WO2000061179A1 - Domaines kringle du plasminogene capables de moduler l'angiogenese in vivo - Google Patents

Domaines kringle du plasminogene capables de moduler l'angiogenese in vivo Download PDF

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Publication number
WO2000061179A1
WO2000061179A1 PCT/SE2000/000719 SE0000719W WO0061179A1 WO 2000061179 A1 WO2000061179 A1 WO 2000061179A1 SE 0000719 W SE0000719 W SE 0000719W WO 0061179 A1 WO0061179 A1 WO 0061179A1
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inhibitor
protein
amino acid
peptide
acid sequence
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PCT/SE2000/000719
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English (en)
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Yihai Cao
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Karolinska Innovations Ab
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Priority to AU44451/00A priority Critical patent/AU4445100A/en
Publication of WO2000061179A1 publication Critical patent/WO2000061179A1/fr

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
    • C12N9/14—Hydrolases (3)
    • C12N9/48—Hydrolases (3) acting on peptide bonds (3.4)
    • C12N9/50—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25)
    • C12N9/64—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue
    • C12N9/6421—Proteinases, e.g. Endopeptidases (3.4.21-3.4.25) derived from animal tissue from mammals
    • C12N9/6424—Serine endopeptidases (3.4.21)
    • C12N9/6435—Plasmin (3.4.21.7), i.e. fibrinolysin
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Y—ENZYMES
    • C12Y304/00—Hydrolases acting on peptide bonds, i.e. peptidases (3.4)
    • C12Y304/21—Serine endopeptidases (3.4.21)
    • C12Y304/21007—Plasmin (3.4.21.7), i.e. fibrinolysin
    • A—HUMAN NECESSITIES
    • A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00—Medicinal preparations containing peptides
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07K—PEPTIDES
    • C07K2319/00—Fusion polypeptide

Definitions

  • the present invention relates to novel endothelial cell proliferation inhibitors.
  • the inhibitors are extraordinarly potent in inhibiting angiogenesis related diseases and modulating angiogenic processes.
  • the present invention relates to methods of treating a human or animal having an angiogenic disease by administering an inhibitor according to the invention thereto.
  • angiogenesis means the generation of new blood vessels into a tissue or organ, and involves endothelial cell proliferation. Under normal physiological conditions, humans or animals undergo angiogenesis only in very specific restricted situations. For example, angiogenesis is normally observed in wound healing, fetal and embryonal development and formation of the corpus luteum, endometri- um and placenta.
  • endothelium means a thin layer of flat epithelial cells that lines serous cavities, lymph vessels and blood vessels.
  • Endothelial cells and pericytes surrounded by a basement membrane, form capillary blood vessels.
  • Angiogenesis begins with the erosion of the basement membrane by enzymes released by endothelial cells and leukocytes.
  • the endothelial cells which line the lumen of blood vessels, then protrude through the basement membrane.
  • Angiogenic stimulants induce the endothelial cells to migrate through the eroded basement membrane.
  • the migrating cells form a "sprout" off the parent blood vessel, where the endothelial cells undergo mitosis and proliferate.
  • the endothelial sprouts merge with each other to form capillary loops, creating the new blood vessel.
  • Persistent, unregulated angiogenesis occurs in a multiplicity of disease states, tumor metastasis and abnormal growth by endothelial cells and supports the pathological da- mage seen in these conditions.
  • the diverse pathological disease states in which unregulated angiogenesis is present have been grouped together as angiogenic dependent or angiogenesis associated diseases.
  • Tumor growth is angiogenesis-dependent.
  • Tumor angiogenesis Therapeutic implications. N. Engl. Jour. Med. 285: 1182-1186, 1971.
  • Tumor "take” is currently understood to indicate a prevascular phase of tumor growth in which a population of tumor cells occupying a few cubic millimeters volume, and not exceeding a few million cells, can survive on existing host microvessels. Expansion of tumor volume beyond this phase requires the induction of new capillary blood vessels.
  • pulmonary micrometastases in the early prevascular phase in mice would be undetectable except by high power microscopy on histological sections.
  • Tumor growth in the avascular cornea proceeds slowly and at a linear rate, but switches to exponential growth after neovascularization.
  • Tumor growth and neov ascularization An experimental model using the rabbit cornea. J. Natl. Cancer Institute 52:41-427, 1974.
  • Tumors suspended in the aqueous fluid of the anterior chamber of the rabbit eye remain viable, avascular and limited in size to ⁇ 1 mm 3 . Once they are implanted on the iris vascular bed, they become neovascularized and grow rapidly, reaching 16,000 times their original volume within 2 weeks.
  • Gibrone MA Jr., et al. Tumor dormancy in vivo by prevention of neovascularization, J. Exp. Med. 136:261-276).
  • Vascular casts of metastases in the rabbit liver reveal heterogeneity in size of the metastases, but show a relatively uniform cut-off point for the size at which vasculari- zation is present.
  • Tumors are generally avascular up to 1 mm in diameter, but are neovascularized beyond that diameter.
  • pre- vascular hyperplastic islets are limited in size to ⁇ 1 mm 3 .
  • 4- 10% of the islets become neovascularized, and from these islets arise large vascularized tumors of more than 1000 times the volume of the pre- vascular islets.
  • VEGF vascular endothelial growth factor
  • Anti-bFGF monoclonal antibody causes 70% inhibition of growth of a mouse tumor which is dependent upon secretion of bFGF as its only mediator of angiogenesis. The antibody does not inhibit growth of the tumor cells in vitro. (Hori A, et al., Suppression of solid tumor growth by immunoneutralizing monoclonal antibody against human basic fibroblast growth factor. Cancer Research, 51 :6180-6184, 1991).
  • bFGF Intraperitoneal injection of bFGF enhances growth of a primary tumor and its metastases by stimulating growth of capillary endothelial cells in the tumor.
  • the tumor cells themselves lack receptors for bFGF, and bFGF is not a mitogen for the tumor cells in vitro.
  • a specific angiogenesis inhibitor (AGM-1470) inhibits tumor growth and metastases in vivo, but is much less active in inhibiting tumor cell proliferation in vitro. It inhibits vascular endothelial cell proliferation half-maximally at 4 logs lower concentration than it inhibits tumor cell proliferation.
  • AGM-1470 A specific angiogenesis inhibitor
  • Carcinoma of the ovary metastasizes to the peritoneal membrane as tiny avascular white seeds (1-3 mm 3 ). These implants rarely grow larger until one or more of them becomes neovascularized.
  • angiogenesis plays a major role in the metastasis of a cancer. If this angiogenic activity could be repressed or eliminated, or otherwise controlled and modulated, then the tumor, although present, would not grow. In the disease state, prevention of angiogenesis could avert the damage caused by the invasion of the new mic- rovascular system. Therapies directed at control of the angiogenic processes could lead to the abrogation or mitigation of these diseases.
  • compositions and methods by which endothelial cell proliferation, such as the unwanted growth of blood vessels, especially into tumors, may be inhibited there is also a need for methods for detecting, measuring and localizing such compositions.
  • Such compositions should be able to overcome the activity of endogenous growth factors in premetastatic tumors and prevent the formation of the capillaries in the tumors, thereby inhibiting growth of the tumors.
  • the compositions, fragments of such compositions and antibodies specific to said compositions should be able to modulate the formation of capillaries in other angiogenic processes, such as wound healing and reproduction.
  • compositions and methods for inhibiting angiogenesis should preferably be non-toxic and produce few side effects.
  • compositions and fragments of the compositions should be capable of being conjugated to other molecules for both radioactive and non-radioactive labeling pu ⁇ oses.
  • angiostatin plasminogen
  • active agent in a composition for the above defined purposes; see US 5,639,725 inco ⁇ orated herein by reference.
  • angiostatin used as a medicament for human patients, angiostatin would have to be administered in kilograms to be effective, which of course would put severe limitations to the use thereof due to practical reasons.
  • Another drawback lies in the amounts which would be necessary to produce due to said low effect, making such a product quite costly.
  • the object of the present invention is to fulfil the above defined need. This is accomplished by the present invention, which relates to a protein and to protein and peptide containing compositions capable of modulating or regulating, e.g. inhibiting, the endothelial cell proliferation in in vitro and angiogenesis in in vivo assays.
  • the invention also relates to any nucleic acid encoding such novel protein or combination.
  • the invention is particularly distinguished from the prior art in that the inventor has determined that by use of one or more of the angiostatin associated Kringles 1 to Kringle 3, or angiogenically active peptide fragments thereof, in association with Kringle 5 or its active peptide fragments or conjugates, it becomes possible to provide anti-angiogenesis treatment using far smaller quantities of agent than possible when using angiostatin or Kringle 5 type agents alone, rendering such treatment a more practical proposition.
  • the inventor has particularly determined that angiostatin like agents and Kringle 5 like agents appear to exert their effect through separate pathways thus providing enhanced efficacy, ie. significant synergy, when used together in the same treatment, with a single agent inco ⁇ orating a Kringle selected from Kringles 1 , 2 and 3, or an active peptide fragment thereof, together with a Kringle 5 type component being preferred.
  • Kl Kringle 1
  • K5 Kringle 5
  • the present invention is distinguished from that of the prior art in that it requires the presence of Kl, K2 and/or K3, or active peptide fragments thereof, together with K5 or an active peptide fragment thereof, with result of a su ⁇ risingly potent anti- angiogenic activity.
  • Figure 1 A and B show a proteolytic human kringle 1-5 (Kl-5) fragment; schematically (A) and purified on a gel (B).
  • Figure 2 show the anti-endothelial cell proliferation activity of Kl-5 at low concentrations (A) and at high concentrations (B), while 2 C-D show the inhibition of capillary endothelial cell proliferation.
  • FIG 3 A-D shows the mo ⁇ hology of K 1-5 treated endothelial cells with bFGF alone (A); bFGF + Kl-5 (lOng/ml) (B); bFGF + Kl-5 (lOOng/ml) (C); and bFGF + Kl-5 (500ng/ml (D).
  • Figure 4 shows the synergistic suppression of endothelial cell growth by angiostatin (Kl-4) and K5.
  • Figure 5 A-C shows the anti-angiogenic effect of K 1-5 according to the invention on the chick embryo chorioallantoic membrane (CAM).
