WO2001057248A2 - Polynucleotide arrays and their use in sequencing - Google Patents
Polynucleotide arrays and their use in sequencing Download PDFInfo
- Publication number
- WO2001057248A2 WO2001057248A2 PCT/GB2001/000407 GB0100407W WO0157248A2 WO 2001057248 A2 WO2001057248 A2 WO 2001057248A2 GB 0100407 W GB0100407 W GB 0100407W WO 0157248 A2 WO0157248 A2 WO 0157248A2
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- polynucleotide
- array
- molecules
- molecule
- target
- Prior art date
Links
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Classifications
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- B—PERFORMING OPERATIONS; TRANSPORTING
- B82—NANOTECHNOLOGY
- B82Y—SPECIFIC USES OR APPLICATIONS OF NANOSTRUCTURES; MEASUREMENT OR ANALYSIS OF NANOSTRUCTURES; MANUFACTURE OR TREATMENT OF NANOSTRUCTURES
- B82Y30/00—Nanotechnology for materials or surface science, e.g. nanocomposites
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase
- C12Q1/6837—Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00277—Apparatus
- B01J2219/00497—Features relating to the solid phase supports
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00277—Apparatus
- B01J2219/00497—Features relating to the solid phase supports
- B01J2219/00527—Sheets
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00277—Apparatus
- B01J2219/0054—Means for coding or tagging the apparatus or the reagents
- B01J2219/00572—Chemical means
- B01J2219/00576—Chemical means fluorophore
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00583—Features relative to the processes being carried out
- B01J2219/00603—Making arrays on substantially continuous surfaces
- B01J2219/00675—In-situ synthesis on the substrate
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/0068—Means for controlling the apparatus of the process
- B01J2219/00702—Processes involving means for analysing and characterising the products
- B01J2219/00707—Processes involving means for analysing and characterising the products separated from the reactor apparatus
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00718—Type of compounds synthesised
- B01J2219/0072—Organic compounds
- B01J2219/00722—Nucleotides
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
- B01J2219/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
- B01J2219/00274—Sequential or parallel reactions; Apparatus and devices for combinatorial chemistry or for making arrays; Chemical library technology
- B01J2219/00718—Type of compounds synthesised
- B01J2219/0072—Organic compounds
- B01J2219/00729—Peptide nucleic acids [PNA]
Abstract
Description
Claims
Priority Applications (7)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU30384/01A AU3038401A (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
EP01902529A EP1252332A2 (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
CA002398168A CA2398168A1 (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
IL15083601A IL150836A0 (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
JP2001555871A JP2003521693A (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
IS6489A IS6489A (en) | 2000-02-01 | 2002-07-31 | Multicore arrays and their use in sequencing |
HK02109277.3A HK1047771A1 (en) | 2000-02-01 | 2002-12-23 | Polynucleotide arrays and their use in sequencing |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
GB0002310.1 | 2000-02-01 | ||
GBGB0002310.1A GB0002310D0 (en) | 2000-02-01 | 2000-02-01 | Polynucleotide sequencing |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2001057248A2 true WO2001057248A2 (en) | 2001-08-09 |
WO2001057248A3 WO2001057248A3 (en) | 2002-02-14 |
Family
ID=9884765
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/GB2001/000407 WO2001057248A2 (en) | 2000-02-01 | 2001-01-31 | Polynucleotide arrays and their use in sequencing |
Country Status (9)
Country | Link |
---|---|
EP (1) | EP1252332A2 (en) |
JP (1) | JP2003521693A (en) |
AU (1) | AU3038401A (en) |
CA (1) | CA2398168A1 (en) |
GB (1) | GB0002310D0 (en) |
HK (1) | HK1047771A1 (en) |
IL (1) | IL150836A0 (en) |
IS (1) | IS6489A (en) |
WO (1) | WO2001057248A2 (en) |
Cited By (103)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2002061127A2 (en) * | 2001-01-30 | 2002-08-08 | Solexa Ltd. | Arrayed polynucleotides and their use in genome analysis |
WO2002074988A2 (en) * | 2001-03-16 | 2002-09-26 | The Chancellor, Master And Scholars Of The University Of Oxford | Arrays and methods of use |
WO2003016565A2 (en) * | 2001-08-13 | 2003-02-27 | Solexa Ltd | Dna sequence analysis |
WO2004027093A1 (en) * | 2002-09-19 | 2004-04-01 | The Chancellor, Master And Scholars Of The University Of Oxford | Molecular arrays and single molecule detection |
WO2004076692A1 (en) * | 2003-02-26 | 2004-09-10 | Solexa Limited | Dna sequence analysis |
US6818395B1 (en) | 1999-06-28 | 2004-11-16 | California Institute Of Technology | Methods and apparatus for analyzing polynucleotide sequences |
WO2005044836A2 (en) | 2003-11-05 | 2005-05-19 | Genovoxx Gmbh | Macromolecular nucleotide compounds and methods for using the same |
US7033764B2 (en) | 1999-05-19 | 2006-04-25 | Cornell Research Foundation, Inc. | Method for sequencing nucleic acid molecules |
EP1739192A1 (en) * | 2005-07-01 | 2007-01-03 | Agilent Technologies, Inc. | Nucleic acid probes for analysis of small RNAs and other polynucleotides |
US7170050B2 (en) | 2004-09-17 | 2007-01-30 | Pacific Biosciences Of California, Inc. | Apparatus and methods for optical analysis of molecules |
WO2007018601A1 (en) * | 2005-08-02 | 2007-02-15 | Rubicon Genomics, Inc. | Compositions and methods for processing and amplification of dna, including using multiple enzymes in a single reaction |
US7427673B2 (en) | 2001-12-04 | 2008-09-23 | Illumina Cambridge Limited | Labelled nucleotides |
US7541444B2 (en) | 2002-08-23 | 2009-06-02 | Illumina Cambridge Limited | Modified nucleotides |
US7592435B2 (en) | 2005-08-19 | 2009-09-22 | Illumina Cambridge Limited | Modified nucleosides and nucleotides and uses thereof |
WO2009116863A2 (en) | 2008-03-17 | 2009-09-24 | Expressive Research B.V. | Expression-linked gene discovery |
US7645596B2 (en) | 1998-05-01 | 2010-01-12 | Arizona Board Of Regents | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US7666593B2 (en) | 2005-08-26 | 2010-02-23 | Helicos Biosciences Corporation | Single molecule sequencing of captured nucleic acids |
