WO2001072787A1 - A novel polypeptide-human peroxidosome assembly factor 10 and the polynucleotide encoding said polypeptide - Google Patents

A novel polypeptide-human peroxidosome assembly factor 10 and the polynucleotide encoding said polypeptide Download PDF

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Publication number
WO2001072787A1
WO2001072787A1 PCT/CN2001/000333 CN0100333W WO0172787A1 WO 2001072787 A1 WO2001072787 A1 WO 2001072787A1 CN 0100333 W CN0100333 W CN 0100333W WO 0172787 A1 WO0172787 A1 WO 0172787A1
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polypeptide
polynucleotide
assembly factor
human peroxisome
peroxisome assembly
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PCT/CN2001/000333
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French (fr)
Chinese (zh)
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Yumin Mao
Yi Xie
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Biowindow Gene Development Inc. Shanghai
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Priority to AU46348/01A priority Critical patent/AU4634801A/en
Publication of WO2001072787A1 publication Critical patent/WO2001072787A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/46Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates
    • C07K14/47Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans from vertebrates from mammals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Definitions

  • the present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, a human peroxisome assembly factor-10, and a polynucleotide sequence encoding the polypeptide. The invention also relates to methods and applications for preparing such polynucleotides and polypeptides. Background technique
  • Peroxisomes also called microsomes, are organelles containing one or more oxidases surrounded by a single membrane. Peroxisome is a heterogeneous organelle. The types of enzymes and the functions they perform are different in the cells of different organisms and even in different individuals of single-celled organisms. Peroxisomes in animal cells are in liver cells or kidney cells. It can oxidize and break down toxic components in the blood and play a detoxifying role. For example, almost half of the alcohol consumed is oxidized to acetaldehyde in the peroxisome. of.
  • Peroxisomes often contain two enzymes: one is an oxidase that depends on flavin (FAD), and its role is to oxidize the substrate to form H 2 0 2 ; the other is catalase, whose content often accounts for over 40% of the total protein content of the oxidant body, its role is to break down H 2 0 2 to form water and oxygen.
  • the reactions catalyzed by these two enzymes are tightly coupled to protect cells from H 2 0 2 poisoning.
  • Peroxisomes can degrade biological macromolecules, eventually producing H 2 0 2 , and most of these reactions can also be performed in other organelles, and do not produce H 2 0 2 , so its other function is to decompose fatty acids, etc.
  • High-energy molecules provide thermal energy directly to the cells, without having to obtain thermal energy by hydrolyzing ATP.
  • Peroxisome assembly factor-1 is a membrane integrin of peroxisome, and plays an important role in the assembly of peroxisome.
  • the mammalian peroxisome assembly factor-1 (PAF-1) is highly homologous and both contain two extremely conserved sequences, namely two transmembrane fragments, with seven conserved cystes in the C00H-terminal region. Amino acid residues.
  • the two transmembrane domains of PAF-1 play a role in localizing PAF-1 as a membrane integrin in the peroxisome (Nobuyuki Sh imozawa e t al., Science 255, 1132 (1992)).
  • PAF-1 peroxisome assembly factor-1
  • This disease is A lethal autosomal recessive disease with clinical symptoms of severe neurological abnormalities, various abnormalities, hepatomegaly, and multiple renal cysts (EAC Wiemer et al., Eur. J. Ce ll Biol. 50, 407 (1989) ).
  • the human peroxisome assembly factor-10 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so the identification of Many human peroxisome assembly factor-10 proteins are involved in these processes, especially the amino acid sequence of this protein is identified.
  • the isolation of the new human peroxisome assembly factor-10 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic agents for diseases, so it is important to isolate its coding for DM. Disclosure of invention
  • Another object of the invention is to provide a polynucleotide encoding the polypeptide.
  • Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human peroxisome assembly factor-10.
  • Another object of the present invention is to provide a method for producing human peroxisome assembly factor-10.
  • Another object of the present invention is to provide an antibody against the human peroxisome assembly factor-10 of the polypeptide of the present invention.
  • Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors of the peroxisome assembly factor-10 of the polypeptide of the present invention.
  • Another object of the present invention is to provide a method for diagnosing and treating diseases related to abnormalities of human peroxisome assembly factor-10.
  • the present invention relates to an isolated polypeptide.
  • the polypeptide is of human origin and comprises: SEQ ID No. 2 Amino acid sequence of peptides, or conservative variants, biologically active fragments or derivatives thereof.
  • the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
  • sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 119-397 in SEQ ID NO: 1; and (b) a sequence having 1-2567 in SEQ ID NO: 1 Sequence of bits.
  • the present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
  • the invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
  • the invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of the human peroxisome assembly factor-10 protein, which comprises utilizing the polypeptide of the invention.
  • the invention also relates to compounds obtained by this method.
  • the invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of the human peroxisome assembly factor-10 protein, which comprises detecting a mutation in the polypeptide or a polynucleotide sequence encoding the same in a biological sample. Or detecting the amount or biological activity of a polypeptide of the invention in a biological sample.
  • the invention also relates to a pharmaceutical composition
  • a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
  • the present invention also relates to the preparation of the polypeptide and / or polynucleotide of the present invention for the treatment of Ze l lweger syndrome, neonatal adrenal white matter dystrophy, polyneuritis hereditary ataxia in infants and young children, Polyacidemia, other embryonic developmental disorders, growth disorders, substance metabolism disorders, various tumors, inflammation, immune diseases, HIV infection, or other abnormalities due to abnormal expression of human peroxisome assembly factor-10 Use of drugs that cause disease.
  • Nucleic acid sequence refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand.
  • amino acid sequence refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof Minute.
  • amino acid sequence in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide” or “protein” does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
  • a “variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it.
  • the changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence.
  • Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine.
  • Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
  • “Deletion” refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
  • Insertion refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule.
  • Replacement refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
  • Bioactivity refers to a protein that has the structure, regulation, or biochemical function of a natural molecule.
  • immunologically active refers to the ability of natural, recombinant or synthetic proteins and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
  • An "agonist” refers to a molecule that, when combined with human peroxisome assembly factor-10, causes a change in the protein to regulate the activity of the protein.
  • An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind to the human peroxisome assembly factor-10.
  • Antagonist refers to a biological activity or immunity that can block or regulate human peroxisome assembly factor-10 when combined with human peroxisome assembly factor-10.
  • Chemically active molecules may include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to the human peroxisome assembly factor-10.
  • Regular refers to a change in the function of human peroxisome assembly factor-10, including an increase or decrease in protein activity, a change in binding characteristics, and any other organism of human peroxisome assembly factor-10 Changes in nature, function, or immunity.
  • Substantially pure 1 'means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated.
  • Those skilled in the art can purify human peroxisome assembly factors using standard protein purification techniques- 10. Basically pure human peroxisome assembly factor-10 produces a single main band on a non-reducing polyacrylamide gel. The purity of human peroxisome assembly factor-10 polypeptide can be analyzed by amino acid sequence .
  • Complementary refers to polynucleotides that naturally bind through base-pairing under conditions of acceptable salt concentration and temperature.
  • sequence "C-TG-A” can be combined with the complementary sequence "GA-CT”.
  • the complementarity between two single-stranded molecules may be partial or complete.
  • the degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
  • “Homology” refers to the degree of complementarity and can be partially homologous or completely homologous.
  • Partial homology refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Nor thern blotting, etc.) under conditions of reduced stringency.
  • Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require that the two sequences bind to each other as either specific or selective interactions.
  • Percent identity refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Higg ins, DG and PM Sharp (1988) Gene 73: 237-244). 0 The C lus ter method will check the distance between all pairs by Groups of sequences are arranged in clusters. The clusters are then assigned in pairs or groups.
  • the percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence X 100 The number of residues in sequence A-the number of spacer residues in sequence A The number of spacer residues in a sequence B can also be determined by Clus ter method or using methods known in the art such as Jotun Hein.
  • the percent identity between nucleic acid sequences (Hein J., (1990) Methods in emzumology 183: 625-645)tician" Similarity "refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment between amino acid sequences. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid.
  • Amino acids; positively charged amino acids may include lysine and arginine; amino acids with similarly charged head groups that have similar hydrophilicity may include leucine, isoleucine, and valine; glycine And alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
  • Antisense refers to a nucleotide sequence that is complementary to a particular DM or RNA sequence.
  • Antisense strand refers to a nucleic acid strand that is complementary to a “sense strand.”
  • Derivative refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives encode major organisms that retain natural molecules Peptides with chemical properties.
  • Antibody refers to a complete antibody molecule and its fragments, such as Fa,? ( ⁇ ') 2 and? , It can specifically bind to the epitope of human peroxisome assembly factor-10.
  • a “humanized antibody” refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
  • isolated refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring).
  • a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system.
  • Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
  • isolated refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment).
  • polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
  • isolated human peroxisome assembly factor-10 refers to human peroxisome assembly factor-10, which is substantially free of other proteins, lipids, carbohydrates, or other substances naturally associated with it. Those skilled in the art can purify human peroxisome assembly factors using standard protein purification techniques-
  • Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel.
  • the purity of the human peroxisome assembly factor-10 polypeptide can be analyzed by amino acid sequence.
  • the present invention provides a new polypeptide, human peroxisome assembly factor-10, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2.
  • the polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide.
  • the polypeptides of the present invention can be naturally purified products, or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
  • the invention also includes fragments, derivatives and analogs of human peroxisome assembly factor-10.
  • fragment refers to a polypeptide that substantially maintains the same biological function or activity of the human peroxisome assembly factor-10 of the present invention.
  • a fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution of The amino acid may or may not be encoded by the genetic code; or (II) such a type in which a group on one or more amino acid residues is substituted by another group to include a substituent; or (III) such a Species, wherein the mature polypeptide is fused with another compound (such as a compound that extends the half-life of the polypeptide, such as polyethylene glycol); or (IV) a polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide (such as Leader sequences or secreted sequences or sequences used to purify this polypeptide or protease sequences) As set forth herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
  • the present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2.
  • the polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1.
  • the polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 2567 bases in length and its open reading frame 119-397 encodes 92 amino acids. According to the comparison of gene chip expression profiles, it was found that this peptide has a similar expression profile to human peroxisome assembly factor-1, and it can be inferred that the human peroxisome assembly factor-10 has human peroxisome assembly factor -1 similar functionality.
  • the polynucleotide of the present invention may be in the form of DM or RNA.
  • DNA forms include cDM, genomic DNA, or synthetic DM.
  • DNA can be single-stranded or double-stranded.
  • DNA can be coding or non-coding.
  • the coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant.
  • a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 in the present invention, but which differs from the coding region sequence shown in SEQ ID NO: 1.
  • the polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
  • polynucleotide encoding a polypeptide refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
  • the invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention.
  • Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants.
  • an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
  • the present invention also relates to a polynucleotide that hybridizes to a sequence described above 50% less, preferably 70% identity).
  • the invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions.
  • “strict conditions” means: a) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) hybridization When using denaturants, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% F i co ll, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%.
  • the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
  • nucleic acid fragments that hybridize to the sequences described above.
  • a "nucleic acid fragment” contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, most preferably at least 100 nucleotides. Nucleotides or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques (such as PCR) to identify and / or isolate polynucleotide acids encoding human peroxisome assembly factor-10.
  • polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity.
  • the specific polynucleotide sequence encoding the human peroxisome assembly factor-10 of the present invention can be obtained by various methods.
  • polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
  • the DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolation of double-stranded DNA sequence from genomic DM; '2) chemical synthesis of DNA sequence to obtain double-stranded DNA of said polypeptide.
  • genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the separation of cDM sequences.
  • the standard method for isolating the cDNA of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library.
  • mRM plasmid or phage cDNA library.
  • kits are also commercially available (Qi agene;).
  • construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua, Coll Spring Harbor Labora tory. New York, 1989).
  • Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
  • the genes of the present invention can be screened from these CDM libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of the transcript of human peroxisome assembly factor-10 Level; (4) detecting protein products of gene expression by immunological techniques or measuring biological activity. The above methods can be used singly or in combination.
  • the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides.
  • the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides.
  • the probe used herein is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention.
  • the genes or fragments of the present invention can of course be used as probes.
  • DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
  • the protein product of human peroxisome assembly factor-10 gene expression can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
  • the RACE method RACE-cDM terminal rapid amplification method
  • the primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein.
  • the amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
  • polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
  • the present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using a human peroxisome assembly factor-10 coding sequence, and recombinant technology to produce the Said method of polypeptide.
  • a polynucleotide sequence encoding human peroxisome assembly factor-10 can be inserted into a vector to form a recombinant vector containing the polynucleotide of the present invention.
  • vector refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art.
  • Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al.
  • any plasmid and vector can be used to construct a recombinant expression vector.
  • An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements. Methods known to those skilled in the art can be used to construct an assembly factor containing human peroxisome-
  • DNA sequences and expression vectors with appropriate transcriptional / translational regulatory elements include in vitro shuffling DM technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Laboratory Manua l, cold Harbor Labora tory. New York, 1989).
  • the DNA sequence can be operably linked to an appropriate promoter in the expression vector to guide the synthesis of raRNA. Representative examples of these promoters are: E.
  • the expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Examples include 100 to 270 base pair SV40 enhancers on the late side of the origin of replication, polyoma enhancers and adenovirus enhancers on the late side of the origin of replication.
  • the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture.
  • GFP fluorescent protein
  • tetracycline or ampicillin resistance for E. coli.
  • a polynucleotide encoding human peroxisome assembly factor-10 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to constitute a genetic engineering containing the polynucleotide or the recombinant vector.
  • Host cell refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell.
  • Escherichia coli, Streptomyces bacterial cells such as Salmonella typhimurium
  • fungal cells such as yeast
  • plant cells insect cells
  • fly S2 or Sf9 animal cells
  • animal cells such as CH0, COS or Bowes melanoma cells.
  • Transformation of a host cell with a DNA sequence according to the present invention or a recombinant vector containing the DM sequence can be performed using conventional techniques well known to those skilled in the art.
  • the host is a prokaryote, such as E. coli
  • competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with the CaCl 2 method.
  • the steps used are well known in the art.
  • the alternative is to use MgC l 2 .
  • transformation can also be performed by electroporation.
  • the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
  • the polynucleotide sequence of the present invention can be used for expression or production Recombinant human peroxisome assembly factor-10 (Sc ience, 1984; 224: 1431). Generally there are the following steps:
  • the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
  • a suitable method such as temperature conversion or chemical induction
  • the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell.
  • recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods.
  • conventional renaturation treatment protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography
  • Fig. 1 is a comparison diagram of gene chip expression profiles of the inventor's peroxisome assembly factor-10 and the human peroxisome assembly factor-1.
  • the upper graph is a graph of the expression profile of the human peroxisome assembly factor -10, and the lower graph is the graph of the expression profile of the human peroxisome assembly factor -1.
  • Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human peroxisome assembly factor-10.
  • OKDa is the molecular weight of the protein.
  • the arrow indicates the isolated protein band.
  • RNA Human fetal brain total RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform.
  • Poly (A) mRNA was isolated from total RNA using Quik mRNA Isolat ion Kit (product of Qiegene). 2ug poly (A) mRNA is reverse transcribed to form cDNA.
  • the Smart cDNA cloning kit purchased from Clontech
  • the bacteria formed a cDNA library.
  • Dye terminate cycle reaction ion sequencing kit Perkin-Elmer
  • ABI 377 automatic sequencer Perkin-Elmer
  • the determined cDNA sequence was compared with the existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0653g05 was new DNA.
  • the inserted cDNA fragment contained in this clone was determined in both directions by synthesizing a series of primers.
  • the 0653g05 clone contains a full-length cDNA of 2567bp (as shown in Seq ID NO: 1), and has a 279bp open reading frame (0RF) from 119bp to 397bp, encoding a new protein (such as Seq ID NO : Shown in 2).
  • This clone pBS-0653g05 and the encoded protein was named human peroxisome assembly factor-10.
  • Example 2 Cloning of a gene encoding human peroxisome assembly factor-10 by RT-PCR
  • CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
  • Pr imerl 5'- GGAGGTTCCCACTATGAGCCCGGA -3 '(SEQ ID NO: 3)
  • Pr imer2 5'- TGTAAAATAATGTATTTTTATTCA -3, (SEQ ID NO: 4)
  • Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
  • Pr imer2 is the 3'-end reverse sequence in SEQ ID NO: 1.
  • Amplification conditions 50 ⁇ l of KC1, 10 mmol / L Tris-Cl, (pH 8.5.5), 1.5 ⁇ g / 1/1 MgCl 2 , 200 ⁇ mol in a reaction volume of 50 ⁇ 1 / L dNTP, l Opmol primer, 1U Taq DNA polymerase (Clontech). 25 cycles were performed on a PB9600 DNA thermal cycler (Perkin-Elmer) under the following conditions: 94 ° C 30sec; 55. C 30sec; 72. For C 2min 0 , ⁇ -act in was used as a positive control and template blank was used as a negative control at the same time during RT-PCR.
  • the amplified product was purified using a QIAGEN kit, and ligated to a pCR vector (Invitrogen) using a TA cloning kit. DNA sequence analysis results showed that the DM sequence of the PCR product was exactly the same as that of 1-2567bp shown in SEQ ID NO: 1.
  • Example 3 Northern blot analysis of human peroxisome assembly factor-10 gene expression:
  • Electrophoresis was performed on a 1.2% agarose gel containing 2 mM ⁇ ⁇ ⁇ containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7.0)-5 mM sodium acetate-1 mM EDTA-2.2M formaldehyde. It was then transferred to a nitrocellulose membrane.
  • the DNA probe used was the PCR amplified human peroxisome assembly factor-10 coding region sequence (119bp to 397bp) shown in FIG. 1.
  • a 32P-labeled probe (approximately 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH 7.4) -5 x SSC-5 x Denhardt's solution and 200 ⁇ g / ml salmon sperm DNA. After hybridization, the filter was washed in 1x SSC-G.1% SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification.
  • Example 4 In vitro expression, isolation and purification of recombinant human peroxisome assembly factor-10
  • Primer3 5'- CATGCTAGCATGTGGTACATATACAAAATGGAG -3, (Seq ID No: 5)
  • Primer4 5'- CCCGAATTCTCAGGAGCAGTCCTCTTTTATTATT -3 '(Seq ID No: 6)
  • the 5' ends of these two primers contain Nhel and EcoRI restriction sites, respectively.
  • the coding sequences of the 5 'and 3 ' ends of the gene of interest are followed, respectively.
  • the Nhel and EcoRI restriction sites correspond to the selectivity within the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865.3). Digestion site.
  • the pBS-0653g05 plasmid containing the full-length target gene was used as a template for the PCR reaction.
  • the PCR reaction conditions are as follows: a total volume of 50 ⁇ 1 contains 10 pg of pBS-0653g05 plasmid, primers? 1 ⁇ 11161: -3 and? 1 ⁇ 1116]: -4 points and 1
  • the host strain BL21 (pET-0653g05) was at 37 ° C. Cultivate to the logarithmic growth phase, add IPTG to a final concentration of 1 ol / L, and continue the cultivation for 5 hours. Centrifuge the bacterial cells to collect them by centrifugation, sonicate, and collect the supernatant by centrifugation with 6 histidine (6His-Tag ) Binding affinity chromatography column His. Bind Quick Cartridge (product of Novagen company) The purified human protein peroxisome assembly factor-10 was obtained.
  • a peptide synthesizer (product of PE company) was used to synthesize the following human peroxisome assembly factor-10 specific peptides:
  • ELISA Use a titration plate coated with 15 g / ml bovine serum albumin peptide complex for ELISA to determine the antibody in rabbit serum. Isolate total IgG from antibody-positive rabbit serum with protein A-Sepharose. Bind the peptide to a cyanogen bromide-activated Sepha r0Se 4B column and isolate anti-peptide antibodies from the total IgG by affinity chromatography The immunoprecipitation method proved that the purified antibody can specifically bind to human peroxisome assembly factor-10.
  • Example 6 Application of the polynucleotide fragment of the present invention as a hybridization probe
  • Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways.
  • the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected.
  • the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
  • the purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method.
  • Filter hybridization methods include dot blotting, Southern blotting, Northern blotting, and copying methods. They all use the same steps of hybridization after fixing the polynucleotide sample to be tested on the filter.
  • the sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer, so that the non-specific binding site of the sample on the filter is saturated with the carrier and the synthetic polymer.
  • the pre-hybridization solution is then replaced with a hybridization buffer containing the labeled probe and incubated to hybridize the probe to the target nucleic acid.
  • the unhybridized probes are removed by a series of membrane washing steps.
  • This embodiment utilizes higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals.
  • the probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention
  • the polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment.
  • the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained. First, the selection of the probe
  • oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
  • the preferred range of probe size is 18-50 nucleotides
  • Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
  • Probe 1 which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
  • Probe 2 (probe2), which belongs to the second type of probe, is equivalent to the replacement mutant sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
  • step 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
  • NC membrane nitrocellulose membrane
  • the sample film was placed in a plastic bag pre-hybridization solution was added 3-10m g (10xDenhardt's;. 6xSSC, 0. lmg / ral CT DNA (the DNA calf thymus)), after a good seal bag 68.
  • Gene chip or gene microarray is a new technology currently being developed by many national laboratories and large pharmaceutical companies.
  • the data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information.
  • the polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases .
  • the specific method steps have been reported in the literature. For example, refer to the literature DeRi si, JL, Lyer, V. & Brown, P. 0. (1997) Sc ience 278, 680-686. And the literature Hel le, RA, Schema , M., Cha i, A., Shalom, D., (1997) PNAS 94: 2150-2155.
  • a total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotide of the present invention. They were amplified by PCR respectively. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a glass medium with a Cartesian 7500 spotter (purchased from Cartesian Company, USA). The distance between them is 280 ⁇ m. The spotted slides were hydrated, dried, and cross-linked in a UV cross-linking instrument. After elution, the DNA was fixed on the glass slide to prepare a chip. The specific method steps have been variously reported in the literature. The post-spotting processing steps of this embodiment are:
  • the total mRNA was extracted from the human mixed tissue and specific tissues (or stimulated cell lines) of the body in one step, and the mRNA was purified using Ol igotex mRNA Midi Kit (purchased from QiaGen).
  • the fluorescent reagent Cy 3dUTP (5-Amino-propargy 1-2 '-deoxyur idine 5'-tr iphate coupled to Cy3 f luorescent dye, purchased from Amersham Phamacia Biotech) was used to label mRNA of human mixed tissue, and the fluorescent reagent Cy5dUTP ( 5- Amino- propargyl- 2 '-deoxyur idine 5' -tr iphate coupled to Cy5 f luorescent dye (purchased from Amersham Phamac ia Biotech) to label the mRNA of specific tissues (or stimulated cell lines) of the body and prepare them after purification Probe.
  • Cy 3dUTP 5-Amino-propargy 1-2 '-de
  • Solut ion (purchased from TeleChem) was used for hybridization for 16 hours, and then washed with a washing solution (1 x SSC, 0.2% SDS) at room temperature, and then scanned with a ScanArray 3000 scanner (purchased from General Scanning, USA). The image was processed by Imagene software (Biodi scovery Company, USA) to calculate the Cy3 / Cy5 ratio of each point.
