体蛋白 L7a20. 57的表达谱折方图, 下图是人核糖体蛋白 L7a的 表达谱折方图。其中, 1-胎脑、 2-膀胱粘膜、 3- PMA+的 Ecv304细胞株、 4 - LPS+的 Ecv 304 细胞株胸腺、 5 -正常成纤维细胞 1024NC、 6- Fibroblas t , 生长因子刺激, 1024NT, 7 -疤痕成 fc生长因子刺激, 1013HT、 8-疤痕成 fc未用生长因子刺激, 1013HC , 9- 膀胱癌建株细胞 EJ、 10-膀胱癌旁、 11 -膀胱癌、 12-肝癌、 13-肝癌细胞株、 14-胎 皮、 15 -脾脏、 16 -前列腺癌、 17 -空肠腺癌、 18贲门癌。 FIG. 1 is a comparison diagram of gene chip expression profiles of human ribosomal protein L7a20.57 and human ribosomal protein L7a according to the present invention. The upper graph is a graph of the expression profile of human ribosomal protein L7a20. 57, and the lower graph is the graph of the expression profile of human ribosomal protein L7a. Among them, 1-fetal brain, 2 -bladder mucosa, 3-PMA + Ecv304 cell line, 4-LPS + Ecv 304 Cell line thymus, 5-normal fibroblasts 1024NC, 6- Fibroblas t, growth factor stimulation, 1024NT, 7-scar into fc growth factor stimulation, 1013HT, 8-scar into fc without growth factor stimulation, 1013HC, 9- bladder Cancer cell line EJ, 10-bladder cancer, 11-bladder cancer, 12-liver cancer, 13-liver cancer cell line, 14-fetal skin, 15-spleen, 16-prostate cancer, 17-jejunum adenocarcinoma, 18 cardia cancer .
图 2为分离的人核糖体蛋白 L7a20. 57的聚丙烯酰胺凝胶电泳图 ( SDS-PAGE ) 。  Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human ribosomal protein L7a20.57.
21kDa为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 实施本发明的最佳方式 21 kDa is the molecular weight of the protein. The arrow indicates the isolated protein band. Best Mode for Carrying Out the Invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说 明本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方 法,通常按照常规条件如 Sambrook等人, 分子克隆:实验室手册(New York: Co l d Spr ing Harbor Laboratory Pres s , 1989)中所述的条件, 或按照制造厂商所建 议的条件。  The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods without specific conditions in the following examples are generally in accordance with conventional conditions such as those described in Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Harbor Harbor Laboratory Pres s, 1989), or Follow the conditions recommended by the manufacturer.
实施例 1 : 人核糖体蛋白 L7a20. 57的克隆  Example 1: Cloning of human ribosomal protein L7a20.57
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA Isolat ion Ki t ( Qiegene 公司产品) 从总 RNA中分离 poly (A) raRNA0 2ug poly (A) mRNA经逆转录 形成 cDNA。用 Smart cDNA克隆试剂盒(购自 Clontech )将 cDNA片段定向插入到 pBSK (+) 载体 (Clontech公司产品)的多克隆位点上, 转化 DH5 a , 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin-Elmer公司产品) 和 ABI 377自 动测序仪 (Perkin- Elmer公司)测定所有克隆的 5'和 3'末端的序列。 将测定的 cDNA序 列与已有的公共 DNA序列数据库 (Genebank ) 进行比较, 结果发现其中一个克隆 0301d03的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片段 进行双向测定。 结果表明, 0301d03克隆所含的全长 cDNA为 1597bp (如 Seq ID NO: 1 所示) , 从第 724bp至 1287bp有一个 564bp的开放阅读框架 ( 0RF ) , 编码一个新的 蛋白质 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS- 0301d03 , 编码的蛋白质 命名为人核糖体蛋白 L7a20. 57。 实施例 2: 用 RT-PCR方法克隆编码人核糖体蛋白 L7a20. 57的基因 Total human fetal brain RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Quik mRNA Isolat ion Kit (product of Qiegene) was used to isolate poly (A) raRNA 0 2ug poly (A) mRNA from reverse transcription to form cDNA. The Smart cDNA cloning kit (purchased from Clontech) was used to insert the cDNA fragments into the multiple cloning site of pBSK (+) vector (Clontech) to transform DH5a. The bacteria formed a cDNA library. Dye terminate cycle react ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the sequences at the 5 'and 3' ends of all clones. The determined cDNA sequence was compared with an existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0301d03 was new DNA. A series of primers were synthesized to determine the inserted cDNA fragments of the clone in both directions. The results showed that the full-length cDNA contained in the 0301d03 clone was 1597bp (as shown in Seq ID NO: 1), and there was a 564bp open reading frame (0RF) from 724bp to 1287bp, encoding a new protein (such as Seq ID NO : Shown in 2). We named this clone pBS-0301d03, and the encoded protein was named human ribosomal protein L7a20.57. Example 2: Cloning of a gene encoding human ribosomal protein L7a20.57 by RT-PCR
用胎脑细胞总 RNA为模板,以 ol igo- dT为引物进行逆转录反应合成 cDNA,用 Qiagene的试剂盒纯化后,用下列引物进行 PCR扩增:  CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
Pr imer l: 5 '- GGCACAGTGACAGCTTCCTTTCTC -3' (SEQ ID NO: 3) Pr imer2: 5,— TTTCTGTCCACCTACCATTAGGTG- 3, (SEQ ID NO: 4) Pr imerl为位于 SEQ ID NO: 1 的 5,端的第 lbp开始的正向序列; Pr iraer2为 SEQ ID NO: 1的中的 3'端反向序列。 Pr imer l: 5 '-GGCACAGTGACAGCTTCCTTTCTC -3' (SEQ ID NO: 3) Pr imer2: 5, — TTTCTGTCCACCTACCATTAGGTG- 3, (SEQ ID NO: 4) Pr imerl is the 5th, lbp terminal of SEQ ID NO: 1 Start forward sequence Pr iraer2 is the 3 'end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50 μ 1的反应体积中含有 50匪 ol/L C1, 10mmol/L Tr i s- CI , (pH8. 5) , 1· 5瞧 ol /L MgCl2, 200 μ raol /L dNTP, l Opmo l引物, 1U的 Taq DNA聚合酶 (Clontech公司产品)。 在 PE9600型 DNA热循环仪(Perkin- Elmer公司)上按下列条件 反应 25个周期: 94。C 30sec; 55°C 30sec; 72°C 2min。 在 RT-PCR时同时设 β -act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA克 隆试剂盒连接到 PCR载体上 (Invi trogen公司产品) 。 DNA序列分析结果表明 PCR产 物的 DNA序列与 SEQ ID NO: 1所示的 1- 1597bp完全相同。 实施例 3: Northern 印迹法 分析人核糖体蛋白 L7a20. 57基因的表达: 用一步法提取总 RNA [Anal. Biochem 1987, 162, 156-159]。 该法包括酸性硫氰酸胍苯酚 -氯仿抽提。 即用 4M异硫氰酸胍- 25mM柠 檬酸钠, 0. 2M乙酸钠 (pH4. 0 ) 对组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的 氯仿-异戊醇 (49 : 1 ) , 混合后离心。 吸出水相层, 加入异丙醇 (0. 8体积) 并将 混合物离心得到 RNA沉淀。 将得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 20 U g RNA , 在含 20mM 3- ( N -吗啉代) 丙磺酸 ( pH7, 0 ) - 5mM乙酸钠 - ImM EDTA-2. 2M 甲醛的 1. 2%琼脂糖凝胶上进行电泳。 然后转移至硝酸纤维素膜上。 用 a - 32P dATP 通过随机引物法制备 32P-标记的 DM探针。 所用的 DNA探针为图 1所示的 PCR扩增的人 核糖体蛋白 L7a20. 57编码区序列(724bp至 1287bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ml )与转移了 RNA的硝酸纤维素膜在一溶液中于 42°C杂交过夜,该溶液包含 50% 甲酰胺 - 25mM KH2P04 ( pH7. 4 ) - 5 χ SSC- 5 χ Denhardt' s溶液和 200 μ g/ml鲑精 DNA。 杂交之后, 将滤膜在 1 x SSC-0. 1%SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager 进行分析和定量。 Conditions for the amplification reaction: 50 μl of ol / L C1, 10 mmol / L of Tris-CI, (pH 8.5.5), 1.5 μl / L MgCl 2 , 200 μ raol in a reaction volume of 50 μ 1 / L dNTP, Opmo primer, 1U Taq DNA polymerase (Clontech). The reaction was performed on a PE9600 DNA thermal cycler (Perkin-Elmer) for 25 cycles under the following conditions: 94. C 30sec; 55 ° C 30sec; 72 ° C 2min. During RT-PCR, β-act in was set as a positive control and template blank was set as a negative control. The amplified product was purified using a QIAGEN kit, and ligated to a PCR vector using a TA cloning kit (Invitrogen). The DNA sequence analysis results showed that the DNA sequence of the PCR product was exactly the same as that of 1-1597bp shown in SEQ ID NO: 1. Example 3: Northern blot analysis of human ribosomal protein L7a20. 57 gene expression: Total RNA was extracted in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction. That is, the tissue is homogenized with 4M guanidine isothiocyanate-25mM sodium citrate, 0.2M sodium acetate (pH4.0), and 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1), centrifuge after mixing. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. With 20 U g RNA, containing 2 0mM 3- (N - morpholino) propanesulfonic acid (pH7, 0) - 5 mM sodium acetate -. ImM EDTA-2 2M on a 1.2% formaldehyde agarose gel Perform electrophoresis. It was then transferred to a nitrocellulose membrane. A- 32 P dATP was used to prepare 32 P-labeled DM probes by random primers. The DNA probe used was the PCR amplified human ribosomal protein L7a20.57 coding region sequence (724bp to 1287bp) shown in FIG. A 32P-labeled probe (about 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH7. 4)-5 χ SSC- 5 χ Denhardt's solution and 200 μg / ml salmon sperm DNA. After hybridization, the filter was washed in 1 x SSC-0. 1% SDS at 55 ° C for 30 min. Phosphor Imager was then used for analysis and quantification.