EP2182079A1 (en) | 2006-07-12 | 2010-05-05 | Keygene N.V. | High throughput physical mapping using AFLP |
EP2189540A1 (en) | 2005-07-20 | 2010-05-26 | Illumina Cambridge Limited | Methods for sequencing a polynucleotide template |
US7754475B2 (en) | 2006-01-25 | 2010-07-13 | Agilent Technologies, Inc. | Nucleic acid probes and microarrays for analysis of polynucleotides |
WO2010082815A1 (en) | 2009-01-13 | 2010-07-22 | Keygene N.V. | Novel genome sequencing strategies |
US7772384B2 (en) | 2001-12-04 | 2010-08-10 | Illumina Cambridge Limited | Labelled nucleotides |
EP2270206A2 (en) | 2003-10-20 | 2011-01-05 | Isis Innovation Ltd | Nucleic acid sequencing methods |
US7897345B2 (en) | 2003-11-12 | 2011-03-01 | Helicos Biosciences Corporation | Short cycle methods for sequencing polynucleotides |
EP2336315A2 (en) | 2005-12-01 | 2011-06-22 | Nuevolution A/S | Enzymatic encoding methods for efficient synthesis of large libraries |
US7981604B2 (en) | 2004-02-19 | 2011-07-19 | California Institute Of Technology | Methods and kits for analyzing polynucleotide sequences |
WO2012034007A2 (en) | 2010-09-10 | 2012-03-15 | Bio-Rad Laboratories, Inc. | Size selection of dna for chromatin analysis |
WO2013009175A1 (en) | 2011-07-08 | 2013-01-17 | Keygene N.V. | Sequence based genotyping based on oligonucleotide ligation assays |
WO2014135223A1 (en) | 2013-03-08 | 2014-09-12 | Illumina Cambridge Ltd | Rhodamine compounds and their use as fluorescent labels |
WO2014135669A1 (en) | 2013-03-08 | 2014-09-12 | Roche Diagnostics Gmbh | Egfr mutation blood testing |
WO2014135221A1 (en) | 2013-03-08 | 2014-09-12 | Illumina Cambridge Ltd | Polymethine compounds and their use as fluorescent labels |
WO2014181115A2 (en) | 2013-05-08 | 2014-11-13 | Iles Ray Kruse | Cgb2 and cgb1 genes; diagnosis, monitoring and treatment of cancer |
US9051612B2 (en) | 2006-09-28 | 2015-06-09 | Illumina, Inc. | Compositions and methods for nucleotide sequencing |
US9096898B2 (en) | 1998-05-01 | 2015-08-04 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US9206418B2 (en) | 2011-10-19 | 2015-12-08 | Nugen Technologies, Inc. | Compositions and methods for directional nucleic acid amplification and sequencing |
US9212394B2 (en) | 2013-08-19 | 2015-12-15 | Singular Bio, Inc. | Assays for single molecule detection and use thereof |
EP2963127A1 (en) | 2006-04-04 | 2016-01-06 | Keygene N.V. | High throughput detection of molecular markers based on restriction fragments |
US9347093B2 (en) | 2011-11-17 | 2016-05-24 | Vilnius University | Nucleic acid production and sequence analysis |
EP1907583B1 (en) | 2005-06-15 | 2016-10-05 | Complete Genomics Inc. | Single molecule arrays for genetic and chemical analysis |
US9650628B2 (en) | 2012-01-26 | 2017-05-16 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library regeneration |
WO2017087823A1 (en) | 2015-11-18 | 2017-05-26 | Mir Kalim U | Super-resolution sequencing |
US9670539B2 (en) | 2007-10-19 | 2017-06-06 | The Trustees Of Columbia University In The City Of New York | Synthesis of cleavable fluorescent nucleotides as reversible terminators for DNA sequencing by synthesis |
US20170166961A1 (en) | 2013-03-15 | 2017-06-15 | Illumina Cambridge Limited | Modified nucleosides or nucleotides |
US20170175185A1 (en) * | 2005-03-29 | 2017-06-22 | Applied Biosystems, Llc | Nanowire-based system for analysis of nucleic acids |
US9708358B2 (en) | 2000-10-06 | 2017-07-18 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US9718852B2 (en) | 2000-10-06 | 2017-08-01 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
EP3170904B1 (en) | 2008-03-28 | 2017-08-16 | Pacific Biosciences Of California, Inc. | Compositions and methods for nucleic acid sequencing |
US9745614B2 (en) | 2014-02-28 | 2017-08-29 | Nugen Technologies, Inc. | Reduced representation bisulfite sequencing with diversity adaptors |
US9822408B2 (en) | 2013-03-15 | 2017-11-21 | Nugen Technologies, Inc. | Sequential sequencing |
US9868982B2 (en) | 2007-02-07 | 2018-01-16 | Illumina Cambridge Limited | Preparation of templates for methylation analysis |
WO2018060482A1 (en) | 2016-09-30 | 2018-04-05 | Illumina Cambridge Limited | New fluorescent dyes and their uses as biomarkers |
US9957549B2 (en) | 2012-06-18 | 2018-05-01 | Nugen Technologies, Inc. | Compositions and methods for negative selection of non-desired nucleic acid sequences |
WO2018114710A1 (en) | 2016-12-22 | 2018-06-28 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
WO2018148727A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from 9°n |
WO2018148726A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from phage t4 |
WO2018148723A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from pyrococcus abyssi |
WO2018148724A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from pyrococcus furiosus |
US10102337B2 (en) | 2014-08-06 | 2018-10-16 | Nugen Technologies, Inc. | Digital measurements from targeted sequencing |
US10239909B2 (en) | 2015-05-22 | 2019-03-26 | Illumina Cambridge Limited | Polymethine compounds with long stokes shifts and their use as fluorescent labels |
US10260094B2 (en) | 2007-10-19 | 2019-04-16 | The Trustees Of Columbia University In The City Of New York | DNA sequencing with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators |
US10465232B1 (en) | 2015-10-08 | 2019-11-05 | Trace Genomics, Inc. | Methods for quantifying efficiency of nucleic acid extraction and detection |
US10487102B2 (en) | 2002-08-23 | 2019-11-26 | Illumina Cambridge Limited | Labelled nucleotides |
US10526648B2 (en) | 2017-07-12 | 2020-01-07 | Illumina Cambridge Limited | Short pendant arm linkers for nucleotides in sequencing applications |
US10570448B2 (en) | 2013-11-13 | 2020-02-25 | Tecan Genomics | Compositions and methods for identification of a duplicate sequencing read |
US10648026B2 (en) | 2013-03-15 | 2020-05-12 | The Trustees Of Columbia University In The City Of New York | Raman cluster tagged molecules for biological imaging |
EP3663290A1 (en) | 2015-09-25 | 2020-06-10 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
WO2020136170A2 (en) | 2018-12-26 | 2020-07-02 | Illumina Cambridge Limited | Nucleosides and nucleotides with 3'-hydroxy blocking groups |
WO2020178165A1 (en) | 2019-03-01 | 2020-09-10 | Illumina Cambridge Limited | Tertiary amine substituted coumarin compounds and their uses as fluorescent labels |