  • the above specific tissues are thymus, testis, muscle, spleen, lung, skin, thyroid, liver, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, Arsenic stimulated the L02 cell line and prostate tissue for 1 hour. Based on these 13 Cy3 / Cy5 ratios, a bar graph is drawn. (figure 1 ) . It can be seen from the figure that the expression profile of human peroxisome assembly factor-10 and human peroxisome assembly factor-1 according to the present invention are very similar. Industrial applicability
  • polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases, etc. .
  • Peroxisomes are organelles containing one or more oxidases surrounded by a single membrane. Peroxisomes in animal cells are in liver cells or kidney cells, which can oxidize and break down toxic components in the blood, and play a detoxifying role, such as breaking down alcohol. Peroxisomes can also break down high-energy molecules such as fatty acids. Cells provide heat directly and have an effect on glycogenogenesis.
  • Peroxisome assembly factor-1 (PAF-1) is a membrane integrin of peroxisome, which plays an important role in the assembly process of peroxisome.
  • PAF-1 peroxisome assembly factor-1
  • ⁇ -oxidation of peroxidase and defects in plasmalogen biosynthesis which cause various diseases, such as Zel lweger syndrome, neonatal adrenal white matter malnutrition, polyneuritis hereditary dyskinesia in infants and young children, and hexahydrogen
  • diseases such as Zel lweger syndrome, neonatal adrenal white matter malnutrition, polyneuritis hereditary dyskinesia in infants and young children, and hexahydrogen
  • the expression profile of the polypeptide of the present invention is consistent with the expression profile of human peroxisome assembly factor-1, and the two have similar biological functions. It is involved in lipid metabolism, glycogenogenesis in the body, and is important for detoxification of the body. Its abnormal expression is usually related to some metabolic disorders such as Ze l lweger syndrome, neonatal adrenal white matter dystrophy, polyneuritis hereditary ataxia in infants and young children, hexahydropyridinecarboxylic acid hyperacidemia, And the occurrence of tumors in related tissues is closely related and produces related diseases.
  • human peroxisome assembly factor-10 of the present invention will produce various diseases, especially Zel lweger syndrome, neonatal adrenal white matter dystrophy, and polyneuropathy in infants and young children.
  • Hexahydropyridinecarboxylic acid hyperacidemia other embryonic developmental disorders, disorders of growth and development, disorders of material metabolism, various tumors, inflammation, immune diseases, these diseases include but are not limited to:
  • Fetal developmental disorders congenital abortion, cleft palate, limb loss, limb differentiation disorder, hyaline membrane disease, atelectasis, polycystic kidney, cryptorchidism, congenital inguinal hernia, double uterus, vaginal atresia, hypospadias, androgynous Malformation, Atrial septal defect, Ventricular septal defect, Pulmonary stenosis, Arterial duct occlusion, Neural tube defect, Congenital hydrocephalus, Iris defect, Congenital glaucoma or cataract, Congenital deafness Growth and development disorders: Mental retardation, Brain development disorders, skin, fat and muscular dysplasia, bone and joint dysplasia, various metabolic defects, stunting, dwarfism, Cushing syndrome, sexual retardation
  • Material metabolism disorders isovalerate, propionate, methylmalonic aciduria, combined carboxylase deficiency, glutarate type I, phenylketonuria, albinism, galactosemia, Defective fructose metabolism, glycogen storage disease
  • Tumors of various tissues gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine fibroids, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Neurofibromas, colon cancer, melanoma, bladder cancer, uterine cancer, endometrial cancer, colon cancer, thymic tumor, nasopharyngeal cancer, laryngeal cancer, tracheal tumor, fibroma, fibrosarcoma, lipoma, liposarcoma inflammation: Chronic active hepatitis, sarcoidosis, polymyositis, chronic rhinitis, chronic gastritis, cerebrospinal multiple sclerosis, glomerulonephritis, myocarditis, cardiomyopathy, atherosclerosis, gastric ulcer, cervicitis, various Infectious inflammation
  • Immune diseases Systemic lupus erythematosus, rheumatoid arthritis, bronchial asthma, urticaria, specific dermatitis, post-infection myocarditis, scleroderma, myasthenia gravis, Guillain-Barre syndrome, common variable immunodeficiency disease , Primary B-lymphocyte immunodeficiency disease, Acquired immunodeficiency syndrome
  • the polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat various diseases, especially Zel lweger syndrome, neonatal adrenal white matter malnutrition, and polyneuritis in infants and young children.
  • the invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human peroxisome assembly factor-10.
  • Agonists enhance human peroxisome assembly factor-10 to stimulate biological functions such as cell proliferation, while antagonists prevent and treat disorders related to cell proliferation, such as various cancers.
  • mammalian cells or membrane preparations expressing human peroxisome assembly factor -10 can be cultured together with labeled human peroxisome assembly factor -10 in the presence of drugs. The ability of the drug to increase or block this interaction is then determined.
  • Antagonists of human peroxisome assembly factor-10 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human peroxisome assembly factor-10 can bind to human peroxisome assembly factor-10 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that The polypeptide cannot perform biological functions.
  • human peroxisome assembly factor-10 When screening compounds as antagonists, human peroxisome assembly factor-10 can be added to bioanalytical assays by determining the compound's effect on the interaction between human peroxisome assembly factor-10 and its receptors. Influence to determine if a compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds. Polypeptide molecules capable of binding to human peroxisome assembly factor-10 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. In screening, the human peroxisome assembly factor-10 molecule should generally be labeled.
  • the present invention provides polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. To produce antibodies. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human peroxisome assembly factor-10 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
  • Polyclonal antibodies can be produced by injecting human peroxisome assembly factor-10 directly into immunized animals (such as rabbits, mice, rats, etc.).
  • immunized animals such as rabbits, mice, rats, etc.
  • adjuvants can be used to enhance the immune response, including but not Limited to Freund's adjuvant and the like.
  • Techniques for preparing monoclonal antibodies to human peroxisome assembly factor-10 include, but are not limited to, hybridoma technology (Kohler and Miles in. Nature, 1975, 256: 495-497), triple tumor technology, human beta -Cell hybridoma technology, EBV-hybridoma technology, etc.
  • Chimeric antibodies that combine human constant regions with non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851) and existing techniques for producing single-chain antibodies (US Pa t No. 4946778) can also be used to produce single chain antibodies against human peroxisome assembly factor-10.
  • Antibodies against human peroxisome assembly factor -10 can be used in immunohistochemistry to detect human peroxisome assembly factor-10 in biopsy specimens.
  • Monoclonal antibodies that bind to human peroxisome assembly factor-10 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
  • Antibodies can also be used to design immunotoxins that target a particular part of the body.
  • human peroxisome assembly factor-10 high affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.).
  • a common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds.
  • This hybrid antibody can be used to kill the human peroxisome assembly factor- 10 positive cells.
  • the antibodies of the present invention can be used to treat or prevent diseases related to human peroxisome assembly factor-10.
  • Administration of an appropriate dose of antibody can stimulate or block the production or activity of human peroxisome assembly factor-10.
  • the invention also relates to a diagnostic test method for quantitative and localized detection of human peroxisome assembly factor-10 levels. These tests are well known in the art and include FISH assays and radioimmunoassays. The level of human peroxisome assembly factor-10 detected in the test can be used to explain the importance of human peroxisome assembly factor-10 in various diseases and to diagnose human peroxisome assembly Factor-10 disease.
  • polypeptide of the present invention can also be used for peptide mapping analysis.
  • the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. Analysis.
  • human peroxisome assembly factor-10 can also be used for a variety of therapeutic purposes.
  • Gene therapy technology can be used to treat abnormal cell proliferation, development, or metabolism caused by the non-expression or abnormal / inactive expression of human peroxisome assembly factor-10.
  • Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human peroxisome assembly factor -10 to inhibit endogenous human peroxisome assembly factor -10 activity.
  • a mutated human peroxisome assembly factor-10 may be a shortened human peroxisome assembly factor-10 that lacks a signaling domain, although it can bind to downstream substrates, but Lack of signaling activity.
  • the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human peroxisome assembly factor-10.
  • Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer a polynucleotide encoding human peroxisome assembly factor-10 into cells.
  • Methods for constructing recombinant viral vectors carrying a polynucleotide encoding human peroxisome assembly factor-10 can be found in the literature (Sambrook, et al.).
  • a recombinant polynucleotide encoding human peroxisome assembly factor-10 can be packaged into liposomes and transferred into cells.
  • Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
  • a vector such as a virus, phage, or plasmid
  • Oligonucleotides including antisense RM and DNA
  • ribozymes that inhibit human peroxisome assembly factor-10 mRNA are also within the scope of the present invention.
  • a ribozyme is an enzyme-like RNA molecule that specifically decomposes a specific MA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RM to perform endonucleation.
  • Antisense RNA, DNA, and ribozymes can be obtained using any existing RNA or DNA synthesis technology, such as solid-phase phosphoramidite chemical synthesis to synthesize oligonucleotides.
  • Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA.
  • This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter.
  • it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
  • the polynucleotide encoding human peroxisome assembly factor-10 can be used for the diagnosis of diseases related to human peroxisome assembly factor-10.
  • the polynucleotide encoding human peroxisome assembly factor-10 can be used to detect the expression of human peroxisome assembly factor-10 or the abnormality of human peroxisome assembly factor-10 in a disease state. expression.
  • the DM sequence encoding human peroxisome assembly factor-10 can be used to hybridize biopsy specimens to determine the expression of human peroxisome assembly factor-10.
  • Hybridization techniques include Southern blotting, Nor thern blotting, in situ hybridization, and the like. These technical methods Both are publicly available mature technologies and related kits are commercially available.
  • polynucleotides of the present invention can be used as probes to be fixed on a microarray or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues.
  • Human peroxisome assembly factor-10 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human peroxisome assembly factor-10 transcription products.
  • Detection of mutations in the human peroxisome assembly factor-10 gene can also be used to diagnose human peroxisome assembly factor-10-related diseases.
  • Human peroxisome assembly factor-10 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human peroxisome assembly factor-10 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
  • the sequences of the invention are also valuable for chromosome identification.
  • the sequence specifically targets a specific position on a human chromosome and can hybridize to it.
  • specific sites for each gene on the chromosome need to be identified.
  • only a few chromosome markers based on actual sequence data are available for marking chromosome positions.
  • an important first step is to locate these DNA sequences on a chromosome.
  • PCR primers (preferably 15-35bp) are prepared based on cDNA, and the sequences can be located on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
  • PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes.
  • oligonucleotide primers of the present invention in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization.
  • Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
  • Fluorescent in situ hybridization of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step.
  • FISH Fluorescent in situ hybridization
  • the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendeliaia Inheritance in Man (available online with Johns Hopkins University Wetch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that are mapped to chromosomal regions. Next, the CDM or genomic sequence differences between the affected and unaffected individuals need to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease.
  • Comparing affected and unaffected individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable using cDNA sequence-based PCR.
  • the cDNA accurately mapped to the disease-related chromosomal region can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping) Resolving power and each 20kb corresponds to a gene).
  • the polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier.
  • suitable pharmaceutical carrier can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof.
  • the composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
  • the invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention.
  • these containers there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell.
  • the polypeptides of the invention can be used in combination with other therapeutic compounds.
  • the pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration.
  • Human peroxisome assembly factor-10 is administered in an amount effective to treat and / or prevent a specific indication.
  • the amount and range of human peroxisome assembly factor-10 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

Abstract

The invention discloses a new kind of human peroxidosome assembly factor 10 and the polynucleotide encoding said polypeptide and a process for producing the polypeptide by recombinant methods. It also discloses the method of applying the polypeptide for the treatment of various kinds of diseases, such as Zellweger syndrome, infant suprarenal leukodystrophy, infant neurogenic or genetic incoordination, pipecolic acid supervacuus acid disease, other embryonic development diseases, metabolism disorders, different kinds of tumor, inflammation, immune diseases, HIV infection. The antagonist of the polypeptide and therapeutic use of the same is also disclosed. In addition, it refers to the use of polynucleotide encoding said human peroxidosome assembly factor 10.

Description

一种新的多肽一一人过氧化物酶体装配因子 -10和编码这种多肽的多核苷酸 技术领域  A new polypeptide-human peroxisome assembly factor-10 and a polynucleotide encoding the polypeptide TECHNICAL FIELD
本发明属于生物技术领域, 具体地说, 本发明描述了一种新的多肽一一人 过氧化物酶体装配因子- 10 , 以及编码此多肽的多核苷酸序列。 本发明还涉及 此多核苷酸和多肽的制备方法和应用。 背景技术  The present invention belongs to the field of biotechnology. Specifically, the present invention describes a new polypeptide, a human peroxisome assembly factor-10, and a polynucleotide sequence encoding the polypeptide. The invention also relates to methods and applications for preparing such polynucleotides and polypeptides. Background technique
过氧化物酶体又称微体, 是由单层膜包围的内含一种或几种氧化酶类的细 胞器。 过氧化物酶体是一种异质性的细胞器, 不同生物的细胞中, 甚至单细胞 生物的不同个体中所含酶的种类及其行使的功能都有所不同。 动物细胞中过氧 化物酶体在肝细胞或肾细胞中, 它可氧化分解血液中的有毒成分, 起到解毒作 用, 例如饮进的酒精几乎半数是在过氧化物酶体中氧化成乙醛的。 过氧化物酶 体中常含有两种酶: 一种是依赖于黄素 (FAD ) 的氧化酶, 起作用是将底物氧 化形成 H202; 二是过氧化氢酶, 其含量常占过氧化物酶体总蛋白量的 40%, 它 的作用是将 H202分解, 形成水和氧气。 由这两种酶催化的反应, 紧密耦联, 从 而使细胞免受 H202的毒害。 过氧化物酶体可降解生物大分子, 最终产生 H202 , 而其中的多数反应在其他细胞器中也可进行, 并不产生 H202 , 因此它的另一种 功能是分解脂肪酸等高能分子向细胞直接提供热能, 而不必通过水解 ATP 的途 径获得热能。 Peroxisomes, also called microsomes, are organelles containing one or more oxidases surrounded by a single membrane. Peroxisome is a heterogeneous organelle. The types of enzymes and the functions they perform are different in the cells of different organisms and even in different individuals of single-celled organisms. Peroxisomes in animal cells are in liver cells or kidney cells. It can oxidize and break down toxic components in the blood and play a detoxifying role. For example, almost half of the alcohol consumed is oxidized to acetaldehyde in the peroxisome. of. Peroxisomes often contain two enzymes: one is an oxidase that depends on flavin (FAD), and its role is to oxidize the substrate to form H 2 0 2 ; the other is catalase, whose content often accounts for over 40% of the total protein content of the oxidant body, its role is to break down H 2 0 2 to form water and oxygen. The reactions catalyzed by these two enzymes are tightly coupled to protect cells from H 2 0 2 poisoning. Peroxisomes can degrade biological macromolecules, eventually producing H 2 0 2 , and most of these reactions can also be performed in other organelles, and do not produce H 2 0 2 , so its other function is to decompose fatty acids, etc. High-energy molecules provide thermal energy directly to the cells, without having to obtain thermal energy by hydrolyzing ATP.
过氧化物酶体装配因子- 1 ( PAF- 1 )是一种过氧化物酶体的膜整合蛋白, 在 参与过氧化物酶体的装配过程中起着重要作用。 哺乳动物的过氧化物酶体装配 因子 -1 ( PAF-1 ) 高度同源, 都含有两段极其保守的序列, 即两个跨膜片段, 在 C00H-端区域还具有七个保守的半胱氨酸残基。 PAF- 1 的两个跨膜域对 PAF - 1 作为过氧化物酶体中的一种膜整合蛋白起到定位的作用(Nobuyuki Sh imozawa e t a l. , Science 255, 1132 (1992) ) 。  Peroxisome assembly factor-1 (PAF-1) is a membrane integrin of peroxisome, and plays an important role in the assembly of peroxisome. The mammalian peroxisome assembly factor-1 (PAF-1) is highly homologous and both contain two extremely conserved sequences, namely two transmembrane fragments, with seven conserved cystes in the C00H-terminal region. Amino acid residues. The two transmembrane domains of PAF-1 play a role in localizing PAF-1 as a membrane integrin in the peroxisome (Nobuyuki Sh imozawa e t al., Science 255, 1132 (1992)).
过氧化物酶体装配因子- 1 ( PAF-1 ) 缺失或者发生变异会影响过氧化物酶体 装配, 而一旦缺少这种正常的含过氧化氢酶的颗粒, 便会导致多种代谢紊乱, 例如过氧化物酶的 P -氧化及缩醛磷脂生物合成缺陷, 从而引发各种疾病, 例 如 Zel lweger 综合征, 新生儿肾上腺脑白质营养不良, 婴幼儿多神经炎性遗传 性运动失调以及六氢吡啶羧酸过多酸血症这些基因需要过氧化物酶体装配的遗 传疾病。 其中 Zel lweger 综合征是因 PAF-1 缺陷而引起的典型病症, 这种病是 致死的常染色体隐性疾病, 临床症状为严重的神经异常, 各种畸形特征, 肝大 以及多发性肾囊肿 ( E. A. C. Wiemer et a l. , Eur. J. Ce l l Biol. 50, 407 (1989) ) 。 The absence or mutation of the peroxisome assembly factor-1 (PAF-1) will affect the peroxisome assembly, and the absence of such normal catalase-containing particles will lead to a variety of metabolic disorders, For example, P-oxidation of peroxidase and defects in plasmalogen biosynthesis, which cause various diseases, such as Zel lweger syndrome, neonatal adrenal white matter dystrophy, polyneuritis hereditary dyskinesia in infants and young children, and hexahydrogen These genes are genetic disorders that require peroxisome assembly. Among them, Zel lweger syndrome is a typical condition caused by PAF-1 deficiency. This disease is A lethal autosomal recessive disease with clinical symptoms of severe neurological abnormalities, various abnormalities, hepatomegaly, and multiple renal cysts (EAC Wiemer et al., Eur. J. Ce ll Biol. 50, 407 (1989) ).
通过基因芯片的分析发现, 在胸腺、 睾丸、 肌肉、 脾脏、 肺、 皮肤、 甲状 腺、 肝、 PMA+的 Ecv304细胞株、 PMA -的 Ecv304细胞株、 未饥饿的 L02细胞株、 砷刺激 1 小时的 L02细胞株以及前列腺组织中, 本发明的多肽的表达谱与人过 氧化物酶体装配因子 -1 的表达谱非常近似, 因此二者功能也可能类似。 本发明 被命名为人过氧化物酶体装配因子 -10。  Gene chip analysis revealed that in the thymus, testis, muscle, spleen, lung, skin, thyroid, liver, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, arsenic-stimulated L02 In cell lines and prostate tissues, the expression profile of the polypeptide of the present invention is very similar to the expression profile of human peroxisome assembly factor-1, so their functions may also be similar. The invention is named human peroxisome assembly factor-10.
由于如上所述人过氧化物酶体装配因子- 10 蛋白在调节细胞分裂和胚胎发育 等机体重要功能中起重要作用, 而且相信这些调节过程中涉及大量的蛋白, 因 而本领域中一直需要鉴定更多参与这些过程的人过氧化物酶体装配因子 -10 蛋 白, 特别是鉴定这种蛋白的氨基酸序列。 新人过氧化物酶体装配因子- 10 蛋白 编码基因的分离也为研究确定该蛋白在健康和疾病状态下的作用提供了基础。 这种蛋白可能构成开发疾 1 病诊断和 /或治疗药的基础, 因此分离其编码 DM 是非常重要的。 发明的公开  As mentioned above, the human peroxisome assembly factor-10 protein plays an important role in regulating important functions of the body such as cell division and embryonic development, and it is believed that a large number of proteins are involved in these regulatory processes, so the identification of Many human peroxisome assembly factor-10 proteins are involved in these processes, especially the amino acid sequence of this protein is identified. The isolation of the new human peroxisome assembly factor-10 protein encoding gene also provides a basis for research to determine the role of this protein in health and disease states. This protein may form the basis for the development of diagnostic and / or therapeutic agents for diseases, so it is important to isolate its coding for DM. Disclosure of invention
本发明的一个目的是提供分离的新的多肽一一人过氧化物酶体装配因子- 10 以及其片段、 类似物和衍生物。  It is an object of the present invention to provide an isolated novel polypeptide, human peroxisome assembly factor-10, and fragments, analogs and derivatives thereof.
本发明的另一个目的是提供编码该多肽的多核苷酸。  Another object of the invention is to provide a polynucleotide encoding the polypeptide.
本发明的另一个目的是提供含有编码人过氧化物酶体装配因子 -10 的多核苷 酸的重组载体。  Another object of the present invention is to provide a recombinant vector containing a polynucleotide encoding human peroxisome assembly factor-10.
本发明的另一个目的是提供含有编码人过氧化物酶体装配因子 -10 的多核苷 酸的基因工程化宿主细胞。  It is another object of the present invention to provide a genetically engineered host cell containing a polynucleotide encoding human peroxisome assembly factor-10.
本发明的另一个目的是提供生产人过氧化物酶体装配因子 -10的方法。  Another object of the present invention is to provide a method for producing human peroxisome assembly factor-10.
本发明的另一个目的是提供针对本发明的多肽一一人过氧化物酶体装配因 子- 10的抗体。  Another object of the present invention is to provide an antibody against the human peroxisome assembly factor-10 of the polypeptide of the present invention.
本发明的另一个目的是提供了针对本发明多肽一一人过氧化物酶体装配因 子 -10的模拟化合物、 拮抗剂、 激动剂、 抑制剂。  Another object of the present invention is to provide mimetic compounds, antagonists, agonists, and inhibitors of the peroxisome assembly factor-10 of the polypeptide of the present invention.
本发明的另一个目的是提供诊断治疗与人过氧化物酶体装配因子 -10 异常相 关的疾病的方法。  Another object of the present invention is to provide a method for diagnosing and treating diseases related to abnormalities of human peroxisome assembly factor-10.
本发明涉及一种分离的多肽, 该多肽是人源的, 它包含: 具有 SEQ ID No. 2 氨基酸序列的 肽、 或其保守性变体、 生物活性片段或衍生物。 较佳地, 该多 肽是具有 SEQ ID NO: 2氨基酸序列的多肽。 The present invention relates to an isolated polypeptide. The polypeptide is of human origin and comprises: SEQ ID No. 2 Amino acid sequence of peptides, or conservative variants, biologically active fragments or derivatives thereof. Preferably, the polypeptide is a polypeptide having the amino acid sequence of SEQ ID NO: 2.
本发明还涉及一种分离的多核苷酸, 它包含选自下组的一种核苷酸序列或 其变体:  The invention also relates to an isolated polynucleotide comprising a nucleotide sequence or a variant thereof selected from the group consisting of:
(a)编码具有 SEQ ID No. · 2氨基酸序列的多肽的多核苷酸;  (a) a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID No. 2;
(b)与多核苷酸(a)互补的多核苷酸;  (b) a polynucleotide complementary to polynucleotide (a);
(c)与(a)或(b)的多核苷酸序列具有至少 70%相同性的多核苷酸。  (c) A polynucleotide having at least 70% identity to a polynucleotide sequence of (a) or (b).