实施例 4: 重组人核糖体蛋白 L7a20. 57的体外表达、分离和纯化根据 SEQ ID NO: 1 和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序列如下:  Example 4: In vitro expression, isolation and purification of recombinant human ribosomal protein L7a20. 57 According to the sequence of the coding region shown in SEQ ID NO: 1 and Figure 1, a pair of specific amplification primers were designed, the sequence is as follows:
Pr imer 3: 5 '- CCCCATATGATGGATTATGCAGCTCAGAAGTAT -3, ( Seq ID No: 5 ) Pr imer4: 5,- CCCGAGCTCTTATGACAGAGGGCTTAACATTTC -3, ( Seq ID No: 6 ) 此两 段引物的 5'端分别含有 Mel和 BamHI酶切位点, 其后分别为目的基因 5'端和 3'端的编 码序列, Ndel和 BamHI酶切位点相应于表达载体质粒 pET-28b (+) (Novagen公司产品, Cat. No. 69865. 3)上的选择性内切酶位点。 以含有全长目的基因的 pBS-0301d03质粒 为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50 μ 1中含 pBS- 0301d03质粒 10pg、 引物?1" 1016:1:-3和?1:111161--4分另!]为10 0101、 Advantage polymerase Mix ( Clontech公 司产品) 1 μ 1。 循环参数: 94°C 20s, 60°C 30s, 68°C 2 min,共 25个循环。 用 Ndel 和 BamHI分别对扩增产物和质粒 pET- 28 (+)进行双酶切,分别回收大片段,并用 T4连接 酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5a,在含卡那霉素 (终浓度 30 μ g/ral ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行测序。 挑选序 列正确的阳性克隆 ( pET- 0301d03 ) 用氯化钙法将重组质粒转化大肠杆菌 BL21(DE3)plySs(Novageri公司产品)。 在含卡那霉素 (终浓度 30 g/ml ) 的 LB液体 培养基中, 宿主菌 BL21 (PET-0301d03 )在 37。C培养至对数生长期, 加入 IPTG至终 浓度 lmmol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用 能与 6个组氨酸 (6His- Tag)结合的亲和层析柱 His. Bind Quick Cartridge ( Novagen 公司产品)进行层析, 得到了纯化的目的蛋白人核糖体蛋白 L7a20.57。 经 SDS-PAGE 电泳, 在 lOkDa处得到一单一的条带 (图 2 ) 。 将该条带转移至 PVDF膜上用 Edams水 解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨基酸与 SEQ ID NO: 2所示的 N-端 15 个氨基酸残基完全相同。 实施例 5 抗人核糖体蛋白 L7a20.57抗体的产生用多肽合成仪 ( PE公司产品)合 成下述人核糖体蛋白 L7a20.57 特异性的多肽: NH2- Met-Asp-Tyr-Ala-Ala-Gln- Ly s-Ty r-Va 1-G 1 y-Thr-H i s-As p-Phe-Ar -COOH (SEQ ID NO: 7)。 将该多肽分别与血 蓝蛋白和牛血清白蛋白耦合形成复合, 方法参见: Avraraeas,et al. Immimochemistry, 1969; 6: 43。 用 4mg上述血蓝蛋白多肽复合物加上完全弗氏佐剂 免疫家兔, 15 天后再用血蓝蛋白多肽复合物加不完全弗氏佐剂加强免疫一次。 采 用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定板做 ELISA测定兔血清中抗体 的滴度。 用蛋白 A- Sepharose 从抗体阳性的家兔血清中分离总 IgG。 将多肽结合 于漠化氰活化的 Sepharose4B柱上, 用亲和层析法从总 IgG 中分离抗多肽抗体。 免疫沉淀法证明纯化的抗体可特异性地与人核糖体蛋白 L7a20.57结合。 实施例 6: 本发明的多核苷酸片段用作杂交探针的应用 Pr imer 3: 5 '-CCCCATATGATGGATTATGCAGCTCAGAAGTAT -3, (Seq ID No: 5) Pr imer 4: 5,-CCCGAGCTCTTATGACAGAGGGCTTAACATTTC -3, (Seq ID No: 6) The 5' ends of these two primers contain Mel and BamHI respectively. Site, followed by the coding sequences of the 5 'and 3' ends of the gene of interest, respectively, and the Ndel and BamHI restriction sites correspond to the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865. 3) Selective endonuclease site. The PCR reaction was performed using the pBS-0301d03 plasmid containing the full-length target gene as a template. The PCR reaction conditions are as follows: a total volume of 50 μ 1 containing 10 pg of pBS-0301d03 plasmid, primers? 1 "1016: 1: -3 and? 1: 111161--4 minutes!] Is 10 0101, Advantage polymerase Mix (Clontech) 1 μ 1. Cycle parameters: 94 ° C 20s, 60 ° C 30s, 68 ° C 2 min, 25 cycles in total. Digestion of the amplified product and plasmid pET-28 (+) with Ndel and BamHI, respectively, to recover large fragments and ligate with T4 Enzyme linked. The ligation product was transformed into E. coli DH5a by the calcium chloride method. After being cultured overnight on LB plates containing kanamycin (final concentration 30 μg / ral), positive clones were selected by colony PCR method and sequenced. A positive clone (pET-0301d03) with the correct sequence was selected, and the recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novageri) by the calcium chloride method. In containing kanamycin (final concentration 30 g / ml) of LB liquid medium, host strain BL21 (P ET-0301d03) at 37. C. Cultivate to logarithmic growth phase, add IPTG to a final concentration of 1 mmol / L, and continue to cultivate for 5 hours. The bacteria were collected by centrifugation, and the supernatant was collected by centrifugation. The supernatant was collected by centrifugation. The affinity chromatography column His. Bind Quick Cartridge (product of Novagen) was used to obtain 6 histidines (6His-Tag). The purified human ribosomal protein L7a20.57 was obtained. After SDS-PAGE electrophoresis, a single band was obtained at 10 kDa (Figure 2). The band was transferred to a PVDF membrane and the N-terminal amino acid sequence was analyzed by Edams hydrolysis method. As a result, the 15 amino acids at the N-terminus were identical to the 15 amino acid residues at the N-terminus shown in SEQ ID NO: 2. Example 5 Production of anti-human ribosomal protein L7a20.57 antibody The following polypeptide specific to human ribosomal protein L7a20.57 was synthesized using a peptide synthesizer (product of PE Company): NH2- Met-Asp-Tyr-Ala-Ala- Gln- Ly s-Ty r-Va 1-G 1 y-Thr-H i s-As p-Phe-Ar -COOH (SEQ ID NO: 7). The polypeptide is coupled to hemocyanin and bovine serum albumin to form a complex, respectively. For the method, see: Avraraeas, et al. Immimochemistry, 1969; 6: 43. Rabbits were immunized with 4 mg of the hemocyanin polypeptide complex and complete Freund's adjuvant, and 15 days later, the hemocyanin polypeptide complex and incomplete Freund's adjuvant were used to boost immunity once. A titer plate coated with a 15 g / ml bovine serum albumin peptide complex was used as an ELISA to determine antibody titers in rabbit serum. Protein A-Sepharose was used to isolate total IgG from antibody-positive rabbit sera. The peptide was bound to a desertified cyanide-activated Sepharose4B column, and the anti-peptide antibody was separated from the total IgG by affinity chromatography. The immunoprecipitation method proved that the purified antibody could specifically bind to human ribosomal protein L7a20.57. Example 6: Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的正常组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷酸序列和检出同源的多核苷酸序列,进一步还可 用该探针检测本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。  Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected. Further, the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Northern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜步骤除 掉。 本实施例利用较高强度的洗膜条件(如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。 The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method. Acid sequence or a homologous polynucleotide sequence thereof. Filter membrane hybridization methods include dot blotting, Southern blotting, Northern blotting, and copying methods, etc., all of which fix the polynucleotide sample to be tested on the filter The membranes were hybridized using essentially the same procedure. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer, so that the non-specific binding site of the sample on the filter is saturated with the carrier and the synthetic polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing the labeled probe and incubated to hybridize the probe to the target nucleic acid. After the hybridization step, the unhybridized probes are removed by a series of membrane washing steps. This embodiment utilizes higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this embodiment, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained.