WO2020178162A1 (en) | 2019-03-01 | 2020-09-10 | Illumina Cambridge Limited | Exocyclic amine-substituted coumarin compounds and their uses as fluorescent labels |
WO2020178231A1 (en) | 2019-03-01 | 2020-09-10 | Illumina, Inc. | Multiplexed fluorescent detection of analytes |
NL2023327B1 (en) | 2019-03-01 | 2020-09-17 | Illumina Inc | Multiplexed fluorescent detection of analytes |
WO2020193765A1 (en) | 2019-03-28 | 2020-10-01 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing using photoswitchable labels |
US10995111B2 (en) | 2003-08-22 | 2021-05-04 | Illumina Cambridge Limited | Labelled nucleotides |
EP3828167A1 (en) | 2014-05-07 | 2021-06-02 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
WO2021104845A1 (en) | 2019-11-27 | 2021-06-03 | Illumina Cambridge Limited | Cyclooctatetraene containing dyes and compositions |
US11028430B2 (en) | 2012-07-09 | 2021-06-08 | Nugen Technologies, Inc. | Methods for creating directional bisulfite-converted nucleic acid libraries for next generation sequencing |
US11099202B2 (en) | 2017-10-20 | 2021-08-24 | Tecan Genomics, Inc. | Reagent delivery system |
US11098353B2 (en) | 2006-12-01 | 2021-08-24 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators |
WO2021259881A1 (en) | 2020-06-22 | 2021-12-30 | Illumina Cambridge Limited | Nucleosides and nucleotides with 3' acetal blocking group |
WO2022023353A1 (en) | 2020-07-28 | 2022-02-03 | Illumina Cambridge Limited | Substituted coumarin dyes and uses as fluorescent labels |
EP4006150A1 (en) | 2015-09-09 | 2022-06-01 | QIAGEN GmbH | Polymerase enzyme |
WO2022129437A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Long stokes shift chromenoquinoline dyes and uses in sequencing applications |
WO2022129930A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Alkylpyridinium coumarin dyes and uses in sequencing applications |
WO2022129439A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Methods, systems and compositions for nucleic acid sequencing |
WO2022136402A1 (en) | 2020-12-22 | 2022-06-30 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing |
US11390619B2 (en) | 2017-10-16 | 2022-07-19 | Illumina Cambridge Limited | Secondary amine-substituted coumarin compounds and their uses as fluorescent labels |
WO2022233795A1 (en) | 2021-05-05 | 2022-11-10 | Illumina Cambridge Limited | Fluorescent dyes containing bis-boron fused heterocycles and uses in sequencing |
WO2022243480A1 (en) | 2021-05-20 | 2022-11-24 | Illumina, Inc. | Compositions and methods for sequencing by synthesis |
WO2023114896A1 (en) | 2021-12-16 | 2023-06-22 | Illumina Cambridge Limited | Methods for metal directed cleavage of surface-bound polynucleotides |
WO2023122491A1 (en) | 2021-12-20 | 2023-06-29 | Illumina Cambridge Limited | Periodate compositions and methods for chemical cleavage of surface-bound polynucleotides |
WO2023122499A1 (en) | 2021-12-20 | 2023-06-29 | Illumina Cambridge Limited | Periodate compositions and methods for chemical cleavage of surface-bound polynucleotides |
WO2023141154A1 (en) | 2022-01-20 | 2023-07-27 | Illumina Cambridge Limited | Methods of detecting methylcytosine and hydroxymethylcytosine by sequencing |
US11739371B2 (en) | 2015-02-18 | 2023-08-29 | Invitae Corporation | Arrays for single molecule detection and use thereof |
WO2023186872A1 (en) | 2022-03-30 | 2023-10-05 | Illumina Cambridge Limited | Methods for chemical cleavage of surface-bound polynucleotides |
WO2023186819A1 (en) | 2022-03-29 | 2023-10-05 | Illumina Cambridge Limited | Chromenoquinoline dyes and uses in sequencing |
WO2023186815A1 (en) | 2022-03-28 | 2023-10-05 | Illumina Cambridge Limited | Labeled avidin and methods for sequencing |
WO2023192900A1 (en) | 2022-03-31 | 2023-10-05 | Illumina Singapore Pte. Ltd. | Nucleosides and nucleotides with 3' vinyl blocking group useful in sequencing by synthesis |
WO2023186982A1 (en) | 2022-03-31 | 2023-10-05 | Illumina, Inc. | Compositions and methods for improving sequencing signals |
WO2023232829A1 (en) | 2022-05-31 | 2023-12-07 | Illumina, Inc | Compositions and methods for nucleic acid sequencing |
WO2024003087A1 (en) | 2022-06-28 | 2024-01-04 | Illumina, Inc. | Fluorescent dyes containing fused tetracyclic bis-boron heterocycle and uses in sequencing |
US11866741B2 (en) | 2017-02-13 | 2024-01-09 | IsoPlexis Corporation | Polymerase enzyme from 9°N |
WO2024039516A1 (en) | 2022-08-19 | 2024-02-22 | Illumina, Inc. | Third dna base pair site-specific dna detection |
WO2024068889A2 (en) | 2022-09-30 | 2024-04-04 | Illumina, Inc. | Compositions and methods for reducing photo damage during sequencing |
Families Citing this family (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US7211414B2 (en) | 2000-12-01 | 2007-05-01 | Visigen Biotechnologies, Inc. | Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity |
Citations (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1990013666A1 (en) * | 1989-05-11 | 1990-11-15 | Amersham International Plc | Sequencing method |
EP0427073A2 (en) * | 1989-11-09 | 1991-05-15 | Miles Inc. | Nucleic acid amplification employing ligatable hairpin probe and transcription |
US5302509A (en) * | 1989-08-14 | 1994-04-12 | Beckman Instruments, Inc. | Method for sequencing polynucleotides |
EP0721016A2 (en) * | 1994-10-21 | 1996-07-10 | Affymax Technologies N.V. | Nucleic acid library arrays, methods for synthesizing them and methods for sequencing and sample screening using them |
WO1996027025A1 (en) * | 1995-02-27 | 1996-09-06 | Ely Michael Rabani | Device, compounds, algorithms, and methods of molecular characterization and manipulation with molecular parallelism |
WO1997004131A1 (en) * | 1995-07-21 | 1997-02-06 | Forsyth Dental Infirmary For Children | Single primer amplification of polynucleotide hairpins |
WO1997008183A1 (en) * | 1995-08-25 | 1997-03-06 | Lane Michael J | Nucleic acid capture moieties |
WO1998003673A1 (en) * | 1996-07-19 | 1998-01-29 | Cornell Research Foundation, Inc. | High fidelity detection of nucleic acid differences by ligase detection reaction |
WO1998020019A1 (en) * | 1996-11-06 | 1998-05-14 | Sequenom, Inc. | Compositions and methods for immobilizing nucleic acids to solid supports |
WO1999005321A1 (en) * | 1997-07-22 | 1999-02-04 | Rapigene, Inc. | Amplification and other enzymatic reactions performed on nucleic acid arrays |