  • Figure 6 shows suppression of primary tumor growth by K 1-5 according to the invention, comparing mice treated with K l-5 with saline treated mice (A) and showing tumor volume with time (B).
  • Figure 7 A-D shows detection of microvessel density by immunohistochemical staining of tumor tissue sections with anti-vWF antibodies.
  • Figure 8 shows the synergistic effect of Kl and K5 and Kl-3 and K5 on endothelial cell growth.
  • a composition comprising one or more proteins or peptides which individually or together comprise (a) an amino acid sequence corresponding to that of one or more of Kringles 1 , 2 and 3 of a mammalian plasminogen or anti-angiogenically active peptide framents or protected derivatives thereof and (b) an amino acid sequence corresponding to that of a peptide or protein selected from the group consisting of a mammalian plasminogen Kringle 5, its fusion proteins or anti-angiogenically active peptide fragments or protected derivatives thereof wherein the total molecular weight of the protein and/or peptides (a) + (b) is no more than 50- 75kDa, such as 50-70kDa, preferably 50-65kDa, as defined by reducing polyacrylami- de gel electrophoresis.
  • composition comprises only two Kringle (herein K) amino acid sequences, or comprises peptide fragments
  • the total molecular weight will be less than 40kDa, more preferably less than 30kDa, still more preferably less than 25kDa.
  • molecular weights have been determined by glycosylation of the protein.
  • Kringle 1 -5 When Kringle 1 -5 are glycosylated, the molecular weight will be increased, and it is known that Kl-5 contains at least one glycosylation site at Asn308. Further, under reducing conditions, the molecular weight of Kl-5 will also be increased. Both glycosylation and reduction can be incomplete under the physiological conditions and electrophoresis conditions.
  • the same protein can be present in two or more molecular weights, and even though 50-70kDa is mentioned above, under certain conditions, the molecular weight may be as high as 50-75 kDa.
  • the protein or active peptide fragment of amino acid sequence corresponding to that of one or more of Kl, K2 and K3 of a mammalian plasminogen consists of a protein corresponding to the amino acid sequence of a mammalian plasminogen fragment Kl, K2, K3, Kl-2, Kl-3, K2-3, Kl-4, K2-4 or K3-4 and is of 45KDa or less as determined by reducing polyacrylamide gel electrophoresis.
  • Kl-4 may be used as the component (a) as disclosed in US 5,639,725 is which inco ⁇ orated herein by reference.
  • Kl, K2 or K3 or their active peptide fragments will be preferred.
  • this protein does not comprise Kringle 4.
  • the individual kringles and cDNAs encoding therefor may be provided by conventional means, eg. by methods described in Journal of Biological Chemistry 1996, Vol 271, No 46, Kringle Domains of Human Angiosatin, which is inco ⁇ orated herein by reference.
  • the individual kringle domains have been described, e.g. in Cao, Y., Ji, R., Davidson, D., Schaller, J., Marti, D., S ⁇ hndel, S., McCane, S., O'Reilly, M., Llinas, M., and Folkman, J., in J. Biol. Chem. 271, 29461-29467, 1996.
  • the peptide or protein having amino acid sequence corresponding to that of a mammalian plasminogen Kringle 5, its fusion proteins or an anti- angiogenically active peptide fragment or protected derivative thereof is selected from the group of molecules comprising the amino acid sequence of mammalian plasminogen Kringle 5 Arg530 to Tyr534 and molecules comprising the amino acid se- quence of mammalian plasminogen Kringle 5 Prol 50 to Tyr 156.
  • Suitable peptides are disclosed in US 5,854,221 and WO 97/41824, derived from US Serial No 08/643,219 of 3rd May 1996 which are inco ⁇ orated herein by reference.
  • the peptide or protein having amino acid sequence corresponding to that of a mammalian plasminogen Kringle 5, its fusion proteins or anti- angiogenically active peptide fragments or protected derivatives thereof is selected from the group of molecules comprising the amino acid sequence of mammalian plasminogen Kringle 5 Val454 to Ala543.
  • composition comprises only one (a single) anti-angiogenically active protein and that comprises an amino acid sequence corresponding to that of one or more of mammalian Kringles 1 , 2 and 3 together with that of Kringle 5 in the same sequence.
  • anti-angiogenically active peptide fragments of the selected Kringles may be substituted therefor in such single agent.
  • the protein comprises plasminogen fragment K 1-3 joined to and Kringle 5 directly or by a spacer amino acid sequence.
  • a spacer may be any sequence that the skilled in this field would consider suitable, e.g. in order to facilitate the preparation, and may be a short peptide, a polypeptide etc.
  • the spacer is not intended to have any impact on the efficiency of the present composition, unless it improves the function by keeping said kringles apart in order to eliminate any possible undesired interaction between the two.
  • the protein comprises a spacer sequence corresponding to that of a mammalian Kringle 4.
  • any one of the kringle domains of the composition according to the invention may also or alternatively be kept suitably apart by use of spacers.
  • a composition comprising a single active protein, which comprises one of Kl , K2 and K3 fused together with K5 is preferred.
  • spacer see e.g. Cao, Y., Ji, R., Davidson, D., Schaller, J., Marti, D., S ⁇ hndel, S., McCane, S., O'Reilly, M., Llinas, M., and Folkman, J., in /. Biol. Chem. 271, 29461-29467, 1996.
  • composition includes an anti-angiogenically active protein comprising an amino acid sequence corresponding to that of a mammalian plasminogen Kringles 1 to 5 Lys78 to Arg529 .
  • a protected derivative is meant an N- and/or C-terminal protected protein or peptide, the protection being provided by conventional N- or C- terminal protecting groups, for example, such as acyl groups at the N-terminal and amide groups at the C-terminal, eg acetyl and amido respectively.
  • compositions which are pharmaceutical or veterinary compositions which are compositions of the invention which include one or more pharmaceutically acceptable carriers and/or excipients.
  • the composition may be administered in a variety of unit dosage forms depending upon the method of administration,e.g parenteral, topical, oral or local administration, for prophylactic and/or therapeutic treatment.
  • unit dosage forms suitable for oral administration include powder, tablets, pills, capsules and lozenges.
  • carriers such as aqueous carriers, e.g. buffered saline etc. These solutions are free of undesirable matter.
  • compositions may also include pharmaceutically acceptable auxiliary substances as required to approximate physiological conditions, such as pH adjusting and buffering agents, toxicity adjusting agents and the like, e.g. sodium acetate, sodium chloride, potassium chloride, calcium chloride etc.
  • auxiliary substances e.g. sodium acetate, sodium chloride, potassium chloride, calcium chloride etc.
  • a composition, or preparation, according to the present invention may be administered in a much lower dosage and the use thereof is thus superior to that of known angiostatin compositions.
  • the composition comprises a molecule or protein, which is capable of inhibiting cancer metastases.
  • the half maximal concentration (EC50) of the agents, ie molecules according to the present invention for the inhibition of endothelial cell proliferation is typically about 50 pM, to be compared with the EC50 value for angiostatin, which is 130 nM.
  • the present inventors have now shown that not only did the previously beleived inactive kringle 5 of plasminogen show effect, but, also, that the new molecule may also include the kringle 4, which has been known to lower the effect of the other angiostatin fragments.
  • the molecule according to the invention is also more stable in the human or animal body than the prior art compounds, probably due to a higher resistence against proteases and other enzymes present. In other words, it exhibits a longer half-time, which is advantageous as it enables a less frequent administration, as well as lower amounts.
  • a Kl-5 or a K1K5 fusion protein preparation according to the present invention is more convenient for the patient treated therewith and also less costly than the angiostatin or K5 compounds of the prior art.
  • the present invention relates to isolated proteins and peptides corresponding in sequence to fusions of Kl , K2, K3, Kl-2, Kl-3, Kl-4, K2-3, K2-4, K3-4 or active peptide fragments thereof with K5 or an active peptide fragment thereof as described for inclusion in the compositions of the invention, these being capable of modulating endothelial cell proliferation in vitro and angiogenesis in vivo.
  • Kl-5 type molecules these will have an amino acid comprising at least about 50% of the sequence disclosed in SEQ ID NO. 1 or SEQ ID NO. 2 or an analogue thereof.
  • the fusion protein may have K5 at its N-terminal end or at its C- terminal end with respect to the other kringle sequence component and still retain anti- angeogenic activity.
  • the K5 will be C-terminal to the other kringle component.
  • the protein according to the second aspect of the invention is comprised of at least about 50% of the amino acid sequence which the human kringle 1-5 sequence as disclosed in SEQ ID NO. 1 and the mouse kringle 1-5 as disclosed in SEQ ID NO. 2 has in common.
  • the protein according to the invention comprises about 60-70% of the amino acid sequence which SEQ ID NO 1 an 2 has in common and more specifically essentially all of that sequence.
  • the protein according to the invention is comprised of essential parts the human amino acid sequence and in an alternative embodiment, the protein according to the invention is comprised of essentially all of the mouse amino acid sequence.
  • the protein according to the invention has a molecular weight of between about 50 to about 65 kilodaltons, as determined by non-reducing polyacrylamide gel electrophoresis. The molecular weight depends inter alia on whether the molecule has been glycosylated or not, which in turn depends on how it has been produced.
  • the molecule according to the invention exhibits an amino acid sequence which is substantially similar to that of a plasminogen fragment comprised of Lys 78-Arg 530 of a plasminogen molecule.
  • the sequence which the present molecule resembles may start with Lys 77 or Lys 78 and, correspondingly, it may end with Arg 529 or Arg 530.
  • a preferred embodiment of the invention is a molecule, which more specifically has a molecular weight of about 50 to about 60 kilodalton, preferably about 53 to about 57 kilodalton and most preferred about 55 kilodalton.
  • Kl-5 comprises the first five kringle domains of plasminogen. Even though the fifth domain indeed has been known to exist before, the general opinion of the experts within this field has been that kringle no. 5 has not contributed to, or shared, the angiogenic properties of angiostatin. Thus, a fragment consisting of all the regions 1-5 of plasminogen has never been tested in total before as regards the inhibition of the growth of endothelial cells.
  • the present inventor has now been able to disclose extremely promising results for such new fragments, or molecules exhibiting sequences substantially similar to such fragments, which compared to the prior angiostatin compositions quite su ⁇ risingly are superior in the present context.