一、 探针的选用 First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1 中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则和需要考虑的几个方面:  The selection of oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
1 , 探针大小优选范围为 18-50个核苷酸; 1. The preferred range of probe size is 18-50 nucleotides;
2 , GC含量为 30%-70%, 超过则非特异性杂交增加; 2.GC content is 30% -70%, non-specific hybridization increases when it exceeds;
3 , 探针内部应无互补区域;  3, there should be no complementary regions inside the probe;
4 , 符合以上条件的可作为初选探针, 然后进一步作计算机序列分析, 包括将该 初选探针分别与其来源序列区域 (即 SEQ ID NO: 1 )和其它已知的基因组序列 及其互补区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超过 15个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
5 , 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。  5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments.
完成以上各方面的分析后挑选并合成以下二个探针:  After completing the above analysis, select and synthesize the following two probes:
探针 1 ( probel ), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全 同源或互补 ( 41Nt ):  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
5'- TGGATTATGCAGCTCAGAAGTATGTTGGCACCCATGATTTC-3' ( SEQ ID NO: 8 ) 探针 2 ( probe2 ) , 属于第二类探针, 相当于 SEQ ID NO: 1的基因片段或其互补 片段的替换突变序列 (41Nt ) :  5'- TGGATTATGCAGCTCAGAAGTATGTTGGCACCCATGATTTC-3 '(SEQ ID NO: 8) Probe 2 (probe2), which belongs to the second type of probe, is equivalent to the replacement mutation sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
5 '- TGGATTATGCAGCTCAGAAGCATGTTGGCACCCATGATTTC-3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DM PROBES G. Η· Kel ler; M. Μ· Manak; S tockton Pres s, 1989 (USA)以及更常用 的分子克隆实验手册书籍如 《分子克隆实验指南》( 1998 年第二版) [美]萨姆布 鲁克等著, 科学出版社。 样品制备: 5 '-TGGATTATGCAGCTCAGAAGCATGTTGGCACCCATGATTTC-3' (SEQ ID NO: 9) For other commonly used reagents and their preparation methods not listed in the following specific experimental steps, please refer to the literature: DM PROBES G. Η · Kel ler; M. Μ · Manak Stockton Pres s, 1989 (USA) and more commonly used molecular cloning laboratory manuals such as "Molecular Cloning Experiment Guide" (Second Edition 1998) [US] Sambrook et al., Science Press. Sample Preparation:
1, 从新鲜或冰冻组织中提取 DNA  1. Extract DNA from fresh or frozen tissue
步骤: 1) 将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 (PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 操作中应保持组织湿润。 2) 以 lOOOg离心切碎组织 10分钟。 3 )用冷匀浆缓冲液 ( 0.25raol/L蔗糖; 25mraol/L Tris-HCl,pH7.5; 25mmol/LnaCl; 25mmol/L MgCl2 ) 悬浮沉淀(大约 10ml/g)。 4 ) 在 4°C用电动匀浆器以全速匀浆组织悬液, 直至组织被完全破碎。 5) lOOOg 离心 10分钟。 6)用重悬细胞沉淀 (每 O. lg最初组织样品加 1- 5ml), 再以 lOOOg离心 10分钟。 7)用裂解缓冲液重悬沉淀(每 O.lg最初组织样品加 lffll), 然后接以下 Procedure: 1) Place fresh or freshly thawed normal liver tissue in a plate immersed in ice and filled with phosphate buffered saline (PBS). Cut the tissue into small pieces with scissors or a scalpel. Keep tissue moist during operation. 2) Centrifuge the tissue at 1,000 g for 10 minutes. 3) cold homogenization buffer (0.25raol / L sucrose; 25mraol / L Tris-HCl, pH7.5; 25mmol / LnaCl; 25mmol / L MgCl 2) was suspended precipitate (approximately 10ml / g). 4) Homogenize the tissue suspension at 4 ° C at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (1 to 5 ml per 0.1 g of the original tissue sample), and centrifuge at 1,000 g for 10 minutes. 7) Resuspend the pellet with lysis buffer (add lffll per 0.1 g of the initial tissue sample), and then connect the following
2, DNA的苯酚抽提法 2, DNA phenol extraction method
步骤: 1 )用 1- 10ml冷 PBS洗细胞, lOOOg离心 10分钟。 2 )用冷细胞裂解液 重悬浮沉淀的细胞 (l xlO8细胞 /ml)最少应用 lOOul 裂解缓冲液。 3)加 SDS 至 终浓度为 1%, 如果在重悬细胞之前将 SDS直接加入到细胞沉淀中, 细胞可能会形 成大的团块而难以破碎, 并降低的总产率。 这一点在抽提〉107细胞时特别严重。 4) 加蛋白酶 K至终浓度 200ug/ral。 5) 50°C保温反应 1小时或在 37°C轻轻振摇过夜。 6)用等体积苯酚: 氯仿: 异戊醇( 25: 24: 1)抽提, 在小离心机管中离心 10分 钟。 两相应清楚分离, 否则重新进行离心。 7) 将水相转移至新管。 8)用等体积 氯仿: 异戊醇 (24: 1)抽提, 离心 10分钟。 9) 将含 DNA的水相转移至新管。 然 后进行 DM的纯化和乙醇沉淀。 Steps: 1) Wash the cells with 1-10 ml of cold PBS and centrifuge at 1,000 g for 10 minutes. 2) Resuspend the pelleted cells (1 x 10 8 cells / ml) with cold cell lysate and apply a minimum of 100 ul lysis buffer. 3) Add SDS to a final concentration of 1%. If SDS is directly added to the cell pellet before resuspending the cells, the cells may form large clumps that are difficult to break, and reduce the overall yield. This is particularly serious when extracting> 10 7 cells. 4) Add proteinase K to a final concentration of 200ug / ral. 5) Incubate at 50 ° C for 1 hour or shake gently at 37 ° C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 minutes. The two should be clearly separated, otherwise centrifuge again. 7) Transfer the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the aqueous phase containing DNA to a new tube. Purification of DM and ethanol precipitation were then performed.
3, DNA的纯化和乙醇沉淀 3. Purification of DNA and ethanol precipitation
步骤: 1 )将 1/10体积 2mol/L醋酸钠和 2倍体积冷 100%乙醇加到 DNA溶液中, 混匀。 在- 20°C放置 1小时或至过夜。 2) 离心 10分钟。 3)小心吸出或倒出乙醇。 4)用 70°/»冷乙醇 500ul洗涤沉淀, 离心 5分钟。 5)小心吸出或倒出乙醇。 用 500ul 冷乙醇洗涤沉淀, 离心 5分钟。 6)小心吸出或倒出乙醇, 然后在吸水纸上倒置使 残余乙醇流尽。 空气干燥 10-15 分钟, 以使表面乙醇挥发。 注意不要使沉淀完全 干燥, 否则较难重新溶解。 7) 以小体积 TE或水重悬 DNA沉淀。 低速涡旋振荡或 用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1-5 X 106细胞所提取的 大约加 lul。 Steps: 1) Add 1/10 volume of 2mol / L sodium acetate and 2 volumes of cold 100% ethanol to the DNA solution and mix. Leave at -20 ° C for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or pour out the ethanol. 4) Wash the pellet with 500ul of 70 ° / »cold ethanol and centrifuge for 5 minutes. 5) Carefully aspirate or pour out the ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol, then invert on the absorbent paper to drain off the residual ethanol. Air dry for 10-15 minutes to allow the surface ethanol to evaporate. Be careful not to allow the pellet to dry completely, otherwise it will be more difficult to re-dissolve. 7) Resuspend the DNA pellet in a small volume of TE or water. Low-speed vortexing or pipetting, with a dropper, while gradually increasing the TE, mixed until fully dissolved DNA, every 1-5 X 10 6 cells extracted about plus lul.