更佳地, 该多核苷酸的序列是选自下组的一种: (a)具有 SEQ ID NO: 1 中 119-397位的序列; 和(b)具有 SEQ ID NO: 1中 1-2567位的序列。  More preferably, the sequence of the polynucleotide is one selected from the group consisting of: (a) a sequence having positions 119-397 in SEQ ID NO: 1; and (b) a sequence having 1-2567 in SEQ ID NO: 1 Sequence of bits.
本发明另外涉及一种含有本发明多核苷酸的载体, 特别是表达载体; 一种 用该载体遗传工程化的宿主细胞, 包括转化、 转导或转染的宿主细胞; 一种包 括培养所述宿主细胞和回收表达产物的制备本发明多肽的方法。  The present invention further relates to a vector, particularly an expression vector, containing the polynucleotide of the present invention; a host cell genetically engineered with the vector, including a transformed, transduced or transfected host cell; Host cell and method of preparing the polypeptide of the present invention by recovering the expression product.
本发明还涉及一种能与本发明多肽特异性结合的抗体。  The invention also relates to an antibody capable of specifically binding to a polypeptide of the invention.
本发明还涉及一种筛选的模拟、 激活、 拮抗或抑制人过氧化物酶体装配因 子 -10蛋白活性的化合物的方法, 其包括利用本发明的多肽。 本发明还涉及用 该方法获得的化合物。  The invention also relates to a method for screening compounds that mimic, activate, antagonize or inhibit the activity of the human peroxisome assembly factor-10 protein, which comprises utilizing the polypeptide of the invention. The invention also relates to compounds obtained by this method.
本发明还涉及一种体外检测与人过氧化物酶体装配因子 -10蛋白异常表达相 关的疾病或疾病易感性的方法, 包括检测生物样品中所述多肽或其编码多核苷酸 序列中的突变, 或者检测生物样品中本发明多肽的量或生物活性。  The invention also relates to a method for in vitro detection of a disease or susceptibility to disease associated with abnormal expression of the human peroxisome assembly factor-10 protein, which comprises detecting a mutation in the polypeptide or a polynucleotide sequence encoding the same in a biological sample. Or detecting the amount or biological activity of a polypeptide of the invention in a biological sample.
本发明也涉及一种药物组合物, 它含有本发明多肽或其模拟物、 激活剂、 拮 抗剂或抑制剂以及药学上可接受的载体。  The invention also relates to a pharmaceutical composition comprising a polypeptide of the invention or a mimetic thereof, an activator, an antagonist or an inhibitor, and a pharmaceutically acceptable carrier.
本发明还涉及本发明的多肽和 /或多核苷酸在制备用于治疗 Ze l lweger 综 合征、 新生儿肾上腺脑白质营养不 、 婴幼儿多神经炎性遗传性运动失调、 六 氢吡啶羧酸过多酸血症、 其它胚胎发育紊乱症、 生长发育障碍性疾病、 物质代 谢紊乱症、 各种肿瘤、 炎症、 免疫性疾病, HIV 感染或其它由于人过氧化物酶 体装配因子 -10表达异常所引起疾病的药物的用途。  The present invention also relates to the preparation of the polypeptide and / or polynucleotide of the present invention for the treatment of Ze l lweger syndrome, neonatal adrenal white matter dystrophy, polyneuritis hereditary ataxia in infants and young children, Polyacidemia, other embryonic developmental disorders, growth disorders, substance metabolism disorders, various tumors, inflammation, immune diseases, HIV infection, or other abnormalities due to abnormal expression of human peroxisome assembly factor-10 Use of drugs that cause disease.
本发明的其它方面由于本文的技术的公开, 对本领域的技术人员而言是显而 易见的。  Other aspects of the invention will be apparent to those skilled in the art from the disclosure of the techniques herein.
本说明书和权利要求书中使用的下列术语除非特别说明具有如下的含义: "核酸序列" 是指寡核苷酸、 核苷酸或多核苷酸及其片段或部分, 也可以 指基因组或合成的 DNA或 RNA, 它们可以是单链或双链的, 代表有义链或反义链。 类似地, 术语 "氨基酸序列" 是指寡肽、 肽、 多肽或蛋白质序列及其片段或部 分。 当本发明中的 "氨基酸序列" 涉及一种天然存在的蛋白质分子的氨基酸序 列时, 这种 "多肽" 或 "蛋白质" 不意味着将氨基酸序列限制为与所述蛋白质 分子相关的完整的天然氨基酸。 The following terms used in this specification and claims have the following meanings unless specifically stated: "Nucleic acid sequence" refers to an oligonucleotide, a nucleotide or a polynucleotide and a fragment or part thereof, and may also refer to a genomic or synthetic DNA or RNA, they can be single-stranded or double-stranded, representing the sense or antisense strand. Similarly, the term "amino acid sequence" refers to an oligopeptide, peptide, polypeptide or protein sequence and fragments or portions thereof Minute. When the "amino acid sequence" in the present invention relates to the amino acid sequence of a naturally occurring protein molecule, such "polypeptide" or "protein" does not mean to limit the amino acid sequence to a complete natural amino acid related to the protein molecule .
蛋白质或多核苷酸 "变体" 是指一种具有一个或多个氨基酸或核苷酸改变 的氨基酸序列或编码它的多核苷酸序列。 所述改变可包括氨基酸序列或核苷酸 序列中氨基酸或核苷酸的缺失、 插入或替换。 变体可具有 "保守性" 改变, 其 中替换的氨基酸具有与原氨基酸相类似的结构或化学性质, 如用亮氨酸替换异 亮氨酸。 变体也可具有非保守性改变, 如用色氨酸替换甘氨酸。  A "variant" of a protein or polynucleotide refers to an amino acid sequence having one or more amino acids or nucleotide changes or a polynucleotide sequence encoding it. The changes may include deletions, insertions or substitutions of amino acids or nucleotides in the amino acid sequence or nucleotide sequence. Variants can have "conservative" changes, in which the amino acid substituted has a structural or chemical property similar to the original amino acid, such as replacing isoleucine with leucine. Variants can also have non-conservative changes, such as replacing glycine with tryptophan.
"缺失" 是指在氨基酸序列或核苷酸序列中一个或多个氨基酸或核苷酸的 缺失。  "Deletion" refers to the deletion of one or more amino acids or nucleotides in an amino acid sequence or nucleotide sequence.
"插入" 或 "添加" 是指在氨基酸序列或核苷酸序列中的改变导致与天然存在 的分子相比, 一个或多个氨基酸或核苷酸的增加。 "替换" 是指由不同的氨基酸或 核苷酸替换一个或多个氨基酸或核苷酸。  "Insertion" or "addition" refers to an alteration in the amino acid sequence or nucleotide sequence that results in an increase in one or more amino acids or nucleotides compared to a naturally occurring molecule. "Replacement" refers to the replacement of one or more amino acids or nucleotides with different amino acids or nucleotides.
"生物活性" 是指具有天然分子的结构、 调控或生物化学功能的蛋白质。 类似 地, 术语 "免疫学活性" 是指天然的、 重组的或合成蛋白质及其片段在合适的动 物或细胞中诱导特定免疫反应以及与特异性抗体结合的能力。  "Biological activity" refers to a protein that has the structure, regulation, or biochemical function of a natural molecule. Similarly, the term "immunologically active" refers to the ability of natural, recombinant or synthetic proteins and fragments thereof to induce a specific immune response in appropriate animals or cells and to bind to specific antibodies.
"激动剂" 是指当与人过氧化物酶体装配因子 -1 0结合时, 一种可引起该蛋 白质改变从而调节该蛋白质活性的分子。 激动剂可以包括蛋白质、 核酸、 碳水 化合物或任何其它可结合人过氧化物酶体装配因子- 1 0的分子。  An "agonist" refers to a molecule that, when combined with human peroxisome assembly factor-10, causes a change in the protein to regulate the activity of the protein. An agonist may include a protein, a nucleic acid, a carbohydrate, or any other molecule that can bind to the human peroxisome assembly factor-10.
"拮抗剂" 或 "抑制物" 是指当与人过氧化物酶体装配因子 -1 0结合时, 一 种可封闭或调节人过氧化物酶体装配因子 -1 0的生物学活性或免疫学活性的分 子。 拮抗剂和抑制物可以包括蛋白质、 核酸、 碳水化合物或任何其它可结合人 过氧化物酶体装配因子- 1 0的分子。  "Antagonist" or "inhibitor" refers to a biological activity or immunity that can block or regulate human peroxisome assembly factor-10 when combined with human peroxisome assembly factor-10. Chemically active molecules. Antagonists and inhibitors may include proteins, nucleic acids, carbohydrates, or any other molecule that can bind to the human peroxisome assembly factor-10.
"调节" 是指人过氧化物酶体装配因子- 1 0的功能发生改变, 包括蛋白质活 性的升高或降低、 结合特性的改变及人过氧化物酶体装配因子 -1 0的任何其它 生物学性质、 功能或免疫性质的改变。  "Regulation" refers to a change in the function of human peroxisome assembly factor-10, including an increase or decrease in protein activity, a change in binding characteristics, and any other organism of human peroxisome assembly factor-10 Changes in nature, function, or immunity.
"基本上纯1'是指基本上不含天然与其相关的其它蛋白、脂类、糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化人过氧化物酶体装配因子- 10。 基本上纯的人过氧化物酶体装配因子- 10 在非还原性聚丙烯酰胺凝胶上能产生单一 的主带。 人过氧化物酶体装配因子 -10多肽的纯度可用氨基酸序列分析。 "Substantially pure 1 'means substantially free of other proteins, lipids, sugars or other substances with which it is naturally associated. Those skilled in the art can purify human peroxisome assembly factors using standard protein purification techniques- 10. Basically pure human peroxisome assembly factor-10 produces a single main band on a non-reducing polyacrylamide gel. The purity of human peroxisome assembly factor-10 polypeptide can be analyzed by amino acid sequence .
"互补的" 或 "互补" 是指在允许的盐浓度和温度条件下通过碱基配对的 多核苷酸天然结合。 例如, 序列 "C- T-G- A" 可与互补的序列 "G-A- C-T" 结合。 两个单链分子之间的互补可以是部分的或全部的。 核酸链之间的互补程度对于 核酸链之间杂交的效率及强度有明显影响。 "Complementary" or "complementary" refers to polynucleotides that naturally bind through base-pairing under conditions of acceptable salt concentration and temperature. For example, the sequence "C-TG-A" can be combined with the complementary sequence "GA-CT". The complementarity between two single-stranded molecules may be partial or complete. The degree of complementarity between nucleic acid strands has a significant effect on the efficiency and strength of hybridization between nucleic acid strands.
"同源性" 是指互补的程度, 可以是部分同源或完全同源。 "部分同源" 是指一种部分互补的序列, 其至少可部分抑制完全互补的序列与靶核酸的杂 交。 这种杂交的抑制可通过在严格性程度降低的条件下进行杂交 (Southern印 迹或 Nor thern印迹等) 来检测。 基本上同源的序列或杂交探针可竟争和抑制完 全同源的序列与靶序列在的严格性程度降低的条件下的结合。 这并不意味严格 性程度降低的条件允许非特异性结合, 因为严格性程度降低的条件要求两条序 列相互的结合为特异性或选择性相互作用。  "Homology" refers to the degree of complementarity and can be partially homologous or completely homologous. "Partial homology" refers to a partially complementary sequence that at least partially inhibits hybridization of a fully complementary sequence to a target nucleic acid. This inhibition of hybridization can be detected by performing hybridization (Southern imprinting or Nor thern blotting, etc.) under conditions of reduced stringency. Substantially homologous sequences or hybridization probes can compete and inhibit the binding of fully homologous sequences to the target sequence under conditions of reduced stringency. This does not mean that conditions with reduced stringency allow non-specific binding, because conditions with reduced stringency require that the two sequences bind to each other as either specific or selective interactions.
"相同性百分率" 是指在两种或多种氨基酸或核酸序列比较中序列相同或 相似的百分率。 可用电子方法测定相同性百分率, 如通过 MEGALIGN程序 ( Lasergene sof tware package, DNASTAR, Inc. , Madi son Wi s. ) 。 MEGALIGN 程序可根据不同的方法如 Clus ter法比较两种或多种序列(Higg ins, D. G. 和 P. M. Sharp (1988) Gene 73: 237-244) 0 C lus ter法通过检查所有配对之间的距 离将各组序列排列成簇。 然后将各簇以成对或成组分配。 两个氨基酸序列如序 列 A和序列 B之间的相同性百分率通过下式计算: 序列 A与序列 B之间匹配的残基个数 X 100 序列 A的残基数一序列 A中间隔残基数一序列 B中间隔残基数 也可以通过 Clus ter法或用本领域周知的方法如 Jotun Hein 测定核酸序列 之间的相同性百分率(Hein J. , (1990) Methods in emzumology 183: 625-645)„ "相似性 " 是指氨基酸序列之间排列对比时相应位置氨基酸残基的相同或 保守性取代的程度。 用于保守性取代的氨基酸例如, 带负电荷的氨基酸可包括 天冬氨酸和谷氨酸; 带正电荷的氨基酸可包括赖氨酸和精氨酸; 具有不带电荷 的头部基团有相似亲水性的氨基酸可包括亮氨酸、 异亮氨酸和缬氨酸; 甘氨酸 和丙氨酸; 天冬酰胺和谷氨酰胺; 丝氨酸和苏氨酸; 苯丙氨酸和酪氨酸。 "Percent identity" refers to the percentage of sequences that are identical or similar in the comparison of two or more amino acid or nucleic acid sequences. The percent identity can be determined electronically, such as by the MEGALIGN program (Lasergene sof tware package, DNASTAR, Inc., Madi son Wis.). The MEGALIGN program can compare two or more sequences according to different methods such as the Clus ter method (Higg ins, DG and PM Sharp (1988) Gene 73: 237-244). 0 The C lus ter method will check the distance between all pairs by Groups of sequences are arranged in clusters. The clusters are then assigned in pairs or groups. The percent identity between two amino acid sequences such as sequence A and sequence B is calculated by the following formula: The number of matching residues between sequence A and sequence X 100 The number of residues in sequence A-the number of spacer residues in sequence A The number of spacer residues in a sequence B can also be determined by Clus ter method or using methods known in the art such as Jotun Hein. The percent identity between nucleic acid sequences (Hein J., (1990) Methods in emzumology 183: 625-645) „" Similarity "refers to the degree of identical or conservative substitutions of amino acid residues at corresponding positions in the alignment between amino acid sequences. Amino acids used for conservative substitutions, for example, negatively charged amino acids may include aspartic acid and glutamic acid. Amino acids; positively charged amino acids may include lysine and arginine; amino acids with similarly charged head groups that have similar hydrophilicity may include leucine, isoleucine, and valine; glycine And alanine; asparagine and glutamine; serine and threonine; phenylalanine and tyrosine.
"反义" 是指与特定的 DM或 RNA序列互补的核苷酸序列。 "反义链" 是指 与 "有义链" 互补的核酸链。  "Antisense" refers to a nucleotide sequence that is complementary to a particular DM or RNA sequence. "Antisense strand" refers to a nucleic acid strand that is complementary to a "sense strand."
"衍生物" 是指 HFP或编码其的核酸的化学修饰物。 这种化学修饰物可以是 用烷基、 酰基或氨基替换氢原子。 核酸衍生物可编码保留天然分子的主要生物 学特性的多肽。 "Derivative" refers to a chemical modification of HFP or a nucleic acid encoding it. This chemical modification may be the replacement of a hydrogen atom with an alkyl, acyl or amino group. Nucleic acid derivatives encode major organisms that retain natural molecules Peptides with chemical properties.
"抗体" 是指完整的抗体分子及其片段, 如 Fa、 ?(^') 2及? , 其能特异 性结合人过氧化物酶体装配因子 -10的抗原决定簇。 "Antibody" refers to a complete antibody molecule and its fragments, such as Fa,? (^ ') 2 and? , It can specifically bind to the epitope of human peroxisome assembly factor-10.
"人源化抗体" 是指非抗原结合区域的氨基酸序列被替换变得与人抗体更 为相似, 但仍保留原始结合活性的抗体。  A "humanized antibody" refers to an antibody in which the amino acid sequence of a non-antigen binding region is replaced to become more similar to a human antibody, but still retains the original binding activity.
"分离的" 一词指将物质从它原来的环境 (例如, 若是自然产生的就指其 天然环境) 之中移出。 比如说, 一个自然产生的多核苷酸或多肽存在于活动物 中就是没有被分离出来, 但同样的多核苷酸或多肽同一些或全部在自然系统中 与之共存的物质分开就是分离的。 这样的多核苷酸可能是某一载体的一部分, 也可能这样的多核苷酸或多肽是某一组合物的一部分。 既然载体或组合物不是 它天然环境的成分, 它们仍然是分离的。  The term "isolated" refers to the removal of a substance from its original environment (for example, its natural environment if it is naturally occurring). For example, a naturally-occurring polynucleotide or polypeptide is not isolated when it is present in a living thing, but the same polynucleotide or polypeptide is separated from some or all of the substances that coexist with it in the natural system. Such a polynucleotide may be part of a certain vector, or such a polynucleotide or polypeptide may be part of a certain composition. Since the carrier or composition is not part of its natural environment, they are still isolated.
如本发明所用, "分离的" 是指物质从其原始环境中分离出来 (如果是天 然的物质, 原始环境即是天然环境) 。 如活体细胞内的天然状态下的多聚核苷 酸和多肽是没有分离纯化的, 但同样的多聚核苷酸或多肽如从天然状态中同存 在的其他物质中分开, 则为分离纯化的。  As used herein, "isolated" refers to the separation of a substance from its original environment (if it is a natural substance, the original environment is the natural environment). For example, polynucleotides and polypeptides in a natural state in a living cell are not isolated and purified, but the same polynucleotides or polypeptides are separated and purified if they are separated from other substances in the natural state .
如本文所用, "分离的人过氧化物酶体装配因子 -10" 是指人过氧化物酶体 装配因子 -10 基本上不含天然与其相关的其它蛋白、 脂类、 糖类或其它物质。 本领域的技术人员能用标准的蛋白质纯化技术纯化人过氧化物酶体装配因子- As used herein, "isolated human peroxisome assembly factor-10" refers to human peroxisome assembly factor-10, which is substantially free of other proteins, lipids, carbohydrates, or other substances naturally associated with it. Those skilled in the art can purify human peroxisome assembly factors using standard protein purification techniques-
10。 基本上纯的多肽在非还原聚丙烯酰胺凝胶上能产生单一的主带。 人过氧化 物酶体装配因子- 10多肽的纯度能用氨基酸序列分析。 10. Substantially pure polypeptides can produce a single main band on a non-reducing polyacrylamide gel. The purity of the human peroxisome assembly factor-10 polypeptide can be analyzed by amino acid sequence.
本发明提供了一种新的多肽一一人过氧化物酶体装配因子 -10 , 其基本上是 由 SEQ ID NO: 2所示的氨基酸序列组成的。 本发明的多肽可以是重组多肽、 天然多 肽、 合成多肽, 优选重组多肽。 本发明的多肽可以是天然纯化的产物, 或是化学 合成的产物, 或使用重组技术从原核或真核宿主 (例如, 细菌、 酵母、 高等植物、 昆虫和哺乳动物细胞)中产生。 根据重组生产方案所用的宿主, 本发明的多肽可以 是糖基化的, 或可以是非糖基化的。 本发明的多肽还可包括或不包括起始的甲硫 氨酸残基。  The present invention provides a new polypeptide, human peroxisome assembly factor-10, which is basically composed of the amino acid sequence shown in SEQ ID NO: 2. The polypeptide of the present invention may be a recombinant polypeptide, a natural polypeptide, or a synthetic polypeptide, and preferably a recombinant polypeptide. The polypeptides of the present invention can be naturally purified products, or chemically synthesized products, or can be produced from prokaryotic or eukaryotic hosts (eg, bacteria, yeast, higher plants, insects, and mammalian cells) using recombinant techniques. Depending on the host used in the recombinant production protocol, the polypeptide of the invention may be glycosylated, or it may be non-glycosylated. Polypeptides of the invention may also include or exclude starting methionine residues.
本发明还包括人过氧化物酶体装配因子- 10 的片段、 衍生物和类似物。 如 本发明所用, 术语 "片段" 、 "衍生物" 和 "类似物" 是指基本上保持本发明 的人过氧化物酶体装配因子 -10 相同的生物学功能或活性的多肽。 本发明多肽 的片段、 衍生物或类似物可以是: ( I ) 这样一种, 其中一个或多个氨基酸残 基被保守或非保守氨基酸残基 (优选的是保守氨基酸残基) 取代, 并且取代的 氨基酸可以是也可以不是由遗传密码子编码的; 或者 ( I I ) 这样一种, 其中一 个或多个氨基酸残基上的某个基团被其它基团取代包含取代基; 或者 ( I I I ) 这样一种, 其中成熟多肽与另一种化合物 (比如延长多肽半衰期的化合物, 例 如聚乙二醇) 融合; 或者 ( IV ) 这样一种, 其中附加的氨基酸序列融合进成熟 多肽而形成的多肽序列 (如前导序列或分泌序列或用来纯化此多肽的序列或蛋 白原序列) 通过本文的阐述, 这样的片段、 衍生物和类似物被认为在本领域技 术人员的知识范围之内。 The invention also includes fragments, derivatives and analogs of human peroxisome assembly factor-10. As used in the present invention, the terms "fragment", "derivative" and "analog" refer to a polypeptide that substantially maintains the same biological function or activity of the human peroxisome assembly factor-10 of the present invention. A fragment, derivative or analog of the polypeptide of the present invention may be: (I) a kind in which one or more amino acid residues are substituted with conservative or non-conservative amino acid residues (preferably conservative amino acid residues), and the substitution of The amino acid may or may not be encoded by the genetic code; or (II) such a type in which a group on one or more amino acid residues is substituted by another group to include a substituent; or (III) such a Species, wherein the mature polypeptide is fused with another compound (such as a compound that extends the half-life of the polypeptide, such as polyethylene glycol); or (IV) a polypeptide sequence in which an additional amino acid sequence is fused into a mature polypeptide (such as Leader sequences or secreted sequences or sequences used to purify this polypeptide or protease sequences) As set forth herein, such fragments, derivatives and analogs are considered to be within the knowledge of those skilled in the art.
本发明提供了分离的核酸 (多核苷酸) , 基本由编码具有 SEQ ID NO: 2 氨 基酸序列的多肽的多核苷酸组成。 本发明的多核苷酸序列包括 SEQ ID N0: 1 的 核苷酸序列。 本发明的多核苷酸是从人胎脑组织的 cDNA 文库中发现的。 它包 含的多核苷酸序列全长为 2567个碱基, 其开放读框 119-397编码了 92个氨基 酸。 根据基因芯片表达谱比较发现, 此多肽与人过氧化物酶体装配因子 -1 有相 似的表达谱, 可推断出该人过氧化物酶体装配因子- 10 具有人过氧化物酶体装 配因子 -1相似的功能。  The present invention provides an isolated nucleic acid (polynucleotide), which basically consists of a polynucleotide encoding a polypeptide having the amino acid sequence of SEQ ID NO: 2. The polynucleotide sequence of the present invention includes the nucleotide sequence of SEQ ID NO: 1. The polynucleotide of the present invention is found from a cDNA library of human fetal brain tissue. It contains a polynucleotide sequence of 2567 bases in length and its open reading frame 119-397 encodes 92 amino acids. According to the comparison of gene chip expression profiles, it was found that this peptide has a similar expression profile to human peroxisome assembly factor-1, and it can be inferred that the human peroxisome assembly factor-10 has human peroxisome assembly factor -1 similar functionality.
