WO2002025489A1 - Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet - Google Patents

Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet Download PDF

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Publication number
WO2002025489A1
WO2002025489A1 PCT/JP2000/006385 JP0006385W WO0225489A1 WO 2002025489 A1 WO2002025489 A1 WO 2002025489A1 JP 0006385 W JP0006385 W JP 0006385W WO 0225489 A1 WO0225489 A1 WO 0225489A1
Authority
WO
WIPO (PCT)
Prior art keywords
genes
function
gene
partial tree
displaying method
Prior art date
Application number
PCT/JP2000/006385
Other languages
English (en)
French (fr)
Inventor
Yasuyuki Nozaki
Ryo Nakashige
Takuro Tamura
Original Assignee
Hitachi Software Engineering Co., Ltd.
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Hitachi Software Engineering Co., Ltd. filed Critical Hitachi Software Engineering Co., Ltd.
Priority to PCT/JP2000/006385 priority Critical patent/WO2002025489A1/ja
Priority to JP2002529422A priority patent/JP3532911B2/ja
Priority to US10/129,251 priority patent/US7127354B1/en
Priority to EP00961085A priority patent/EP1321858A4/en
Publication of WO2002025489A1 publication Critical patent/WO2002025489A1/ja

Links

Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B45/00—ICT specially adapted for bioinformatics-related data visualisation, e.g. displaying of maps or networks
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
    • G16B40/30—Unsupervised data analysis
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding

Landscapes

  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Medical Informatics (AREA)
  • Data Mining & Analysis (AREA)
  • Health & Medical Sciences (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Biotechnology (AREA)
  • Evolutionary Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Theoretical Computer Science (AREA)
  • Bioethics (AREA)
  • Artificial Intelligence (AREA)
  • Computer Vision & Pattern Recognition (AREA)
  • Databases & Information Systems (AREA)
  • Epidemiology (AREA)
  • Evolutionary Computation (AREA)
  • Public Health (AREA)
  • Software Systems (AREA)
  • Management, Administration, Business Operations System, And Electronic Commerce (AREA)
  • Information Retrieval, Db Structures And Fs Structures Therefor (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
PCT/JP2000/006385 2000-09-19 2000-09-19 Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet WO2002025489A1 (fr)

Priority Applications (4)

Application Number Priority Date Filing Date Title
PCT/JP2000/006385 WO2002025489A1 (fr) 2000-09-19 2000-09-19 Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet
JP2002529422A JP3532911B2 (ja) 2000-09-19 2000-09-19 遺伝子データ表示方法及び記録媒体
US10/129,251 US7127354B1 (en) 2000-09-19 2000-09-19 Method of displaying gene data, and recording medium
EP00961085A EP1321858A4 (en) 2000-09-19 2000-09-19 GENETIC DATA DISPLAY TECHNIQUE AND RECORDING MEDIUM THEREFOR

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/JP2000/006385 WO2002025489A1 (fr) 2000-09-19 2000-09-19 Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet

Publications (1)

Publication Number Publication Date
WO2002025489A1 true WO2002025489A1 (fr) 2002-03-28

Family

ID=11736468

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/JP2000/006385 WO2002025489A1 (fr) 2000-09-19 2000-09-19 Technique d'affichage de donnees genetiques et support d'enregistrement a cet effet

Country Status (4)

Country Link
US (1) US7127354B1 (ja)
EP (1) EP1321858A4 (ja)
JP (1) JP3532911B2 (ja)
WO (1) WO2002025489A1 (ja)

Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003042780A2 (en) * 2001-11-09 2003-05-22 Gene Logic Inc. System and method for storage and analysis of gene expression data
EP1742161A1 (en) 2005-07-04 2007-01-10 Fujitsu Limited Method, system and computer program for expression data analysis
JP2007207113A (ja) * 2006-02-03 2007-08-16 Hitachi Software Eng Co Ltd 系統樹表示システム
JP2007312653A (ja) * 2006-05-24 2007-12-06 Nec Soft Ltd 時系列遺伝子発現量データの特徴抽出と比較分類を目的とする解析方法、および該解析方法に基づく解析装置
WO2016068245A1 (ja) * 2014-10-30 2016-05-06 株式会社 東芝 遺伝子型推定装置、方法、及びプログラム

Families Citing this family (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US20050027729A1 (en) * 2002-05-22 2005-02-03 Allan Kuchinsky System and methods for visualizing and manipulating multiple data values with graphical views of biological relationships
JP5286594B2 (ja) * 2009-03-16 2013-09-11 学校法人明治大学 発現プロファイル解析システム及びそのプログラム
US20110078194A1 (en) * 2009-09-28 2011-03-31 Oracle International Corporation Sequential information retrieval
US10013641B2 (en) * 2009-09-28 2018-07-03 Oracle International Corporation Interactive dendrogram controls
US10552710B2 (en) * 2009-09-28 2020-02-04 Oracle International Corporation Hierarchical sequential clustering
CA2740334C (en) 2010-05-14 2015-12-08 National Research Council Order-preserving clustering data analysis system and method
SG10201503755QA (en) * 2015-05-13 2016-12-29 Dataesp Private Ltd Searching large data space for statistically significant patterns

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5598350A (en) * 1993-11-12 1997-01-28 Fujitsu Limited Genetic motif extracting method and apparatus

Family Cites Families (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP3353263B2 (ja) * 1993-11-12 2002-12-03 国立遺伝学研究所長 遺伝子のモチーフ抽出処理装置及び処理方法

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5598350A (en) * 1993-11-12 1997-01-28 Fujitsu Limited Genetic motif extracting method and apparatus

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
ROSS D.T. ET AL.: "Systematic variation in gene expression patterns in human cancer cell lines", NATURE GENETICS, vol. 24, no. 3, 10 March 2000 (2000-03-10), pages 227 - 235, XP002933374 *
See also references of EP1321858A4 *

Cited By (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2003042780A2 (en) * 2001-11-09 2003-05-22 Gene Logic Inc. System and method for storage and analysis of gene expression data
WO2003042780A3 (en) * 2001-11-09 2003-08-28 Gene Logic Inc System and method for storage and analysis of gene expression data
EP1742161A1 (en) 2005-07-04 2007-01-10 Fujitsu Limited Method, system and computer program for expression data analysis
JP2007207113A (ja) * 2006-02-03 2007-08-16 Hitachi Software Eng Co Ltd 系統樹表示システム
JP2007312653A (ja) * 2006-05-24 2007-12-06 Nec Soft Ltd 時系列遺伝子発現量データの特徴抽出と比較分類を目的とする解析方法、および該解析方法に基づく解析装置
JP4555256B2 (ja) * 2006-05-24 2010-09-29 Ｎｅｃソフト株式会社 時系列遺伝子発現量データの特徴抽出と比較分類を目的とする解析方法、および該解析方法に基づく解析装置
WO2016068245A1 (ja) * 2014-10-30 2016-05-06 株式会社 東芝 遺伝子型推定装置、方法、及びプログラム
JPWO2016068245A1 (ja) * 2014-10-30 2017-06-08 株式会社東芝 遺伝子型推定装置、方法、及びプログラム
US11355219B2 (en) 2014-10-30 2022-06-07 Kabushiki Kaisha Toshiba Genotype estimation device, method, and program

Also Published As

Publication number Publication date
US7127354B1 (en) 2006-10-24
JP3532911B2 (ja) 2004-05-31
EP1321858A4 (en) 2005-06-01
JPWO2002025489A1 (ja) 2004-01-29
EP1321858A1 (en) 2003-06-25

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