以下第 8-13步骤仅用于必须除去污染时, 否则可直接进行第 14步骤。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8)将 RNA酶 A加到 DNA溶液中, 终浓度为 lOOug/ml, 37°C保温 30分钟。 9)加 入 SDS和蛋白酶 K, 终浓度分别为 0.5¾和 100ug/ml。 37°C保温 30分钟。 10)用 等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提反应液, 离心 10 分钟。 11)小 心移出水相, 用等体积的氯仿: 异戊醇 (24: 1) 重新抽提, 离心 10 分钟。 12) 小心移出水相, 加 1/10体积 2mol/L醋酸钠和 2.5体积冷乙醇, 混匀置 -20°C 1小 时。 13)用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3-6 步骤。 14 )测定 A26。和 A28。以检测 DNA的纯度及产率。 15 )分装后存放于 - 20°C。 样膜的制备: 8) Add RNase A to the DNA solution to a final concentration of 100 ug / ml, and incubate at 37 ° C for 30 minutes. 9) Add SDS and proteinase K to final concentrations of 0.5¾ and 100ug / ml, respectively. Incubate at 37 ° C for 30 minutes. 10) use An equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) was used to extract the reaction solution and centrifuged for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the aqueous phase, add 1/10 volume of 2mol / L sodium acetate and 2.5 volumes of cold ethanol, and mix well at -20 ° C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) Measure A 26 . And A 28 . To detect the purity and yield of DNA. 15) Store at -20 ° C after dispensing. Preparation of sample film:
1)取 4x2 张适当大小的硝酸纤维素膜(NC膜), 用铅笔在其上轻轻标出点样 位置及样号, 每一探针需两张 NC膜, 以便在后面的实验步骤中分别用高强度条件 和强度条件洗膜 。  1) Take 4x2 pieces of nitrocellulose membranes (NC membranes) of appropriate size, and mark the spotting position and sample number on it with a pencil. Two NC membranes are required for each probe, so that they can be used in the following experimental steps. The film was washed with high-strength conditions and strength conditions, respectively.
2) 吸取及对照各 15微升, 点于样膜上, 在室温中晾干。  2) Pipette and control 15 microliters each, spot on the sample film, and dry at room temperature.
3) 置于浸润有 0. Imol/LNaOH, 1.5mol/LNaCl的滤纸上 5分钟 (两次), 晾干置 于浸润有 0.5mol/L Tris-HCl ( pH7.0 ), 3raol/LNaCl 的滤纸上 5分钟 (两次), 晾 干。  3) Place on filter paper impregnated with 0.1 mol / L NaOH, 1.5 mol / L NaCl for 5 minutes (twice), dry and place on filter paper impregnated with 0.5 mol / L Tris-HCl (pH7.0), 3raol / LNaCl Allow to dry for 5 minutes (twice).
4) 夹于干净滤纸中, 以铝箔包好, 60- 80°C真空干燥 2小时。  4) Caught in clean filter paper, wrapped in aluminum foil, and dried under vacuum at 60-80 ° C for 2 hours.
探针的标记  Labeling of probes
1 ) 3 μ lProbe ( 0. IOD/Ιθμ 1 ), 加入 2 μ IKinase缓冲液, 8-10 uCi γ- 32P- dATP+2U Kinase, 以补加至终体积 20 μ 1。 1) 3 μl Probe (0.1 IOD / Ιθμ 1), add 2 μ IKinase buffer, 8-10 uCi γ- 32 P- dATP + 2U Kinase, to make up to a final volume of 20 μ 1.
2) 37 保温 2小时。  2) 37 Incubate for 2 hours.
3)加 1/5体积的溴酚蓝指示剂 (ΒΡΒΧ  3) Add 1/5 volume of bromophenol blue indicator (ΒΡΒΧ
4 ) it Sephadex G- 50柱。  4) it Sephadex G-50 column.
5 ) 至有 32P- Probe洗出前开始收集第一峰(可用 Monitor监测 )。 5) Before the 32 P-Probe is washed out, start collecting the first peak (can be monitored by Monitor).
6) 5滴 /管, 收集 10- 15管。  6) 5 drops / tube, collect 10-15 tubes.
7)用液体闪烁仪监测同位素量  7) Monitor the amount of isotope with a liquid scintillator
8 ) 合并第一峰的收集液后即为所需制备的 32P- Probe (第二峰为游离 γ- 32P- dATP )。 8) After combining the collection solutions of the first peak, the 32 P-Probe (the second peak is free γ- 32 P-dATP) is prepared.
预杂交  Pre-hybridization
将样膜置于塑料袋中,加入 3- 10mg预杂交液( lOxDen ardt's; 6xSSC, 0. lmg/ml CT DNA (小牛胸腺 DNA)。), 封好袋口后, 68°C水浴摇 2小时。  Place the sample membrane in a plastic bag, add 3-10 mg of pre-hybridization solution (lOxDen ardt's; 6xSSC, 0.1 mg / ml CT DNA (calf thymus DNA).), Seal the bag, and shake at 68 ° C in a water bath for 2 hour.
杂交  Cross
将塑料袋剪去一角, 加入制备好的探针, 封好袋口后, 42°C水浴摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake it at 42 ° C in a water bath overnight. Wash film:
高强度洗膜: 1 )取出已杂交好的样膜。 High-intensity washing film: 1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0. 1%SDS中, 40°C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, wash at 40 ° C for 15 minutes (twice).
3 ) 0. lxSSC, 0. 1¾SDS中 , 40°C洗 15分钟 ( 2次)。  3) Wash in 0.1xSSC, 0.125SDS at 40 ° C for 15 minutes (twice).
4 ) 0. lxSSC, 0. 1%SDS中, 55°C洗 30分钟 ( 2次), 室温晾干。 低强度洗膜:  4) Wash in 0.1xSSC, 0.1% SDS at 55 ° C for 30 minutes (twice), and dry at room temperature. Low-intensity washing film:
1 )取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0. l°/oSDS中, 37°C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1 ° / oSDS, wash at 37 ° C for 15 minutes (twice).
3 ) 0. lxSSC, 0. 1 SDS中, 37°C洗 15分钟 ( 2次)。  3) Wash in 0.1xSSC, 0.1 SDS at 37 ° C for 15 minutes (twice).
4 ) 0. lxSSC, 0. 1%SDS中, 40°C洗 15分钟 ( 2次), 室温晾干。  4) Wash in 0.1xSSC, 0.1% SDS at 40 ° C for 15 minutes (twice), and dry at room temperature.
X -光自显影: X-ray autoradiography:
-70°C , X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (compression time depends on the radioactivity of the hybrid spot).
实验结果:  Experimental results:
采用低强度洗膜条件所进行的杂交实验, 以上两个探针杂交斑放射性强弱没 有明显区别; 而釆用高强度洗膜条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显强于另一个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地分 析本发明的多核苷酸在不同组织中的存在和差异表达。 实施例 7 DNA Microarray  The hybridization experiments performed under low-intensity membrane washing conditions showed no significant difference in the radioactive intensity of the above two probes. However, in the hybridization experiments performed under high-intensity membrane washing conditions, the radioactive intensity of probe 1 was significantly stronger To the radioactive intensity of the hybridization spot of another probe. Therefore, the presence and differential expression of the polynucleotide of the present invention in different tissues can be analyzed qualitatively and quantitatively with the probe 1. Example 7 DNA Microarray
基因芯片或基因微矩阵 (DNA Microarray )是目前许多国家实验室和大制药 公司都在着手研制和开发的新技术, 它是指将大量的靶基因片段有序地、 高密度 地排列在玻璃、 硅等载体上, 然后用荧光检测和计算机软件进行数据的比较和分 析, 以达到快速、 高效、 高通量地分析生物信息的目的。 本发明的多核苷酸可作 为靶 DNA 用于基因芯片技术用于高通量研究新基因功能; 寻找和筛选组织特异性 新基因特别是肿瘤等疾病相关新基因; 疾病的诊断, 如遗传性疾病。 其具体方法 步骤在文献中巳有多种报道, 如可参阅文献 DeRi s i, J. L. , Lyer, V. &Brown, P. 0. (1997) Science278, 680-686.及文献 He l le, R. A. , Schema, M. , Cha i , A., Sha lom, D. , (1997) PNAS 94: 2150-2155.  Gene microarrays or DNA microarrays are new technologies currently being developed by many national laboratories and large pharmaceutical companies. It refers to the orderly and high-density arrangement of a large number of target gene fragments on glass, The data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information. The polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases . The specific method steps have been reported in the literature. For example, see DeRi si, JL, Lyer, V. & Brown, P. 0 (1997) Science 278, 680-686. And He l le, RA, Schema. , M., Cha i, A., Sha lom, D., (1997) PNAS 94: 2150-2155.
(一) 点样  (A) spotting
各种不同的全长 cDM共计 4000条多核苷酸序列作为靶 DM,其中包括本发明 的多核苷酸。 将它们分别通过 PCR 进行扩增, 纯化所得扩增产物后将其浓度调到 500ng/ul左右, 用 Cartes ian 7500点样仪(购自美国 Cartes ian公司)点于玻璃介 质上, 点与点之间的距离为 280 μ πι。 将点样后的玻片进行水合、 干燥、 置于紫外 交联仪中交联, 洗脱后干燥使 DM 固定在玻璃片上制备成芯片。 其具体方法步骤 在文献中巳有多种报道, 本实施例的点样后处理步驟是: A total of 4,000 polynucleotide sequences of various full-length cDM are used as target DM, including the polynucleotide of the present invention. Amplify them separately by PCR, and adjust the concentration of the amplified products to At about 500ng / ul, a Cartesian 7500 spotter (purchased from Cartesian Company, USA) was used to spot on the glass medium, and the distance between the spots was 280 μm. The spotted slides were hydrated, dried, and cross-linked in a UV cross-linker. After elution, the slides were fixed to fix the DM on the glass slides to prepare chips. The specific method steps are widely reported in the literature. The post-spot processing steps of this embodiment are:
1. 潮湿环境中水合 4小时;  1. Hydration in a humid environment for 4 hours;
2. 0. 2%SDS洗涤 1分钟;  2. 0.2% SDS was washed for 1 minute;
3. ddH20洗涤两次, 每次 1分钟; 3. Wash twice with ddH 2 0 for 1 minute each time;
4. NaBH4封闭 5分钟; 4. NaBH 4 is blocked for 5 minutes;
5. 95°C水中 2分钟;  5. 95 ° C water for 2 minutes;
6. 0. 2°/。SDS洗涤 1分钟;  6. 0 ° 2 ° /. Wash with SDS for 1 minute;
7. ddH20冲洗两次; 7. Rinse twice with ddH 2 0;
8. 凉干, 25°C储存于暗处备用。  8. Dry and store at 25 ° C in the dark for future use.