  • the molecule according to the invention is also more preferred than the prior angiostatin compounds, since the present molecule is larger. Consequently, the present molecule is more stable and therefore more favourable for use as a medicament and in medicinal compositions.
  • the present invention relates to a molecule as defined above, wherein the plasminogen fragment is similar to a fragment selected from the group consisting of human plasminogen, murine plasminogen, bovine plasminogen, Rhesus plasminogen and porcine plasminogen.
  • the molecule, or protein, according to the present is capable of inhibiting endothelial cell proliferation in in vitro assays.
  • composition or molecule according to the invention such as a two kringle K1K5 fusion protein, for use as a medicament.
  • the invention also relates to the use of a composition according to the invention as defined above for the manufacture of a medicament for modulating, e.g. inhibiting, endothelial cell proliferation, for example for treating angiogenesis associated conditions or diseases, such as tumor growth, e.g. cancer, diabetes etc.
  • Another object of the present invention is a nucleic acid, such as a DNA or RNA, encoding a peptide, polypeptide or protein molecule according to the invention.
  • a cDNA sequence which is complementary to such a sequence is also encompassed.
  • further object of the invention is any nucleic acid which under stringent conditions hybridizes specifically to one of the above defined nucleic acids.
  • the term hybridising specifically to refers to the binding, duplexing or hybridizing of a molecule only to a particular nucleotide sequence under stringent conditions when that sequence is present in a complex mixture of DNA or RNA.
  • stringent conditions refers to conditions, under which a probe will hybridize to its target sequence, but to no other sequences. Stringent conditions are sequence-dependent and will be different in different circumstances. The one skilled in this field will easily choose the suitable conditions in the present context. Generally, stringent conditions are selected to be about 5°C lower than the thermal melting point (Tm) for the specific sequence at a defined ionic strength and pH.
  • stringent conditions will be those in which the salt concentration is less than about 1.0 M Na ion, such as about 0.01-1.0 M, at a pH of about 7.0-8.3 and the temperature is between about 30°C and 60°C, depending on the length of the nucleoti- de.
  • Stringent conditions may also be achieved by the addition of destabilizing agents, such as formamide.
  • destabilizing agents such as formamide.
  • Such a nucleotide according to the invention may be of any length in accordance with the above defined.
  • standard stringency conditions are 2 x SSC and high stringency conditions as 1 x SSC (see Church and Gilbert, Proc Nat Acad Sci USA (1984) 81, 1991-1995 inco ⁇ orated herein by reference).
  • the nucleic acids according to the invention are cloned or amplified by in vitro methods, such as polymerase chain reaction (PCR), the ligase chain reaction (LCR), the transcription-based amplification system (TAS), etc.
  • PCR polymerase chain reaction
  • LCR ligase chain reaction
  • TAS transcription-based amplification system
  • a wide variety of cloning and in vitro amplification methods are well known to persons of skill, see e.g. Berger and Kimmel, Guide to Molecular Cloning Techniques, Methods in Enzymology 152 Academic Press, Inc., San Diego, CA (Berger); Sambrook et al., (1989) Molecular Cloning - A Laboratory Manual, vol 1-3, Cold Spring Harbor Laboratory, Cold Spring Harbor Press, NY; Current Protocols in Molecular Biology, F.M. Ausbel et al., eds., Current Protocols; Cashion et al., US patent no. 5 017 478; and Carr, EP patent
  • an antibody raised against a peptide, polypeptide or protein is an antibody raised against a peptide, polypeptide or protein according to the invention.
  • an immunogen preferably a purified polypeptide, a polypeptide coupled to an appropriate carrier (e.g. GST, keyhole limpet hemanocyanin etc.), or a polypeptide inco ⁇ orated into an immunization vector such as a recombinant vaccinia virus (see US patent no. 4 722 848) is mixed with an adjuvant and animals are immunized with the mixture.
  • the animal's immune response to the immunogen preparation is monitored by taking test bleeds and determining the titer of the reactivity to the polypeptide of interest.
  • blood is collected from the animal and antisera are prepared. Further fractionation of the antisera to enrich for antibodies reactive to the polypeptide is performed where desired (see. e.g. Coligan (1991) Current Protocols in Immunology, Wiley /Greene, NY; and Harlow and Lane (1989) Anti- bodies: A laboratory manual, Cold Spring Harbor Press, NY).
  • An additional object is the use of a molecule as defined above, eg. a cDNA, in gene therapy as well as such gene therapy methods.
  • the methods according to the invention can involve transfecting cells of a mammal with a vector expressing a polypeptide or antibody according to the invention. The transfection can be in vivo or ex vivo. Ex vivo transfection is suitably followed by re-infusing the cells into the organism. Other methods involve administering to the mammal, e.g. a human, of a therapeutically effective dose of a composition comprising a polypeptide according to the invention and a pharmacological excipient and/or carrier.
  • One further object of the present invention is to provide a method of treating diseases and processes that are mediated by endothelial cell proliferation, especially angiogenesis.
  • One such disease which may be treated is cancer.
  • this aspect of the invention particularly includes a method of treating a patient in need of anti-angiogenic therapy comprising administering to that patient an effective dose of one or more proteins or peptides which individually or together comprise (a) an amino acid sequence corresponding to that of one or more of Kringles 1 , 2 and 3 of a mammalian plasminogen or anti-angiogenically active peptide fragments or protected derivatives thereof and (b) an amino acid sequence corresponding to that of peptides and proteins selected from the group consisting of a mammalian plasminogen Kringle 5, its fusion proteins or anti-angiogenically active peptide fragments or protected derivatives thereof wherein the total molecular weight of the administered protein and/or peptides (a) + (b) is no more than 50-70kDa, preferably 50-65kDa, as defined by reducing polyacrylamide gel electrophoresis.
  • Preferred molecular weights are as described for the components of the compositions of the invention above.
  • Preferred sequences correspond to the respective part of the human plasminogen sequence.
  • the protein of amino acid sequence corresponding to one or more of Kl , K2 and K3 of a mammalian plasminogen consists of a protein corresponding to the amino acid sequence of a mammalian plasminogen fragment stated to be a preferred form of the composition of the invention and is of 45KDa or less as determined by reducing polyacrylamide gel electrophoresis.
  • amino acid sequence (b) corresponding to that of a mammalian plasminogen Kringle 5, its fusion proteins or an anti-angiogenically active peptide fragment or protected derivative thereof is selected from the group of molecules comprising the amino acid sequence corresponding to that of mammalian plasminogen Kringle 5 Arg530 to Tyr534 and molecules comprising the amino acid sequence of mammalian plasminogen Kringle 5 Prol50 to Tyr 156.
  • the peptide or protein having amino acid sequence corresponding to that of a mammalian plasminogen Kringle 5, its fusion proteins or anti- angiogenically active peptide fragments or protected derivatives thereof is selected from the group of molecules comprising the amino acid sequence of mammalian plasminogen Kringle 5 Val454 to Ala543.
  • More preferably only one anti-angiogenically active protein is administered and it comprises an amino acid sequence corresponding to that of mammalian K 1 , 2 or 3, more preferably Kl , together with that of K 5 in the same sequence.
  • Kl, K2 or K3 sequence is fused directly to the K5 sequence and most preferably in the order NH2-K1-K5-C02H, NH2-K1-2-K5-C02H and NH2-K1-3K5-C02H.
  • the protein comprises Kringle 1, 2 or 3 and Kringle 5 joined together by a spacer amino acid sequence and more conveniently the spacer sequence conesponds to that of a mammalian Kringle 4.
  • the anti-angiogenically active protein comprises an amino acid sequence corresponding to that of a mammalian plasminogen Kringles 1 to 5 Lys78 to Arg529 .
  • the invention particularly relates to a method of treating a human or animal with an angiogenic disease comprising administering, to said human or animal, a molecule or protein having a molecular weight of approximately 50 - 65 kilodaltons as determined by non-reducing polyacrylamide gel electrophoresis and having an amino acid sequence substantially similar to that of a plasminogen fragment comprised of Lys 78-Arg 530 of a plasminogen molecule.
  • the protein has a molecular weight of approximately 50 - 60 kilodaltons, preferably 53 -57 kilodalton and most preferred approximately 55 kilodalton.
  • the method according to the invention may use a molecule substantially similar to a plasminogen fragment, which is selected from the group consisting of human plasminogen, murine plasminogen, bovine plasminogen, Rhesus plasminogen and porcine plasminogen.
  • a plasminogen fragment which is selected from the group consisting of human plasminogen, murine plasminogen, bovine plasminogen, Rhesus plasminogen and porcine plasminogen.
  • the present invention encompasses protein molecules which are analogues of kringle 1-5 of plasminogen as well as methods of use thereof.
  • the new part which has been added to the previously known angiostatin molecule is accordingly kringle no 5 of plasminogen, which is separately described in detail below.
  • the present invention also encompasses diagnostic and therapeutic methods for detecting the presence or absence of the inhibiting peptide in body fluids, and for administration of the peptide or antibodies that specifically bind the peptide to patients in need of therapeucically effective amounts of such compounds to regulate endothelial cell proliferation.
  • the inhibitory peptide may be used in conjunction with in vitro proliferating endothelial cell cultures to test for compounds that mitigate the inhibitory effects of the peptide - i.e. to screen for growth factors or other compounds capable of overcoming or reversing the inhibition of endothelial cell proliferation.
  • another aspect of the invention is a screening assay, wherein a nucleic acid, a protein, a peptide or a polypeptide according to the invention is used.
  • a screening assay wherein a nucleic acid, a protein, a peptide or a polypeptide according to the invention is used.
  • the immunoassays may be competitive or non- competitive.
  • the present invention also encompasses screening assays aimed at the detection of molecules useful as alternatives to Kl-5, which exhibits the same function but are more desirable e-g- due to a smaller molecular weight.
  • the methods according to the invention are aimed at the detection of peptide or polypeptides, or even proteins, that bind to the same target as Kl-5 and therefore exhibit an equivalent therapeutic effect.
  • the peptides or polypeptides, or even proteins detected by the method of the invention are also within the scope of the invention and thus, a further aspect of the invention is any peptide, polypeptide, or protein that acts in the same manner or binds to the same receptors as Kl-5 as defined by the invention, preferably by SEQ ID NO. 1 and SEQ ID NO 2.