WO1999028494A1 (en) * | 1997-12-04 | 1999-06-10 | Packard Bioscience Company | Methods of using probes for analyzing polynucleotide sequence |
EP0995804A2 (en) * | 1998-09-15 | 2000-04-26 | Affymetrix, Inc. (a California Corporation) | Nucleic acid analysis using complete N-mer arrays |
WO2001025485A2 (en) * | 1999-10-06 | 2001-04-12 | Amersham Biosciences Corp | Method for detecting mutations using arrayed primer extension |
-
2000
- 2000-02-01 GB GBGB0002310.1A patent/GB0002310D0/en not_active Ceased
-
2001
- 2001-01-31 IL IL15083601A patent/IL150836A0/en unknown
- 2001-01-31 AU AU30384/01A patent/AU3038401A/en not_active Abandoned
- 2001-01-31 JP JP2001555871A patent/JP2003521693A/en not_active Withdrawn
- 2001-01-31 EP EP01902529A patent/EP1252332A2/en not_active Withdrawn
- 2001-01-31 CA CA002398168A patent/CA2398168A1/en not_active Abandoned
- 2001-01-31 WO PCT/GB2001/000407 patent/WO2001057248A2/en not_active Application Discontinuation
-
2002
- 2002-07-31 IS IS6489A patent/IS6489A/en unknown
- 2002-12-23 HK HK02109277.3A patent/HK1047771A1/en unknown
Patent Citations (13)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO1990013666A1 (en) * | 1989-05-11 | 1990-11-15 | Amersham International Plc | Sequencing method |
US5302509A (en) * | 1989-08-14 | 1994-04-12 | Beckman Instruments, Inc. | Method for sequencing polynucleotides |
EP0427073A2 (en) * | 1989-11-09 | 1991-05-15 | Miles Inc. | Nucleic acid amplification employing ligatable hairpin probe and transcription |
EP0721016A2 (en) * | 1994-10-21 | 1996-07-10 | Affymax Technologies N.V. | Nucleic acid library arrays, methods for synthesizing them and methods for sequencing and sample screening using them |
WO1996027025A1 (en) * | 1995-02-27 | 1996-09-06 | Ely Michael Rabani | Device, compounds, algorithms, and methods of molecular characterization and manipulation with molecular parallelism |
WO1997004131A1 (en) * | 1995-07-21 | 1997-02-06 | Forsyth Dental Infirmary For Children | Single primer amplification of polynucleotide hairpins |
WO1997008183A1 (en) * | 1995-08-25 | 1997-03-06 | Lane Michael J | Nucleic acid capture moieties |
WO1998003673A1 (en) * | 1996-07-19 | 1998-01-29 | Cornell Research Foundation, Inc. | High fidelity detection of nucleic acid differences by ligase detection reaction |
WO1998020019A1 (en) * | 1996-11-06 | 1998-05-14 | Sequenom, Inc. | Compositions and methods for immobilizing nucleic acids to solid supports |
WO1999005321A1 (en) * | 1997-07-22 | 1999-02-04 | Rapigene, Inc. | Amplification and other enzymatic reactions performed on nucleic acid arrays |
WO1999028494A1 (en) * | 1997-12-04 | 1999-06-10 | Packard Bioscience Company | Methods of using probes for analyzing polynucleotide sequence |
EP0995804A2 (en) * | 1998-09-15 | 2000-04-26 | Affymetrix, Inc. (a California Corporation) | Nucleic acid analysis using complete N-mer arrays |
WO2001025485A2 (en) * | 1999-10-06 | 2001-04-12 | Amersham Biosciences Corp | Method for detecting mutations using arrayed primer extension |
Non-Patent Citations (3)
Title |
---|
BROUDE N E ET AL: "ENHANCED DNA SEQUENCING BY HYBRIDIZATION" PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF USA, NATIONAL ACADEMY OF SCIENCE. WASHINGTON, US, vol. 91, 1 April 1994 (1994-04-01), pages 3072-3076, XP000619675 ISSN: 0027-8424 * |
PASTINEN T ET AL: "MINISEQUENCING: A SPECIFIC TOOL FOR DNA ANALYSIS AND DIAGNOSTICS ON OLIGONUCLEOTIDE ARRAYS" PCR METHODS AND APPLICATIONS, COLD SPRING HARBOR, NY, US, 1997, pages 606-614, XP002930983 ISSN: 1054-9803 * |
ZHAO XIAODONG ET AL: "Immobilization of oligodeoxyribonucleotides with multiple anchors to microchips." NUCLEIC ACIDS RESEARCH, vol. 29, no. 4, 15 February 2001 (2001-02-15), pages 955-959, XP002175040 ISSN: 0305-1048 * |
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Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US7645596B2 (en) | 1998-05-01 | 2010-01-12 | Arizona Board Of Regents | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US10214774B2 (en) | 1998-05-01 | 2019-02-26 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US9957561B2 (en) | 1998-05-01 | 2018-05-01 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US10208341B2 (en) | 1998-05-01 | 2019-02-19 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
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US9096898B2 (en) | 1998-05-01 | 2015-08-04 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US9212393B2 (en) | 1998-05-01 | 2015-12-15 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US9725764B2 (en) | 1998-05-01 | 2017-08-08 | Life Technologies Corporation | Method of determining the nucleotide sequence of oligonucleotides and DNA molecules |
US7943305B2 (en) | 1999-05-19 | 2011-05-17 | Cornell Research Foundation | High speed nucleic acid sequencing |
US7943307B2 (en) | 1999-05-19 | 2011-05-17 | Cornell Research Foundation | Methods for analyzing nucleic acid sequences |
US7033764B2 (en) | 1999-05-19 | 2006-04-25 | Cornell Research Foundation, Inc. | Method for sequencing nucleic acid molecules |
US7052847B2 (en) | 1999-05-19 | 2006-05-30 | Cornell Research Foundation, Inc. | Method for sequencing nucleic acid molecules |
US7056676B2 (en) | 1999-05-19 | 2006-06-06 | Cornell Research Foundation, Inc. | Method for sequencing nucleic acid molecules |
US7056661B2 (en) | 1999-05-19 | 2006-06-06 | Cornell Research Foundation, Inc. | Method for sequencing nucleic acid molecules |
US7485424B2 (en) | 1999-05-19 | 2009-02-03 | Cornell Research Foundation, Inc. | Labeled nucleotide phosphate (NP) probes |
US7416844B2 (en) | 1999-05-19 | 2008-08-26 | Cornell Research Foundation, Inc. | Composition for nucleic acid sequencing |
US7361466B2 (en) | 1999-05-19 | 2008-04-22 | Cornell Research Foundation, Inc. | Nucleic acid analysis using terminal-phosphate-labeled nucleotides |
US6818395B1 (en) | 1999-06-28 | 2004-11-16 | California Institute Of Technology | Methods and apparatus for analyzing polynucleotide sequences |
US9719139B2 (en) | 2000-10-06 | 2017-08-01 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US10407458B2 (en) | 2000-10-06 | 2019-09-10 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US9718852B2 (en) | 2000-10-06 | 2017-08-01 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US10669577B2 (en) | 2000-10-06 | 2020-06-02 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US10577652B2 (en) | 2000-10-06 | 2020-03-03 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US10669582B2 (en) | 2000-10-06 | 2020-06-02 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