(二)探针标记  (Two) probe marking
用一步法分别从人体混合组织与机体特定组织 (或经过刺激的细胞株) 中抽 提总 mRNA, 并用 Ol igotex mRNA Midi Ki t (购自 QiaGeri公司)纯化 tnRNA,通过反转 录分另 (J将焚光试剂 Cy3dUTP (5-Amino-propargy 1-2· -deoxyur i dine 5'-tr iphate coupled to Cy3 f luorescent dye, 购自 Amershara Phamacia Biotech 公司)标记 人体混合组织的 mRNA, 用荧光试剂 Cy5dUTP (5- Amino-propargyl-2'- deoxyuridine 5'-tr ip ate coupled to Cy5 f luorescent dye, 购自 Amershara Phamacia Biotech 公司)标记机体特定组织 (或经过刺激的细胞株) mRNA, 经纯化后制备出探针。 具 体步骤参照及方法见:  Total mRNA was extracted from human mixed tissues and specific tissues (or stimulated cell lines) in one step, and tnRNA was purified by Ol igotex mRNA Midi Ki t (purchased from QiaGeri). The fluorescent reagent Cy3dUTP (5-Amino-propargy 1-2 · -deoxyur i dine 5'-tr iphate coupled to Cy3 f luorescent dye, purchased from Amershara Phamacia Biotech) was used to label the mRNA of human mixed tissue, and the fluorescent reagent Cy5dUTP ( 5- Amino-propargyl-2'- deoxyuridine 5'-tr ip ate coupled to Cy5 f luorescent dye, purchased from Amershara Phamacia Biotech company, labeled the body's specific tissue (or stimulated cell line) mRNA, purified and prepared to detect Please refer to the specific steps and methods:
Schena, M. , Shalon, D. , Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M. , Shalon, Dari. , Davi s, R. W. (1995) Science. 270. (20) : 467-480. Schena, M., Shalon, D., Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Shalon, Dari., Davi s, RW (1995) Science. 270. (20): 467-480.
(三) 杂交 (Three) cross
分别将来自 以上两种组织的探针与芯片一起在 UniHyb™ Hybr idizat ion Combine the probes from the two tissues with the chips at UniHyb ™ Hybr idizat ion
Solut ion (购自 TeleChem公司)杂交液中进行杂交 16 小时, 室温用洗涤液 (l x SSC, 0. 2簡) 洗涤后用 ScanArray 3000扫描仪(购自美国 General Scanning公 司 )进行扫描, 扫描的图象用 Iraagene软件(美国 Biodiscovery公司) 进行数据 分析处理, 算出每个点的 Cy3/Cy5比值。 Solut ion (purchased from TeleChem) was used for hybridization for 16 hours, and washed with a washing solution (lx SSC, 0.2 Jan.) at room temperature, and then scanned with a ScanArray 3000 scanner (purchased from General Scanning, USA). The scanned image For example, the data were analyzed and processed by Iraagene software (Biodiscovery, USA) to calculate the Cy3 / Cy5 ratio of each point.
以上机体特定组织(或经过刺激的细胞株)分别为胎脑、膀胱粘膜、 PMA+的 Ecv304 细胞株、 LPS+的 Ecv304 细胞株胸腺、 正常成纤维细胞 1024NC, Fibroblas t , 生长因子刺激, 1024NT、 疤痕成 fc 生长因子刺激, 1013HT、 疤痕成 f c未用生 长因子刺激, 101 3HC、 膀胱癌建株细胞 EJ、 膀胱癌旁、 膀胱癌、 肝癌、 肝癌细 胞株、 胎皮、 脾脏、 前列腺癌、 空肠腺癌、 贲门癌。 根据这 18 个 Cy3/Cy5 比 值绘出折方图。 (图 1 ) 。 由图可见本发明所述的人核糖体蛋白 L7a20. 57和人 核糖体蛋白 L7a表达谱很相似。 工业实用性 The above specific tissues (or stimulated cell lines) are fetal brain, bladder mucosa, PMA + Ecv304 cell line, LPS + Ecv304 cell line, thymus, normal fibroblasts 1024NC, Fibroblas t, growth factor stimulation, 1024NT, scar formation fc growth factor stimulation, 1013HT, scar into unused fc Long factor stimulation, 101 3HC, bladder cancer construct cells EJ, bladder cancer, bladder cancer, liver cancer, liver cancer cell lines, placenta, spleen, prostate cancer, jejunal adenocarcinoma, and cardia cancer. Draw a chart based on these 18 Cy3 / Cy5 ratios. (figure 1 ) . It can be seen from the figure that the expression profile of human ribosomal protein L7a20. 57 and human ribosomal protein L7a according to the present invention are very similar. Industrial applicability
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和免疫 性疾病等。  The polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases.
真核生物核糖体的生物合成是一个十分复杂的过程, 在各组织细胞的细胞核内 完成。 各种核糖体蛋白质在大小亚基内都有一定的位置, rRM是其中的骨架。 核 糖体蛋白 L7a蛋由是一种新的核糖体蛋白, 它在生物体内作为核糖体大亚单位的重 要组成成分; 参与调控核糖体大亚单位的组成及作用活性。 该蛋白的突变或表达 异常将导致细胞内核糖体的合成异常, 进而影响与之相关的蛋白合成过程的进行。 该蛋白在生物体内通常与一些相关组织的发育障碍及蛋白质代谢紊乱性疾病的发 生有关。 本发明的多肽的表达谱与人核糖体蛋白 L7a蛋白的表达谱相一致, 两者具 有相似的生物学功能。 本发明的多肽在体内作为核糖体大亚单位的重要组成成分, 参与调控核糖体大亚单位的组成及作用活性。 该蛋白的突变或表达异常将导致细 胞内核糖体的合成异常, 进而影响与之相关的蛋白合成过程的进行。 进而导致相 关组织的发育障碍及蛋白质代谢紊乱性疾病的发生, 这些疾病包括但不限于:  Eukaryotic ribosome biosynthesis is a very complicated process, which is completed in the nucleus of various tissue cells. Various ribosomal proteins have certain positions within the large and small subunits, and rRM is the backbone of them. Ribosomal protein L7a is a new ribosomal protein, which is an important component of the ribosome subunit in the body; it is involved in regulating the composition and action of the ribosome subunit. The mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the protein synthesis process related to it. This protein is usually related to the developmental disorders of some related tissues and the development of disorders of protein metabolism. The expression profile of the polypeptide of the present invention is consistent with the expression profile of the human ribosomal protein L7a protein, and both have similar biological functions. The polypeptide of the present invention is an important component of the ribosome subunit in vivo, and is involved in regulating the composition and action activity of the ribosome subunit. The mutation or abnormal expression of this protein will lead to abnormal synthesis of nuclear ribosomes, and then affect the progress of related protein synthesis processes. In turn, it leads to developmental disorders of related tissues and disorders of protein metabolism. These diseases include, but are not limited to:
生长发育障碍性疾病: 精神发育迟缓, 脑性瘫痪, 脑发育障碍, 智力障碍, 家 族性脑神经核发育不全综合症, 斜视, 皮肤、 脂肪和肌肉发育不良性疾病如先天 性皮肤松弛症、 早老症、 先天性角化不良, 各种代谢缺陷病如呆小症, 侏儒症, 性发育迟缓症等;  Growth and development disorders: mental retardation, cerebral palsy, brain development disorders, mental retardation, familial cerebral nucleus dysplasia syndrome, strabismus, skin, fat and muscular dysplasia such as congenital skin laxity, premature aging Dysfunction, congenital keratosis, various metabolic defects such as stunting, dwarfism, sexual retardation, etc .;
蛋白质代谢紊乱可影响蛋白质下列主要生理功能, 进而导致相关疾病的发生: 一. 提供机体能量; 维持组织生长、 更新和修补:  Disturbances in protein metabolism can affect the following major physiological functions of proteins, which can lead to the occurrence of related diseases: 1. Provide body energy; maintain tissue growth, renewal and repair:
肌肉萎缩, 四肢软弱, 身体消瘦; 严重者可呈 "恶液质" 表现;  Muscle atrophy, weak limbs, and wasted body; severe cases can present with "caustic" symptoms;
二. 产生一些生理活性物质, 如激素、 抗体、 胺类等:  2. Produce some physiologically active substances, such as hormones, antibodies, amines, etc .:
1蛋白质肽类激素功能紊乱可导致如下疾病发生:  1 protein peptide hormone dysfunction can cause the following diseases:
1 )胰岛素和捷高血糖素: 糖尿病, 低血糖症等;  1) Insulin and glucagon: diabetes, hypoglycemia, etc .;
2 ) 下丘脑和垂体激素: 巨人症, 侏儒症, 肢端肥大症, 皮质醇增多症 (柯兴 综合症), 原发性性醛固酮增多症, 继发慢性肾上腺皮质功能减退, 甲状腺机能亢 进症, 甲状腺机能减退症 (呆小病, 幼年型甲减, 成年型甲减), 男 /女不育症, 月经失调 (功能性子宫出血、 闭经、 多囊卵巢综合症、 经前期紧张综合症、 更年 期综合症), 性发育障碍, 尿崩症、 抗利尿激素分泌不当综合症, 泌乳异常等;2) Hypothalamus and pituitary hormones: giant disease, dwarfism, acromegaly, cortisol syndrome (Cushing's syndrome), primary aldosteronism, secondary chronic adrenal insufficiency, hyperthyroidism Onset, Hypothyroidism (Small disease, Juvenile hypothyroidism, Adult hypothyroidism), Male / female infertility, Menstrual disorders (functional uterine bleeding, amenorrhea, polycystic ovary syndrome, premenstrual stress syndrome) Disease, menopausal syndrome), sexual development disorder, diabetes insipidus, inappropriate antidiuretic hormone secretion syndrome, abnormal lactation, etc .;
3 ) 甲状旁腺素: 甲状旁腺机能亢进症, 甲状旁腺机能减退症等; 3) parathyroid hormone: hyperparathyroidism, hypoparathyroidism, etc .;
4 ) 胃肠道激素: 消化性溃疡, 慢性消化不良, 慢性胃炎等;  4) Gastrointestinal hormones: peptic ulcer, chronic indigestion, chronic gastritis, etc .;
2. 胺类物质代谢紊乱可导致如下疾病发生:  2. Disorders of amine metabolism can cause the following diseases:
精神错乱, 癫癌, 舞蹈病, 肝性脑病 ( Y—氨基丁酸、 5—羟色胺、 谷氨酰胺), 暈动病, I 一型变态反应性疾病 (荨麻疹、 枯草热、 过敏性鼻炎、 皮肤过敏), 消 化性溃疡 (组胺), 高胆固醇血症 (牛碳酸), 肿瘤 (多胺) 等;  Insanity, epilepsy, chorea, hepatic encephalopathy (Y-aminobutyric acid, serotonin, glutamine), motion sickness, type I allergic diseases (urticaria, hay fever, allergic rhinitis, Skin allergies), peptic ulcer (histamine), hypercholesterolemia (taurine), tumors (polyamines), etc .;
3. 抗体缺陷易发生各种感染:  3. Antibody deficiency is prone to various infections:
败血症, 化脓性脑膜炎, 肺炎; 气管炎, 中耳炎, 脓皮病等;  Septicemia, suppurative meningitis, pneumonia; bronchitis, otitis media, pyoderma, etc .;
三. 某些蛋白质的特殊生理作用:  3. The special physiological effects of certain proteins:
各种血红蛋白病 (贫血、 黄疸、 组织缺氧致有机酸血症), 各种凝血因子缺乏 症 (出血), 肌痉挛, 肌强制, 肌麻痹 (肌动蛋白) 等;  Various hemoglobinopathy (anemia, jaundice, tissue hypoxia-induced organic acidemia), various coagulation factor deficiency (bleeding), muscle spasm, muscle forcing, muscle paralysis (actin), etc .;
核糖体蛋白 L7a蛋白是一种新的核糖体蛋白, 该蛋白的突变或表达异常将导致 细胞内核糖体的合成异常, 进而影响与之相关的蛋白合成过程的进行。 己知肿瘤 组织可以合成一些肿瘤相关蛋白; 如甲种胎儿蛋白 (肝癌)、 胎儿硫糖蛋白 (胃癌) 等, 核糖体蛋白 L7a 蛋白该蛋白的突变或表达异常将导致细胞内核糖体的合成异 常, 进而影响蛋白质的合成, 可产生一些异种蛋白, 可能与一些肿瘤的发生有关。 本发明的多肽的表达谱与人核糖体蛋白 L7a蛋白的表达谐相一致, 两者具有相似的 生物学功能。 本发明的多肽的突变或表达异常将导致细胞内核糖体的合成异常, 进而影响蛋白质的合成, 可产生一些异种蛋白, 可能与一些肿瘤的发生有关。 这 些疾病包括但不限于:  Ribosomal protein L7a protein is a new type of ribosomal protein. Mutation or abnormal expression of this protein will lead to abnormal synthesis of the core ribosomes of the cell, and then affect the progress of the related protein synthesis process. It is known that tumor tissues can synthesize some tumor-associated proteins; such as a fetal protein (liver cancer), fetal saccharoprotein (gastric cancer), etc., ribosomal protein L7a protein. Mutation or abnormal expression of this protein will lead to abnormal synthesis of cell core glycosomes. This in turn affects the synthesis of proteins, which can produce some heterogeneous proteins, which may be related to the occurrence of some tumors. The expression profile of the polypeptide of the present invention is consistent with the expression of the human ribosomal protein L7a protein, and both have similar biological functions. Mutation or abnormal expression of the polypeptide of the present invention will lead to abnormal synthesis of the core ribosomes of the cell, and then affect protein synthesis. Some heterogeneous proteins may be produced, which may be related to the occurrence of some tumors. These diseases include, but are not limited to:
各种组织的肿瘤: 胃癌、 肝癌、 肺癌、 食管癌、 乳腺癌、 白血病、 淋巴瘤、 甲 状腺肿瘤、 子宫肌癉、 成神经细胞瘤、 星形细胞瘤、 室管膜瘤、 胶质细胞瘤、 结 肠癌、 恶性组织细胞病、 黑色素瘤、 畸胎瘤、 肉瘤、 肾上腺癌、 膀胱癌、 骨癌、 骨肉瘤、 骨髓瘤、 骨髓癌、 脑癌、 子宫癌、 子官内膜癌、 胆囊癌、 结肠癌、 胸腺 肿瘤鼻腔及鼻窦肿瘤、 鼻咽癌、 喉癌、 气管肿瘤、 胸膜间皮瘤、 纤维瘤、 纤维肉 瘤、 脂肪瘤、 脂肪肉瘤、 平滑肌瘤等;  Tumors of various tissues: gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine myometrium, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Colon cancer, malignant histiocytosis, melanoma, teratoma, sarcoma, adrenal cancer, bladder cancer, bone cancer, osteosarcoma, myeloma, bone marrow cancer, brain cancer, uterine cancer, endometrial cancer, gallbladder cancer, Colon cancer, thymic tumor, nasal cavity and sinus tumor, nasopharyngeal cancer, laryngeal cancer, tracheal tumor, pleural mesothelioma, fibroid, fibrosarcoma, lipoma, liposarcoma, leiomyoma, etc .;
本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人核糖体 蛋白 L7a20. 57 的药剂的方法。 激动剂提高人核糖体蛋白 L7a20. 57 刺激细胞增 殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各种癌症。 例如, 能在药物的存在下, 将哺乳动物细胞或表达人核糖体蛋白 L7a20. 57 的膜 制剂与标记的人核糖体蛋白 L7a20. 57 —起培养。 然后测定药物提高或阻遏此相 互作用的能力。 The invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human ribosomal protein L7a20.57. Agonists enhance human ribosomal protein L7a20. 57 stimulates biological functions such as cell proliferation, while antagonists prevent and treat disorders related to cell proliferation, such as various cancers. For example, mammalian cells or membrane preparations expressing human ribosomal protein L7a20. 57 can be cultured together with labeled human ribosomal protein L7a20. 57 in the presence of a drug. The ability of the drug to increase or block this interaction is then determined.
人核糖体蛋白 L7a20. 57的拮抗剂包括筛选出的抗体、 化合物、 受体缺失物 和类似物等。 人核糖体蛋白 L7a20. 57 的拮抗剂可以与人核糖体蛋白 L7a20. 57 结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽的活性位点结合使 该多肽不能发挥生物学功能。  Antagonists of human ribosomal protein L7a20.57 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human ribosomal protein L7a20. 57 can bind to human ribosomal protein L7a20. 57 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that the polypeptide cannot exert its biology Features.