  • Such same manner particularly means that it acts via two or more anti-angiogenic mechanisms such as to have an enhanced efficacy at least equal to that of Kl-5 weight by weight of dose administered.
  • Still another object of the present invention is to provide a diagnostic or prognostic method, or assay, and kit for detecting the presence and/or amount of the inhibitor in biological fluid samples, such as a body fluid or tissue.
  • the invention also relates to to histochemical kits for localization of the inhibitor defined herein.
  • Another object of the invention is to provide molecular probes to monitor inhibitor biosynthesis and degradation, antibodies that are specific for the inhibitor according to the invention, the development of peptide agonists and antagonists to said inhibitor's receptor, anti-inhibitor receptor-specific antibody agonists and antagonists, and to cytotoxic agents linked to the inhibitor.
  • Another object of the present invention is to provide a method for targeted delivery of inhibitor-related compositions to specific locations.
  • Yet another object of the invention is to provide compositions and methods useful for gene therapy for the modulation of endothelial cell proliferation, such as angiogenic processes.
  • Kringle 1-5 fragment of human plasminogen was obtained by digestion of Glul plasminogen with urokinase-activated plasmin. The cleavage sites of plasmin is located between the double positively charged Lys76 (77) and Lys77 (78) at the N- terminus, and Arg529 (530) and Lys530 (531) and the C-terminus.
  • the Kl-5 fragment containing the region between Lys77-Arg529 was purified by lysine-Sepharose chromatography followed by a Sephadex G-75 column.
  • B the purified Kl-5 was analyzed on a 10-15%o SDS gradient polyacrylamide gel. The molecular standards in kilodaltons are indicated on the left.
  • Kl-5 purified from the plasmin digestion of human plasminogen was assayed on bovine cappilary endothelial (BCE) cells in the presence of 1 ng/ml bFGF in a 72-h proliferation assay as described previously (Cao et al., J. Biol. Chem 271,29461-29467, 1996; Cao et al., J. Biol. Chem. 272, in press, 1997).
  • the inhibitory activity of Kl-5 on BSE cells was tested at low concentrations (0.2-10 nM) and (B) at high concentration (20 nM-320 nM).
  • Fig. 4 Synergistic suppression of endopthelial cell growth by angiostatin and K5 Pure human angiostatin (Kl-4) and Kringle 5 (K5) were obtained as proteolytic fragments. These two endothelial cell inhibitors were added either separately or together to bovine capillary endothelial (BCE) cells stimulated by 1 ng/ml basic fibroblast growth factor (bFGF). At the concentration of 1 nM, angiostatin did not exhibit endothelial cell inhibition. Kringle 5 inhibited endothelial cell proliferation by approximately 50%. When angiostatin and K5 were added together to BCE cells, approximately 95% suppression of cell growth was detected, indicating that both fragments sy- nergistically inhibit endothelial cell proliferation.
  • BCE bovine capillary endothelial
  • bFGF basic fibroblast growth factor
  • Methylcellulose disk containing various doses of Kl-5 was implanted on CAMs of day
  • T241 fibrosarcoma tumor murine T241 fibrosarcoma tumor cells were subcutaneously implanted into each 6-week old C57B16/J mouse.
  • the mice were systemically treated with lOO ⁇ l PBS or 2.5 mg/kg/day Kl-5 in lOO ⁇ l PBS once daily.
  • A Kl-5-treated mice and a control mouse were photographed at day 20 of treatment.
  • B Tumor volumes were measured with a digital calipper and calculated according to a standard formula with x with x length x 0.52. The data represent average mean values (+SEM).
  • A A control tumor section treated with PBS.
  • B and (C) Kl-5-treated tumor sections.
  • D Quantification of microvessels of tumor tissue sections per high field.
  • FIG. 8 Synergistic suppression of endopthelial cell growth by Kl and K5 and Kl-3 and K5
  • Kringle 1, Kringle 1-3 and Kringle 5 were obtained as proteolytic fragments. These endothelial cell inhibitors were added either separately or together to bovine capillary endothelial (BCE) cells stimulated by 1 ng/ml basic fibroblast growth factor (bFGF). At the concentration of 1 nM, Kl did not exhibit any significant endothelial cell inhibition. Kringle 1-3 inhibited endothelial cell proliferation by approximately 30% and Kringle 5 by 50%. Use of Kringle 1 or Kringle 1-3 together with Kringle 5 in each case gave at least 100% inhibition of FGF-2 stimulated angiogenesis and results suggest inhibition basal level angiogenesis.
  • BCE bovine capillary endothelial
  • bFGF basic fibroblast growth factor
  • compositions and methods are provided that are effective for inhibiting endothelial cell proliferation, modulating angiogenesis, and inhibiting unwanted angiogenesis, especially angiogenesis related to tumor growth.
  • the present invention includes e.g. compositions comprising an approximately 452 amino acid sequence derivable from human plasminogen as kringles 1-5.
  • the amino acid sequence of the inhibitor may vary slightly between species.
  • the number of amino acids in the active inhibitor molecule may vary and that all closely homologous amino acid sequences that have endothelial inhibiting activity are contemplated as being included in the present invention.
  • the present invention particularly provides methods and compositions for treating diseases and processes mediated by undesired and uncontrolled epithelial cell proliferation, such as angiogenesis, by administering to a human or animal having undesired endothelial cell proliferation a composition comprising approximately kringle 1-5 of human plasminogen capable of inhibiting endothelial cell proliferation in in vitro assays.
  • the isolated protein is at least approximately 80%o pure, more desirably at least approximately 90% pure and even more desirable at least approximately 95% pure.
  • the present invention is particularly useful for treating, or for repressing the growth of, tumors.
  • Administration of the inhibitor to a human or animal with preva- scularized metastasized tumors helps prevent the growth or expansion of those tumors.
  • the present invention also encompasses DNA sequences encoding the endothelial cell proliferation inhibitors, expression vectors containing DNA sequences encoding the endothelial cell proliferation inhibitors eg such as viral vectors, and cells containing one or more expression vectors containing DNA sequences encoding the inhibitors.
  • the present invention further encompasses gene therapy methods whereby DNA sequences encoding the endothelial cell proliferation inhibitors are introduced into a patient to modify in vivo inhibitor levels.
  • a single sequence or a single vector comprising one or more sequences may encode the separate angiostatin like and K5 like activity mediating agents or the fusion protein or peptides described above for use in the composition of the invention.
  • the present invention also includes diagnostic methods and kits for detection and measurement of the endothelial cell proliferation inhibitor in biological fluids and tissues, and for localization of the inhibitor in tissues and cells.
  • the diagnostic method and kit can be in any configuration well known to those of ordinary skill in the art.
  • the present invention also includes antibodies specific for the endothelial cell proliferation inhibitor and portions thereof, and antibodies that inhibit the binding of antibodies specific for the endothelial cell proliferation inhibitor. These antibodies can be polyclonal antibodies or monoclonal antibodies.
  • the antibodies specific for the endothelial cell proliferation inhibitor can be used in diagnostic kits to detect the presence and quantity of the inhibitor which is diagnostic or prognostic for the occurrence or recunence of cancer or other disease mediated by angiogenesis.
  • Antibodies specific for the endothelial cell proliferation inhibitor may also be administered to a human or animal to passively immunize said human or animal against the inhibitor, thereby reducing angiogenic inhibition.
  • the present invention also includes diagnostic methods and kits for detecting the presence and quantity of antibodies that bind the endothelial cell proliferation inhibitor in body fluids.
  • the diagnostic method and kit can be in any configuration well known to those of ordinary skill in the art.
  • the present invention also includes anti-inhibitor receptor-specific antibodies that bind to the inhibitor's receptor and transmit the appropriate signal to the cell and act as agonists or antagonists.
  • the present invention also includes inhibitor peptide fragments and analogs that can be labeled isotopically or with other molecules or proteins for use in the detection and visualization of the inhibitor binding sites with techniques, including, but not limited to, positron emission tomography, autoradiography, flow cytometry, radioreceptor binding assays, and immunohistochemistry.
  • inhibitor peptides and analogs also act as agonists and antagonists at the inhibitor receptor, thereby enhancing or blocking the biological activity of the endothelial cell proliferation inhibitor.
  • Such peptides are used in the isolation of the receptor molecules capable or specifically binding to the inhibitor.
  • the present invention also includes the endothelial cell proliferation inhibitor, inhibitor fragments, antisera specific for the inhibitor, and inhibitor receptor agonists and receptor antagonists linked to cytotoxic agents for therapeutic and research applications.
  • inhibitors, fragments thereof, antisera specific therefore, inhibitor receptor agonists and inhibitor receptor antagonists are combined with pharmaceutically acceptable excipients, and optionally sustained-release compounds or compositions, such as biodegradable polymers and matrices, to form therapeutic compositions.
  • the present invention includes molecular probes for the ribonucleic acid and deoxyri- bonucleic acid involved in transcription and translation of the endothelial cell proliferation inhibitor. These molecular probes are useful for detecting and measuring inhibitor biosynthesis in tissues and cells.
  • the inhibitors may be isolated from plasminogens, such as human plasminogen, or synthesized by chemical or biological methods (e.g. cell culture, recombinant gene expression, peptide synthesis and in vitro enzymatic catalysis of plasminogen or plasmin to yield active inhibitor).
  • Recombinant techniques include gene amplification from DNA sources using the polymerase chain reaction (PCR), and gene amplification from RNA sources using reverse transcriptase/PCR.
  • the present invention also encompasses a composition comprising a vector containing a DNA sequence encoding the endothelial cell proliferation inhibitor, wherein the vector is capable of expressing the inhibitor or synergistic inhibitors when present in a cell, a composition comprising a cell containing a vector, wherein the vector contains a DNA sequence encoding the inhibitor fragments or analogs thereof, and wherein the vector is capable of expressing the inhibitor when present in the cell, and a method comprising implanting into a human or non-human animal a cell containing a vector, wherein the vector contains a DNA sequence encoding the inhibitor, wherein the vector is capable of expressing the inhibitor when present in the cell.