US10570446B2 (en) | 2000-10-06 | 2020-02-25 | The Trustee Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
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US9725480B2 (en) | 2000-10-06 | 2017-08-08 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
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US9868985B2 (en) | 2000-10-06 | 2018-01-16 | The Trustees Of Columbia University In The City Of New York | Massive parallel method for decoding DNA and RNA |
WO2002061127A2 (en) * | 2001-01-30 | 2002-08-08 | Solexa Ltd. | Arrayed polynucleotides and their use in genome analysis |
GB2389904A (en) * | 2001-01-30 | 2003-12-24 | Solexa Ltd | Arrayed polynucleotides and their use in genome analysis |
WO2002061127A3 (en) * | 2001-01-30 | 2003-07-24 | Solexa Ltd | Arrayed polynucleotides and their use in genome analysis |
WO2002074988A2 (en) * | 2001-03-16 | 2002-09-26 | The Chancellor, Master And Scholars Of The University Of Oxford | Arrays and methods of use |
US9057730B2 (en) | 2001-03-16 | 2015-06-16 | Singular Bio, Inc. | Arrays and methods of use |
WO2002074988A3 (en) * | 2001-03-16 | 2003-08-14 | Chancellor Master And Scholars | Arrays and methods of use |
US9376677B2 (en) | 2001-03-16 | 2016-06-28 | Singular Bio, Inc. | Arrays and methods of use |
US9481883B2 (en) | 2001-03-16 | 2016-11-01 | Singular Bio, Inc. | Arrays and methods of use |
WO2003016565A3 (en) * | 2001-08-13 | 2003-08-21 | Solexa Ltd | Dna sequence analysis |
WO2003016565A2 (en) * | 2001-08-13 | 2003-02-27 | Solexa Ltd | Dna sequence analysis |
US10519496B2 (en) | 2001-12-04 | 2019-12-31 | Illumina Cambridge Limited | Labelled nucleotides |
US10480025B2 (en) | 2001-12-04 | 2019-11-19 | Illumina Cambridge Limited | Labelled nucleotides |
US7566537B2 (en) | 2001-12-04 | 2009-07-28 | Illumina Cambridge Limited | Labelled nucleotides |
US7785796B2 (en) | 2001-12-04 | 2010-08-31 | Illumina Cambridge Limited | Labelled nucleotides |
US9605310B2 (en) | 2001-12-04 | 2017-03-28 | Illumina Cambridge Limited | Labelled nucleotides |
US8148064B2 (en) | 2001-12-04 | 2012-04-03 | Illumina Cambridge Limited | Labelled nucleotides |
US8158346B2 (en) | 2001-12-04 | 2012-04-17 | Illumina Cambridge Limited | Labelled nucleotides |
US7772384B2 (en) | 2001-12-04 | 2010-08-10 | Illumina Cambridge Limited | Labelled nucleotides |
US7427673B2 (en) | 2001-12-04 | 2008-09-23 | Illumina Cambridge Limited | Labelled nucleotides |
US11008359B2 (en) | 2002-08-23 | 2021-05-18 | Illumina Cambridge Limited | Labelled nucleotides |
US7541444B2 (en) | 2002-08-23 | 2009-06-02 | Illumina Cambridge Limited | Modified nucleotides |
US10513731B2 (en) | 2002-08-23 | 2019-12-24 | Illumina Cambridge Limited | Modified nucleotides |
US8071739B2 (en) | 2002-08-23 | 2011-12-06 | Illumina Cambridge Limited | Modified nucleotides |
US10487102B2 (en) | 2002-08-23 | 2019-11-26 | Illumina Cambridge Limited | Labelled nucleotides |
WO2004027093A1 (en) * | 2002-09-19 | 2004-04-01 | The Chancellor, Master And Scholars Of The University Of Oxford | Molecular arrays and single molecule detection |
US7771973B2 (en) | 2002-12-23 | 2010-08-10 | Illumina Cambridge Limited | Modified nucleotides |
WO2004076692A1 (en) * | 2003-02-26 | 2004-09-10 | Solexa Limited | Dna sequence analysis |
US7351532B2 (en) | 2003-02-26 | 2008-04-01 | Solexa Limited | DNA sequence analysis |
US11028115B2 (en) | 2003-08-22 | 2021-06-08 | Illumina Cambridge Limited | Labelled nucleotides |
US11028116B2 (en) | 2003-08-22 | 2021-06-08 | Illumina Cambridge Limited | Labelled nucleotides |
US10995111B2 (en) | 2003-08-22 | 2021-05-04 | Illumina Cambridge Limited | Labelled nucleotides |
EP2270206A2 (en) | 2003-10-20 | 2011-01-05 | Isis Innovation Ltd | Nucleic acid sequencing methods |
EP2270205A2 (en) | 2003-10-20 | 2011-01-05 | Isis Innovation Ltd | Nucleic acid sequencing methods |
EP2431481A1 (en) | 2003-10-20 | 2012-03-21 | Kalim Mir | Parallel polymer sequencing methods |
WO2005044836A2 (en) | 2003-11-05 | 2005-05-19 | Genovoxx Gmbh | Macromolecular nucleotide compounds and methods for using the same |
US7897345B2 (en) | 2003-11-12 | 2011-03-01 | Helicos Biosciences Corporation | Short cycle methods for sequencing polynucleotides |
US9012144B2 (en) | 2003-11-12 | 2015-04-21 | Fluidigm Corporation | Short cycle methods for sequencing polynucleotides |
US9657344B2 (en) | 2003-11-12 | 2017-05-23 | Fluidigm Corporation | Short cycle methods for sequencing polynucleotides |
US7981604B2 (en) | 2004-02-19 | 2011-07-19 | California Institute Of Technology | Methods and kits for analyzing polynucleotide sequences |
US9709503B2 (en) | 2004-09-17 | 2017-07-18 | Pacific Biosciences Of California, Inc. | Apparatus and method for performing nucleic acid analysis |
US7170050B2 (en) | 2004-09-17 | 2007-01-30 | Pacific Biosciences Of California, Inc. | Apparatus and methods for optical analysis of molecules |
US10415090B2 (en) * | 2005-03-29 | 2019-09-17 | Applied Biosystems, Llc | Nanowire-based system for analysis of nucleic acids |
US10961575B2 (en) | 2005-03-29 | 2021-03-30 | Applied Biosystems, Llc | Nanowire-based system for analysis of nucleic acids |
US20170175185A1 (en) * | 2005-03-29 | 2017-06-22 | Applied Biosystems, Llc | Nanowire-based system for analysis of nucleic acids |
US9944984B2 (en) | 2005-06-15 | 2018-04-17 | Complete Genomics, Inc. | High density DNA array |
EP1907583B2 (en) † | 2005-06-15 | 2019-10-23 | Complete Genomics Inc. | Single molecule arrays for genetic and chemical analysis |
US10351909B2 (en) | 2005-06-15 | 2019-07-16 | Complete Genomics, Inc. | DNA sequencing from high density DNA arrays using asynchronous reactions |
EP2620510B1 (en) | 2005-06-15 | 2016-10-12 | Complete Genomics Inc. | Single molecule arrays for genetic and chemical analysis |
EP1907583B1 (en) | 2005-06-15 | 2016-10-05 | Complete Genomics Inc. | Single molecule arrays for genetic and chemical analysis |
EP1739192A1 (en) * | 2005-07-01 | 2007-01-03 | Agilent Technologies, Inc. | Nucleic acid probes for analysis of small RNAs and other polynucleotides |