本发明的多核苷酸可以是 DM形式或是 RNA形式。 DNA形式包括 cDM、 基 因组 DNA或人工合成的 DM。 DNA可以是单链的或是双链的。 DNA可以是编码链 或非编码链。 编码成熟多肽的编码区序列可以与 SEQ ID NO: 1 所示的编码区序 列相同或者是简并的变异体。 如本发明所用, "简并的变异体" 在本发明中是 指编码具有 SEQ ID NO: 2 的蛋白质或多肽, 但与 SEQ ID NO: 1 所示的编码区序 列有差别的核酸序列。  The polynucleotide of the present invention may be in the form of DM or RNA. DNA forms include cDM, genomic DNA, or synthetic DM. DNA can be single-stranded or double-stranded. DNA can be coding or non-coding. The coding region sequence encoding a mature polypeptide may be the same as the coding region sequence shown in SEQ ID NO: 1 or a degenerate variant. As used herein, a "degenerate variant" refers to a nucleic acid sequence encoding a protein or polypeptide having SEQ ID NO: 2 in the present invention, but which differs from the coding region sequence shown in SEQ ID NO: 1.
编码 SEQ ID NO: 2的成熟多肽的多核苷酸包括: 只有成熟多肽的编码序列; 成熟多肽的编码序列和各种附加编码序列; 成熟多肽的编码序列 (和任选的附 加编码序列) 以及非编码序列。  The polynucleotide encoding the mature polypeptide of SEQ ID NO: 2 includes: only the coding sequence of the mature polypeptide; the coding sequence of the mature polypeptide and various additional coding sequences; the coding sequence of the mature polypeptide (and optional additional coding sequences); Coding sequence.
术语 "编码多肽的多核苷酸" 是指包括编码此多肽的多核苷酸和包括附加 编码和 /或非编码序列的多核苷酸。  The term "polynucleotide encoding a polypeptide" refers to a polynucleotide comprising the polypeptide and a polynucleotide comprising additional coding and / or non-coding sequences.
本发明还涉及上述描述多核苷酸的变异体, 其编码与本发明有相同的氨基 酸序列的多肽或多肽的片断、 类似物和衍生物。 此多核苷酸的变异体可以是天 然发生的等位变异体或非天然发生的变异体。 这些核苷酸变异体包括取代变异 体、 缺失变异体和插入变异体。 如本领域所知的, 等位变异体是一个多核苷酸 的替换形式, 它可能是一个或多个核苷酸的取代、 缺失或插入, 但不会从实质 上改变其编码的多肽的功能。  The invention also relates to variants of the polynucleotides described above, which encode polypeptides or fragments, analogs and derivatives of polypeptides having the same amino acid sequence as the invention. Variants of this polynucleotide can be naturally occurring allelic variants or non-naturally occurring variants. These nucleotide variants include substitution variants, deletion variants, and insertion variants. As known in the art, an allelic variant is an alternative form of a polynucleotide that may be a substitution, deletion, or insertion of one or more nucleotides, but does not substantially change the function of the polypeptide it encodes .
本发明还涉及与以上所描述的序列杂交的多核苷酸 (两个序列之间具有至 少 50% , 优选具有 70%的相同性) 。 本发明特别涉及在严格条件下与本发明所 述多核苷酸可杂交的多核苷酸。 在本发明中, "严格条件" 是指: α)在较低 离子强度和较高温度下的杂交和洗脱, 如 0. 2xSSC, 0. 1%SDS, 60 °C ;或(2)杂交 时加用变性剂, 如 50% (v/v)甲酰胺, 0. 1%小牛血清 / 0. l%F i co l l , 42 °C等; 或(3) 仅在两条序列之间的相同性至少在 95%以上,更好是 97%以上时才发生杂交。 并 且, 可杂交的多核苷酸编码的多肽与 SEQ ID NO: 2 所示的成熟多肽有相同的 生物学功能和活性。 The present invention also relates to a polynucleotide that hybridizes to a sequence described above 50% less, preferably 70% identity). The invention particularly relates to polynucleotides that can hybridize to the polynucleotides of the invention under stringent conditions. In the present invention, "strict conditions" means: a) hybridization and elution at lower ionic strength and higher temperature, such as 0.2xSSC, 0.1% SDS, 60 ° C; or (2) hybridization When using denaturants, such as 50% (v / v) formamide, 0.1% calf serum / 0.1% F i co ll, 42 ° C, etc .; or (3) only between two sequences Hybridization occurs only when the identity is at least 95%, and more preferably 97%. In addition, the polypeptide encoded by the hybridizable polynucleotide has the same biological function and activity as the mature polypeptide shown in SEQ ID NO: 2.
本发明还涉及与以上所描述的序列杂交的核酸片段。 如本发明所用, "核 酸片段"的长度至少含 1 0个核苷酸, 较好是至少 20- 30个核苷酸, 更好是至少 50-60 个核苷酸, 最好是至少 100 个核苷酸以上。 核酸片段也可用于核酸的扩 增技术(如 PCR)以确定和 /或分离编码人过氧化物酶体装配因子 -1 0 的多核苷 '酸。  The invention also relates to nucleic acid fragments that hybridize to the sequences described above. As used herein, a "nucleic acid fragment" contains at least 10 nucleotides in length, preferably at least 20-30 nucleotides, more preferably at least 50-60 nucleotides, most preferably at least 100 nucleotides. Nucleotides or more. Nucleic acid fragments can also be used in nucleic acid amplification techniques (such as PCR) to identify and / or isolate polynucleotide acids encoding human peroxisome assembly factor-10.
本发明中的多肽和多核苷酸优选以分离的形式提供, 更佳地被纯化至均质。 本发明的编码人过氧化物酶体装配因子- 10 的特异的多核苷酸序列能用多 种方法获得。 例如, 用本领域熟知的杂交技术分离多核苷酸。 这些技术包括但 不局限于: 1)用探针与基因组或 cDNA文库杂交以检出同源的多核苷酸序列, 和 2)表达文库的抗体筛选以检出具有共同结构特征的克隆的多核苷酸片段。  The polypeptides and polynucleotides in the present invention are preferably provided in an isolated form and are more preferably purified to homogeneity. The specific polynucleotide sequence encoding the human peroxisome assembly factor-10 of the present invention can be obtained by various methods. For example, polynucleotides are isolated using hybridization techniques well known in the art. These techniques include, but are not limited to: 1) hybridization of probes to genomic or cDNA libraries to detect homologous polynucleotide sequences, and 2) antibody screening of expression libraries to detect cloned polynucleosides with common structural characteristics Acid fragments.
本发明的 DM片段序列也能用下列方法获得: 1)从基因组 DM分离双链 DNA 序列; ' 2)化学合成 DNA序列以获得所述多肽的双链 DNA。  The DM fragment sequence of the present invention can also be obtained by the following methods: 1) isolation of double-stranded DNA sequence from genomic DM; '2) chemical synthesis of DNA sequence to obtain double-stranded DNA of said polypeptide.
上述提到的方法中, 分离基因组 DNA 最不常用。 DNA 序列的直接化学合成 是经常选用的方法。 更经常选用的方法是 cDM序列的分离。 分离感兴趣的 cDNA 的标准方法是从高表达该基因的供体细胞分离 mRNA并进行逆转录, 形成质粒或 噬菌体 cDNA 文库。 提取 mRM 的方法已有多种成熟的技术, 试剂盒也可从商业 途径获得(Qi agene;)。 而构建 cDNA 文库也是通常的方法(Sambrook, et a l. , Mo lecular C loning, A Labora tory Manua l , Co ld Spr ing Harbor Labora tory. New York , 1989)。 还可得到商业供应的 cDNA 文库, 如 Clontech 公司的不同 cDNA 文库。 当结合使用聚合酶反应技术时, 即使极少的表达产物也能克隆。  Of the methods mentioned above, genomic DNA isolation is the least commonly used. Direct chemical synthesis of DNA sequences is often the method of choice. The more commonly used method is the separation of cDM sequences. The standard method for isolating the cDNA of interest is to isolate mRNA from donor cells that overexpress the gene and perform reverse transcription to form a plasmid or phage cDNA library. There are many mature techniques for extracting mRM, and kits are also commercially available (Qi agene;). And the construction of cDNA libraries is also a common method (Sambrook, et al., Molecular Cloning, A Labora tory Manua, Coll Spring Harbor Labora tory. New York, 1989). Commercially available cDNA libraries are also available, such as different cDNA libraries from Clontech. When polymerase reaction technology is used in combination, even very small expression products can be cloned.
可用常规方法从这些 cDM 文库中筛选本发明的基因。 这些方法包括(但不 限于): (l) DNA-DNA或 DNA-RNA杂交; (2)标志基因功能的出现或丧失; (3)测定 人过氧化物酶体装配因子- 10 的转录本的水平; (4)通过免疫学技术或测定生物 学活性, 来检测基因表达的蛋白产物。 上述方法可单用, 也可多种方法联合应 用。 在第(1)种方法中, 杂交所用的探针是与本发明的多核苷酸的任何一部分同 源, 其长度至少 10个核苷酸, 较好是至少 30个核苷酸, 更好是至少 50个核苷 酸, 最好是至少 100个核苷酸。 此外, 探针的长度通常在 2000个核苷酸之内, 较佳的为 1000个核苷酸之内。 此处所用的探针通常是在本发明的基因序列信息 的基础上化学合成的 DNA序列。 本发明的基因本身或者片段当然可以用作探针。 DNA探针的标记可用放射性同位素, 荧光素或酶(如碱性磷酸酶)等。 The genes of the present invention can be screened from these CDM libraries by conventional methods. These methods include (but are not limited to): (l) DNA-DNA or DNA-RNA hybridization; (2) the presence or absence of marker gene functions; (3) determination of the transcript of human peroxisome assembly factor-10 Level; (4) detecting protein products of gene expression by immunological techniques or measuring biological activity. The above methods can be used singly or in combination. In the method (1), the probe used for hybridization is homologous to any part of the polynucleotide of the present invention, and its length is at least 10 nucleotides, preferably at least 30 nucleotides, more preferably At least 50 nucleotides, preferably at least 100 nucleotides. In addition, the length of the probe is usually within 2000 nucleotides, preferably within 1000 nucleotides. The probe used herein is generally a DNA sequence chemically synthesized based on the gene sequence information of the present invention. The genes or fragments of the present invention can of course be used as probes. DNA probes can be labeled with radioisotopes, luciferin, or enzymes (such as alkaline phosphatase).
在第(4)种方法中, 检测人过氧化物酶体装配因子 -10 基因表达的蛋白产物 可用免疫学技术如 Western 印迹法, 放射免疫沉淀法, 酶联免疫吸附法(ELISA) 等。  In the method (4), the protein product of human peroxisome assembly factor-10 gene expression can be detected by immunological techniques such as Western blotting, radioimmunoprecipitation, and enzyme-linked immunosorbent assay (ELISA).
应 用 PCR 技 术 扩 增 DNA/RNA 的 方 法 (Saiki, et al. Science DNA / RNA Amplification Using PCR Techniques (Saiki, et al. Science
1985; 230: 1350-1354)被优选用于获得本发明的基因。 特别是很难从文库中得到 全长的 cDNA 时, 可优选使用 RACE法(RACE - cDM末端快速扩增法), 用于 PCR 的引物可根据本文所公开的本发明的多核苷酸序列信息适当地选择, 并可用常 规方法合成。 可用常规方法如通过凝胶电泳分离和纯化扩增的 DNA/RNA片段。 1985; 230: 1350-1354) are preferred for obtaining the genes of the invention. In particular, when it is difficult to obtain full-length cDNA from a library, the RACE method (RACE-cDM terminal rapid amplification method) can be preferably used, and the primers used for PCR can be appropriately based on the polynucleotide sequence information of the present invention disclosed herein. Select and synthesize using conventional methods. The amplified DNA / RNA fragments can be isolated and purified by conventional methods such as by gel electrophoresis.
如上所述得到的本发明的基因, 或者各种 DNA 片段等的多核苷酸序列可用 常规方法如双脱氧链终止法(Sanger et al. PNAS, 1977, 74: 5463- 5467)测定。 这类多核苷酸序列测定也可用商业测序试剂盒等。为了获得全长的 cDNA序列, 测 序需反复进行。 有时需要测定多个克隆的 cDNA 序列, 才能拼接成全长的 cDNA 序列。  The polynucleotide sequence of the gene of the present invention or various DNA fragments and the like obtained as described above can be determined by a conventional method such as dideoxy chain termination method (Sanger et al. PNAS, 1977, 74: 5463-5467). Such polynucleotide sequences can also be determined using commercial sequencing kits and the like. In order to obtain the full-length cDNA sequence, the sequencing must be repeated. Sometimes it is necessary to determine the cDNA sequence of multiple clones in order to splice into a full-length cDNA sequence.
本发明也涉及包含本发明的多核苷酸的载体, 以及用本发明的载体或直接 用人过氧化物酶体装配因子 -10 编码序列经基因工程产生的宿主细胞, 以及经 重组技术产生本发明所述多肽的方法。  The present invention also relates to a vector comprising the polynucleotide of the present invention, and a host cell produced by genetic engineering using the vector of the present invention or directly using a human peroxisome assembly factor-10 coding sequence, and recombinant technology to produce the Said method of polypeptide.
本发明中, 编码人过氧化物酶体装配因子 -10 的多核苷酸序列可插入到载 体中, 以构成含有本发明所述多核苷酸的重组载体。 术语 "载体" 指本领域熟 知的细菌质粒、 噬菌体、 酵母质粒、 植物细胞病毒、 哺乳动物细胞病毒如腺病 毒、 逆转录病毒或其它载体。 在本发明中适用的载体包括但不限于: 在细菌中 表达的基于 T7 启动子的表达载体(Rosenberg, et al. Gene, 1987, 56: 125) ; 在哺乳动物细胞中表达的 pMSXND 表达载体(Lee and Nathans, J Bio Chem. 263: 3521, 1988)和在昆虫细胞中表达的来源于杆状病毒的载体。 总之, 只要能 在宿主体内复制和稳定, 任何质粒和载体都可以用于构建重组表达载体。 表达 载体的一个重要特征是通常含有复制起始点、 启动子、 标记基因和翻译调控元 件。 本领域的技术人员熟知的方法能用于构建含编码人过氧化物酶体装配因子-In the present invention, a polynucleotide sequence encoding human peroxisome assembly factor-10 can be inserted into a vector to form a recombinant vector containing the polynucleotide of the present invention. The term "vector" refers to bacterial plasmids, phages, yeast plasmids, plant cell viruses, mammalian cell viruses such as adenoviruses, retroviruses, or other vectors well known in the art. Vectors suitable for use in the present invention include, but are not limited to: T7 promoter-based expression vectors expressed in bacteria (Rosenberg, et al. Gene, 1987, 56: 125); pMSXND expression vectors expressed in mammalian cells ( Lee and Nathans, J Bio Chem. 263: 3521, 1988) and baculovirus-derived vectors expressed in insect cells. In short, as long as it can be replicated and stabilized in a host, any plasmid and vector can be used to construct a recombinant expression vector. An important feature of expression vectors is that they usually contain an origin of replication, a promoter, a marker gene, and translational regulatory elements. Methods known to those skilled in the art can be used to construct an assembly factor containing human peroxisome-
10 的 DNA 序列和合适的转录 /翻译调控元件的表达载体。 这些方法包括体外重 组 DM 技术、 DNA 合成技术、 体内重组技术等(Sambroook, et a l. Mo l ecular Cloning, a Laboratory Manua l , col d Spr ing Harbor Labora tory. New York, 1989)。 所述的 DNA序列可有效连接到表达载体中的适当启动子上, 以指导 raRNA 合成。 这些启动子的代表性例子有: 大肠杆菌的 lac 或 t rp启动子; λ噬菌体 的 PL启动子; 真核启动子包 CMV立即早期启动子、 HSV胸苷激酶启动子、 早 期和晚期 SV40 启动子、 反转录病毒的 LTRs 和其它一些已知的可控制基因在原 核细胞或真核细胞或其病毒中表达的启动子。 表达载体还包括翻译起始用的核 糖体结合位点和转录终止子等。 在载体中插入增强子序列将会使其在高等真核 细胞中的转录得到增强。 增强子是 DNA表达的顺式作用因子, 通常大约有 10到 300 个碱基对, 作用于启动子以增强基因的转录。 可举的例子包括在复制起始 点晚期一侧的 1 00到 270个碱基对的 SV40增强子、 在复制起始点晚期一侧的多 瘤增强子以及腺病毒增强子等。 10 DNA sequences and expression vectors with appropriate transcriptional / translational regulatory elements. These methods include in vitro shuffling DM technology, DNA synthesis technology, in vivo recombination technology, etc. (Sambroook, et al. Molecular Cloning, a Laboratory Manua l, cold Harbor Labora tory. New York, 1989). The DNA sequence can be operably linked to an appropriate promoter in the expression vector to guide the synthesis of raRNA. Representative examples of these promoters are: E. coli lac or trp promoter; Lambda phage PL promoter; eukaryotic promoter package CMV immediate early promoter, HSV thymidine kinase promoter, early and late SV40 promoter , Retroviral LTRs and other known promoters that control the expression of genes in prokaryotic or eukaryotic cells or their viruses. The expression vector also includes a ribosome binding site for translation initiation and a transcription terminator. Insertion of enhancer sequences into the vector will enhance its transcription in higher eukaryotic cells. Enhancers are cis-acting factors for DNA expression, usually about 10 to 300 base pairs, which act on promoters to enhance gene transcription. Examples include 100 to 270 base pair SV40 enhancers on the late side of the origin of replication, polyoma enhancers and adenovirus enhancers on the late side of the origin of replication.
此外, 表达载体优选地包含一个或多个选择性标记基因, 以提供用于选择 转化的宿主细胞的表型性状, 如真核细胞培养用的二氢叶酸还原酶、 新霉素抗 性以及绿色荧光蛋白(GFP) , 或用于大肠杆菌的四环素或氨苄青霉素抗性等。  In addition, the expression vector preferably contains one or more selectable marker genes to provide phenotypic traits for selection of transformed host cells, such as dihydrofolate reductase, neomycin resistance, and green for eukaryotic cell culture. Fluorescent protein (GFP), or tetracycline or ampicillin resistance for E. coli.
本领域一般技术人员都清楚如何选择适当的载体 /转录调控元件 (如启动 子、 增强子等) 和选择性标记基因。  Those of ordinary skill in the art will know how to select appropriate vector / transcription control elements (such as promoters, enhancers, etc.) and selectable marker genes.
本发明中, 编码人过氧化物酶体装配因子- 10 的多核苷酸或含有该多核苷 酸的重组载体可转化或转导入宿主细胞, 以构成含有该多核苷酸或重组载体的 基因工程化宿主细胞。 术语 "宿主细胞" 指原核细胞, 如细菌细胞; 或是低等 真核细胞, 如酵母细胞; 或是高等真核细胞, 如哺乳动物细胞。 代表性例子有: 大肠杆菌, 链霉菌属; 细菌细胞如鼠伤寒沙门氏菌; 真菌细胞如酵母; 植物细 胞; 昆虫细胞如果蝇 S2或 Sf9 ; 动物细胞如 CH0、 COS或 Bowes黑素瘤细胞等。  In the present invention, a polynucleotide encoding human peroxisome assembly factor-10 or a recombinant vector containing the polynucleotide can be transformed or transduced into a host cell to constitute a genetic engineering containing the polynucleotide or the recombinant vector. Host cell. The term "host cell" refers to a prokaryotic cell, such as a bacterial cell; or a lower eukaryotic cell, such as a yeast cell; or a higher eukaryotic cell, such as a mammalian cell. Representative examples are: Escherichia coli, Streptomyces; bacterial cells such as Salmonella typhimurium; fungal cells such as yeast; plant cells; insect cells such as fly S2 or Sf9; animal cells such as CH0, COS or Bowes melanoma cells.
用本发明所述的 DNA序列或含有所述 DM序列的重组载体转化宿主细胞可 用本领域技术人员熟知的常规技术进行。 当宿主为原核生物如大肠杆菌时, 能 吸收 DNA 的感受态细胞可在指数生长期后收获, 用 CaCl 2法处理, 所用的步骤 在本领域众所周知。 可供选择的是用 MgC l 2。 如果需要, 转化也可用电穿孔的方 法进行。 当宿主是真核生物, 可选用如下的 DNA 转染方法: 磷酸钙共沉淀法, 或者常规机械方法如显微注射、 电穿孔、 脂质体包装等。 Transformation of a host cell with a DNA sequence according to the present invention or a recombinant vector containing the DM sequence can be performed using conventional techniques well known to those skilled in the art. When the host is a prokaryote, such as E. coli, competent cells capable of absorbing DNA can be harvested after the exponential growth phase and treated with the CaCl 2 method. The steps used are well known in the art. The alternative is to use MgC l 2 . If necessary, transformation can also be performed by electroporation. When the host is a eukaryotic organism, the following DNA transfection methods can be used: calcium phosphate co-precipitation method, or conventional mechanical methods such as microinjection, electroporation, and liposome packaging.
通过常规的重组 DNA 技术, 利用本发明的多核苷酸序列可用来表达或生产 重组的人过氧化物酶体装配因子 -10 (Sc ience, 1984 ; 224: 1431)。 一般来说有 以下步骤: By conventional recombinant DNA technology, the polynucleotide sequence of the present invention can be used for expression or production Recombinant human peroxisome assembly factor-10 (Sc ience, 1984; 224: 1431). Generally there are the following steps:
(1) .用本发明的编码人 人过氧化物酶体装配因子 -10 的多核苷酸(或变异 体), 或用含有该多核苷酸的重组表达载体转化或转导合适的宿主细胞;  (1) using the polynucleotide (or variant) encoding human human peroxisome assembly factor-10 of the present invention, or transforming or transducing a suitable host cell with a recombinant expression vector containing the polynucleotide;
(2) .在合适的培养基中培养宿主细胞;  (2) culturing host cells in a suitable medium;
(3) .从培养基或细胞中分离、 纯化蛋白质。  (3) Isolate and purify protein from culture medium or cells.
在步骤 (2 ) 中, 根据所用的宿主细胞, 培养中所用的培养基可选自各种 常规培养基。 在适于宿主细胞生长的条件下进行培养。 当宿主细胞生长到适当 的细胞密度后, 用合适的方法(如温度转换或化学诱导)诱导选择的启动子, 将 细胞再培养一段时间。  In step (2), depending on the host cell used, the medium used in the culture may be selected from various conventional mediums. Culture is performed under conditions suitable for host cell growth. After the host cells have grown to an appropriate cell density, the selected promoter is induced by a suitable method (such as temperature conversion or chemical induction), and the cells are cultured for a period of time.