  • the term "substantially similar” or “substantially homologous” when used in reference to the inhibitor amino acid and nucleic acid sequences means an amino acid sequence having endothelial cell proliferation inhibiting activity and and having a similar molecular weight eg. of approximately 55kDa for Kl-5, which also has a high degree of sequence homology to the protein having the specific N-terminal amino acid sequence disclosed herein, or a nucleic acid sequence that codes for an en- dothelial cell proliferation inhibitor having a molecular weight of approximately 55kDa and a high degree of homology to the having the specific N-terminal amino acid sequence disclosed herein.
  • a high degree of homology means at least approximately 80% amino acid homology, desirably at least approximately 90% amino acid homology, and more desirably at least approximately 95% amino acid homology; more preferably having such percentages of identity.
  • endothelial inhibiting activity means the capabilitv of a molecule to inhibit angiogenesis in general and, for example, to inhibit the growth of bovine capillary endothelial cells in culture in the presence of fibroblast growth factor.
  • Such homology can be readily determined by use of one of the commercially or otherwise publicly available software packages. Algorithms and software suitable for use in aligning sequences for comparison and calculation of sequence homology or identity will be known to those skilled in the art. Significant examples of such tools are the Pearson and Lipman search based FAST and BLAST programs. Details of these may be found in Altschul et al (1990), J. Mol. Biol. 215: 403-10; Lipman D J and Pearson W R (1985) Science 227, ⁇ l435-41. Publically available details of BLAST may be found on the internet at aehttpJ/www.ncbi. nlm.nih.gov/BLAST/blast-help. htmLE.
  • homology and identity percentages can be ascertained using commercially or publicly available software packages inco ⁇ orating, for example, FASTA and BLASTn software or by computer servers on the internet.
  • An example of the former is the GCG Wisconsin Software package while both Genbank (see http://www.ncbi.nlm.nih.gov/BLAST) and EMBL: (see http://www.embl- heidelberg.de/Blast2) offer internet services. Default settings are conveniently used.
  • the sequence are aligned by using 10 or less gaps, ie. the total number of gaps introduced into the two sequences when added together is 10 or less.
  • the length of such gaps is not of particular importance as long as the anti-angiogenic activity is retained but generally will be no more than 10, and preferably no more than 5 amino acids, or 30 and preferably no more than 15 bases.
  • Prefened parameters for BLAST searches are the default values, ie. for EMBL Advanced Blast2: Blastp Matrix BLOSUMS, Filter default, Echofilter X, Expect 10, Cutoff default, Strand both, Descriptions 50, Alignments 50.
  • BLASTn defaults are again preferably used.
  • GCG Wisconsin Package defaults are Gap Weight 12, Length weight 4.
  • the present invention also includes the detection of the inhibitor or inhibitors in body fluids and tissues for the pu ⁇ ose of diagnosis or prognosis of diseases such as cancer.
  • the present invention also includes the detection of inhibitor binding sites and receptors in cells and tissues.
  • the present invention also includes methods of treating or preventing angiogenic diseases and processes including, but not limited to, arthritis and tumors by stimulating the production of the inhibitor, and/or by administering isolated inhibitor, or desirable purified inhibitor, or inhibitor agonists or antagonists, and/or inhibitor-specific antisera or antisera directed against inhibitor-specific antisera to a patient. Additional treatment methods include administration of the inhibitor, biologi- cally active fragments thereof, inhibitor analogs, inhibitor-specific antisera, or inhibitor receptor agonists and antagonists linked to cytotoxic agents.
  • Passive antibody therapy using antibodies that specifically bind the inhibitor can be employed to modulate angiogenic-dependent processes such as reproduction; development, and wound healing and tissue repair.
  • antisera directed to the Fab regions of inhibitor-specific antibodies can be administered to block the ability of endogenous inhibitor-specific antisera to bind inhibitor.
  • the present invention also encompasses gene therapy, whereby the gene encoding the inhibitor or inhibitors is regulated in a patient.
  • Gene therapy encompasses inco ⁇ oration of DNA sequences into somatic cells or germ line cells for use in either ex vivo or in vivo therapy.Gene therapy functions to replace genes, augment normal or abnormal gene function, and to combat infectious diseases and other pathologies.
  • Strategies for treating these medical problems with gene therapy include therapeutic strategies, such as identifying the defective gene and then adding a functional gene to either replace the function of the defective gene or to augment a slightly functional gene; or prophylactic strategies, such as adding a gene to the product protein that will treat the condition or that will make the tissue or organ more susceptible to a treatment regimen.
  • a nucleic acid sequence coding for the inhibitor may be placed in a patient and thus prevent occunence of angiognesis; or a gene that makes tumor cells more susceptible to radiation could be inserted and then radiation of the tumor would cause increased killing of the tumor cells.
  • Non-viral vectors may be used which include liposomes coated with DNA.
  • liposome/DNA complexes may be directly injected intravenously into the patient. It is believed that the liposome/DNA complexes are concentrated in the liver where they deliver the DNA to macrophages and Kupfter cells. These cells are long lived and thus provide long term expression of the delivered DNA.
  • vectors or the "naked" DNA of the gene may be directly injected into the desired organ, tissue or tumor for targeted delivery of the therapeutic DNA.
  • Gene therapy methodologies can also be described by delivery site. Fundamental ways to deliver genes include ex vivo gene transfer, in vivo gene transfer and in vitro gene transfer.
  • ex vivo gene transfer cells are taken from the patient and grown in cell culture. The DNA is transfected into the cells, the transfected cells are expanded in number and then reimplanted in the patient.
  • in vitro gene transfer the transformed cells are cells growing in culture, such as tissue culture cells, and not particular cells from a particular patient. These "laboratory cells" are transfected, the transfected cells are selected and expanded for either implantation into a patient or for other uses.
  • In vivo gene transfer involves introducing the DNA into the cells of the patient when the cells are within the patient. Methods include using a noninfectous virus to deliver the gene in the patient or injecting naked DNA into a site in the patient and the DNA is taken up by a percentage of cells in which the gene product protein is expressed. Additionally, the other methods described herein, such as use of a "gene gun", may be used for in vitro insertion ot endothelial cell proliferation inhibitor DNA or inhibitor regulatory sequences.
  • Chemical methods of gene therapy may involve a lipid based compound, not necessarily a liposome, to ferry the DNA across the cell membrane.
  • Lipofectins or cytofectins lipid-based positive ions that bind to negatively charged DNA, make a complex that can cross the cell membrane and provide the DNA into the interior of the cell.
  • Another chemical method uses receptor-based endocytosis, which involves binding a specific ligand to a cell surface receptor and developing and transporting it across the cell membrane. The ligand binds to the DNA and the whole complex is transported into the cell.
  • the ligand gene complex is injected into the blood stream and then target cells that have the receptor will specifically bind the ligand and transport the ligand-DNA complex into the cell.
  • viral vectors to insert genes into cells.
  • altered retrovirus vectors have been used in ex vivo methods to introduce genes into peripheral and tumor-infiltrating lymphocytes, hepatocytes, epidermal cells, myocytes, or other somatic cells. These altered cells are then introduced into the patient to provide the gene product from the inserted DNA.
  • Viral vectors have also been used to insert genes into cells using in vivo protocols. To direct tissue-specific expression of foreign genes, cis-acting regulatory elements or promoters that are known to be tissue specific can be used. Alternatively, this can be achieved using in situ delivery of DNA or viral vectors to specific anatomical sites in vivo.
  • gene transfer to blood vessels in vivo was achieved by implanting in vitro transduced endothelial cells in chosen sites on arterial walls.
  • the virus infected surrounding cells which also expressed the gene product.
  • a viral vector can be delivered directly to the in vivo site, by a catheter for example, thus allowing only certain areas to be infected by the virus, and providing long-term, site specific gene expression.
  • In vivo gene transfer using retrovi- rus vectors has also been demonstrated in mammary tissue and hepatic tissue by injection of the altered virus into blood vessels leading to the organs.
  • Viral vectors that have been used for gene therapy protocols include but are not limited to, retroviruses, other RNA viruses such as polio virus or Sindbis virus, adenovirus, adeno-associated virus, he ⁇ es viruses, SV 40, vaccinia and other DNA viruses.
  • Replication-defective murine retroviral vectors are the most widely utilized gene transfer vectors.
  • Murine leukemia retroviruses are composed of a single strand RNA complex - ed with a nuclear core protein and polymerase (pol) enzymes, encased by a protein core (gag) and sunounded by a glycoprotein envelope (env) that determines host range.
  • retroviral vector systems exploit the fact that a minimal vector containing the 5' and 3' LTRs and the packaging signal are sufficient to allow vector packaging, infection, and integration into target cells providing that the viral structural proteins are supplied in trans in the packaging cell line. Fundamental advantages of retroviral vectors for gene transfer include efficient infection and gene expression in most cell types, precise single copy vector into target cell chromosomal DNA, and ease of manipulation of the retroviral genome.
  • the adenovirus is composed of linear double stranded DNA complexed with core proteins and surrounded with capsid proteins. Advances in molecular virology have led to the ability to exploit the biology of these organisms in order to create vectors capable of transducing novel genetic sequences into target cells in vivo.
  • Adenoviral-based vectors will express gene product peptides at high levels.
  • Adenoviral vectors have high efficiencies of infectivity, even with low titers of virus. Additionally, the virus is fully infective as a cell free virion so injection of producer cell lines are not necessary. Another potential advantage to adenoviral vectors is the ability to achieve long term expression of heterologous genes in vivo.
  • DNA delivery include fusogenic lipid vesicles such as liposomes or other vesicles for membrane fusion, lipid particles of DNA inco ⁇ orating catio- nic lipid such as lipofectin, polylysine-mediated transfer of DNA, direct injection of DNA, such as microinjection of DNA into germ or somatic cells, pneumatically delivered DNA-coated particles, such as the gold particles used in a "gene gun", and inorganic chemical approaches such as calcium phosphate transfection.
  • Another method, ligand mediated gene therapy involves complexing the DNA with specific ligands to form ligand-DNA conjugates to direct the DNA to specific cells or tissue.
  • Non- integration of the transfected DNA would allow the transfection and expression of gene product proteins in terminally differentiated, non-proliferative tissues for a prolonged period of time without fear of mutational insertions, deletions, or alterations in the cellular or mitochondrial genome. Long-term, but not necessarily permanent transfer of therapeutic genes into specific cells may provide treatments for genetic diseases or for prophylactic use.