US9297036B2 (en) | 2005-07-01 | 2016-03-29 | Agilent Technologies, Inc | Nucleic acid probes for analysis of small RNAs and other polynucleotides |
US11542553B2 (en) | 2005-07-20 | 2023-01-03 | Illumina Cambridge Limited | Methods for sequencing a polynucleotide template |
US10793904B2 (en) | 2005-07-20 | 2020-10-06 | Illumina Cambridge Limited | Methods for sequencing a polynucleotide template |
US9765391B2 (en) | 2005-07-20 | 2017-09-19 | Illumina Cambridge Limited | Methods for sequencing a polynucleotide template |
EP2189540A1 (en) | 2005-07-20 | 2010-05-26 | Illumina Cambridge Limited | Methods for sequencing a polynucleotide template |
US8071312B2 (en) | 2005-08-02 | 2011-12-06 | Rubicon Genomics, Inc. | Methods for producing and using stem-loop oligonucleotides |
US11072823B2 (en) | 2005-08-02 | 2021-07-27 | Takara Bio Usa, Inc. | Compositions including a double stranded nucleic acid molecule and a stem-loop oligonucleotide |
US10196686B2 (en) | 2005-08-02 | 2019-02-05 | Takara Bio Usa, Inc. | Kits including stem-loop oligonucleotides for use in preparing nucleic acid molecules |
US10208337B2 (en) | 2005-08-02 | 2019-02-19 | Takara Bio Usa, Inc. | Compositions including a double stranded nucleic acid molecule and a stem-loop oligonucleotide |
US7803550B2 (en) | 2005-08-02 | 2010-09-28 | Rubicon Genomics, Inc. | Methods of producing nucleic acid molecules comprising stem loop oligonucleotides |
US8728737B2 (en) | 2005-08-02 | 2014-05-20 | Rubicon Genomics, Inc. | Attaching a stem-loop oligonucleotide to a double stranded DNA molecule |
US8399199B2 (en) | 2005-08-02 | 2013-03-19 | Rubicon Genomics | Use of stem-loop oligonucleotides in the preparation of nucleic acid molecules |
WO2007018601A1 (en) * | 2005-08-02 | 2007-02-15 | Rubicon Genomics, Inc. | Compositions and methods for processing and amplification of dna, including using multiple enzymes in a single reaction |
US9598727B2 (en) | 2005-08-02 | 2017-03-21 | Rubicon Genomics, Inc. | Methods for processing and amplifying nucleic acids |
US7592435B2 (en) | 2005-08-19 | 2009-09-22 | Illumina Cambridge Limited | Modified nucleosides and nucleotides and uses thereof |
US9868978B2 (en) | 2005-08-26 | 2018-01-16 | Fluidigm Corporation | Single molecule sequencing of captured nucleic acids |
US7666593B2 (en) | 2005-08-26 | 2010-02-23 | Helicos Biosciences Corporation | Single molecule sequencing of captured nucleic acids |
EP3305900A1 (en) | 2005-12-01 | 2018-04-11 | Nuevolution A/S | Enzymatic encoding methods for efficient synthesis of large libraries |
EP2341140A1 (en) | 2005-12-01 | 2011-07-06 | Nuevolution A/S | Enzymatic encoding methods for efficient synthesis of large libraries |
EP2336315A2 (en) | 2005-12-01 | 2011-06-22 | Nuevolution A/S | Enzymatic encoding methods for efficient synthesis of large libraries |
US7754475B2 (en) | 2006-01-25 | 2010-07-13 | Agilent Technologies, Inc. | Nucleic acid probes and microarrays for analysis of polynucleotides |
EP2963127A1 (en) | 2006-04-04 | 2016-01-06 | Keygene N.V. | High throughput detection of molecular markers based on restriction fragments |
EP2182079A1 (en) | 2006-07-12 | 2010-05-05 | Keygene N.V. | High throughput physical mapping using AFLP |
EP2275576A1 (en) | 2006-07-12 | 2011-01-19 | Keygene N.V. | High throughput physical mapping using AFLP |
EP2821506A1 (en) | 2006-07-12 | 2015-01-07 | Keygene N.V. | Identification of clones by sequencing of pool-specific adapters |
US9051612B2 (en) | 2006-09-28 | 2015-06-09 | Illumina, Inc. | Compositions and methods for nucleotide sequencing |
US11939631B2 (en) | 2006-12-01 | 2024-03-26 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators |
US11098353B2 (en) | 2006-12-01 | 2021-08-24 | The Trustees Of Columbia University In The City Of New York | Four-color DNA sequencing by synthesis using cleavable fluorescent nucleotide reversible terminators |
US9868982B2 (en) | 2007-02-07 | 2018-01-16 | Illumina Cambridge Limited | Preparation of templates for methylation analysis |
US10954554B2 (en) | 2007-02-07 | 2021-03-23 | Illumina Cambridge Limited | Preparation of templates for methylation analysis |
US11827927B2 (en) | 2007-02-07 | 2023-11-28 | Illumina Cambridge Limited | Preparation of templates for methylation analysis |
US10260094B2 (en) | 2007-10-19 | 2019-04-16 | The Trustees Of Columbia University In The City Of New York | DNA sequencing with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators |
US10144961B2 (en) | 2007-10-19 | 2018-12-04 | The Trustees Of Columbia University In The City Of New York | Synthesis of cleavable fluorescent nucleotides as reversible terminators for DNA sequencing by synthesis |
US9670539B2 (en) | 2007-10-19 | 2017-06-06 | The Trustees Of Columbia University In The City Of New York | Synthesis of cleavable fluorescent nucleotides as reversible terminators for DNA sequencing by synthesis |
US11242561B2 (en) | 2007-10-19 | 2022-02-08 | The Trustees Of Columbia University In The City Of New York | DNA sequencing with non-fluorescent nucleotide reversible terminators and cleavable label modified nucleotide terminators |
US11208691B2 (en) | 2007-10-19 | 2021-12-28 | The Trustees Of Columbia University In The City Of New York | Synthesis of cleavable fluorescent nucleotides as reversible terminators for DNA sequencing by synthesis |
WO2009116863A2 (en) | 2008-03-17 | 2009-09-24 | Expressive Research B.V. | Expression-linked gene discovery |
US11705217B2 (en) | 2008-03-28 | 2023-07-18 | Pacific Biosciences Of California, Inc. | Sequencing using concatemers of copies of sense and antisense strands |
EP3170904B1 (en) | 2008-03-28 | 2017-08-16 | Pacific Biosciences Of California, Inc. | Compositions and methods for nucleic acid sequencing |
WO2010082815A1 (en) | 2009-01-13 | 2010-07-22 | Keygene N.V. | Novel genome sequencing strategies |
WO2012034007A2 (en) | 2010-09-10 | 2012-03-15 | Bio-Rad Laboratories, Inc. | Size selection of dna for chromatin analysis |
WO2013009175A1 (en) | 2011-07-08 | 2013-01-17 | Keygene N.V. | Sequence based genotyping based on oligonucleotide ligation assays |
EP2980226A1 (en) | 2011-07-08 | 2016-02-03 | Keygene N.V. | Sequence based genotyping based on oligonucleotide ligation assays |
US9206418B2 (en) | 2011-10-19 | 2015-12-08 | Nugen Technologies, Inc. | Compositions and methods for directional nucleic acid amplification and sequencing |