在步骤 (3 ) 中, 重组多肽可包被于细胞内、 或在细胞膜上表达、 或分泌到 细胞外。 如果需要, 可利用其物理的、 化学的和其它特性通过各种分离方法分 离和纯化重组的蛋白。 这些方法是本领域技术人员所熟知的。 这些方法包括但 并不限于: 常规的复性处理、 蛋白沉淀剂处理(盐析方法)、 离心、 渗透破菌、 超声波处理、 超离心、 分子筛层析(凝胶过滤)、 吸附层析、 离子交换层析、 高 效液相层析(HPLC)和其它各种液相层析技术及这些方法的结合。 附图的简要说明  In step (3), the recombinant polypeptide may be coated in a cell, expressed on a cell membrane, or secreted outside the cell. If desired, recombinant proteins can be separated and purified by various separation methods using their physical, chemical and other properties. These methods are well known to those skilled in the art. These methods include, but are not limited to: conventional renaturation treatment, protein precipitant treatment (salting out method), centrifugation, osmotic disruption, ultrasonic treatment, ultracentrifugation, molecular sieve chromatography (gel filtration), adsorption chromatography, ion Exchange chromatography, high performance liquid chromatography (HPLC) and various other liquid chromatography techniques and combinations of these methods. Brief description of the drawings
下列附图用于说明本发明的具体实施方案, 而不用于限定由权利要求书所 界定的本发明范围。  The following drawings are used to illustrate specific embodiments of the invention, but not to limit the scope of the invention as defined by the claims.
图 1是本发明人过氧化物酶体装配因子 -1 0和人过氧化物酶体装配因子 -1的 基因芯片表达谱比较图。 上图是人过氧化物酶体装配因子 -1 0的表达谱折方图, 下图是人过氧化物酶体装配因子 -1的表达谱折方图。  Fig. 1 is a comparison diagram of gene chip expression profiles of the inventor's peroxisome assembly factor-10 and the human peroxisome assembly factor-1. The upper graph is a graph of the expression profile of the human peroxisome assembly factor -10, and the lower graph is the graph of the expression profile of the human peroxisome assembly factor -1.
图 2 为分离的人过氧化物酶体装配因子 -1 0 的聚丙烯酰胺凝胶电泳图 ( SDS-PAGE ) 。 l OKDa为蛋白质的分子量。 箭头所指为分离出的蛋白条带。 实现本发明的最佳方式  Figure 2 shows the polyacrylamide gel electrophoresis (SDS-PAGE) of the isolated human peroxisome assembly factor-10. OKDa is the molecular weight of the protein. The arrow indicates the isolated protein band. The best way to implement the invention
下面结合具体实施例, 进一步阐述本发明。 应理解, 这些实施例仅用于说 明本发明而不用于限制本发明的范围。 下列实施例中未注明具体条件的实验方 法,通常按照常规条件如 Sambrook等人, 分子克隆:实验室手册(New York: Co l d Spr ing Harbor Labora tory Pres s , 1989)中所述的条件, 或按照制造厂商所建 议的条件。 实施例 1 : 人过氧化物酶体装配因子- 10的克隆 The present invention is further described below with reference to specific embodiments. It should be understood that these examples are only used to illustrate the present invention and not to limit the scope of the present invention. The experimental methods without specific conditions in the following examples are generally in accordance with conventional conditions such as those described in Sambrook et al., Molecular Cloning: Laboratory Manual (New York: Cold Harbor Labora tory Pres s, 1989), Or as recommended by the manufacturer. Example 1: Cloning of human peroxisome assembly factor-10
用异硫氰酸胍 /酚 /氯仿一步法提取人胎脑总 RNA。 用 Quik mRNA Isolat ion Ki t ( Qiegene 公司产品) 从总 RNA中分离 poly (A) mRNA。 2ug poly (A) mRNA经逆转录 形成 cDNA。用 Smart cDNA克隆试剂盒(购自 Clontech )将 cDNA片段定向插入到 pBSK (+) 载体(Clontech公司产品)的多克隆位点上, 转化 DH5 a , 细菌形成 cDNA文库。 用 Dye terminate cycle react ion sequencing ki t (Perkin - Elmer公司产品) 禾口 ABI 377自 动测序仪 (Perkin- Elmer公司)测定所有克隆的 5'和 3'末端的序列。 将测定的 cDNA序 列与已有的公共 DNA序列数据库 (Genebank ) 进行比较, 结果发现其中一个克隆 0653g05的 cDNA序列为新的 DNA。 通过合成一系列引物对该克隆所含的插入 cDNA片段 进行双向测定。 结果表明, 0653g05克隆所含的全长 cDNA为 2567bp (如 Seq ID NO: 1 所示) , 从第 119bp至 397bp有一个 279bp的开放阅读框架 ( 0RF ) , 编码一个新的蛋 白质 (如 Seq ID NO: 2所示) 。 我们将此克隆命名为 pBS- 0653g05 , 编码的蛋白质命 名为人过氧化物酶体装配因子- 10。 实施例 2: 用 RT-PCR方法克隆编码人过氧化物酶体装配因子 -10的基因  Human fetal brain total RNA was extracted by one-step method with guanidine isothiocyanate / phenol / chloroform. Poly (A) mRNA was isolated from total RNA using Quik mRNA Isolat ion Kit (product of Qiegene). 2ug poly (A) mRNA is reverse transcribed to form cDNA. The Smart cDNA cloning kit (purchased from Clontech) was used to insert the cDNA fragment into the multiple cloning site of pBSK (+) vector (Clontech) to transform DH5a. The bacteria formed a cDNA library. Dye terminate cycle reaction ion sequencing kit (Perkin-Elmer) and ABI 377 automatic sequencer (Perkin-Elmer) were used to determine the sequences at the 5 'and 3' ends of all clones. The determined cDNA sequence was compared with the existing public DNA sequence database (Genebank), and it was found that the cDNA sequence of one of the clones 0653g05 was new DNA. The inserted cDNA fragment contained in this clone was determined in both directions by synthesizing a series of primers. The results show that the 0653g05 clone contains a full-length cDNA of 2567bp (as shown in Seq ID NO: 1), and has a 279bp open reading frame (0RF) from 119bp to 397bp, encoding a new protein (such as Seq ID NO : Shown in 2). We named this clone pBS-0653g05, and the encoded protein was named human peroxisome assembly factor-10. Example 2: Cloning of a gene encoding human peroxisome assembly factor-10 by RT-PCR
用胎脑细胞总 RNA为模板, 以 ol igo- dT为引物进行逆转录反应合成 cDNA,用 Qiagene的试剂盒纯化后,用下列引物进行 PCR扩增:  CDNA was synthesized using fetal brain cell total RNA as a template and ol igo-dT as a primer for reverse transcription reaction. After purification with Qiagene's kit, the following primers were used for PCR amplification:
Pr imerl: 5'- GGAGGTTCCCACTATGAGCCCGGA -3' (SEQ ID NO: 3)  Pr imerl: 5'- GGAGGTTCCCACTATGAGCCCGGA -3 '(SEQ ID NO: 3)
Pr imer2: 5'- TGTAAAATAATGTATTTTTATTCA -3, (SEQ ID NO: 4)  Pr imer2: 5'- TGTAAAATAATGTATTTTTATTCA -3, (SEQ ID NO: 4)
Primerl为位于 SEQ ID NO: 1的 5,端的第 lbp开始的正向序列;  Primerl is a forward sequence starting at lbp of the 5th end of SEQ ID NO: 1;
Pr imer2为 SEQ ID NO: 1的中的 3'端反向序列。  Pr imer2 is the 3'-end reverse sequence in SEQ ID NO: 1.
扩增反应的条件: 在 50 μ 1的反应体积中含有 50醒 ol/L KC1, 10mmol/L Tr is- Cl,(pH8. 5) , 1. 5隱01/1^ MgCl2, 200 μ mol/L dNTP, l Opmol引物, 1U的 Taq DNA聚合酶 (Clontech公司产品)。 在 PB9600型 DNA热循环仪(Perkin- Elmer公司)上按下列条件 反应 25个周期: 94°C 30sec; 55。C 30sec; 72。C 2min0 在 RT-PCR时同时设 β -act in 为阳性对照和模板空白为阴性对照。 扩增产物用 QIAGEN公司的试剂盒纯化, 用 TA克 隆试剂盒连接到 pCR载体上 ( Invi trogen公司产品) 。 DNA序列分析结果表明 PCR产 物的 DM序列与 SEQ ID N0: 1所示的 1- 2567bp完全相同。 实施例 3: Northern 印迹法分析人过氧化物酶体装配因子- 10基因的表达: Amplification conditions: 50 μl of KC1, 10 mmol / L Tris-Cl, (pH 8.5.5), 1.5 μg / 1/1 MgCl 2 , 200 μ mol in a reaction volume of 50 μ 1 / L dNTP, l Opmol primer, 1U Taq DNA polymerase (Clontech). 25 cycles were performed on a PB9600 DNA thermal cycler (Perkin-Elmer) under the following conditions: 94 ° C 30sec; 55. C 30sec; 72. For C 2min 0 , β-act in was used as a positive control and template blank was used as a negative control at the same time during RT-PCR. The amplified product was purified using a QIAGEN kit, and ligated to a pCR vector (Invitrogen) using a TA cloning kit. DNA sequence analysis results showed that the DM sequence of the PCR product was exactly the same as that of 1-2567bp shown in SEQ ID NO: 1. Example 3: Northern blot analysis of human peroxisome assembly factor-10 gene expression:
用一步法提取总 RM [Anal. Biochem 1987, 162, 156-159]。 该法包括酸性硫氰 酸胍苯酚-氯仿抽提。 即用 4M异硫氰酸胍- 25mM柠檬酸钠, 0. 2M乙酸钠 ( pH4. 0 ) 对 组织进行匀浆, 加入 1倍体积的苯酚和 1/5体积的氯仿-异戊醇 (49: 1 ) , 混合后离 心。 吸出水相层, 加入异丙醇 (0.8体积) 并将混合物离心得到 RNA沉淀。 将得到的 RNA沉淀用 70%乙醇洗涤, 干燥并溶于水中。 用 2()μ§ ίΜ, 在含 20mM 3- ( Ν-吗啉代) 丙磺酸(pH7.0 ) - 5mM乙酸钠 - ImM EDTA-2.2M甲醛的 1.2%琼脂糖凝胶上进行电泳。 然后转移至硝酸纤维素膜上。 用 a- 32P dATP通过随机引物法制备 32P-标记的 DNA探 针。 所用的 DNA探针为图 1所示的 PCR扩增的人过氧化物酶体装配因子- 10编码区序列 (119bp至 397bp)。 将 32P-标记的探针 (约 2 χ 106cpm/ml ) 与转移了 RNA的硝酸纤维 素膜在一溶液中于 42°C杂交过夜, 该溶液包含 50%甲酰胺 - 25mM KH2P04 ( pH7.4 ) -5 χ SSC- 5 χ Denhardt's溶液和 200 μ g/ml鲑精 DNA。 杂交之后, 将滤膜在 l x SSC- G.1%SDS中于 55°C洗 30min。 然后, 用 Phosphor Imager进行分析和定量。 Total RM extraction in one step [Anal. Biochem 1987, 162, 156-159]. This method involves acid guanidinium thiocyanate phenol-chloroform extraction. 4M guanidine isothiocyanate-25mM sodium citrate, 0.2M sodium acetate (pH4.0) Tissues were homogenized, 1 volume of phenol and 1/5 volume of chloroform-isoamyl alcohol (49: 1) were added, mixed and centrifuged. Aspirate the aqueous layer, add isopropanol (0.8 vol) and centrifuge the mixture to obtain RNA precipitate. The resulting RNA pellet was washed with 70% ethanol, dried and dissolved in water. Electrophoresis was performed on a 1.2% agarose gel containing 2 mM μ § ΙΜ containing 20 mM 3- (N-morpholino) propanesulfonic acid (pH 7.0)-5 mM sodium acetate-1 mM EDTA-2.2M formaldehyde. It was then transferred to a nitrocellulose membrane. Preparation 32 P- DNA probe labeled with a- 32 P dATP by random priming method. The DNA probe used was the PCR amplified human peroxisome assembly factor-10 coding region sequence (119bp to 397bp) shown in FIG. 1. A 32P-labeled probe (approximately 2 x 10 6 cpm / ml) was hybridized with a nitrocellulose membrane to which RNA was transferred at 42 ° C overnight in a solution containing 50% formamide-25mM KH 2 P0 4 (pH 7.4) -5 x SSC-5 x Denhardt's solution and 200 μg / ml salmon sperm DNA. After hybridization, the filter was washed in 1x SSC-G.1% SDS at 55 ° C for 30 min. Then, Phosphor Imager was used for analysis and quantification.
实施例 4: 重组人过氧化物酶体装配因子 -10的体外表达、 分离和纯化 Example 4: In vitro expression, isolation and purification of recombinant human peroxisome assembly factor-10
根据 SEQ ID NO: 1和图 1所示的编码区序列, 设计出一对特异性扩增引物, 序 列如下:  Based on SEQ ID NO: 1 and the coding region sequence shown in Figure 1, a pair of specific amplification primers were designed, the sequence is as follows:
Primer3: 5'- CATGCTAGCATGTGGTACATATACAAAATGGAG -3, ( Seq ID No: 5 ) Primer4: 5'- CCCGAATTCTCAGGAGCAGTCCTCTTTTATTAT -3' (Seq ID No: 6 ) 此两段引物的 5'端分别含有 Nhel和 EcoRI酶切位点, 其后分别为目的基因 5'端 和 3'端的编码序列, Nhel和 EcoRI酶切位点相应于表达载体质粒 pET- 28b (+) (Novagen 公司产品, Cat. No.69865.3)上的选择性内切酶位点。 以含有全长目的基因的 pBS- 0653g05质粒为模板, 进行 PCR反应。 PCR反应条件为: 总体积 50 μ 1中含 pBS- 0653g05 质粒 10pg、 引物?1^11161:-3和?1^1116]:-4分另|为1(^0101、 Advantage polymerase Mix (Clontech公司产品) 1 μ 1。 循环参数: 94。C 20s, 60°C 30s, 68°C 2 min,共 25个 循环。 用 Nhel和 EcoRI分别对扩增产物和质粒 pET-28(+)进行双酶切,分别回收大片 段,并用 T4连接酶连接。 连接产物转化用氯化钙法大肠杆细菌 DH5 α,在含卡那霉素 (终浓度 30 μ g/ml ) 的 LB平板培养过夜后, 用菌落 PCR方法筛选阳性克隆, 并进行 测序。 挑选序列正确的阳性克隆 (pET- 0653g05 )用氯化钙法将重组质粒转化大肠 杆菌 BL21 (DE3)plySs (Novagen公司产品)。 在含卡那霉素 (终浓度 30 μ g/ml ) 的 LB 液体培养基中, 宿主菌 BL21 (pET- 0653g05 ) 在 37。C培养至对数生长期, 加入 IPTG 至终浓度 1誦 ol/L, 继续培养 5小时。 离心收集菌体, 经超声波破菌,离心收集上清, 用能与 6个组氨酸( 6His-Tag )结合的亲和层析柱 His. Bind Quick Cartridge( Novagen 公司产品) 进行层析, 得到了纯化的目的蛋白人过氧化物酶体装配因子 -10。 经 SDS-PAGE电泳, 在 lOKDa处得到一单一的条带 (图 2) 。 将该条带转移至 PVDF膜上用 Edams水解法进行 N-端氨基酸序列分析, 结果 N-端 15个氨基酸与 SEQ ID NO: 2所示的 N -端 15个氨基酸残基完全相同。 Primer3: 5'- CATGCTAGCATGTGGTACATATACAAAATGGAG -3, (Seq ID No: 5) Primer4: 5'- CCCGAATTCTCAGGAGCAGTCCTCTTTTATTATT -3 '(Seq ID No: 6) The 5' ends of these two primers contain Nhel and EcoRI restriction sites, respectively. The coding sequences of the 5 'and 3 ' ends of the gene of interest are followed, respectively. The Nhel and EcoRI restriction sites correspond to the selectivity within the expression vector plasmid pET-28b (+) (Novagen, Cat. No. 69865.3). Digestion site. The pBS-0653g05 plasmid containing the full-length target gene was used as a template for the PCR reaction. The PCR reaction conditions are as follows: a total volume of 50 μ1 contains 10 pg of pBS-0653g05 plasmid, primers? 1 ^ 11161: -3 and? 1 ^ 1116]: -4 points and 1 | ^ 1, Advantage polymerase Mix (Clontech) 1 μ 1. Cycle parameters: 94.C 20s, 60 ° C 30s, 68 ° C 2 min, a total of 25 Recycling. Digestion of the amplified product and plasmid pET-28 (+) with Nhel and EcoRI, respectively, to recover large fragments and ligate them with T4 ligase. The ligation products were transformed by the calcium chloride method of coliform bacteria DH5 α. After the LB plates containing kanamycin (final concentration 30 μg / ml) were cultured overnight, the positive clones were screened by colony PCR method and sequenced. The positive clones with the correct sequence (pET-0653g05) were selected by calcium chloride method. The recombinant plasmid was transformed into E. coli BL21 (DE3) plySs (product of Novagen). In a LB liquid medium containing kanamycin (final concentration 30 μg / ml), the host strain BL21 (pET-0653g05) was at 37 ° C. Cultivate to the logarithmic growth phase, add IPTG to a final concentration of 1 ol / L, and continue the cultivation for 5 hours. Centrifuge the bacterial cells to collect them by centrifugation, sonicate, and collect the supernatant by centrifugation with 6 histidine (6His-Tag ) Binding affinity chromatography column His. Bind Quick Cartridge (product of Novagen company) The purified human protein peroxisome assembly factor-10 was obtained. After SDS-PAGE electrophoresis, a single band was obtained at lOKDa (Figure 2). The band was transferred to a PVDF membrane using the Edams hydrolysis method. Analysis of the N-terminal amino acid sequence, the 15 amino acids at the N-terminus are shown in SEQ ID NO: 2 The N-terminal 15 amino acid residues are identical.
实施例 5 抗人过氧化物酶体装配因子 -10抗体的产生 Example 5 Production of anti-human peroxisome assembly factor-10 antibodies
用多肽合成仪 (PE公司产品) 合成下述人过氧化物酶体装配因子 -10特异性的 多肽:  A peptide synthesizer (product of PE company) was used to synthesize the following human peroxisome assembly factor-10 specific peptides:
NH2-Met-Trp-Tyr-I le-Tyr-Lys-Met-Glu-Tyr-Tyr-Ser-Ala-Val-Lys-Lys-COOH (SEQ ID NO: 7)。 将该多肽分别与血蓝蛋白和牛血清白蛋白耦合形成复合, 方法参 见: Avrameas, et al. Imraunochemis try, 1969; 6: 43„ 用 4mg上述血蓝蛋白多肽复合 物加上完全弗氏佐剂免疫家兔, 15天后再用血蓝蛋白多肽复合物加不完全弗氏佐剂 加强免疫一次。 釆用经 15 g/ml牛血清白蛋白多肽复合物包被的滴定板做 ELISA测 定兔血清中抗体的滴度。 用蛋白 A-Sepharose从抗体阳性的家兔血清中分离总 IgG。 将多肽结合于溴化氰活化的 Sephar0Se4B柱上, 用亲和层析法从总 IgG中分离抗多肽 抗体。 免疫沉淀法证明纯化的抗体可特异性地与人过氧化物酶体装配因子 -10结合。 实施例 6: 本发明的多核苷酸片段用作杂交探针的应用 NH2-Met-Trp-Tyr-I le-Tyr-Lys-Met-Glu-Tyr-Tyr-Ser-Ala-Val-Lys-Lys-COOH (SEQ ID NO: 7). The peptide was coupled with hemocyanin and bovine serum albumin to form a complex. For the method, see: Avrameas, et al. Imraunochemis try, 1969; 6: 43 „Immunize with 4mg of the hemocyanin peptide complex and complete Freund's adjuvant. For rabbits, 15 days later, use the hemocyanin peptide complex plus incomplete Freund's adjuvant to boost the immunity once. ELISA Use a titration plate coated with 15 g / ml bovine serum albumin peptide complex for ELISA to determine the antibody in rabbit serum. Isolate total IgG from antibody-positive rabbit serum with protein A-Sepharose. Bind the peptide to a cyanogen bromide-activated Sepha r0Se 4B column and isolate anti-peptide antibodies from the total IgG by affinity chromatography The immunoprecipitation method proved that the purified antibody can specifically bind to human peroxisome assembly factor-10. Example 6: Application of the polynucleotide fragment of the present invention as a hybridization probe
从本发明的多核苷酸中挑选出合适的寡核苷酸片段用作杂交探针有多方面的 用途, 如用该探针可与不同来源的正常组织或病理组织的基因组或 cDNA文库杂交 以鉴定其是否含有本发明的多核苷酸序列和检出同源的多核苷酸序列,进一步还可 用该探针检测本发明的多核苷酸序列或其同源的多核苷酸序列在正常组织或病理 组织细胞中的表达是否异常。  Suitable oligonucleotide fragments selected from the polynucleotides of the present invention are used as hybridization probes in a variety of ways. For example, the probes can be used to hybridize to genomic or cDNA libraries of normal tissue or pathological tissue from different sources to It is determined whether it contains the polynucleotide sequence of the present invention and a homologous polynucleotide sequence is detected. Further, the probe can be used to detect the polynucleotide sequence of the present invention or its homologous polynucleotide sequence in normal tissue or pathology. Whether the expression in tissue cells is abnormal.