  • the DNA could be reinjected periodically to maintain the gene product level without mutations occuring in the genomes of the recipient cells.
  • Non- integration of exogenous DNAs may allow for the presence of several different exogenous DNA constructs within one cell with all of the constructs expressing various gene products.
  • Particle-mediated gene transfer methods were first used in transforming plant tissue. With a particle bombardment device, or "gene gun", a motive force is generated to accelerate DNA-coated high density particles (such as gold or tungsten) to a high velocity that allows penetration of the target organs, tissues or cells. Particle bombardment can be used in in vitro systems, or with ex vivo or in vivo techniques to introduce DNA into cells, tissues or organs.
  • a particle bombardment device or "gene gun”
  • DNA-coated high density particles such as gold or tungsten
  • Electroporation for gene transfer uses an electrical cunent to make cells or tissues susceptible to electroporation-mediated gene transfer.
  • a brief electric impulse with a given field strength is used to increase the permeability of a membrane in such a way that DNA molecules can penetrate into the cells.
  • This technique can be used in in vitro systems, or with ex vivo or in vivo techniques to introduce DNA into cells, tissues or organs.
  • Carrier mediated gene transfer in vivo can be used to transfect foreign DNA into cells.
  • the carrier-DNA-complex can be conveniently introduced into body fluids or the bloodstream and then site specifically directed to the target organ or tissue in the body.
  • Both liposomes and polycations, such as polylysine, lipofectins or cytofectins can be used.
  • Liposomes can be developed which are cell specific or organ specific and thus the foreign DNA carried by the liposome will be taken up by target cells. Injection of immunoliposomes that are targeted to a specific receptor on certain cells can be used as a convenient method of inserting the DNA into the cells bearing the receptor.
  • Another carrier system that has been used is the asialoglycoportein/polylysine conjugate system for carrying DNA to hepatocytes for in vivo gene transfer.
  • the transfected DNA may also be complexed with other kinds of carriers so that the DNA is carried to the recipient cell and then resides in the cytoplasm or in the nucie- oplasm.
  • DNA can be coupled to carrier nuclear proteins in specifically engineered vesicle complexes and carried directly into the nucleus.
  • Gene regulation of the inhibitor or inhibitors of the present invention may be accomplished by administering compounds that bind to the gene for the inhibitor, or control regions associated with the gene, or its corresponding RNA transcript to modify the rate of transcription or translation.
  • cells transfected with a DNA sequence encoding the inhibitor may be administered to a patient to provide an in vivo source of inhibitor.
  • cells may be transfected with a vector containing a nucleic acid sequence encoding the inhibitor.
  • vector means a carrier that can contain or associate with specific nucleic acid seqnences, which functions to transport the specific nuclic acid sequences into a cell.
  • vectors include plasmids and infective microorganisms such as viruses, or non-viral vectors such as ligand-DNA conjugates, liposomes, lipid- DNA complexes. It may be desirable that a recombinant DNA molecule comprising an endothelial cell proliferation inhibitor DNA sequence is operatively linked to an expression control sequence to form an expression vector capable of expressing the inhibitor.
  • the transfected cells may be cells derived from the patient's normal tissue, the patient's diseased tissue, or may be non-patient cells.
  • tumor cells removed from a patient can be transfected with a vector capable of expressing the inhibitor protein of the present invention and re-introduced into the patient.
  • the transfected tumor cells produce levels of inhibitor in the patient that inhibit the growth of the tumor.
  • Patients may be human or non-human animals.
  • inhibitor DNA may be directly injected, without the aid of a carrier, into a patient.
  • inhibitor DNA may be injected into skin, muscle or blood.
  • Inhibitor expression may continue for a long-period of time or inhibitor DNA may be administered periodically to maintain a desired level of the inhibitor protein in the cell, the tissue or organ or biological fluid.
  • angiogenic peptides e.g. aFGF, bFGF, VEGF, IL-8, GM-CSF, etc.
  • angiogenic peptides e.g. aFGF, bFGF, VEGF, IL-8, GM-CSF, etc.
  • angiogenic peptides must be produced in an amount sufficient to overcome the action of endothelial cell inhibitor (inhibitors of angiogenesis) for a primary tumor to continue to expand its population. Once such a primary tumor is growing well, it continues to release endothelial cell inhibitors into the circulation.
  • these inhibitors act remotely at a distance from the primary tumor, target capillary endothelium of a metastasis from an intrava- scular direction, and continue to circulate.
  • the capillary endothelium in its neighborhood could be inhibited by incoming inhibitor.
  • Production of the approximately endothelial cell proliferation inhibitor of the present invention in accomplished using similar techniques can be accomplished using recombinant DNA techniques including the steps of (1) identifying and purifying the inhibitor as described herein and exemplified by the Figures.
  • determining the N-terminal amino acid sequence of the purified inhibitor (3 ) synthetically generating 5' and 3' DNA oligonucleotide primers for the inhibitor sequence, (4) amplifying the inhibitor gene sequence using polymerase, (5) inserting the amplfied sequence into an appropriate vector such as an expression vector, (6) inserting the gene containing vector into a microorganism or other expression system capable of expressing the inhibitor gene, and (7) isolating the recombinantly produced inhibitor.
  • Appropriate vectors include viral, bacterial and eukaryotic (such as yeast) expression vectors.
  • Yet another method of producing the inhibitor, inhibitors or biologically active fragments thereof is by peptide synthesis.
  • the amino acid sequence of the inhibitor can be determined, for example by automated peptide sequencing methods.
  • the DNA sequence can be determined using manual or automated sequencing methods well know in the art.
  • the nucleic acid sequence in turn provides information regarding the amino acid sequence.
  • peptide fragments can be synthesized by techniques well known in the art, as exemplified bv "Solid Phase Peptide Synthesis: A Practical Approach” E. Atherton and R.C. Sheppard. IRL Press, Oxford, England. Multiple fragments can be synthesized which are subsequently linked together to form larger fragments. These synthetic peptide fragments can also be made with amino acid substitutions at specific locations in order to test for agonistic and antagonistic activity in vitro and in vivo. Peptide fragments that possess high affinity bin- ding to tissues can be used to isolate receptors the bind the inhibitor on affinity columns.
  • the inhibitor or inhibitors are effective in treating diseases or processes such as angiogenesis, that are mediated by, or involve, endothelial cell proliferation.
  • the present invention includes the method of treating an angiogenesis mediated disease with an effective amount of inhibitor, or a biologically active fragment thereof, or combinations of inhibitor fragments that collectively possess anti-angiogenic activity or inhibitor agonists and antagonists.
  • the angiogenesis mediated diseases include, but are not limited to, solid tumors; blood born tumors such as leukemias; tumor metastasis; benign tumors, for example hemangiomas, acoustic neuromas, neurofibromas, trachomas, and pyogenic granulomas; rheumatoid arthritis; psoriasis; ocular angiogenic diseases, for example, diabetic retinopathy, retinopathy of prematurity, macular degeneration, corneal graft rejection, neovascular glaucoma, retrolental fibroplasia, rubeosis; Osier-Webber Syndrome; myocardial angiogenesis; plaque neovascularization; telangiectasia; hemophiliac joints; angiofibroma; and wound granulation.
  • solid tumors such as leukemias
  • tumor metastasis such as leukemias
  • benign tumors for example hemangiomas, acoustic
  • the inhibitor is useful in the treatment of diseases of excessive or abnormal stimulation of endothelial cells. These diseases include, but are not limited to, intestinal adhesions, atherosclerosis, scleroderma, and hypertrophic scars, i.e., keloids.
  • the inhibitor can be used as a birth control agent by preventing vascularization required for embryo implantation.
  • the inhibitor is useful in the treatment of diseases that have angiogenesis as a pathologic consequenee such as cat scratch disease (Rochele minalia quintosa) and ulcers (Helicobacter pylori).
  • the synthetic peptide fragments of the inhibitor have a variety of uses.
  • the peptide that binds to receptor capable of binding the inhibitor with high specificity and avidity is radiolabeled and employed for visualization and quantitation of binding sites using autoradiographic and membrane binding techniques.
  • labeling inhibitor or peptide fragments thereof with short lived isotopes enables visualization of receptor binding sites in vivo using positron emission tomo- graphy or other modern radiographic techniques in order to locate tumors with inhibitor binding sites.
  • Cytotoxic agents such as ricin are linked to the inhibitor, and high affinity peptide fragments thereof, thereby providing a tool for destruction of cells that bind the inhibitor. These cells may be found in many locations, including but not limited to, mic- rometastases and primary tumors. Peptides linked to cytotoxic agents are infused in a manner designed to maximize delivery to the desired location. For example, delivery may be accomplished through a cannula into vessels supplying the target site or directly into the target. Such agents are also delivered in a controlled manner through osmotic pumps coupled to infusion cannulae. A combination of inhibitor antagonists may be co-applied with stimulators of angiogenesis to increase vascularization of tissue. This therapeutic regimen provides an effective means of destroying metastatic cancer.
  • the inhibitor or inhibitors may be used in combination with other compositions and procedures for the treatment of diseases.
  • a tumor may be treated conventionally with surgery, radiation or chemotherapy combined with the inhibitor and then the inhibitor may be subsequently administered to the patient to extend the dormancy of micrometastases and to stabilize and inhibit the growth of any residual primary tumor.
  • the inhibitor, fragments thereof, inhibitor-specific antisera, inhibitor receptor agonists and antagonists, or combinations thereof are combined with pharmaceutically acceptable excipients, and optionally sustained-release matrix, such as biodegradable polymers, to form therapeutic compositions.
  • a sustained-release matrix is a matrix made of materials, usually polymers, which are degradable by enzymatic or acid/base hydrolysis or by dissolution. Once inserted into the body, the matrix is acted upon by enzymes and body fluids.
  • the sustained-release matrix desirably is chosen from biocompatible materials, such as liposomes, polylactides (polylactic acid), polyglycolide (polymer of glycolic acid), po- lylactide co-glycolide (co-polymers of lactic acid and glycolic acid), polyanhydrides, poly(ortho)esters, polypeptides, hyaluronic acid, collagen, chondroitin sulfate, carboxyhc acids, fatty acids, phospholipids, polysaccharides, nucleic acids, polyamino acids, amino acids such as phenylalanine, tyrosine, isoleucine, polynucleotides, polyvinyl propylene, polyvinylpyrrolidone and silicone.