US9347093B2 (en) | 2011-11-17 | 2016-05-24 | Vilnius University | Nucleic acid production and sequence analysis |
US9988673B2 (en) | 2011-11-17 | 2018-06-05 | Vilnius University | Nucleic acid production and sequence analysis |
US9650628B2 (en) | 2012-01-26 | 2017-05-16 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library regeneration |
US10036012B2 (en) | 2012-01-26 | 2018-07-31 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library generation |
US10876108B2 (en) | 2012-01-26 | 2020-12-29 | Nugen Technologies, Inc. | Compositions and methods for targeted nucleic acid sequence enrichment and high efficiency library generation |
US9957549B2 (en) | 2012-06-18 | 2018-05-01 | Nugen Technologies, Inc. | Compositions and methods for negative selection of non-desired nucleic acid sequences |
US11028430B2 (en) | 2012-07-09 | 2021-06-08 | Nugen Technologies, Inc. | Methods for creating directional bisulfite-converted nucleic acid libraries for next generation sequencing |
US11697843B2 (en) | 2012-07-09 | 2023-07-11 | Tecan Genomics, Inc. | Methods for creating directional bisulfite-converted nucleic acid libraries for next generation sequencing |
WO2014135669A1 (en) | 2013-03-08 | 2014-09-12 | Roche Diagnostics Gmbh | Egfr mutation blood testing |
WO2014135223A1 (en) | 2013-03-08 | 2014-09-12 | Illumina Cambridge Ltd | Rhodamine compounds and their use as fluorescent labels |
WO2014135221A1 (en) | 2013-03-08 | 2014-09-12 | Illumina Cambridge Ltd | Polymethine compounds and their use as fluorescent labels |
US10648026B2 (en) | 2013-03-15 | 2020-05-12 | The Trustees Of Columbia University In The City Of New York | Raman cluster tagged molecules for biological imaging |
US10407721B2 (en) | 2013-03-15 | 2019-09-10 | Illumina Cambridge Limited | Modified nucleosides or nucleotides |
US9822408B2 (en) | 2013-03-15 | 2017-11-21 | Nugen Technologies, Inc. | Sequential sequencing |
US20170166961A1 (en) | 2013-03-15 | 2017-06-15 | Illumina Cambridge Limited | Modified nucleosides or nucleotides |
US10760123B2 (en) | 2013-03-15 | 2020-09-01 | Nugen Technologies, Inc. | Sequential sequencing |
US10619206B2 (en) | 2013-03-15 | 2020-04-14 | Tecan Genomics | Sequential sequencing |
US10982277B2 (en) | 2013-03-15 | 2021-04-20 | Illumina Cambridge Limited | Modified nucleosides or nucleotides |
WO2014181115A2 (en) | 2013-05-08 | 2014-11-13 | Iles Ray Kruse | Cgb2 and cgb1 genes; diagnosis, monitoring and treatment of cancer |
US10626450B2 (en) | 2013-08-19 | 2020-04-21 | Singular Bio, Inc. | Assays for single molecule detection and use thereof |
US9212394B2 (en) | 2013-08-19 | 2015-12-15 | Singular Bio, Inc. | Assays for single molecule detection and use thereof |
US11326204B2 (en) | 2013-08-19 | 2022-05-10 | Invitae Corporation | Assays for single molecule detection and use thereof |
US9758814B2 (en) | 2013-08-19 | 2017-09-12 | Singular Bio, Inc. | Assays for single molecule detection and use thereof |
US10570448B2 (en) | 2013-11-13 | 2020-02-25 | Tecan Genomics | Compositions and methods for identification of a duplicate sequencing read |
US11725241B2 (en) | 2013-11-13 | 2023-08-15 | Tecan Genomics, Inc. | Compositions and methods for identification of a duplicate sequencing read |
US11098357B2 (en) | 2013-11-13 | 2021-08-24 | Tecan Genomics, Inc. | Compositions and methods for identification of a duplicate sequencing read |
US9745614B2 (en) | 2014-02-28 | 2017-08-29 | Nugen Technologies, Inc. | Reduced representation bisulfite sequencing with diversity adaptors |
EP3828167A1 (en) | 2014-05-07 | 2021-06-02 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
US10102337B2 (en) | 2014-08-06 | 2018-10-16 | Nugen Technologies, Inc. | Digital measurements from targeted sequencing |
US11739371B2 (en) | 2015-02-18 | 2023-08-29 | Invitae Corporation | Arrays for single molecule detection and use thereof |
US10239909B2 (en) | 2015-05-22 | 2019-03-26 | Illumina Cambridge Limited | Polymethine compounds with long stokes shifts and their use as fluorescent labels |
EP4006150A1 (en) | 2015-09-09 | 2022-06-01 | QIAGEN GmbH | Polymerase enzyme |
EP3663290A1 (en) | 2015-09-25 | 2020-06-10 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
US10982261B2 (en) | 2015-09-25 | 2021-04-20 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
EP3831825A1 (en) | 2015-09-25 | 2021-06-09 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
US11530439B2 (en) | 2015-09-25 | 2022-12-20 | Illumina Cambridge Limited | Polymethine compounds and their use as fluorescent labels |
US10465232B1 (en) | 2015-10-08 | 2019-11-05 | Trace Genomics, Inc. | Methods for quantifying efficiency of nucleic acid extraction and detection |
WO2017087823A1 (en) | 2015-11-18 | 2017-05-26 | Mir Kalim U | Super-resolution sequencing |
EP3974425A1 (en) | 2016-09-30 | 2022-03-30 | Illumina Cambridge Limited | New fluorescent dyes and their uses as biomarkers |
US10844225B2 (en) | 2016-09-30 | 2020-11-24 | Illumina Cambridge Limited | Fluorescent dyes and their uses as biomarkers |
US11370920B2 (en) | 2016-09-30 | 2022-06-28 | Illumina Cambridge Limited | Fluorescent dyes and their uses as biomarkers |
WO2018060482A1 (en) | 2016-09-30 | 2018-04-05 | Illumina Cambridge Limited | New fluorescent dyes and their uses as biomarkers |
US10385214B2 (en) | 2016-09-30 | 2019-08-20 | Illumina Cambridge Limited | Fluorescent dyes and their uses as biomarkers |
US10214768B2 (en) | 2016-12-22 | 2019-02-26 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
US10533211B2 (en) | 2016-12-22 | 2020-01-14 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
US11371078B2 (en) | 2016-12-22 | 2022-06-28 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
WO2018114710A1 (en) | 2016-12-22 | 2018-06-28 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
US10907196B2 (en) | 2016-12-22 | 2021-02-02 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
EP4257596A2 (en) | 2016-12-22 | 2023-10-11 | Illumina Cambridge Limited | Coumarin compounds and their uses as fluorescent labels |
US11866741B2 (en) | 2017-02-13 | 2024-01-09 | IsoPlexis Corporation | Polymerase enzyme from 9°N |
WO2018148723A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from pyrococcus abyssi |
WO2018148724A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from pyrococcus furiosus |