在筛选作为拮抗剂的化合物时, 可以将人核糖体蛋白 L7a20. 57 加入生物分 析测定中, 通过测定化合物对人核糖体蛋白 L7a20. 57和其受体之间相互作用的 影响来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可以筛选出 起拮抗剂作用的受体缺失物和类似物。 能与人核糖体蛋白 L7a20. 57结合的多肽 分子可通过筛选由各种可能组合的氨基酸结合于固相物组成的随机多肽库而获 得。 筛选时, 一般应对人核糖体蛋白 L7a20. 57分子进行标记。 本发明提供了用 多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供了针对人核糖体蛋白 L7a20. 57 抗原决定簇的抗体。 这些抗体包括(但不限于): 多克隆抗体、 单克隆 抗体、 嵌合抗体、 单链抗体、 Fab片段和 Fab表达文库产生的片段。  When screening compounds as antagonists, human ribosomal protein L7a20. 57 can be added to bioanalytical assays to determine whether a compound is a compound by measuring the effect of the compound on the interaction between human ribosomal protein L7a20.57 and its receptor. Antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same way as for screening compounds described above. Polypeptide molecules capable of binding to human ribosomal protein L7a20.57 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. When screening, the human ribosomal protein L7a20. 57 molecule should generally be labeled. The present invention provides a method for producing antibodies using polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human ribosomal protein L7a20.57 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用人核糖体蛋白 L7a20. 57 直接注射免疫动物 (如家 兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不限 于弗氏佐剂等。 制备人核糖体蛋白 L7a20. 57 的单克隆抗体的技术包括但不限于 杂交瘤技术(Kohler and Mi l s te in. Na ture, 1975, 256: 495-497) , 三瘤技术, 人 Β-细胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可变区结合 的嵌合抗体可用已有的技术生产(Morr i son et a l , PNAS, 1985, 81: 6851)。 而已 有的生产单链抗体的技术(U. S. Pa t No. 4946778)也可用于生产抗人核糖体蛋白 L7a20. 57的单链抗体。 抗人核糖体蛋白 L7a20. 57的抗体可用于免疫组织化学技 术中, 检测活检标本中的人核糖体蛋白 L7a20. 57。 与人核糖体蛋白 L7a20. 57结 合的单克隆抗体也可用放射性同位素标记, 注入体内可跟踪其位置和分布。 这 种放射性标记的抗体可作为一种非创伤性诊断方法用于肿瘤细胞的定位和判断 是否有转移。  Polyclonal antibodies can be produced by injecting human ribosomal protein L7a20. 57 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not limited to Freund's Agent. Techniques for preparing monoclonal antibodies to human ribosomal protein L7a20.57 include, but are not limited to, hybridoma technology (Kohler and Miste in. Nature, 1975, 256: 495-497), triple tumor technology, human beta-cell hybridization Tumor technology, EBV-hybridoma technology, etc. Chimeric antibodies that bind human constant regions to non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851). The existing technology for producing single chain antibodies (U.S. Pat No. 4946778) can also be used to produce single chain antibodies against human ribosomal protein L7a20.57. Antibodies against human ribosomal protein L7a20. 57 can be used in immunohistochemical techniques to detect human ribosomal protein L7a20. 57 in biopsy specimens. Monoclonal antibodies bound to human ribosomal protein L7a20.57 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特殊部位的免疫毒素。 如人核糖体蛋白 Antibodies can also be used to design immunotoxins that target a particular part of the body. Human ribosomal protein
L7a20. 57 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋白, 红豆碱等)共价结合。 一种通常的方法是用巯基交联剂如 SPDP , 攻击抗体的氨 基, 通过二硫键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭人核 糖体蛋白 L7a20. 57 阳性的细胞。 本发明中的抗体可用于治疗或预防与人核糖体 蛋白 L7a20. 57相关的疾病。 给予适当剂量的抗体可以刺激或阻断人核糖体蛋白 L7a20. 57 的产生或活性。 本发明还涉及定量和定位检测人核糖体蛋白 L7a20. 57 水平的诊断试验方法。 这些试验是本领域所熟知的, 且包括 FISH测定和放射免 疫测定。 试验中所检测的人核糖体蛋白 L7a20. 57水平, 可以用作解释人核糖体 蛋白 L7a20. 57 在各种疾病中的重要性和用于诊断人核糖体蛋白 L7a20. 57 起作 用的疾病。 本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或 酶进行特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质 谱分析。 ' L7a20. 57 High affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is to attack the ammonia of the antibody with a thiol crosslinker such as SPDP. 57, through the exchange of disulfide bonds to bind toxins to antibodies, this hybrid antibody can be used to kill human ribosomal protein L7a20. 57 positive cells. The antibodies in the present invention can be used to treat or prevent diseases related to human ribosomal protein L7a20.57. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human ribosomal protein L7a20.57. The invention also relates to a diagnostic test method for quantitative and localized detection of human ribosomal protein L7a20.57 levels. These tests are well known in the art and include FISH assays and radioimmunoassays. The level of human ribosomal protein L7a20.57 detected in the test can be used to explain the importance of human ribosomal protein L7a20.57 in various diseases and to diagnose diseases in which human ribosomal protein L7a20.57 plays a role. The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. '
编码人核糖体蛋白 L7a20. 57的多核苷酸也可用于多种治疗目的。 基因治疗 技术可用于治疗由于人核糖体蛋白 L7a20. 57 的无表达或异常 /无活性表达所致 的细胞增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体)可设计用于 表达变异的人核糖体蛋白 L7a20. 57 , 以抑制内源性的人核糖体蛋白 L7a20. 57活 性。 例如, 一种变异的人核糖体蛋白 L7a20. 57可以是缩短的、 缺失了信号传导 功能域的人核糖体蛋白 L7a20. 57 , 虽可与下游的底物结合, 但缺乏信号传导活 性。 因此重组的基因治疗载体可用于治疗人核糖体蛋白 L7a20. 57表达或活性异 常所致的疾病。 来源于病毒的表达载体如逆转录病毒、 腺病毒、 腺病毒相关病 毒、 单纯疱疹病毒、 细小病毒等可用于将编码人核糖体蛋白 L7a20. 57 的多核苷 酸转移至细胞内。 构建携带编码人核糖体蛋白 L7a20. 57 的多核苷酸的重组病毒 载体的方法可见于已有文献(Sambrook, et al. )。 另外重组编码人核糖体蛋白 L7a20. 57的多核苷酸可包装到脂质体中转移至细胞内。  The polynucleotide encoding human ribosomal protein L7a20.57 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development or metabolism caused by the non-expression or abnormal / inactive expression of human ribosomal protein L7a20.57. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human ribosomal protein L7a20.57 to inhibit endogenous human ribosomal protein L7a20.57 activity. For example, a mutated human ribosomal protein L7a20.57 may be a shortened human ribosomal protein L7a20.57, which lacks a signaling functional domain. Although it can bind to downstream substrates, it lacks signaling activity. Therefore, the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human ribosomal protein L7a20.57. Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer the polynucleotide encoding human ribosomal protein L7a20.57 into cells. Methods for constructing a recombinant viral vector carrying a polynucleotide encoding human ribosomal protein L7a20.57 can be found in the existing literature (Sambrook, et al.). In addition, a recombinant polynucleotide encoding human ribosomal protein L7a20.57 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制人核糖体蛋白 L7a20. 57 mRNA 的寡核苷酸(包括反义 RNA和 DNA)以及 核酶也在本发明的范围之内。 核酶是一种能特异性分解特定 RM 的酶样 RNA分 子, 其作用机制是核酶分子与互补的靶 RNA 特异性杂交后进行核酸内切作用。 反义的 RNA和 DNA及核酶可用已有的任何 RNA或 DNA合成技术获得, 如固相磷 酸酰胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RNA 分子可通过编码 该 RNA 的 DNA序列在体外或体内转录获得。 这种 DNA序列巳整合到载体的 RNA 聚合酶启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修 饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非 磷酸二酯键。 Oligonucleotides (including antisense RNA and DNA) and ribozymes that inhibit human ribosomal protein L7a20.57 mRNA are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that can specifically decompose a specific RM. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RNA for endonucleation. Antisense RNA, DNA, and ribozymes can be obtained by any existing RNA or DNA synthesis technology, such as the technology for the synthesis of oligonucleotides by solid-phase phosphoramidite chemical synthesis has been widely used. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DNA sequence is integrated downstream of the vector's RNA polymerase promoter. To increase the stability of nucleic acid molecules, they can be modified in a variety of ways. For example, if the sequence length on both sides is increased, the linkage between ribonucleosides should use phosphorothioate or peptide bonds instead of phosphodiester bonds.