本实施例的目的是从本发明的多核苷酸 SEQ ID NO: 1 中挑选出合适的寡核苷 酸片段用作杂交探针, 并用滤膜杂交方法鉴定一些组织中是否含有本发明的多核 苷酸序列或其同源的多核苷酸序列。 滤膜杂交方法包括斑点印迹法、 Southern 印 迹法、 Northern 印迹法和复印方法等, 它们都是将待测的多核苷酸样品固定在滤 膜上后使用基本相同的步骤杂交。 这些相同的步骤是: 固定了样品的滤膜首先用 不含探针的杂交缓冲液进行预杂交, 以使滤膜上样品的非特异性的结合部位被载 体和合成的多聚物所饱和。 然后预杂交液被含有标记探针的杂交缓冲液替换, 并 保温使探针与靶核酸杂交。 杂交步骤之后, 未杂交上的探针被一系列洗膜步骤除 掉。 本实施例利用较高强度的洗膜条件(如较低盐浓度和较高的温度), 以使杂交 背景降低且只保留特异性强的信号。 本实施例选用的探针包括两类: 第一类探针 是完全与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段; 第二类探 针是部分与本发明的多核苷酸 SEQ ID NO: 1相同或互补的寡核苷酸片段。 本实施 例选用斑点印迹法将样品固定在滤膜上, 在较高强度的的洗膜条件下, 第一类探 针与样品的杂交特异性最强而得以保留。 一、 探针的选用 The purpose of this embodiment is to select a suitable oligonucleotide fragment from the polynucleotide SEQ ID NO: 1 of the present invention as a hybridization probe, and to identify whether some tissues contain the polynucleoside of the present invention by a filter hybridization method. Acid sequence or a homologous polynucleotide sequence thereof. Filter hybridization methods include dot blotting, Southern blotting, Northern blotting, and copying methods. They all use the same steps of hybridization after fixing the polynucleotide sample to be tested on the filter. These same steps are as follows: The sample-immobilized filter is first pre-hybridized with a probe-free hybridization buffer, so that the non-specific binding site of the sample on the filter is saturated with the carrier and the synthetic polymer. The pre-hybridization solution is then replaced with a hybridization buffer containing the labeled probe and incubated to hybridize the probe to the target nucleic acid. After the hybridization step, the unhybridized probes are removed by a series of membrane washing steps. This embodiment utilizes higher-intensity washing conditions (such as lower salt concentration and higher temperature) to reduce the hybridization background and retain only strong specific signals. The probes used in this embodiment include two types: the first type of probes are oligonucleotide fragments that are completely the same as or complementary to the polynucleotide SEQ ID NO: 1 of the present invention; the second type of probes are partially related to the present invention The polynucleotide SEQ ID NO: 1 is the same or complementary oligonucleotide fragment. In this embodiment, the dot blot method is used to fix the sample on the filter membrane. Under the high-intensity washing conditions, the first type of probe and the sample have the strongest hybridization specificity and are retained. First, the selection of the probe
从本发明的多核苷酸 SEQ ID NO: 1 中选择寡核苷酸片段用作杂交探针, 应遵 循以下原则和需要考虑的几个方面:  The selection of oligonucleotide fragments for use as hybridization probes from the polynucleotide SEQ ID NO: 1 of the present invention should follow the following principles and several aspects to be considered:
1, 探针大小优选范围为 18- 50个核苷酸; 1. The preferred range of probe size is 18-50 nucleotides;
2, GC含量为 30%- 70%, 超过则非特异性杂交增加; 2, GC content is 30% -70%, non-specific hybridization increases when it exceeds;
3, 探针内部应无互补区域; 3. There should be no complementary regions inside the probe;
4, 符合以上条件的可作为初选探针, 然后进一步作计算机序列分析, 包括将该 初选探针分别与其来源序列区域 (即 SEQ ID NO: 1)和其它已知的基因组序列 及其互补区进行同源性比较, 若与非靶分子区域的同源性大于 85%或者有超过 15个连续碱基完全相同, 则该初选探针一般就不应该使用;  4. Those that meet the above conditions can be used as primary selection probes, and then further computer sequence analysis, including the primary selection probe and its source sequence region (ie, SEQ ID NO: 1) and other known genomic sequences and their complements The regions are compared for homology. If the homology with the non-target molecular region is greater than 85% or there are more than 15 consecutive bases, the primary probe should not be used;
5, 初选探针是否最终选定为有实际应用价值的探针还应进一步由实验确定。  5. Whether the preliminary selection probe is finally selected as a probe with practical application value should be further determined by experiments.
完成以上各方面的分析后挑选并合成以下二个探针: '  After completing the above analysis, select and synthesize the following two probes: ''
探针 1 (probel), 属于第一类探针, 与 SEQ ID NO: 1 的基因片段完全 同源或互补(41Nt):  Probe 1 (probel), which belongs to the first type of probe, is completely homologous or complementary to the gene fragment of SEQ ID NO: 1 (41Nt):
5- TGTGGTACATATACAAAATGGAGTACTATTCAGCTGTAAAA -3' (SEQ ID NO: 8)  5- TGTGGTACATATACAAAATGGAGTACTATTCAGCTGTAAAA -3 '(SEQ ID NO: 8)
探针 2 (probe2 ), 属于第二类探针, 相当于 SEQ ID NO: 1 的基因片段 或其互补片段的替换突变序列 (41Nt):  Probe 2 (probe2), which belongs to the second type of probe, is equivalent to the replacement mutant sequence (41Nt) of the gene fragment of SEQ ID NO: 1 or its complementary fragment:
5'- TGTGGTACATATACAAAATGCAGTACTATTCAGCTGTAAAA -3' ( SEQ ID NO: 9 ) 与以下具体实验步骤有关的其它未列出的常用试剂及其配制方法请参考文 献: DNA PROBES G. H. Kel ler; Μ· Μ· Manak; Stockton Press, 1989 (USA)以及更常用 的分子克隆实验手册书籍如 《分子克隆实验指南》 U998 年第二版) [美]萨姆布 鲁克等著, 科学出版社。  5'- TGTGGTACATATACAAAATGCAGTACTATTCAGCTGTAAAA -3 '(SEQ ID NO: 9) For other commonly used reagents and their preparation methods not related to the following specific experimental procedures, please refer to the literature: DNA PROBES GH Kel ler; Μ · Μ · Manak; Stockton Press , 1989 (USA) and more commonly used molecular cloning laboratory manuals such as "Molecular Cloning Experiment Guide" U998 2nd Edition. [US] Sambrook et al., Science Press.
样品制备:  Sample Preparation:
1, 从新鲜或冰冻组织中提取 DM  1.Extract DM from fresh or frozen tissue
步骤: 1) 将新鲜或新鲜解冻的正常肝组织放入浸在冰上并盛有磷酸盐缓冲液 Steps: 1) Put fresh or freshly thawed normal liver tissue on ice and hold phosphate buffered saline
(PBS) 的平皿中。 用剪刀或手术刀将组织切成小块。 操作中应保持组织湿润。 2) 以 1000g离心切碎组织 10分钟。 3)用冷匀浆缓冲液 (0.25mol/L蔗糖; 25瞧 ol/L(PBS). Cut the tissue into small pieces with scissors or a scalpel. Keep tissue moist during operation. 2) Centrifuge the tissue at 1000g for 10 minutes. 3) Use cold homogenization buffer (0.25mol / L sucrose; 25 ol / L
Tris-HCl,pH7.5; 25ramol/LnaCl; 25薩 ol/L MgCl2 ) 悬浮沉淀 (大约 10ml/g)。 4) 在 4°C用电动匀浆器以全速匀浆组织悬液, 直至组织被完全破碎。 5 ) 1000g 离心 10分钟。 6) 用重悬细胞沉淀(每 O. lg最初组织样品加 1- 5ml ), 再以 lOOOg离心Tris-HCl, pH 7.5; 25ramol / LnaCl; 25 saol / L MgCl 2 ) Suspended precipitate (about 10ml / g). 4) Homogenize the tissue suspension at 4 ° C at full speed with an electric homogenizer until the tissue is completely broken. 5) Centrifuge at 1000g for 10 minutes. 6) Resuspend the cell pellet (1-5ml per 0.1 g of the original tissue sample), and centrifuge at 1,000 g
10分钟。 7)用裂解缓冲液重悬沉淀(每 O. lg最初组织样品加 lral), 然后接以下 的苯酚抽提法。 2, DNA的苯酚抽提法 10 minutes. 7) Resuspend the pellet with lysis buffer (add lral per 0.1 g of the initial tissue sample), and then follow the phenol extraction method below. 2, DNA phenol extraction method
步骤: 1 )用 l-10ml冷 MS洗细胞, lOOOg离心 10分钟。 2)用冷细胞裂解液 重悬浮沉淀的细胞 ( 1 X 108细胞 /ml ) 最少应用 lOOul 裂解缓冲液。 3 )加 SDS 至 终浓度为 1%, 如果在重悬细胞之前将 SDS直接加入到细胞沉淀中, 细胞可能会形 成大的团块而难以破碎, 并降低的总产率。 这一点在抽提 >107细胞时特别严重。 4) 加蛋白酶 K至终浓度 200ug/ml。 5) 50°C保温反应 1小时或在 37°C轻轻振摇过夜。 6)用等体积苯酚: 氯仿: 异戊醇 ( 25: 24: 1)抽提, 在小离心机管中离心 10分 钟。 两相应清楚分离, 否则重新进行离心。 7) 将水相转移至新管。 8) 用等体积 氯仿: 异戊醇 (24: 1)抽提, 离心 10分钟。 9)将含 DM的水相转移至新管。 然 后进行 DNA的纯化和乙醇沉淀。 Steps: 1) Wash the cells with 1-10ml cold MS and centrifuge at 1000g for 10 minutes. 2) with cold cell lysate pelleted cells were resuspended (1 X 10 8 cells / ml) Minimum application lOOul lysis buffer. 3) Add SDS to a final concentration of 1%. If SDS is directly added to the cell pellet before resuspending the cells, the cells may form large clumps that are difficult to break, and reduce the overall yield. This is particularly serious when extracting> 10 7 cells. 4) Add proteinase K to a final concentration of 200ug / ml. 5) Incubate at 50 ° C for 1 hour or shake gently at 37 ° C overnight. 6) Extract with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge in a small centrifuge tube for 10 minutes. The two should be clearly separated, otherwise centrifuge again. 7) Transfer the water phase to a new tube. 8) Extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 9) Transfer the aqueous phase containing DM to a new tube. The DNA was then purified and ethanol precipitated.
3, DM的纯化和乙醇沉淀 3. Purification and ethanol precipitation of DM
步骤: 1 )将 1/10体积 2mol/L醋酸钠和 2倍体积冷 100%乙醇加到 DNA溶液中, 混匀。 在- 20°C放置 1小时或至过夜。 2) 离心 10分钟。 3)小心吸出或倒出乙醇。 4)用 70%冷乙醇 500ul洗涤沉淀, 离心 5分钟。 5)小心吸出或倒出乙醇。 用 500ul 冷乙醇洗涤沉淀, 离心 5分钟。 6)小心吸出或倒出乙醇, 然后在吸水纸上倒置使 残余乙醇流尽。 空气干燥 10-15 分钟, 以使表面乙醇挥发。 注意不要使沉淀完全 干燥, 否则较难重新溶解。 7) 以小体积 TE或水重悬丽沉淀。 低速涡旋振荡或 用滴管吹吸, 同时逐渐增加 TE, 混合至 DNA充分溶解, 每 1-5 x lO6细胞所提取的 大约加 lul。 Steps: 1) Add 1/10 volume of 2mol / L sodium acetate and 2 volumes of cold 100% ethanol to the DNA solution and mix. Leave at -20 ° C for 1 hour or overnight. 2) Centrifuge for 10 minutes. 3) Carefully aspirate or pour out the ethanol. 4) Wash the pellet with 500ul of 70% cold ethanol and centrifuge for 5 minutes. 5) Carefully aspirate or pour out the ethanol. Wash the pellet with 500ul of cold ethanol and centrifuge for 5 minutes. 6) Carefully aspirate or pour out the ethanol, then invert on the absorbent paper to drain off the residual ethanol. Air dry for 10-15 minutes to allow the surface ethanol to evaporate. Be careful not to allow the pellet to dry completely, otherwise it will be more difficult to re-dissolve. 7) Resuspend the pellet in a small volume of TE or water. Vortex at low speed or pipette with suction while gradually increasing TE, mix until the DNA is fully lysed, add approximately 1 ul per 1-5 x lO 6 cells extracted.
以下第 8-13步骤仅用于必须除去污染时, 否则可直接进行第 14步骤。  The following steps 8-13 are only used when contamination must be removed, otherwise step 14 can be performed directly.
8 )将 RNA酶 A加到 DNA溶液中, 终浓度为 100ug/ml, 37°C保温 30分钟。 9 ) 加 入 SDS和蛋白酶 K, 终浓度分别为 0.5%和 100ug/ml。 37°C保温 30分钟。 10)用 等体积的苯酚: 氯仿: 异戊醇 ( 25: 24: 1 )抽提反应液, 离心 10 分钟。 11)小 心移出水相, 用等体积的氯仿: 异戊醇 (24: 1) 重新抽提, 离心 10 分钟。 12) 小心移出水相, 加 1/10体积 2mol/L醋酸钠和 2.5体积冷乙醇, 混匀置 -20°C 1小 时。 13)用 70%乙醇及 100%乙醇洗涤沉淀, 空气干燥, 重悬核酸, 过程同第 3-6 步骤。 14)测定 A26。和 A28。以检测 DNA的纯度及产率。 15)分装后存放于 - 20°C。 样膜的制备: 8) Add RNase A to the DNA solution to a final concentration of 100ug / ml, and incubate at 37 ° C for 30 minutes. 9) Add SDS and proteinase K to the final concentration of 0.5% and 100ug / ml. Incubate at 37 ° C for 30 minutes. 10) Extract the reaction solution with an equal volume of phenol: chloroform: isoamyl alcohol (25: 24: 1) and centrifuge for 10 minutes. 11) Carefully remove the aqueous phase and re-extract with an equal volume of chloroform: isoamyl alcohol (24: 1) and centrifuge for 10 minutes. 12) Carefully remove the aqueous phase, add 1/10 volume of 2mol / L sodium acetate and 2.5 volumes of cold ethanol, and mix well at -20 ° C for 1 hour. 13) Wash the pellet with 70% ethanol and 100% ethanol, air dry, and resuspend the nucleic acid. The process is the same as steps 3-6. 14) Determine A 26 . And A 28 . To detect the purity and yield of DNA. 15) Store at -20 ° C after dispensing. Preparation of sample film:
1)取 4 x 2 张适当大小的硝酸纤维素膜 (NC膜), 用铅笔在其上轻轻标出点样 位置及样号, 每一探针需两张 NC膜, 以便在后面的实验步骤中分别用高强度条件 和强度条件洗膜 。  1) Take 4 x 2 pieces of nitrocellulose membrane (NC membrane) of appropriate size, and mark the spotting position and sample number on it with a pencil. Two NC membranes are needed for each probe for later experiments. In the step, the film is washed with high-strength conditions and strength conditions, respectively.
2) 吸取及对照各 15微升, 点于样膜上, 在室温中晾干。 3 )置于浸润有 0. Imol/LNaOH, 1.5mol/LNaCl 的滤纸上 5分钟 (两次), 晾干置 于浸润有 0.5mol/L Tris-HCl ( H7.0 ), 3mol/LNaCl 的滤纸上 5分钟 (两次), 晾 干。 2) Pipette and control 15 μl each, spot on the sample film, and dry at room temperature. 3) Place on filter paper impregnated with 0.1 mol / L NaOH, 1.5 mol / L NaCl for 5 minutes (twice), dry and place on filter paper impregnated with 0.5 mol / L Tris-HCl (H7.0), 3 mol / L NaCl Allow to dry for 5 minutes (twice).
4)夹于干净滤纸中, 以铝箔包好, 60- 80°C真空干燥 2小时。  4) Clamped in clean filter paper, wrapped in aluminum foil, and dried under vacuum at 60-80 ° C for 2 hours.
探针的标记  Labeling of probes
1 ) 3 μ lProbe ( 0.10D/10 μ 1 ), 加入 2 μ IKinase缓冲液, 8-10 uCi y-32P-dATP+2U Kinase, 以补加至终体积 20 μ 1。 1) 3 μl Probe (0.10D / 10 μ 1), add 2 μ IKinase buffer, 8-10 uCi y- 32 P-dATP + 2U Kinase, to make up to a final volume of 20 μ 1.
2) 37 °C 保温 2小时。  2) Incubate at 37 ° C for 2 hours.
3)加 1/5体积的溴酚蓝指示剂 (BPB)。  3) Add 1/5 volume of Bromophenol Blue Indicator (BPB).
4 )过 Sephadex G— 50柱。  4) Pass Sephadex G-50 column.
5 ) 至有 32P- Probe洗出前开始收集第一峰(可用 Monitor监测)。 5) Before the 32 P-Probe is washed out, start collecting the first peak (can be monitored by Monitor).
6) 5滴 /管, 收集 10- 15管。  6) 5 drops / tube, collect 10-15 tubes.
7)用液体闪烁仪监测同位素量  7) Monitor the amount of isotope with a liquid scintillator
8 ) 合并第一峰的收集液后即为所需制备的 32P- Probe (第二峰为游离 γ_32Ρ- dATP )0 8) were collected after the first peak were combined to prepare the desired 32 P- Probe (second peak as the free γ_ 32 Ρ- dATP) 0
预杂交  Pre-hybridization
将样膜置于塑料袋中,加入 3-10mg预杂交液(10xDenhardt's;6xSSC, 0. lmg/ral CT DNA (小牛胸腺 DNA)。), 封好袋口后, 68。C水洛摇 2小时。 The sample film was placed in a plastic bag pre-hybridization solution was added 3-10m g (10xDenhardt's;. 6xSSC, 0. lmg / ral CT DNA ( the DNA calf thymus)), after a good seal bag 68. C. Water shake for 2 hours.
杂交  Cross
将塑料袋剪去一角, 加入制备好的探针, 封好袋口后, 42°C水洛摇过夜。 洗膜:  Cut a corner of the plastic bag, add the prepared probe, seal the bag, and shake at 42 ° C in water overnight. Wash film:
高强度洗膜:  High-intensity washing film:
1 )取出巳杂交好的样膜。  1) Take out the sample membrane of hybridization.
2 ) 2xSSC, 0.1%SDS中, 40。C洗 15分钟 ( 2次)。  2) 2xSSC, 0.1% SDS, 40. C Wash for 15 minutes (twice).
3 ) 0. lxSSC, 0.1 SDS中, 40。C洗 15分钟 ( 2次)。  3) 0.1xSSC, 0.1 SDS, 40. C wash for 15 minutes (twice).
4 ) 0. lxSSC, 0.1¾SDS中, 55°C洗 30分钟 ( 2次), 室温晾干。 低强度洗膜:  4) In 0.1xSSC, 0.1¾SDS, wash at 55 ° C for 30 minutes (twice), and dry at room temperature. Low-intensity washing film:
1) 取出已杂交好的样膜。  1) Take out the hybridized sample membrane.
2 ) 2xSSC, 0. P/oSDS中, 37。C洗 15分钟 ( 2次)。  2) 2xSSC, 0. P / oSDS, 37. C wash for 15 minutes (twice).
3 ) 0. lxSSC, 0.1 SDS中, 37°C洗 15分钟 ( 2次)。  3) In 0.1xSSC, 0.1 SDS, wash at 37 ° C for 15 minutes (twice).
4) 0. lxSSC, 0.1%SDS中, 40°C洗 15分钟 ( 2次), 室温晾干。 X-光自显影: 4) Wash in 0.1xSSC, 0.1% SDS at 40 ° C for 15 minutes (twice), and dry at room temperature. X-ray auto-development:
-70°C, X-光自显影 (压片时间根据杂交斑放射性强弱而定)。  -70 ° C, X-ray autoradiography (pressing time depends on the radioactivity of the hybrid spot).
实验结果:  Experimental results:
采用低强度洗膜条件所进行的杂交实验, 以上两个探针杂交斑放射性强弱没 有明显区别; 而采用高强度洗膜条件所进行的杂交实验, 探针 1 的杂交斑放射性 强度明显强于另一个探针杂交斑的放射性强度。 因而可用探针 1 定性和定量地分 析本发明的多核苷酸在不同组织中的存在和差异表达。 实施例 7 DNA Microarray  The hybridization experiments performed under low-intensity membrane washing conditions showed no significant difference in the radioactive intensity of the above two probes. However, in the hybridization experiments performed under high-intensity membrane washing conditions, the radioactive intensity of probe 1 was significantly stronger than that of hybridization spots. The radioactive intensity of the hybridization spot of the other probe. Therefore, the presence and differential expression of the polynucleotide of the present invention in different tissues can be analyzed qualitatively and quantitatively with the probe 1. Example 7 DNA Microarray
基因芯片或基因微矩阵 (DM Microarray )是目前许多国家实验室和大制药 公司都在着手研制和开发的新技术, 它是指将大量的靶基因片段有序地、 高密度 地排列在玻璃、 硅等载体上, 然后用荧光检测和计算机软件进行数据的比较和分 析, 以达到快速、 高效、 高通量地分析生物信息的目的。 本发明的多核苷酸可作 为靶 DNA 用于基因芯片技术用于高通量研究新基因功能; 寻找和筛选组织特异性 新基因特别是肿瘤等疾病相关新基因; 疾病的诊断, 如遗传性疾病。 其具体方法 步骤在文献中已有多种报道, 如可参阅文献 DeRi s i, J. L. , Lyer, V. &Brown, P. 0. (1997) Sc ience278, 680-686.及文献 Hel le, R. A. , Schema, M. , Cha i , A. , Shalom, D., (1997) PNAS 94: 2150-2155.  Gene chip or gene microarray (DM Microarray) is a new technology currently being developed by many national laboratories and large pharmaceutical companies. The data is compared and analyzed on a carrier such as silicon using fluorescence detection and computer software to achieve the purpose of rapid, efficient, and high-throughput analysis of biological information. The polynucleotide of the present invention can be used as target DNA for gene chip technology for high-throughput research of new gene functions; search for and screen new tissue-specific genes, especially new genes related to diseases such as tumors; diagnosis of diseases such as hereditary diseases . The specific method steps have been reported in the literature. For example, refer to the literature DeRi si, JL, Lyer, V. & Brown, P. 0. (1997) Sc ience 278, 680-686. And the literature Hel le, RA, Schema , M., Cha i, A., Shalom, D., (1997) PNAS 94: 2150-2155.
(一) 点样  (A) spotting
各种不同的全长 cDNA共计 4000条多核苷酸序列作为靶 DNA,其中包括本发明 的多核苷酸。 将它们分别通过 PCR 进行扩增, 纯化所得扩增产物后将其浓度调到 500ng/ul左右, 用 Cartes ian 7500点样仪(购自美国 Cartes ian公司)点于玻璃介 质上, 点与点之间的距离为 280 μ ιη。 将点样后的玻片进行水合、 干燥、 置于紫外 交联仪中交联, 洗脱后干燥使 DNA 固定在玻璃片上制备成芯片。 其具体方法步骤 在文献中已有多种报道, 本实施例的点样后处理步骤是:  A total of 4,000 polynucleotide sequences of various full-length cDNAs are used as target DNA, including the polynucleotide of the present invention. They were amplified by PCR respectively. After purification, the concentration of the amplified product was adjusted to about 500 ng / ul, and spotted on a glass medium with a Cartesian 7500 spotter (purchased from Cartesian Company, USA). The distance between them is 280 μm. The spotted slides were hydrated, dried, and cross-linked in a UV cross-linking instrument. After elution, the DNA was fixed on the glass slide to prepare a chip. The specific method steps have been variously reported in the literature. The post-spotting processing steps of this embodiment are:
1. 潮湿环境中水合 4小时;  1. Hydration in a humid environment for 4 hours;
2. 0. 2%SDS洗涤 1分钟;  2. 0.2% SDS was washed for 1 minute;
3. ddH20洗涤两次, 每次 1分钟; 3. Wash twice with ddH 2 0 for 1 minute each time;
4. NaBH4封闭 5分钟; 4. NaBH 4 is blocked for 5 minutes;
5. 95°C水中 2分钟;  5. 95 ° C water for 2 minutes;
6. 0. 2%SDS洗涤 1分钟; 7. ddH20冲洗两次; 6. 0.2% SDS was washed for 1 minute; 7. Rinse twice with ddH 2 0;
8. 凉干, 25DC储存于暗处备用。 8. The air dried, 25 D C stored in the dark standby.
