WO2001053456A3 - Methods and materials relating to prothrombinase-like polypeptides and polynucleotides - Google Patents

Methods and materials relating to prothrombinase-like polypeptides and polynucleotides Download PDF

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Publication number
WO2001053456A3
WO2001053456A3 PCT/US2000/035061 US0035061W WO0153456A3 WO 2001053456 A3 WO2001053456 A3 WO 2001053456A3 US 0035061 W US0035061 W US 0035061W WO 0153456 A3 WO0153456 A3 WO 0153456A3
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WO
WIPO (PCT)
Prior art keywords
polynucleotides
polypeptides
prothrombinase
methods
seq
Prior art date
Application number
PCT/US2000/035061
Other languages
French (fr)
Other versions
WO2001053456A9 (en
WO2001053456A8 (en
WO2001053456A2 (en
Inventor
Dana A Haley
Bryan J Boyle
Ho Alice Suk-Yue
Ping Zhou
Nancy K Mize
Chiauyun Kuo
Matthew C Arterburn
Y Tom Tang
Chenghua Liu
Radoje Drmanac
Original Assignee
Hyseq Inc
Dana A Haley
Bryan J Boyle
Suk Yue Ho Alice
Ping Zhou
Nancy K Mize
Chiauyun Kuo
Matthew C Arterburn
Y Tom Tang
Chenghua Liu
Radoje Drmanac
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/596,196 external-priority patent/US6586390B1/en
Priority claimed from US09/653,274 external-priority patent/US6635742B1/en
Application filed by Hyseq Inc, Dana A Haley, Bryan J Boyle, Suk Yue Ho Alice, Ping Zhou, Nancy K Mize, Chiauyun Kuo, Matthew C Arterburn, Y Tom Tang, Chenghua Liu, Radoje Drmanac filed Critical Hyseq Inc
Priority to JP2001553917A priority Critical patent/JP2004508804A/en
Priority to CA002395749A priority patent/CA2395749A1/en
Priority to EP00989432A priority patent/EP1240178A4/en
Priority to AU25936/01A priority patent/AU783762B2/en
Priority to US10/311,827 priority patent/US20050175994A1/en
Publication of WO2001053456A2 publication Critical patent/WO2001053456A2/en
Publication of WO2001053456A3 publication Critical patent/WO2001053456A3/en
Publication of WO2001053456A8 publication Critical patent/WO2001053456A8/en
Publication of WO2001053456A9 publication Critical patent/WO2001053456A9/en

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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/48Hydrolases (3) acting on peptide bonds (3.4)
    • C12N9/50Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
    • C12N9/64Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
    • C12N9/6421Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
    • C12N9/6424Serine endopeptidases (3.4.21)
    • C12N9/6432Coagulation factor Xa (3.4.21.6)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P13/00Drugs for disorders of the urinary system
    • A61P13/12Drugs for disorders of the urinary system of the kidneys
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P19/00Drugs for skeletal disorders
    • A61P19/02Drugs for skeletal disorders for joint disorders, e.g. arthritis, arthrosis
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P21/00Drugs for disorders of the muscular or neuromuscular system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/14Drugs for disorders of the nervous system for treating abnormal movements, e.g. chorea, dyskinesia
    • A61P25/16Anti-Parkinson drugs
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P25/00Drugs for disorders of the nervous system
    • A61P25/28Drugs for disorders of the nervous system for treating neurodegenerative disorders of the central nervous system, e.g. nootropic agents, cognition enhancers, drugs for treating Alzheimer's disease or other forms of dementia
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P29/00Non-central analgesic, antipyretic or antiinflammatory agents, e.g. antirheumatic agents; Non-steroidal antiinflammatory drugs [NSAID]
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • A61P3/02Nutrients, e.g. vitamins, minerals
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P3/00Drugs for disorders of the metabolism
    • A61P3/08Drugs for disorders of the metabolism for glucose homeostasis
    • A61P3/10Drugs for disorders of the metabolism for glucose homeostasis for hyperglycaemia, e.g. antidiabetics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/04Antibacterial agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P35/00Antineoplastic agents
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
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    • A61P37/00Drugs for immunological or allergic disorders
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/435Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
    • C07K14/705Receptors; Cell surface antigens; Cell surface determinants
    • C07K14/70503Immunoglobulin superfamily
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14Hydrolases (3)
    • C12N9/16Hydrolases (3) acting on ester bonds (3.1)
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12YENZYMES
    • C12Y304/00Hydrolases acting on peptide bonds, i.e. peptidases (3.4)
    • C12Y304/21Serine endopeptidases (3.4.21)
    • C12Y304/21006Coagulation factor Xa (3.4.21.6)
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides

Abstract

The invention provides novel polynucleotides and polypeptides encoded by such polynucleotides and mutants or variants thereof that correspond to a novel secreted prothrombinase-like polypeptide. These polynucleotides comprise nucleic acid sequences isolated from cDNA library from human ovary (Hyseq clone identification numbers 773565 (SEQ ID NO: 1) and 7727065 (SEQ ID NO: 11)). Other aspects of the invention include vectors containing processes for producing novel secreted prothrombinase-like polypeptides, and antibodies specific for such polypeptides.
PCT/US2000/035061 1999-01-20 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides WO2001053456A2 (en)

Priority Applications (5)

Application Number Priority Date Filing Date Title
JP2001553917A JP2004508804A (en) 2000-01-21 2000-12-22 Methods and materials for prothrombinase-like polypeptides and polynucleotides
CA002395749A CA2395749A1 (en) 1999-12-23 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides
EP00989432A EP1240178A4 (en) 1999-12-23 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides.
AU25936/01A AU783762B2 (en) 1999-12-23 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides
US10/311,827 US20050175994A1 (en) 1999-01-20 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides

Applications Claiming Priority (13)

Application Number Priority Date Filing Date Title
US47127599A 1999-12-23 1999-12-23
US09/471,275 1999-12-23
US48872500A 2000-01-21 2000-01-21
US09/488,725 2000-01-21
US49140400A 2000-01-25 2000-01-25
US09/491,404 2000-01-25
US55231700A 2000-04-25 2000-04-25
US09/552,317 2000-04-25
US09/596,196 2000-06-17
US09/596,196 US6586390B1 (en) 2000-01-21 2000-06-17 Methods and materials relating to novel prothrombinase-like polypeptides and polynucleotides
US64331300A 2000-08-31 2000-08-31
US09/653,274 US6635742B1 (en) 2000-01-25 2000-08-31 Antibodies specific for semaphorin-like polypeptides
US09/643,313 2000-08-31

Publications (4)

Publication Number Publication Date
WO2001053456A2 WO2001053456A2 (en) 2001-07-26
WO2001053456A3 true WO2001053456A3 (en) 2002-05-30
WO2001053456A8 WO2001053456A8 (en) 2002-07-04
WO2001053456A9 WO2001053456A9 (en) 2002-12-05

Family

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Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2000/035061 WO2001053456A2 (en) 1999-01-20 2000-12-22 Methods and materials relating to prothrombinase-like polypeptides and polynucleotides

Country Status (4)

Country Link
EP (1) EP1240178A4 (en)
AU (1) AU783762B2 (en)
CA (1) CA2395749A1 (en)
WO (1) WO2001053456A2 (en)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2002224056A1 (en) * 2000-11-22 2002-06-03 Yamanouchi Pharmaceutical Co..Ltd. Novel polypeptide
WO2003027143A2 (en) 2001-09-25 2003-04-03 Japan As Represented By The President Of The University Of Tokyo Gene and protein relating to hepatocellular carcinoma
CA2399569A1 (en) 2001-09-25 2003-03-25 Yusuke Nakamura Diagnostic markers and drug targets for treatment of cancer
US20060182755A1 (en) * 2002-09-11 2006-08-17 Genentech, Inc. Novel composition and methods for the treatment of psoriasis

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001005825A2 (en) * 1999-07-16 2001-01-25 Hyseq, Inc. Nucleic acid sequences encoding putative angiopoietin proteins

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2001005825A2 (en) * 1999-07-16 2001-01-25 Hyseq, Inc. Nucleic acid sequences encoding putative angiopoietin proteins

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
DATABASE GENEMBL [online] COMPUGEN LTD.; BALLINGER ET AL.: "Novel angiopoietin materials and methods", XP002944228, accession no. GenCore Database accession no. AX079973 *
DATABASE GENEMBL [online] COMPUGEN LTD.; March 2000 (2000-03-01), BIRREN ET AL.: "Homo sapiens, clone RP11-21G19, direct submission", XP002944227, accession no. GenCore Database accession no. AC015500 *
GALE ET AL.: "Growth factors acting via endothelial cell-specific receptor tyrosine kinases: VEGFs, angiopoietins and ephrins in vascular development", GENES & DEV., vol. 13, 1999, pages 1055 - 1066, XP002944219 *
LEVY ET AL.: "Molecular and functional analysis of the human prothrombinase gene (HFGL2) and its role in viral hepatitis", AM. J. PATH., vol. 156, no. 4, April 2000 (2000-04-01), pages 1217 - 1225, XP002944220 *
See also references of EP1240178A4 *

Also Published As

Publication number Publication date
EP1240178A2 (en) 2002-09-18
WO2001053456A9 (en) 2002-12-05
WO2001053456A8 (en) 2002-07-04
AU783762B2 (en) 2005-12-01
WO2001053456A2 (en) 2001-07-26
CA2395749A1 (en) 2001-07-26
AU2593601A (en) 2001-07-31
EP1240178A4 (en) 2004-06-30

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