WO2018148726A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from phage t4 |
WO2018148727A1 (en) | 2017-02-13 | 2018-08-16 | Qiagen Waltham Inc. | Polymerase enzyme from 9°n |
US10526648B2 (en) | 2017-07-12 | 2020-01-07 | Illumina Cambridge Limited | Short pendant arm linkers for nucleotides in sequencing applications |
US11001888B2 (en) | 2017-07-12 | 2021-05-11 | Illumina Cambridge Limited | Short pendant arm linkers for nucleotides in sequencing applications |
US11655502B2 (en) | 2017-07-12 | 2023-05-23 | Illumina Cambridge Limited | Short pendant arm linkers for nucleotides in sequencing applications |
US11858923B2 (en) | 2017-10-16 | 2024-01-02 | Illumina Cambridge Limited | Secondary amine-substituted coumarin compounds and their uses as fluorescent labels |
US11390619B2 (en) | 2017-10-16 | 2022-07-19 | Illumina Cambridge Limited | Secondary amine-substituted coumarin compounds and their uses as fluorescent labels |
US11099202B2 (en) | 2017-10-20 | 2021-08-24 | Tecan Genomics, Inc. | Reagent delivery system |
US11827931B2 (en) | 2018-12-26 | 2023-11-28 | Illumina Cambridge Limited | Methods of preparing growing polynucleotides using nucleotides with 3′ AOM blocking group |
US11293061B2 (en) | 2018-12-26 | 2022-04-05 | Illumina Cambridge Limited | Sequencing methods using nucleotides with 3′ AOM blocking group |
WO2020136170A2 (en) | 2018-12-26 | 2020-07-02 | Illumina Cambridge Limited | Nucleosides and nucleotides with 3'-hydroxy blocking groups |
WO2020178231A1 (en) | 2019-03-01 | 2020-09-10 | Illumina, Inc. | Multiplexed fluorescent detection of analytes |
US11884825B2 (en) | 2019-03-01 | 2024-01-30 | Illumina Cambridge Limited | Exocyclic amine substituted coumarin compounds and uses as fluorescent labels |
NL2023327B1 (en) | 2019-03-01 | 2020-09-17 | Illumina Inc | Multiplexed fluorescent detection of analytes |
US11390753B2 (en) | 2019-03-01 | 2022-07-19 | Illumina Cambridge Limited | Exocyclic amine substituted coumarin compounds and uses as fluorescent labels |
WO2020178162A1 (en) | 2019-03-01 | 2020-09-10 | Illumina Cambridge Limited | Exocyclic amine-substituted coumarin compounds and their uses as fluorescent labels |
WO2020178165A1 (en) | 2019-03-01 | 2020-09-10 | Illumina Cambridge Limited | Tertiary amine substituted coumarin compounds and their uses as fluorescent labels |
WO2020193765A1 (en) | 2019-03-28 | 2020-10-01 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing using photoswitchable labels |
US11421271B2 (en) | 2019-03-28 | 2022-08-23 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing using photoswitchable labels |
US11959138B2 (en) | 2019-03-28 | 2024-04-16 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing using photoswitchable labels |
US11597969B2 (en) | 2019-11-27 | 2023-03-07 | Illumina Cambridge Limited | Cyclooctatetraene containing dyes and compositions |
WO2021104845A1 (en) | 2019-11-27 | 2021-06-03 | Illumina Cambridge Limited | Cyclooctatetraene containing dyes and compositions |
US11787831B2 (en) | 2020-06-22 | 2023-10-17 | Illumina Cambridge Limited | Nucleosides and nucleotides with 3′ acetal blocking group |
WO2021259881A1 (en) | 2020-06-22 | 2021-12-30 | Illumina Cambridge Limited | Nucleosides and nucleotides with 3' acetal blocking group |
WO2022023353A1 (en) | 2020-07-28 | 2022-02-03 | Illumina Cambridge Limited | Substituted coumarin dyes and uses as fluorescent labels |
WO2022129439A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Methods, systems and compositions for nucleic acid sequencing |
WO2022129930A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Alkylpyridinium coumarin dyes and uses in sequencing applications |
WO2022129437A1 (en) | 2020-12-17 | 2022-06-23 | Illumina Cambridge Limited | Long stokes shift chromenoquinoline dyes and uses in sequencing applications |
WO2022136402A1 (en) | 2020-12-22 | 2022-06-30 | Illumina Cambridge Limited | Methods and compositions for nucleic acid sequencing |
WO2022233795A1 (en) | 2021-05-05 | 2022-11-10 | Illumina Cambridge Limited | Fluorescent dyes containing bis-boron fused heterocycles and uses in sequencing |
WO2022243480A1 (en) | 2021-05-20 | 2022-11-24 | Illumina, Inc. | Compositions and methods for sequencing by synthesis |
WO2023114896A1 (en) | 2021-12-16 | 2023-06-22 | Illumina Cambridge Limited | Methods for metal directed cleavage of surface-bound polynucleotides |
WO2023122499A1 (en) | 2021-12-20 | 2023-06-29 | Illumina Cambridge Limited | Periodate compositions and methods for chemical cleavage of surface-bound polynucleotides |
WO2023122491A1 (en) | 2021-12-20 | 2023-06-29 | Illumina Cambridge Limited | Periodate compositions and methods for chemical cleavage of surface-bound polynucleotides |
WO2023141154A1 (en) | 2022-01-20 | 2023-07-27 | Illumina Cambridge Limited | Methods of detecting methylcytosine and hydroxymethylcytosine by sequencing |
WO2023186815A1 (en) | 2022-03-28 | 2023-10-05 | Illumina Cambridge Limited | Labeled avidin and methods for sequencing |
WO2023192163A1 (en) | 2022-03-29 | 2023-10-05 | Illumina Cambridge Limited | Systems and methods of sequencing polynucleotides |
WO2023186819A1 (en) | 2022-03-29 | 2023-10-05 | Illumina Cambridge Limited | Chromenoquinoline dyes and uses in sequencing |
WO2023186872A1 (en) | 2022-03-30 | 2023-10-05 | Illumina Cambridge Limited | Methods for chemical cleavage of surface-bound polynucleotides |
WO2023186982A1 (en) | 2022-03-31 | 2023-10-05 | Illumina, Inc. | Compositions and methods for improving sequencing signals |
WO2023192900A1 (en) | 2022-03-31 | 2023-10-05 | Illumina Singapore Pte. Ltd. | Nucleosides and nucleotides with 3' vinyl blocking group useful in sequencing by synthesis |
WO2023232829A1 (en) | 2022-05-31 | 2023-12-07 | Illumina, Inc | Compositions and methods for nucleic acid sequencing |
WO2024003087A1 (en) | 2022-06-28 | 2024-01-04 | Illumina, Inc. | Fluorescent dyes containing fused tetracyclic bis-boron heterocycle and uses in sequencing |
WO2024039516A1 (en) | 2022-08-19 | 2024-02-22 | Illumina, Inc. | Third dna base pair site-specific dna detection |
WO2024068889A2 (en) | 2022-09-30 | 2024-04-04 | Illumina, Inc. | Compositions and methods for reducing photo damage during sequencing |
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IL150836A0 (en) | 2003-02-12 |
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