(二)探针标记  (Two) probe marking
用一步法分别从人体混合组织与机体特定组织 (或经过刺激的细胞株) 中抽 提总 mRNA, 并用 Ol igotex mRNA Midi Ki t (购自 QiaGen公司)纯化 mRNA,通过反转 录分另 1]将焚光试剂 Cy 3dUTP (5-Amino-propargy 1-2' -deoxyur idine 5' - tr iphate coupled to Cy3 f luorescent dye , 购自 Amersham Phamacia Biotech 公司)标记 人体混合组织的 mRNA, 用荧光试剂 Cy5dUTP (5- Amino- propargyl- 2' - deoxyur idine 5' -tr iphate coupled to Cy5 f luorescent dye , 购自 Amersham Phamac ia Biotech 公司)标记机体特定组织 (或经过刺激的细胞株) mRNA, 经纯化后制备出探针。 具 体步骤参照及方法见:  The total mRNA was extracted from the human mixed tissue and specific tissues (or stimulated cell lines) of the body in one step, and the mRNA was purified using Ol igotex mRNA Midi Kit (purchased from QiaGen). The fluorescent reagent Cy 3dUTP (5-Amino-propargy 1-2 '-deoxyur idine 5'-tr iphate coupled to Cy3 f luorescent dye, purchased from Amersham Phamacia Biotech) was used to label mRNA of human mixed tissue, and the fluorescent reagent Cy5dUTP ( 5- Amino- propargyl- 2 '-deoxyur idine 5' -tr iphate coupled to Cy5 f luorescent dye (purchased from Amersham Phamac ia Biotech) to label the mRNA of specific tissues (or stimulated cell lines) of the body and prepare them after purification Probe. For specific steps and methods, see:
Schena, M. , Sha lon, D. , Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M. , Sha lon, Dari. , Davi s, R. W. (1995) Science. 270. (20): 467-480. Schena, M., Sha lon, D., Hel ler, R. (1996) Proc. Nat l. Acad. Sci. USA. Vol. 93: 10614- 10619. Schena, M., Sha lon, Dari., Davi s, RW (1995) Science. 270. (20): 467-480.
(三) 杂交 (Three) cross
分别将来自 以上两种组织的探针与芯片一起在 UniHyb™ Hybr idizat ion Combine the probes from the two tissues with the chips at UniHyb ™ Hybr idizat ion
Solut ion (购自 TeleChem公司)杂交液中进行杂交 16 小时, 室温用洗涤液 ( 1 χ SSC, 0. 2%SDS ) 洗涤后用 ScanArray 3000扫描仪(购自美国 General Scanning公 司)进行扫描, 扫描的图象用 Imagene软件 (美国 Biodi scovery公司 )进行数据 分析处理, 算出每个点的 Cy3/Cy5比值。 Solut ion (purchased from TeleChem) was used for hybridization for 16 hours, and then washed with a washing solution (1 x SSC, 0.2% SDS) at room temperature, and then scanned with a ScanArray 3000 scanner (purchased from General Scanning, USA). The image was processed by Imagene software (Biodi scovery Company, USA) to calculate the Cy3 / Cy5 ratio of each point.
以上机体特定组织 (或经过刺激的细胞株) 分别为胸腺、 睾丸、 肌肉、 脾脏、 肺、 皮肤、 甲状腺、 肝、 PMA+的 Ecv304细胞株、 PMA -的 Ecv304细胞株、 未饥饿的 L02 细胞株、 砷刺激 1小时的 L02细胞株以及前列腺组织。 根据这 13个 Cy3/Cy5比值绘出 折方图。 (图 1 ) 。 由图可见本发明所述的人过氧化物酶体装配因子 -10和人过氧化 物酶体装配因子- 1表达谱很相似。 工业实用性  The above specific tissues (or stimulated cell lines) are thymus, testis, muscle, spleen, lung, skin, thyroid, liver, PMA + Ecv304 cell line, PMA-Ecv304 cell line, non-starved L02 cell line, Arsenic stimulated the L02 cell line and prostate tissue for 1 hour. Based on these 13 Cy3 / Cy5 ratios, a bar graph is drawn. (figure 1 ) . It can be seen from the figure that the expression profile of human peroxisome assembly factor-10 and human peroxisome assembly factor-1 according to the present invention are very similar. Industrial applicability
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗恶性肿 '瘤、 肾上腺缺乏症、 皮肤病、 各类炎症、 HIV 感染和免疫 性疾病等。  The polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat malignant tumors, adrenal deficiency, skin diseases, various inflammations, HIV infections and immune diseases, etc. .
过氧化物酶体是由单层膜包围的内含一种或几种氧化酶类的细胞器。 动物 细胞中过氧化物酶体在肝细胞或肾细胞中, 它可氧化分解血液中的有毒成分, 起到解毒作用, 例如分解酒精。 过氧化物酶体也可以分解脂肪酸等高能分子向 细胞直接提供热能, 并对于糖原异生有作用。 过氧化物酶体装配因子- 1 ( PAF- 1 ) 是一种过氧化物酶体的膜整合蛋白, 在参与过氧化物酶体的装配过程中起 着重要作用。 Peroxisomes are organelles containing one or more oxidases surrounded by a single membrane. Peroxisomes in animal cells are in liver cells or kidney cells, which can oxidize and break down toxic components in the blood, and play a detoxifying role, such as breaking down alcohol. Peroxisomes can also break down high-energy molecules such as fatty acids. Cells provide heat directly and have an effect on glycogenogenesis. Peroxisome assembly factor-1 (PAF-1) is a membrane integrin of peroxisome, which plays an important role in the assembly process of peroxisome.
研究发现。 过氧化物酶体装配因子- 1 ( PAF-1 ) 缺失或者发生变异会影响过 氧化物酶体装配, 而一旦缺少这种正常的含过氧化氢酶的颗粒, 便会导致多种 代谢紊乱, 例如过氧化物酶的 β -氧化及缩醛磷脂生物合成缺陷, 从而引发各 种疾病, 例如 Zel lweger 综合征, 新生儿肾上腺脑白质营养不良, 婴幼儿多神 经炎性遗传性运动失调以及六氢吡啶羧酸过多酸血症这些基因需要过氧化物酶 体装配的遗传疾病。  The study found. The absence or mutation of the peroxisome assembly factor-1 (PAF-1) will affect the peroxisome assembly, and the absence of such normal catalase-containing particles will lead to a variety of metabolic disorders, For example, β-oxidation of peroxidase and defects in plasmalogen biosynthesis, which cause various diseases, such as Zel lweger syndrome, neonatal adrenal white matter malnutrition, polyneuritis hereditary dyskinesia in infants and young children, and hexahydrogen These genes are genetic disorders that require peroxisome assembly.
本发明的多肽的表达谱与人过氧化物酶体装配因子- 1 的表达谱相一致, 两 者具有相似的生物学功能。 它在体内参与脂质代谢、 糖原异生, 并对于机体解 毒很重要。 其表达异常通常与一些相关的物质代谢紊乱性疾病如 Ze l lweger 综 合征、 新生儿肾上腺脑白质营养不良、 婴幼儿多神经炎性遗传性运动失调、 六 氢吡啶羧酸过多酸血症, 以及相关组织的肿瘤的发生密切相关, 并产生相关的 疾病。  The expression profile of the polypeptide of the present invention is consistent with the expression profile of human peroxisome assembly factor-1, and the two have similar biological functions. It is involved in lipid metabolism, glycogenogenesis in the body, and is important for detoxification of the body. Its abnormal expression is usually related to some metabolic disorders such as Ze l lweger syndrome, neonatal adrenal white matter dystrophy, polyneuritis hereditary ataxia in infants and young children, hexahydropyridinecarboxylic acid hyperacidemia, And the occurrence of tumors in related tissues is closely related and produces related diseases.
由此可见, 本发明的人过氧化物酶体装配因子 -10 的表达异常将产生各种 疾病尤其是 Zel lweger 综合征、 新生儿肾上腺脑白质营养不良、 婴幼儿多神经 炎性遗传性运动失调、 六氢吡啶羧酸过多酸血症、 其它胚胎发育紊乱症、 生长 发育障碍性疾病、 物质代谢紊乱症、 各种肿瘤、 炎症、 免疫性疾病, 这些疾病 包括但不限于:  It can be seen that the abnormal expression of human peroxisome assembly factor-10 of the present invention will produce various diseases, especially Zel lweger syndrome, neonatal adrenal white matter dystrophy, and polyneuropathy in infants and young children. , Hexahydropyridinecarboxylic acid hyperacidemia, other embryonic developmental disorders, disorders of growth and development, disorders of material metabolism, various tumors, inflammation, immune diseases, these diseases include but are not limited to:
胚胎发育紊乱症: 先天性流产, 腭裂, 肢体缺如, 肢体分化障碍, 透明膜 病, 肺膨胀不全, 多囊肾, 隐睾, 先天性腹股沟疝, 双子宫, 阴道闭锁, 尿道 下裂, 两性畸形, 房间隔缺损, 室间隔缺损, 肺动脉狭窄, 动脉导管未闭, 神 经管缺陷, 先天性脑积水, 虹膜缺损, 先天性青光眼或白内障, 先天性耳聋 生长发育障碍性疾病: 精神发育迟缓, 脑发育障碍, 皮肤、 脂肪和肌肉发 育不良性疾病, 骨与关节发育不良性疾病, 各种代谢缺陷病, 呆小症, 侏儒症, 库兴综合这征, 性发育迟缓症  Fetal developmental disorders: congenital abortion, cleft palate, limb loss, limb differentiation disorder, hyaline membrane disease, atelectasis, polycystic kidney, cryptorchidism, congenital inguinal hernia, double uterus, vaginal atresia, hypospadias, androgynous Malformation, Atrial septal defect, Ventricular septal defect, Pulmonary stenosis, Arterial duct occlusion, Neural tube defect, Congenital hydrocephalus, Iris defect, Congenital glaucoma or cataract, Congenital deafness Growth and development disorders: Mental retardation, Brain development disorders, skin, fat and muscular dysplasia, bone and joint dysplasia, various metabolic defects, stunting, dwarfism, Cushing syndrome, sexual retardation
物质代谢紊乱症: 异戊酸血症, 丙酸血症, 甲基丙二酸尿症, 联合羧化酶 缺陷, 戊二酸血症 I型, 苯丙酮尿症, 白化病, 半乳糖血症, 果糖代谢缺陷, 糖原贮积症  Material metabolism disorders: isovalerate, propionate, methylmalonic aciduria, combined carboxylase deficiency, glutarate type I, phenylketonuria, albinism, galactosemia, Defective fructose metabolism, glycogen storage disease
各种组织的肿瘤: 胃癌, 肝癌, 肺癌, 食管癌, 乳腺癌, 白血病, 淋巴瘤, 甲状腺肿瘤, 子宫肌瘤, 神经细胞瘤, 星形细胞瘤, 室管膜瘤, 胶质细胞瘤, 神经纤维瘤, 结肠癌, 黑色素瘤, 膀胱癌, 子宫癌, 子宫内膜癌, 结肠癌, 胸 腺肿瘤, 鼻咽癌, 喉癌, 气管肿瘤, 纤维瘤, 纤维肉瘤, 脂肪瘤, 脂肪肉瘤 炎症: 慢性活动性肝炎, 结节病, 多肌炎, 慢性鼻炎, 慢性胃炎, 脑脊髓 多发性硬化, 肾小球性肾炎, 心肌炎, 心肌病, 动脉粥样硬化, 胃溃疡, 子宫 颈炎, 各种感染性炎症 Tumors of various tissues: gastric cancer, liver cancer, lung cancer, esophageal cancer, breast cancer, leukemia, lymphoma, thyroid tumor, uterine fibroids, neuroblastoma, astrocytoma, ependymoma, glioblastoma, Neurofibromas, colon cancer, melanoma, bladder cancer, uterine cancer, endometrial cancer, colon cancer, thymic tumor, nasopharyngeal cancer, laryngeal cancer, tracheal tumor, fibroma, fibrosarcoma, lipoma, liposarcoma inflammation: Chronic active hepatitis, sarcoidosis, polymyositis, chronic rhinitis, chronic gastritis, cerebrospinal multiple sclerosis, glomerulonephritis, myocarditis, cardiomyopathy, atherosclerosis, gastric ulcer, cervicitis, various Infectious inflammation
免疫性疾病: 系统性红斑狼疮, 类风湿性关节炎, 支气管哮喘, 荨麻疹, 特异性皮炎, 感染后心肌炎, 硬皮病, 重症肌无力, 格林-巴利综合症, 普通 易变免疫缺陷病, 原发性 B淋巴细胞免疫缺陷病, 获得性免疫缺陷综合症  Immune diseases: Systemic lupus erythematosus, rheumatoid arthritis, bronchial asthma, urticaria, specific dermatitis, post-infection myocarditis, scleroderma, myasthenia gravis, Guillain-Barre syndrome, common variable immunodeficiency disease , Primary B-lymphocyte immunodeficiency disease, Acquired immunodeficiency syndrome
本发明的多肽以及该多肽的拮抗剂、 激动剂和抑制剂可直接用于疾病治疗, 例如, 可治疗各种疾病尤其是 Zel lweger 综合征、 新生儿肾上腺脑白质营养不 良、 婴幼儿多神经炎性遗传性运动失调、 六氢吡啶羧酸过多酸血症、 其它胚胎 发育紊乱症、 生长发育障碍性疾病、 物质代谢紊乱症、 各种肿瘤、 炎症、 免疫 性疾病等。 本发明也提供了筛选化合物以鉴定提高(激动剂)或阻遏(拮抗剂)人过氧化 物酶体装配因子- 10 的药剂的方法。 激动剂提高人过氧化物酶体装配因子- 10刺 激细胞增殖等生物功能, 而拮抗剂阻止和治疗与细胞过度增殖有关的紊乱如各 种癌症。 例如, 能在药物的存在下, 将哺乳动物细胞或表达人过氧化物酶体装 配因子 -10的膜制剂与标记的人过氧化物酶体装配因子 -10 —起培养。 然后测定 药物提高或阻遏此相互作用的能力。  The polypeptide of the present invention and the antagonists, agonists and inhibitors of the polypeptide can be directly used in the treatment of diseases, for example, it can treat various diseases, especially Zel lweger syndrome, neonatal adrenal white matter malnutrition, and polyneuritis in infants and young children. Sexual hereditary dyskinesias, hexahydropyridinecarboxylic acid hyperacidemia, other embryonic developmental disorders, growth disorders, substance metabolism disorders, various tumors, inflammation, immune diseases, etc. The invention also provides methods for screening compounds to identify agents that increase (agonist) or suppress (antagonist) human peroxisome assembly factor-10. Agonists enhance human peroxisome assembly factor-10 to stimulate biological functions such as cell proliferation, while antagonists prevent and treat disorders related to cell proliferation, such as various cancers. For example, mammalian cells or membrane preparations expressing human peroxisome assembly factor -10 can be cultured together with labeled human peroxisome assembly factor -10 in the presence of drugs. The ability of the drug to increase or block this interaction is then determined.
人过氧化物酶体装配因子 -10 的拮抗剂包括筛选出的抗体、 化合物、 受体 缺失物和类似物等。 人过氧化物酶体装配因子- 10 的拮抗剂可以与人过氧化物 酶体装配因子 -10 结合并消除其功能, 或是抑制该多肽的产生, 或是与该多肽 的活性位点结合使该多肽不能发挥生物学功能。  Antagonists of human peroxisome assembly factor-10 include antibodies, compounds, receptor deletions, and the like that have been screened. Antagonists of human peroxisome assembly factor-10 can bind to human peroxisome assembly factor-10 and eliminate its function, or inhibit the production of the polypeptide, or bind to the active site of the polypeptide so that The polypeptide cannot perform biological functions.
在筛选作为拮抗剂的化合物时, 可以将人过氧化物酶体装配因子- 10 加入 生物分析测定中, 通过测定化合物对人过氧化物酶体装配因子- 10 和其受体之 间相互作用的影响来确定化合物是否是拮抗剂。 用上述筛选化合物的同样方法, 可以筛选出起拮抗剂作用的受体缺失物和类似物。 能与人过氧化物酶体装配因 子- 10 结合的多肽分子可通过筛选由各种可能组合的氨基酸结合于固相物组成 的随机多肽库而获得。 筛选时, 一般应对人过氧化物酶体装配因子 -10 分子进 行标记。  When screening compounds as antagonists, human peroxisome assembly factor-10 can be added to bioanalytical assays by determining the compound's effect on the interaction between human peroxisome assembly factor-10 and its receptors. Influence to determine if a compound is an antagonist. Receptor deletions and analogs that act as antagonists can be screened in the same manner as described above for screening compounds. Polypeptide molecules capable of binding to human peroxisome assembly factor-10 can be obtained by screening a random peptide library composed of various possible combinations of amino acids bound to a solid phase. In screening, the human peroxisome assembly factor-10 molecule should generally be labeled.
本发明提供了用多肽, 及其片段、 衍生物、 类似物或它们的细胞作为抗原 以生产抗体的方法。 这些抗体可以是多克隆抗体或单克隆抗体。 本发明还提供 了针对人过氧化物酶体装配因子- 1 0 抗原决定簇的抗体。 这些抗体包括(但不限 于): 多克隆抗体、 单克隆抗体、 嵌合抗体、 单链抗体、 Fab 片段和 Fab表达文 库产生的片段。 The present invention provides polypeptides, and fragments, derivatives, analogs or cells thereof as antigens. To produce antibodies. These antibodies can be polyclonal or monoclonal antibodies. The invention also provides antibodies against the human peroxisome assembly factor-10 epitope. These antibodies include (but are not limited to): polyclonal antibodies, monoclonal antibodies, chimeric antibodies, single chain antibodies, Fab fragments, and fragments produced by Fab expression libraries.
多克隆抗体的生产可用人过氧化物酶体装配因子 -1 0直接注射免疫动物(如 家兔, 小鼠, 大鼠等) 的方法得到, 多种佐剂可用于增强免疫反应, 包括但不 限于弗氏佐剂等。 制备人过氧化物酶体装配因子 -10 的单克隆抗体的技术包括 但不限于杂交瘤技术(Kohler and Mi l s te in. Na ture, 1975, 256: 495-497) , 三 瘤技术, 人 Β-细胞杂交瘤技术, EBV-杂交瘤技术等。 将人恒定区和非人源的可 变 区 结 合 的 嵌 合 抗 体 可 用 已 有 的 技 术 生 产 (Morr i son et a l , PNAS, 1985, 81: 6851)„ 而已有的生产单链抗体的技术(U. S. Pa t No. 4946778) 也可用于生产抗人过氧化物酶体装配因子 -10的单链抗体。  Polyclonal antibodies can be produced by injecting human peroxisome assembly factor-10 directly into immunized animals (such as rabbits, mice, rats, etc.). A variety of adjuvants can be used to enhance the immune response, including but not Limited to Freund's adjuvant and the like. Techniques for preparing monoclonal antibodies to human peroxisome assembly factor-10 include, but are not limited to, hybridoma technology (Kohler and Miles in. Nature, 1975, 256: 495-497), triple tumor technology, human beta -Cell hybridoma technology, EBV-hybridoma technology, etc. Chimeric antibodies that combine human constant regions with non-human variable regions can be produced using existing techniques (Morrison et al, PNAS, 1985, 81: 6851) and existing techniques for producing single-chain antibodies (US Pa t No. 4946778) can also be used to produce single chain antibodies against human peroxisome assembly factor-10.
抗人过氧化物酶体装配因子 -1 0 的抗体可用于免疫组织化学技术中, 检测 活检标本中的人过氧化物酶体装配因子- 1 0。  Antibodies against human peroxisome assembly factor -10 can be used in immunohistochemistry to detect human peroxisome assembly factor-10 in biopsy specimens.
与人过氧化物酶体装配因子 -1 0 结合的单克隆抗体也可用放射性同位素标 记, 注入体内可跟踪其位置和分布。 这种放射性标记的抗体可作为一种非创伤 性诊断方法用于肿瘤细胞的定位和判断是否有转移。  Monoclonal antibodies that bind to human peroxisome assembly factor-10 can also be labeled with radioisotopes and injected into the body to track their location and distribution. This radiolabeled antibody can be used as a non-invasive diagnostic method to locate tumor cells and determine whether there is metastasis.
抗体还可用于设计针对体内某一特殊部位的免疫毒素。 如人过氧化物酶体 装配因子 -10 高亲和性的单克隆抗体可与细菌或植物毒素(如白喉毒素, 蓖麻蛋 白, 红豆碱等)共价结合。 一种通常的方法是用巯基交联剂如 SPDP , 攻击抗体 的氨基, 通过二硫键的交换, 将毒素结合于抗体上, 这种杂交抗体可用于杀灭 人过氧化物酶体装配因子- 10阳性的细胞。  Antibodies can also be used to design immunotoxins that target a particular part of the body. For example, human peroxisome assembly factor-10 high affinity monoclonal antibodies can covalently bind to bacterial or plant toxins (such as diphtheria toxin, ricin, ormosine, etc.). A common method is to attack the amino group of an antibody with a thiol cross-linking agent such as SPDP and bind the toxin to the antibody through the exchange of disulfide bonds. This hybrid antibody can be used to kill the human peroxisome assembly factor- 10 positive cells.
本发明中的抗体可用于治疗或预防与人过氧化物酶体装配因子 -10 相关的 疾病。 给予适当剂量的抗体可以刺激或阻断人过氧化物酶体装配因子 -1 0 的产 生或活性。  The antibodies of the present invention can be used to treat or prevent diseases related to human peroxisome assembly factor-10. Administration of an appropriate dose of antibody can stimulate or block the production or activity of human peroxisome assembly factor-10.
本发明还涉及定量和定位检测人过氧化物酶体装配因子 -10 水平的诊断试 验方法。 这些试验是本领域所熟知的, 且包括 FISH测定和放射免疫测定。 试验 中所检测的人过氧化物酶体装配因子- 10 水平, 可以用作解释人过氧化物酶体 装配因子- 10在各种疾病中的重要性和用于诊断人过氧化物酶体装配因子 -1 0起 作用的疾病。  The invention also relates to a diagnostic test method for quantitative and localized detection of human peroxisome assembly factor-10 levels. These tests are well known in the art and include FISH assays and radioimmunoassays. The level of human peroxisome assembly factor-10 detected in the test can be used to explain the importance of human peroxisome assembly factor-10 in various diseases and to diagnose human peroxisome assembly Factor-10 disease.
本发明的多肽还可用作肽谱分析, 例如, 多肽可用物理的、 化学或酶进行 特异性切割, 并进行一维或二维或三维的凝胶电泳分析,更好的是进行质谱分 析。 The polypeptide of the present invention can also be used for peptide mapping analysis. For example, the polypeptide can be specifically cleaved by physical, chemical or enzymatic analysis, and subjected to one-dimensional or two-dimensional or three-dimensional gel electrophoresis analysis, and more preferably mass spectrometry analysis. Analysis.