  • a prefened biodegradable matrix is a matrix of one of either polylactide, polyglycolide, or polylactide co-glycolide (co- polymers of lactic acid and glycolic acid).
  • the angiogenesis-modulating therapeutic composition of the present invention may be a solid, liquid or aerosol and may be administered by any known route of administration.
  • solid therapeutic compositions include pills, creams, and implantable dosage units.
  • the pills may be administered orally, the therapeutic creams may be administered topically.
  • the implantable dosage units may be administered locally, for example at a tumor site, or which may be implanted for systemic release of the therapeutic angiogenesis modulating composition, for example subcutaneously.
  • liquid composition include formulations adapted for injection subcutaneously, intravenously, intraarterially and formulations for topical and intraocular administration.
  • aerosol formulations include inhaler formulation for administration to the lungs.
  • the inhibitor proteins and peptides of the present invention also can be used to generate antibodies that are specific for the inhibitor and its receptor.
  • the antibodies can be either polyclonal antibodies or monoclonal antibodies. These antibodies that specifically bind to the inhibitor or inhibitor receptors can be used in diagnostic methods and kits that are well known to those of ordinary skill in the art to detect or quantify the inhibitor levels or inhibitor receptors levels in a body fluid or tissue. Results from these tests can be used to diagnose or predict the occurrence or recurrence of a cancer and other angiogenic mediated diseases.
  • the inhibitor or inhibitors also can be used to develop a diagnostic method and kit to detect and quantify antibodies capable of binding the inhibitor. These kits would permit detection of circulating inhibitor-specific antibodies. Patients that have such circulating anti-inhibitor antibodies may be more likely to develop multiple tumors and can- cers, and may be more likely to have recurrences of cancer after treatments or periods of remission.
  • the Fab fragments of these antibodies may be used as antigens to generate anti-inhibitor-specific Fab-fragment antisera which can be used to neutralize anti- inhibitor antibodies. Such a method would reduce the removal of circulating inhibitor by anti-inhibitor antibodies, thereby effectively elevating circulating inhibitor levels.
  • Another aspect of the present invention is a method of blocking the action of excess endogenous inhibitor. This can be done by passively immunizing a human or animal with antibodies specific for the undesired inhibitor in the system. This treatment can be important in treating abnormal ovulation, menstruation and placentation, and vasculo- genesis. This provides a useful tool to examine the effects of inhibitor removal on metastatic processes.
  • the Fab fragment of inhibitor-specific antibodies contains the binding site for inhibitor. This fragment is isolated from inhibitor-specific antibodies usig techniques known to those skilled in the art.
  • the Fab fragment of inhibitor-specific antisera are used as antigens to generate production of anti-Fab fragment serum. Infusion of this antiserum against the Fab fragments specific for the inhibitor prevents the inhibitor from binding to inhibitor antibodies.
  • Therapeutic benefit is obtained by neutralizing endogenous anti-inhibitor antibodies by blocking the binding of inhibitor to the Fab fragments or anti-inhibitor.
  • the net effect of this treatment is to facilitate the ability of endogenous circulating inhibitor to reach target cells, thereby decreasing the spread of metastases.
  • the present invention is contemplated to include any derivatives of the inhibitor that have endothelial cell proliferation inhibitor activity.
  • the present invention includes the entire inhibitor protein, derivatives of the inhibitor protein and biologically-active fragments of the inhibitor protein. These include proteins with inhibitor activity that have amino acid substitutions or have sugars or other molecules attached to amino acid functional groups.
  • the present invention also includes genes that code for the inhibitor and the inhibitor receptor, and to proteins that are expressed by those genes.
  • the proteins and protein fragments with the inhibitor activity described above can be provided as isolated and substantially purified proteins and protein fragments in pharmaceutically acceptable formulations using formulation methods known to those of oridinary skill in the art. These formulations can be administered by standard routes.
  • the combinations may be administered by the topical, transdermal, intraperito- neal, intracranial, intracerebroventricular, intracerebral, inrravaginal, intrauterine, oral, rectal or parenteral (e.g., intravenous, intraspinal. subcutaneous or intramuscular) route.
  • the inhibitor may be inco ⁇ orated into biodegradable polymers allowing for sustained release of the compound, the polymers being implanted in the vicinity of where drug delivery is desired, for example, at the site of a tumor or implanted so that the inhibitor is slowly released systemically.
  • Osmotic minipumps may also be used to provide controlled delivery of high concentrations of the inhibitor through cannulae to the site of interest, such as directly into a metastatic growth or into the vascular supply to that tumor.
  • the biodegradable polymers and their use are described, for example, in detail in Brem et al., J. Neurosurg. 74:441-446 (1991), which is hereby inco ⁇ orated by reference in its entirety.
  • the dosage of the inhibitor of the present invention will depend on the disease state or condition being treated and other clinical factors such as weight and condition of the human or animal and the route of administration of the compound. For treating humans or animals, approximately 5 mg/kg/day, administered once a day, sppresses tumor growth to (50%. In the same dosages, angiostatin does not have any effect. Depending upon the half-life of the inhibitor in the particular animal or human, the inhibitor can be administered between several times per day to once a week. It is to be understood that the present invention has application for both human and veterinary use. The methods of the present invention contemplate single as well as multiple administrations, given either simultaneously or over an extended period of time.
  • the inhibitor formulations include those suitable for oral, rectal, ophthalmic (including intravitreal or intracameral, nasal, topical (including buccal and sublingual), intrauterine, vaginal or parenteral (including subcutaneous, intraperitoneal, intramuscular, intra- venous, intradermal, intracranial, intratracheal, and epidural) administration.
  • the inhibitor formulations may conveniently be presented in unit dosage form and may be prepared by conventional pharmaceutical techniques. Such techniques include the step of bringing into association the active ingredient and the pharmaceutical carrier(s) or ex- cipient(s). In general, the formulations are prepared by uniformly and intimately bringing into association the active ingredient with liquid carriers or finely divided solid carriers or both, and then, if necessary, shaping the product.
  • Formulations suitable for parenteral administration include aqueous and non-aqueous sterile injection solutions which may contain anti-oxidants, buffers, bacteriostats and solutes which render the formulation isotonic with the blood of the intended recipient; and aqueous and non-aqueous sterile suspensions which may include suspending agents and thickening agents.
  • the formulations may be presented in unit-dose or multi- dose containers, for example, sealed ampules and vials, and may be stored in a freeze- dried (Iyophilized) condition requiring only the addition of the sterile liquid carrier, for example, water for injections, immediately prior to use.
  • Extemporaneous injection solutions and suspensions may be prepared from sterile powders, granules and tablets of the kind previously described.
  • Preferred unit dosage formulations are those containing a daily dose or unit, daily sub-dose, or an appropriate fraction thereof, of the administered ingredient.
  • the formulations of the present invention may include other agents conventional in the art having regard to the type of formulation in question.
  • cytotoxic agents may be inco ⁇ orated or otherwise combined with inhibitor proteins, or biologically functional peptide fragments thereof, to provide dual therapy to the patient.
  • Angiogenesis inhibiting peptides of the present invention can be synthesized in a standard microchemical facility and purity checked with HPLC and masspectrophotome- try. Methods of peptide synthesis, HPLC purification and mass spectrophotometry are commonly known to those skilled in these art. Inhibitor peptides and inhibitor recep- tors peptides are also produced in recombinant E. coli or yeast expression systems, and purified with column chromatography.
  • Different peptide fragments of the intact inhibitor molecule can be synthesized for use in several applications including, but not limited to the following; as antigens for the development of specific antisera, as agonists and antagonists active at inhibitor binding sites, as peptides to be linked to, or used in combination with, cytotoxic agents for targeted killing of cells that bind the inhibitor.
  • the amino acid sequences that comprise these peptides are selected on the basis of their position on the exterior regions of the molecule and are accessible for binding to antisera.
  • the amino and carboxyl termini of the inhibitor, as well as the mid-region of the molecule are represented separately among the fragments to be synthesized.
  • peptide sequences are compared to known sequences using protein sequence databases such as GenBank, Brookhaven Protein, SWISS-PROT, and PIR to determine potential sequence homologies. This information facilitates elimination of sequences that exhibit a high degree of sequence homology to other molecules, thereby enhancing the potential for high specificity in the development of antisera, agonists and antagonists to the inhibitor.
  • Inhibitor and inhibitor derived peptides can be coupled to other molecules using standard methods, eg. labelling or cell type targeting or cytotoxic molecules.
  • the amino and carboxyl termini of the inhibitor both contain tyrosine and lysine residues and are isotopically and nonisotopically labeled with many techniques, for example radiola- beling using conventional techniques (tyrosine residues- chloramine T, iodogen, lacto- peroxidase; lysine residues- Bolton-Hunter reagent). These coupling techniques are well known to those skilled in the art.
  • tyrosine or lysine is added to fragments that do not have these residues to facilitate labeling of reactive amino and hydroxyl groups on the peptide.
  • the coupling technique is chosen on the basis of the functional groups available on the amino acids including, but not limited to amino, sulfhydral, carboxyl, amide, phenol and imidazole.
  • Various reagents used to effect the- se couplings include among others, glutaraladehyde, diazotized benzidine, carbodiimi- de, and p-benzoquinone.
  • Inhibitor peptides are chemically coupled to isotopes, enzymes, carrier proteins, cytotoxic agents, fluorescent molecules, chemiluminescent, bio- luminescent and other compounds for a variety of applications. The efficiency of the coupling reaction is determined using different techniques appropriate for the specific reaction.
  • radiolabeling of an inhibitor peptide with 12i I is accomplished using chloramine T and Na 125 I of high specific activity.
  • the reaction is terminated with sodium metabisulfite and the mixture is desalted on disposable columns.
  • the labeled peptide is eluted from the column and fractions are collected. Aliquots are removed from each fraction and radioactivity measured in a gamma counter. In this manner, the unreacted Na 125 I is separated from the labeled inhibitor peptide.
  • the peptide fractions with the highest specific radioactivity are stored for subsequent use such as analysis of the ability to bind to inhibitor antisera.