编码人核糖体蛋白 L7a20. 57 的多核苷酸可用于与人核糖体蛋白 L7a20. 57 的相关疾病的诊断。 编码人核糖体蛋白 L7a20. 57 的多核苷酸可用于检测人核糖 体蛋白 L7a20. 57 的表达与否或在疾病状态下人核糖体蛋白 L7a20. 57 的异常表 达。 如编码人核糖体蛋白 L7a20. 57的 DNA序列可用于对活检标本进行杂交以判 断人核糖体蛋白 L7a20. 57的表达状况。杂交技术包括 Southern印迹法, Nor thern 印迹法、 原位杂交等。 这些技术方法都是公开的成熟技术, 相关的试剂盒都可 从商业途径得到。 本发明的多核苷酸的一部分或全部可作为探针固定在微阵列 (Mi croarray)或 DNA 芯片(又称为 "基因芯片" )上, 用于分析组织中基因的差 异表达分析和基因诊断。 用人核糖体蛋白 L7a20. 57特异的引物进行 RNA-聚合酶 链反应(RT- PCR)体外扩增也可检测人核糖体蛋白 L7a20. 57 的转录产物。 检测人 核糖体蛋白 L7a20. 57 基因的突变也可用于诊断人核糖体蛋白 L7a20. 57 相关的 疾病。 人核糖体蛋白 L7a20. 57 突变的形式包括与正常野生型人核糖体蛋白 L7a20. 57 DNA 序列相比的点突变、 易位、 缺失、 重组和其它任何异常等。 可用 已有的技术如 Southern 印迹法、 DNA序列分析、 PCR 和原位杂交检测突变。 另 夕卜, 突变有可能影响蛋白的表达, 因此用 Nor thern 印迹法、 Wes tern 印迹法可 间接判断基因有无突变。  The polynucleotide encoding human ribosomal protein L7a20. 57 can be used for the diagnosis of diseases related to human ribosomal protein L7a20. 57. The polynucleotide encoding human ribosomal protein L7a20. 57 can be used to detect the expression of human ribosomal protein L7a20. 57 or the abnormal expression of human ribosomal protein L7a20. 57 in a disease state. For example, a DNA sequence encoding human ribosomal protein L7a20. 57 can be used to hybridize biopsy specimens to determine the expression status of human ribosomal protein L7a20. 57. Hybridization techniques include Southern blotting, Nor thern blotting, and in situ hybridization. These techniques and methods are all mature and open technologies, and related kits are commercially available. A part or all of the polynucleotides of the present invention can be used as probes to be fixed on a micro array or a DNA chip (also called a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues. Human ribosomal protein L7a20. 57 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human ribosomal protein L7a20. 57 transcripts. Detection of mutations in the human ribosomal protein L7a20. 57 gene can also be used to diagnose human ribosomal protein L7a20. 57-related diseases. Human ribosomal protein L7a20.57 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human ribosomal protein L7a20.57 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, the mutation may affect the expression of the protein, so the Nor thern blotting and Wes tern blotting can be used to indirectly determine whether there is a mutation in the gene.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. The sequence specifically targets a specific position on a human chromosome and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for marking chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDNA制备 PCR引物(优选 15-35bp) , 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。  In short, a PCR primer (preferably 15-35bp) is prepared from the cDNA, and the sequence can be located on the chromosome. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 cDNA克隆与中期染色体进行荧光原位杂交(FISH) , 可以在一个步骤中精 确地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manua l of Bas ic Techniques, Pergamon Pres s, New York (1988)。 Fluorescent in situ hybridization (FISH) of cDNA clones with metaphase chromosomes can be refined in one step Perform chromosomal mapping accurately. For a review of this technique, see Verma et al., Human Chromosomes: a Manua l of Basic Techniques, Pergamon Pres s, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见于例如, V. Mckus ick, Mendel ian Inher i tance in Man (可通过与 Johns Hopkins Univers i ty Wel ch Medical Library联机获得)。 然后可通过连锁分析, 确定基因与业巳定位到染色体区域 上的疾病之间的关系。  Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendelian Inheritance in Man (available online with Johns Hopkins University Welch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that are mapped to chromosomal regions.
接着, 需要测定患病和未患病个体间的 cDM或基因组序列差异。 如果在一 些或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该突变可能是疾病的病因。 比较患病和未患病个体, 通常涉及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA, 可以是 50至 500个潜在致病基因间之一种(假定 1兆碱基作图分辨能力和每 20kb对应于一个基因)。  Next, the difference in cDM or genomic sequence between the affected and unaffected individuals needs to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in chromosomes, such as deletions or translocations that are visible at the chromosomal level or detectable with cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the chromosomal region associated with the disease can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping resolution) Capacity and each 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。  The invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 人核糖体蛋白 L7a20. 57 以有效地治疗和 /或预 防具体的适应症的量来给药。 施用于患者的人核糖体蛋白 L7a20. 57 的量和剂量 范围将取决于许多因素, 如给药方式、 待治疗者的健康条件和诊断医生的判断。  The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Human ribosomal protein L7a20. 57 is administered in an amount effective to treat and / or prevent a specific indication. The amount and range of human ribosomal protein L7a20.57 administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

Claims

权 利 要 求 书 Claim
1、一种分离的多肽-人核糖体蛋白 L7a20. 57 ,其特征在于它包含有: SEQ ID NO: 2 所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human ribosomal protein L7a20.57, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative thereof.
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基 酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。 2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2所述的多肽, 其特征在于它包含具有 SEQ ID NO: 2所示的氨基 酸序列的多肽。  3. The polypeptide according to claim 2, characterized in that it comprises a polypeptide having the amino acid sequence shown in SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: (a) 编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍生 物的多核苷酸;  4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of: (a) encoding a polypeptide having the amino acid sequence shown in SEQ ID NO: 2 or a fragment thereof, or an analog thereof; Polynucleotides of derivatives;
(b) 与多核苷酸 (a ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to polynucleotide (a); or
(c) 与 (a ) 或 (b ) 有至少 70°/。相同性的多核苷酸。  (c) at least 70 ° / to (a) or (b). Identical polynucleotides.
5、 如权利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2.
6、如杈利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1中 724-1287位的序列或 SEQ ID NO: 1中 1-1597位的序列。  6. The polynucleotide according to claim 4, wherein the sequence of said polynucleotide comprises a sequence of positions 724-1287 in SEQ ID NO: 1 or positions 1-1597 in SEQ ID NO: 1 sequence.
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4-6 中的 任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载 体。  7. A recombination vector containing an exogenous polynucleotide, characterized in that it is a recombination constructed by the polynucleotide according to any one of claims 4-6 and a plasmid, virus or a carrier expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自于下 列一种宿主细胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
(a) 用权利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4-6 中的任一权利要求所述多核苷酸转化或转导的宿主细 胞。  (b) a host cell transformed or transduced with a polynucleotide according to any one of claims 4-6.
9、 一种具有人核糖体蛋白 L7a20. 57 活性的多肽的制备方法, 其特征在于所述 方法包括:  9. A method for preparing a polypeptide having human ribosomal protein L7a20.57 activity, characterized in that the method comprises:
(a) 在表达人核糖体蛋白 L7a20. 57 条件下, 培养权利要求 8 所述的工程化 宿主细胞;  (a) culturing the engineered host cell according to claim 8 under the condition of expressing human ribosomal protein L7a20.57;
(b) 从培养物中分离出具有人核糖体蛋白 L7a20. 57活性的多肽。  (b) A polypeptide having human ribosomal protein L7a20.57 activity is isolated from the culture.
10、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人核糖体蛋白 L7a20. 57特异性结合的抗体。 10. An antibody capable of binding to a polypeptide, characterized in that said antibody is an antibody capable of specifically binding to human ribosomal protein L7a20.57.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人核糖体蛋白 L7a20. 57的活性的化合物。 11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human ribosomal protein L7a20.57.
12、 如权利要求 11所述的化合物, 其特征在于它是 SEQ ID NO: 1所示的多核苷 酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
1 3、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人 核糖体蛋白 L7a20. 57在体内、 体外活性的方法。 1 3. A use of the compound according to claim 11, characterized in that the compound is used for a method for regulating the activity of human ribosomal protein L7a20.57 in vivo and in vitro.
14、 一种检测与权利要求 1-3 中的任一权利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的 活性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or susceptibility to a disease associated with a polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the activity of the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如杈利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人核糖体蛋白 L7a20. 57 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者用于 肽指紋图谱鉴定。 15. The use of the polypeptide according to any one of claims 1-3, characterized in that it is used to screen mimetics, agonists, antagonists or inhibitors of human ribosomal protein L7a20.57; or Identification of peptide fingerprints.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因 芯片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物 的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑 制剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人核糖体蛋 白 L7a20. 57异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that the polypeptide, polynucleotide or mimetic, agonist, antagonist is used Or the inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with human ribosomal protein L7a20.57 abnormality.
18、 权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如恶性肿瘤, 血液病, HIV感染和免疫性疾病和各类炎症的药物。 18. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or compound is used for preparing for treating malignant tumors, blood, etc. Disease, HIV infection and immune diseases and drugs of various inflammations.
PCT/CN2001/001137 2000-07-07 2001-07-02 A novel polypeptide, a human ribosomal protein l7a20.57 and the polynucleotide encoding the polypeptide WO2002026794A1 (en)

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Citations (1)

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US4865970A (en) * 1986-02-28 1989-09-12 Hoffmann-La Roche Inc. Method of detecting ribosomal protein antibodies in systemic lupus erythematosus

Patent Citations (1)

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Publication number Priority date Publication date Assignee Title
US4865970A (en) * 1986-02-28 1989-09-12 Hoffmann-La Roche Inc. Method of detecting ribosomal protein antibodies in systemic lupus erythematosus

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