编码人过氧化物酶体装配因子- 10 的多核苷酸也可用于多种治疗目的。 基 因治疗技术可用于治疗由于人过氧化物酶体装配因子 -10 的无表达或异常 /无活 性表达所致的细胞增殖、 发育或代谢异常。 重组的基因治疗载体(如病毒载体) 可设计用于表达变异的人过氧化物酶体装配因子 -10 , 以抑制内源性的人过氧化 物酶体装配因子 -10活性。 例如, 一种变异的人过氧化物酶体装配因子 -1 0可以 是缩短的、 缺失了信号传导功能域的人过氧化物酶体装配因子- 10, 虽可与下游 的底物结合, 但缺乏信号传导活性。 因此重组的基因治疗载体可用于治疗人过 氧化物酶体装配因子 -10 表达或活性异常所致的疾病。 来源于病毒的表达载体 如逆转录病毒、 腺病毒、 腺病毒相关病毒、 单纯疱疹病毒、 细小病毒等可用于 将编码人过氧化物酶体装配因子 -10 的多核苷酸转移至细胞内。 构建携带编码 人过氧化物酶体装配因子 -10 的多核苷酸的重组病毒载体的方法可见于巳有文 献(Sambrook, et a l. )。 另外重组编码人过氧化物酶体装配因子- 1 0 的多核苷酸 可包装到脂质体中转移至细胞内。  The polynucleotide encoding human peroxisome assembly factor-10 can also be used for a variety of therapeutic purposes. Gene therapy technology can be used to treat abnormal cell proliferation, development, or metabolism caused by the non-expression or abnormal / inactive expression of human peroxisome assembly factor-10. Recombinant gene therapy vectors (such as viral vectors) can be designed to express mutated human peroxisome assembly factor -10 to inhibit endogenous human peroxisome assembly factor -10 activity. For example, a mutated human peroxisome assembly factor-10 may be a shortened human peroxisome assembly factor-10 that lacks a signaling domain, although it can bind to downstream substrates, but Lack of signaling activity. Therefore, the recombinant gene therapy vector can be used for treating diseases caused by abnormal expression or activity of human peroxisome assembly factor-10. Virus-derived expression vectors such as retrovirus, adenovirus, adenovirus-associated virus, herpes simplex virus, parvovirus, etc. can be used to transfer a polynucleotide encoding human peroxisome assembly factor-10 into cells. Methods for constructing recombinant viral vectors carrying a polynucleotide encoding human peroxisome assembly factor-10 can be found in the literature (Sambrook, et al.). In addition, a recombinant polynucleotide encoding human peroxisome assembly factor-10 can be packaged into liposomes and transferred into cells.
多核苷酸导入组织或细胞内的方法包括: 将多核苷酸直接注入到体内组织 中; 或在体外通过载体(如病毒、 噬菌体或质粒等)先将多核苷酸导入细胞中, 再将细胞移植到体内等。  Methods for introducing a polynucleotide into a tissue or cell include: directly injecting the polynucleotide into a tissue in vivo; or introducing the polynucleotide into a cell in vitro through a vector (such as a virus, phage, or plasmid), and then transplanting the cell Into the body and so on.
抑制人过氧化物酶体装配因子 -10 mRNA 的寡核苷酸(包括反义 RM和 DNA) 以及核酶也在本发明的范围之内。 核酶是一种能特异性分解特定 MA的酶样 RNA 分子, 其作用机制是核酶分子与互补的靶 RM特异性杂交后进行核酸内切作用。 反义的 RNA和 DNA及核酶可用已有的任何 RNA或 DNA合成技术获得, 如固相磷 酸酰胺化学合成法合成寡核苷酸的技术已广泛应用。 反义 RNA 分子可通过编码 该 RNA 的 DNA序列在体外或体内转录获得。 这种 DNA序列已整合到载体的 RNA 聚合酶启动子的下游。 为了增加核酸分子的稳定性, 可用多种方法对其进行修 饰, 如增加两侧的序列长度, 核糖核苷之间的连接应用磷酸硫酯键或肽键而非 磷酸二酯键。  Oligonucleotides (including antisense RM and DNA) and ribozymes that inhibit human peroxisome assembly factor-10 mRNA are also within the scope of the present invention. A ribozyme is an enzyme-like RNA molecule that specifically decomposes a specific MA. Its mechanism of action is that the ribozyme molecule specifically hybridizes with a complementary target RM to perform endonucleation. Antisense RNA, DNA, and ribozymes can be obtained using any existing RNA or DNA synthesis technology, such as solid-phase phosphoramidite chemical synthesis to synthesize oligonucleotides. Antisense RNA molecules can be obtained by in vitro or in vivo transcription of a DNA sequence encoding the RNA. This DNA sequence has been integrated downstream of the vector's RNA polymerase promoter. In order to increase the stability of the nucleic acid molecule, it can be modified in a variety of ways, such as increasing the sequence length on both sides, and the linkage between ribonucleosides using phosphate thioester or peptide bonds instead of phosphodiester bonds.
编码人过氧化物酶体装配因子- 10 的多核苷酸可用于与人过氧化物酶体装 配因子 -10的相关疾病的诊断。 编码人过氧化物酶体装配因子- 10的多核苷酸可 用于检测人过氧化物酶体装配因子 -10 的表达与否或在疾病状态下人过氧化物 酶体装配因子 -1 0的异常表达。 如编码人过氧化物酶体装配因子- 10的 DM序列 可用于对活检标本进行杂交以判断人过氧化物酶体装配因子 -10 的表达状况。 杂交技术包括 Southern印迹法, Nor thern印迹法、 原位杂交等。 这些技术方法 都是公开的成熟技术, 相关的试剂盒都可从商业途径得到。 本发明的多核苷酸 的一部分或全部可作为探针固定在微阵列(Microarray)或 DNA芯片(又称为 "基 因芯片" )上, 用于分析组织中基因的差异表达分析和基因诊断。 用人过氧化物 酶体装配因子 -10 特异的引物进行 RNA-聚合酶链反应(RT- PCR)体外扩增也可检 测人过氧化物酶体装配因子 -10的转录产物。 The polynucleotide encoding human peroxisome assembly factor-10 can be used for the diagnosis of diseases related to human peroxisome assembly factor-10. The polynucleotide encoding human peroxisome assembly factor-10 can be used to detect the expression of human peroxisome assembly factor-10 or the abnormality of human peroxisome assembly factor-10 in a disease state. expression. For example, the DM sequence encoding human peroxisome assembly factor-10 can be used to hybridize biopsy specimens to determine the expression of human peroxisome assembly factor-10. Hybridization techniques include Southern blotting, Nor thern blotting, in situ hybridization, and the like. These technical methods Both are publicly available mature technologies and related kits are commercially available. Some or all of the polynucleotides of the present invention can be used as probes to be fixed on a microarray or a DNA chip (also referred to as a "gene chip") for analyzing differential expression analysis and gene diagnosis of genes in tissues. Human peroxisome assembly factor-10 specific primers for RNA-polymerase chain reaction (RT-PCR) in vitro amplification can also detect human peroxisome assembly factor-10 transcription products.
检测人过氧化物酶体装配因子- 10 基因的突变也可用于诊断人过氧化物酶 体装配因子- 10相关的疾病。 人过氧化物酶体装配因子 -10突变的形式包括与正 常野生型人过氧化物酶体装配因子 -10 DNA 序列相比的点突变、 易位、 缺失、 重组和其它任何异常等。可用已有的技术如 Southern印迹法、 DNA序列分析、 PCR 和原位杂交检测突变。 另外, 突变有可能影响蛋白的表达, 因此用 Northern 印 迹法、 Wes tern印迹法可间接判断基因有无突变。  Detection of mutations in the human peroxisome assembly factor-10 gene can also be used to diagnose human peroxisome assembly factor-10-related diseases. Human peroxisome assembly factor-10 mutations include point mutations, translocations, deletions, recombinations, and any other abnormalities compared to the normal wild-type human peroxisome assembly factor-10 DNA sequence. Mutations can be detected using existing techniques such as Southern blotting, DNA sequence analysis, PCR and in situ hybridization. In addition, mutations may affect protein expression. Therefore, Northern blotting and Western blotting can be used to indirectly determine whether a gene is mutated.
本发明的序列对染色体鉴定也是有价值的。 该序列会特异性地针对某条人 染色体具体位置且并可以与其杂交。 目前, 需要鉴定染色体上的各基因的具体 位点。 现在, 只有很少的基于实际序列数据(重复多态性)的染色体标记物可用 于标记染色体位置。 根据本发明, 为了将这些序列与疾病相关基因相关联, 其 重要的第一步就是将这些 DNA序列定位于染色体上。  The sequences of the invention are also valuable for chromosome identification. The sequence specifically targets a specific position on a human chromosome and can hybridize to it. Currently, specific sites for each gene on the chromosome need to be identified. Currently, only a few chromosome markers based on actual sequence data (repeating polymorphisms) are available for marking chromosome positions. According to the present invention, in order to associate these sequences with disease-related genes, an important first step is to locate these DNA sequences on a chromosome.
简而言之, 根据 cDNA制备 PCR引物(优选 15- 35bp) , 可以将序列定位于染色 体上。 然后, 将这些引物用于 PCR筛选含各条人染色体的体细胞杂合细胞。 只 有那些含有相应于引物的人基因的杂合细胞会产生扩增的片段。  In short, PCR primers (preferably 15-35bp) are prepared based on cDNA, and the sequences can be located on chromosomes. These primers were then used for PCR screening of somatic hybrid cells containing individual human chromosomes. Only those heterozygous cells containing the human gene corresponding to the primer will produce amplified fragments.
体细胞杂合细胞的 PCR定位法, 是将 DNA定位到具体染色体的快捷方法。 使 用本发明的寡核苷酸引物, 通过类似方法, 可利用一组来自特定染色体的片段 或大量基因组克隆而实现亚定位。 可用于染色体定位的其它类似策略包括原位 杂交、 用标记的流式分选的染色体预筛选和杂交预选, 从而构建染色体特异的 cDNA库。  PCR localization of somatic hybrid cells is a quick way to localize DNA to specific chromosomes. Using the oligonucleotide primers of the present invention, in a similar manner, a set of fragments from a specific chromosome or a large number of genomic clones can be used to achieve sublocalization. Other similar strategies that can be used for chromosomal localization include in situ hybridization, chromosome pre-screening with labeled flow sorting, and pre-selection of hybridization to construct chromosome-specific cDNA libraries.
将 cDNA克隆与中期染色体进行荧光原位杂交(FISH) , 可以在一个步骤中精 确地进行染色体定位。 此技术的综述, 参见 Verma等, Human Chromosomes: a Manua l of Bas ic Techniques, Pergamon Pres s, New York (1988)。  Fluorescent in situ hybridization (FISH) of cDNA clones with metaphase chromosomes allows precise chromosomal localization in one step. For a review of this technique, see Verma et al., Human Chromosomes: a Manua l of Basic Techniques, Pergamon Pres s, New York (1988).
一旦序列被定位到准确的染色体位置, 此序列在染色体上的物理位置就可 以与基因图数据相关联。 这些数据可见于例如, V. Mckus ick, Mendel iaii Inher i tance in Man (可通过与 Johns Hopkins Univers i ty Welch Medica l Library联机获得)。 然后可通过连锁分析, 确定基因与业巳定位到染色体区域 上的疾病之间的关系。 接着, 需要测定患病和未患病个体间的 cDM或基因组序列差异。 如果在一 些或所有的患病个体中观察到某突变, 而该突变在任何正常个体中未观察到, 则该突变可能是疾病的病因。 比较患病和未患病个体, 通常涉及首先寻找染色 体中结构的变化, 如从染色体水平可见的或用基于 cDNA序列的 PCR可检测的缺 失或易位。 根据目前的物理作图和基因定位技术的分辨能力, 被精确定位至与 疾病有关的染色体区域的 cDNA , 可以是 50至 5 00个潜在致病基因间之一种(假定 1兆碱基作图分辨能力和每 20kb对应于一个基因)。 Once the sequence is located at the exact chromosomal location, the physical location of the sequence on the chromosome can be correlated with the genetic map data. These data can be found in, for example, V. Mckusick, Mendeliaia Inheritance in Man (available online with Johns Hopkins University Wetch Medical Library). Linkage analysis can then be used to determine the relationship between genes and diseases that are mapped to chromosomal regions. Next, the CDM or genomic sequence differences between the affected and unaffected individuals need to be determined. If a mutation is observed in some or all diseased individuals and the mutation is not observed in any normal individuals, the mutation may be the cause of the disease. Comparing affected and unaffected individuals usually involves first looking for structural changes in the chromosome, such as deletions or translocations that are visible at the chromosomal level or detectable using cDNA sequence-based PCR. According to the resolution capabilities of current physical mapping and gene mapping technology, the cDNA accurately mapped to the disease-related chromosomal region can be one of 50 to 500 potentially pathogenic genes (assuming 1 megabase mapping) Resolving power and each 20kb corresponds to a gene).
可以将本发明的多肽、 多核苷酸及其模拟物、 激动剂、 拮抗剂和抑制剂与 合适的药物载体组合后使用。 这些载体可以是水、 葡萄糖、 乙醇、 盐类、 缓冲 液、 甘油以及它们的组合。 组合物包含安全有效量的多肽或拮抗剂以及不影响 药物效果的载体和赋形剂。 这些组合物可以作为药物用于疾病治疗。  The polypeptides, polynucleotides and mimetics, agonists, antagonists and inhibitors of the present invention can be used in combination with a suitable pharmaceutical carrier. These carriers can be water, glucose, ethanol, salts, buffers, glycerol, and combinations thereof. The composition comprises a safe and effective amount of the polypeptide or antagonist, and carriers and excipients which do not affect the effect of the drug. These compositions can be used as drugs for the treatment of diseases.
本发明还提供含有一种或多种容器的药盒或试剂盒, 容器中装有一种或多 种本发明的药用组合物成分。 与这些容器一起, 可以有由制造、 使用或销售药 品或生物制品的政府管理机构所给出的指示性提示, 该提示反映出生产、 使用 或销售的政府管理机构许可其在人体上施用。 此外, 本发明的多肽可以与其它 的治疗化合物结合使用。  The invention also provides a kit or kit containing one or more containers containing one or more ingredients of the pharmaceutical composition of the invention. Along with these containers, there may be instructional instructions given by government agencies that manufacture, use, or sell pharmaceuticals or biological products, which prompts permission for administration on the human body by government agencies that produce, use, or sell. In addition, the polypeptides of the invention can be used in combination with other therapeutic compounds.
药物组合物可以以方便的方式给药, 如通过局部、 静脉内、 腹膜内、 肌内、 皮下、 鼻内或皮内的给药途径。 人过氧化物酶体装配因子- 1 0 以有效地治疗和 / 或预防具体的适应症的量来给药。 施用于患者的人过氧化物酶体装配因子 -1 0 的量和剂量范围将取决于许多因素, 如给药方式、 待治疗者的健康条件和诊断 医生的判断。  The pharmaceutical composition can be administered in a convenient manner, such as by a topical, intravenous, intraperitoneal, intramuscular, subcutaneous, intranasal or intradermal route of administration. Human peroxisome assembly factor-10 is administered in an amount effective to treat and / or prevent a specific indication. The amount and range of human peroxisome assembly factor-10 to be administered to a patient will depend on many factors, such as the mode of administration, the health conditions of the person to be treated, and the judgment of the diagnostician.

Claims

权 利 要 求 书 Claim
1、 一种分离的多肽-人过氧化物酶体装配因子 -10 , 其特征在于它包含有: SEQ ID NO: 2所示的氨基酸序列的多肽、 或其多肽的活性片段、 类似物或衍生物。 1. An isolated polypeptide-human peroxisome assembly factor-10, characterized in that it comprises: a polypeptide having the amino acid sequence shown in SEQ ID NO: 2, or an active fragment, analog, or derivative thereof Thing.
2、 如权利要求 1 所述的多肽, 其特征在于所述多肽、 类似物或衍生物的氨基 酸序列具有与 SEQ ID NO: 2所示的氨基酸序列至少 95%的相同性。 2. The polypeptide according to claim 1, characterized in that the amino acid sequence of the polypeptide, analog or derivative has at least 95% identity with the amino acid sequence shown in SEQ ID NO: 2.
3、 如权利要求 2所述的多肽, 其特征在于它包含具有 SEQ ID N0: 2所示的氨基 酸序列的多肽。  3. The polypeptide according to claim 2, characterized in that it comprises a polypeptide having the amino acid sequence shown in SEQ ID NO: 2.
4、 一种分离的多核苷酸, 其特征在于所述多核苷酸包含选自下组中的一种: (a) 编码具有 SEQ ID NO: 2 所示氨基酸序列的多肽或其片段、 类似物、 衍生 物的多核苷酸;  4. An isolated polynucleotide, characterized in that said polynucleotide comprises one selected from the group consisting of: (a) encoding a polypeptide having the amino acid sequence shown in SEQ ID NO: 2 or a fragment thereof, or an analog thereof; Polynucleotides of derivatives;
(b) 与多核苷酸 (a ) 互补的多核苷酸; 或  (b) a polynucleotide complementary to polynucleotide (a); or
(c) 与 ) 或 (b ) 有至少 70%相同性的多核苷酸。  (c) a polynucleotide that is at least 70% identical to) or (b).
5、 如权利要求 4 所述的多核苷酸, 其特征在于所述多核苷酸包含编码具有 SEQ ID NO: 2所示氨基酸序列的多核苷酸。 '  5. The polynucleotide according to claim 4, wherein the polynucleotide comprises a polynucleotide encoding an amino acid sequence represented by SEQ ID NO: 2. '
6、如权利要求 4所述的多核苷酸,其特征在于所述多核苷酸的序列包含有 SEQ ID NO: 1 中 119-397位的序列或 SEQ ID NO: 1 中 1-2567位的序列。  6. The polynucleotide according to claim 4, characterized in that the sequence of the polynucleotide comprises the sequence of positions 119-397 in SEQ ID NO: 1 or the sequence of positions 1-2567 in SEQ ID NO: 1 .
7、 一种含有外源多核苷酸的重组载体, 其特征在于它是由权利要求 4 - 6 中的 任一权利要求所述多核苷酸与质粒、 病毒或运载体表达载体构建而成的重组载 体。  7. A recombinant vector containing an exogenous polynucleotide, characterized in that it is a recombinant constructed from the polynucleotide according to any one of claims 4 to 6 and a plasmid, virus or vector expression vector Carrier.
8、 一种含有外源多核苷酸的遗传工程化宿主细胞, 其特征在于它是选自于下 列一种宿主细胞:  8. A genetically engineered host cell containing an exogenous polynucleotide, characterized in that it is selected from one of the following host cells:
(a) 用杈利要求 7所述的重组载体转化或转导的宿主细胞; 或  (a) a host cell transformed or transduced with the recombinant vector of claim 7; or
(b) 用权利要求 4-6 中的任一杈利要求所述多核苷酸转化或转导的宿主细 胞。  (b) a host cell transformed or transduced with the polynucleotide according to any one of claims 4-6.
9、 一种具有人过氧化物酶体装配因子 -10 活性的多肽的制备方法, 其特征在于 所述方法包括:  9. A method for preparing a polypeptide having human peroxisome assembly factor-10 activity, characterized in that the method includes:
(a) 在表达人过氧化物酶体装配因子- 10 条件下, 培养杈利要求 8 所述的工 程化宿主细胞;  (a) culturing the engineered host cell according to claim 8 under conditions that express human peroxisome assembly factor-10;
(b) 从培养物中分离出具有人过氧化物酶体装配因子 -1 0活性的多肽。  (b) isolating a polypeptide having human peroxisome assembly factor-10 activity from the culture.
10、 一种能与多肽结合的抗体,其特征在于所述抗体是能与人过氧化物酶体装 配因子 -1 0特异性结合的抗体。 10. An antibody capable of binding to a polypeptide, characterized in that said antibody is an antibody capable of specifically binding to human peroxisome assembly factor-10.
11、 一类模拟或调节多肽活性或表达的化合物, 其特征在于它们是模拟、 促进、 拮抗或抑制人过氧化物酶体装配因子- 10的活性的化合物。 11. A class of compounds that mimic or regulate the activity or expression of a polypeptide, characterized in that they are compounds that mimic, promote, antagonize or inhibit the activity of human peroxisome assembly factor-10.
12、 如权利要求 11所述的化合物, 其特征在于它是 SEQ ID NO: 1所示的多核苷 酸序列或其片段的反义序列。  12. The compound according to claim 11, characterized in that it is an antisense sequence of a polynucleotide sequence or a fragment thereof as shown in SEQ ID NO: 1.
13、 一种权利要求 11 所述化合物的应用, 其特征在于所述化合物用于调节人 过氧化物酶体装配因子- 10在体内、 体外活性的方法。 13. Use of the compound according to claim 11, characterized in that the compound is used for a method for regulating the activity of human peroxisome assembly factor-10 in vivo and in vitro.
14、 一种检测与杈利要求 1-3 中的任一杈利要求所述多肽相关的疾病或疾病易 感性的方法, 其特征在于其包括检测所述多肽的表达量, 或者检测所述多肽的 活性, 或者检测多核苷酸中引起所述多肽表达量或活性异常的核苷酸变异。  14. A method for detecting a disease or disease susceptibility related to the polypeptide according to any one of claims 1-3, characterized in that it comprises detecting the expression level of the polypeptide, or detecting the polypeptide Or detecting a nucleotide variation in a polynucleotide that causes abnormal expression or activity of the polypeptide.
15、 如权利要求 1-3 中的任一权利要求所述多肽的应用, 其特征在于它应用于 筛选人过氧化物酶体装配因子- 10 的模拟物、 激动剂, 拮抗剂或抑制剂; 或者 用于肽指紋图谱鉴定。 15. Use of a polypeptide according to any one of claims 1-3, characterized in that it is used for screening mimetics, agonists, antagonists or inhibitors of human peroxisome assembly factor-10; Or used for peptide fingerprint identification.
16、 如权利要求 4-6 中的任一权利要求所述的核酸分子的应用, 其特征在于它 作为引物用于核酸扩增反应, 或者作为探针用于杂交反应, 或者用于制造基因 芯片或微阵列。  16. The use of a nucleic acid molecule according to any one of claims 4-6, characterized in that it is used as a primer for a nucleic acid amplification reaction, or as a probe for a hybridization reaction, or for manufacturing a gene chip Or microarray.
17、 如权利要求 1-6 及 11 中的任一杈利要求所述的多肽、 多核苷酸或化合物 的应用, 其特征在于用所述多肽、 多核苷酸或其模拟物、 激动剂、 拮抗剂或抑 制剂以安全有效剂量与药学上可接受的载体组成作为诊断或治疗与人过氧化物 酶体装配因子 -10异常相关的疾病的药物组合物。  17. Use of a polypeptide, polynucleotide or compound as claimed in any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or mimetic, agonist, antagonist The agent or inhibitor is composed of a safe and effective dose with a pharmaceutically acceptable carrier as a pharmaceutical composition for diagnosing or treating a disease associated with abnormalities of human peroxisome assembly factor-10.
18、 权利要求 1-6 及 11 中的任一权利要求所述的多肽、 多核苷酸或化合物的 应用, 其特征在于用所述多肽、 多核苷酸或化合物制备用于治疗如恶性肿瘤, 血液病, HIV感染和免疫性疾病和各类炎症的药物。 18. Use of a polypeptide, polynucleotide or compound according to any one of claims 1-6 and 11, characterized in that said polypeptide, polynucleotide or compound is used for preparing for treating malignant tumors, blood, etc. Disease, HIV infection and immune diseases and drugs of various inflammations.
PCT/CN2001/000333 2000-03-17 2001-03-16 A novel polypeptide-human peroxidosome assembly factor 10 and the polynucleotide encoding said polypeptide WO2001072787A1 (en)

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CN00114981A CN1314370A (en) 2000-03-17 2000-03-17 New polypeptide-human peroxisome assembly factor-10 and polynucleotide for coding such polypeptide
CN00114981.4 2000-03-17

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Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5911984A (en) * 1997-06-11 1999-06-15 Incyte Pharmaceuticals, Inc. Human peroxisomal thioesterase

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5911984A (en) * 1997-06-11 1999-06-15 Incyte Pharmaceuticals, Inc. Human peroxisomal thioesterase

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CN1314370A (en) 2001-09-26

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