  • peptide conjugation is for production of polyclonal antisera.
  • inhibitor peptides containing lysine residues are linked to purified bovine serum albumin using glutaraldehyde.
  • the efficiency of the reaction is determined by measuring the inco ⁇ oration of radiolabeled peptide. Unreacted glutaraldehyde and peptide are separated by dialysis.
  • the conjugate is stored for subsequent use.
  • Antiserum specific for the inhibitor, inhibitor analogs, peptide fragments of the inhibitor and the inhibitor receptor can be generated. After peptide synthesis and purification, both monoclonal and polyclonal antisera are raised using established techniques known to those skilled in the art.
  • polyclonal antisera may be raised in rabbits, sheep, goats or other animals.
  • Inhibitor peptides conjugated to a carrier molecule such as bovine serum albumin, or inhibitor itself, is combined with an adjuvant mixture, emulsified and injected subcutaneously at multiple sites on the back, neck, flanks, and sometimes in the rootpads.
  • Booster injections are made at regular intervals, such as every 2 to 4 weeks.
  • Blood samples are obtained by venipuncture, for example using the marginal ear veins after dilation, approximately 7 to 10 days after each injection.
  • the blood samples are allowed to clot overnight at 4°C and are centrifuged at ap- proximately 2400 X g at 4°C for about 30 minutes.
  • the serum is removed, aliquoted, and stored at 4°C for immediate use for subsequent analysis.
  • All serum samples from generation of polyclonal antisera or media samples from production of monoclonal antisera are analyzed for determination of antibody titer. Titer is established through several means, for example, using dot blots and density analysis, and also with precipitation of radiolabeled peptide-antibody complexes using protein A, secondary antisera, cold ethanol or charcoal-dextran followed by activity measurement with a gamma counter.
  • the highest titer antisera are also purified on affinity columns which are commercially available. Inhibitor peptides are coupled to the gel in the affinity column. Antiserum samples are passed through the column and anti- inhibitor antibodies remain bound to the column.
  • the highest titer inhibitor-specific antisera is tested to establish the following; a) optimal antiserum dilution for highest specific binding of the antigen and lowest nonspecific binding, b) the ability to bind increasing amounts of inhibitor peptide in a standard displacement curve, c) potential cross-reactivity with related peptides and proteins of related species, d) ability to detect inhibitor peptides in extracts of plasma, urine, tissues and in cell culture media.
  • Kits for measurement of inhibitor, and the inhibitor receptor are also contemplated as part of the present invention.
  • Antisera that possess the highest titer and specificity and can detect inhibitor peptides in extracts of plasma, urine, tissues, and in cell culture media are further examined to establish easy to use kits for rapid, reliable, sensitive, and specific measurement and localization of inhibitor.
  • assay kits include but are not limited to the following techniques; competitive and non-competitive assays, radi- oimmunoassay, bioluminescence and hemiluminescence assay, fluorometric assays, sandwich assays, immunoradiometric assays, dot blots, enzyme linked assays including ELISA, microtiter plates, antibody coated strips or dipsticks for rapid monitoring of urine or blood, and immunocytochemistry.
  • competitive and non-competitive assays radi- oimmunoassay, bioluminescence and hemiluminescence assay, fluorometric assays, sandwich assays, immunoradiometric assays, dot blots, enzyme linked assays including ELISA, microtiter plates, antibody coated strips or dipsticks for rapid monitoring of urine or blood, and immunocytochemistry.
  • a radioim- munoassay (RIA) kit One example of an assay kit commonly used in research and in the clinic is a radioim- munoassay (RIA) kit.
  • RIA radioim- munoassay
  • An inhibitor RIA is illustrated below. After successful radioiodi- nation and purification of inhibitor or an inhibitor peptide, the antiserum possessing the highest titer is added at several dilutions to tubes containing a relatively constant amount of radioactivity, such as 10,000 cpm, in a suitable buffer system. Other tubes contain buffer or preimmune serum to determine the non-specific binding.
  • a dilution range (approximately 0,1 pg to 10 ng) of the inhibitor peptide used for development or the antiserum is evaluated by adding known amounts of the peptide to tubes containing radiolabeled peptide and antiserum. After an additional incubation period, for example, 24 to 48 hours, protein A is added and the tubes centrifuged, supernatant removed and the radioactivity in the pellet counted. The displacement of the binding of radiolabeled inhibitor peptide by the unlabeled inhibitor peptide (standard) provides a standard curve. Several concentrations of other inhibitor peptide fragments, inhibitor from different species, and homologous peptides are added to the assay tubes to characterize the specificity of the inhibitor antiserum.
  • Extracts of various tissues including but not limited to primary and secondary tumors, Lewis lung carcinoma, cultures of inhibitor producing cells, placenta, uterus, and other tissues such as brain, liver, and intestine, are prepared. After lyophilization or Speed Vac of the tissue extracts, assay buffer is added and different aliquots are placed into the RIA tubes. Extracts of inhibitor producing cells produce displacement curves that are parallel to the standard curve, whereas extracts of tissues that do not produce inhibitor do not displace radiolabeled inhibitor from the inhibitor. In addition, extracts of urine, plasma, and cerebrospinal fluid from animals with Lewis lung carcinoma are added to the assay tubes in increasing amounts. Parallel displacement curves indicate the utilitv of the inhibitor assay to measure inhibitor in tissues and body fluids.
  • Tissue extracts that contain inhibitor are additionally characterized by subjecting ali- quots to reverse phase HPLC. Eluate fractions are collected, dried in Speed Vac, reconstituted in RIA buffer and analyzed in the inhibitor RIA. The maximal amount of inhibitor immunoreactivity is located in the fractions conesponding to the elution position of inhibitor.
  • the assay kit provides instructions, antiserum, inhibitor or inhibitor peptide and possible radiolabeled inhibitor and/or reagents for precipitation of bound inhibitor- inhibitor antibody complexes.
  • the kit is useful for the measurement of inhibitor in biological fluids and tissue extracts of animals and humans with and without tumors.
  • This inhibitor im- munohistochemistry kit provides instructions, inhibitor antiserum, and possibly blocking serum and secondary antiserum linked to a fluorescent molecule such as fluore- scein isothiocyanate, or to some other reagent used to visualize the primary antiserum. Immunohistochemistry techniques are well known to those skilled in the art.
  • This inhibitor immunohistochemistry kit permits localization of inhibitor in tissue sections and cultured cells using both light and electron microscopy. It is used for both research and clinical pu ⁇ oses. For example, tumors are biopsied or collected and tissue sections cut with a microtome to examine sites of inhibitor production. Such information is useful for diagnostic and possibly therapeutic pu ⁇ oses in the detection and treatment of cancer.
  • Another method to visualize sites of inhibitor biosynthesis involves radiolabeling nucleic acids for use in in situ hybridization to probe for inhibitor messenger RNA.
  • the inhibitor receptor can be localized, visualized and quantitated with immunohistochemistry techniques.
  • Human plasminogen was prepared from pooled human plasma by lysine-Sepharose chromatography as previously described (Cao et al., 1996, JBC, 271, 29461-29467). Purified human plasminogen was incubated in an alkaline solution. The digested mixture was loaded in a lysine-Sepharose column and Kl-5 was eluted with a 0-25 (- aminocaproic acid gradient. The Kl-5 fraction was further purified on a Sephacryl- S200 column (2,5 x 70 to remove trace amounts of plasminogen contamination. The molecular weight was 55, 000 Dalton verified on SDS gel electrophoresis. Microse- quencing analysis revealed that Kl-5 consists of a fragment corresponding to plasminogen Lys 77- Arg 529.
  • Bovine capillary endothelial cells were maintained in DMEM with 10% heat- inactivated BCS, antibiotics and 3 ng/ml recombinant human bFGF. Cells were washed with PBS and dispersed in a 0,05% solution of trypsin. A cell suspension was made with DMEM, 10% BCS, 1% antibiotics and the concentration was adjusted to 25,000 cells/ml after hemocytometer count. Cells were plated onto gelatinized 24-well culture plates (0,5 ml/well) and were incubated (370C in 10% C02) for 14h. The medium was replaced with 0,25 ml DMEM, 5% BCS and the test samples at different concentrations were applied.
  • Human plasminogen was prepared from pooled human plasma by lysine-Sepharose chromatography as previously described (Cao et al., 1996, JBC, 271 , 29461, 29467). approximately 40 mg of plasminogen in 4 ml of glycine buffer (pH 10.5) was incubated with immobilized urokinase-activated plasmin (10 Mol of plasminogen/ 1 Mol plasmin) for 24 h at 25°C.
  • the digested mixture was loaded in a lysine-Sepharose column (1.0 x 30 cm), and Kl-5 was eluted with a 0-25 ⁇ -aminocaproic acid gradient.
  • the Kl-5 fraction was further purified on a Sephadex G-75 column (2.6 x 90).
  • the molecular weight was 55,000 verified on SDS gel electrophoresis. Microsequencing analysis revealed that Kl-5 consists of a fragment conesponding to plasminogen Lys 77 (78) - Arg 529 (530).
  • Bovine capillary endothelial cells were maintained in DMEM with 10% heat- inactivated BCS, antibiotics and 3 ng/ml recombinant human bFGF. Cells were washed with PBS and were dispersed in a 0.05% solution of trypsin. A cell suspension was made with DMEM, 10% BCS, 1% antibiotics and the concentration was adjusted to 25,000 cells/ml after hemocytometer count. Cells were plated onto gelatinized 24- well culture plates (0.5 ml/well) and were incubated (370C in 10% C02) for 14 h. The medium was replaced with 0.25 ml DMEM, 5% BCS and the test samples at different concentrations were applied.
  • CAM Chick embryo chorioallantoic membrane assay
  • mice Male 6-week-old C57B16/J mice were used for tumor studies.
  • Murine T241 fibrosarcoma cells (1 x 10 6 ) growing in a log phase were harvested, resuspended in PBS, and implanted subcutaneously in the midline dorsum of each animal in a volume of 100 ⁇ l. Three mice were used in each treatment and control group.
  • Subcutaneous injections with either 100 ⁇ l of PBS or 100 ⁇ l of Kl-5 were begun shortly after injection of tumor cells and continued once a day, for a total of 20 days. Visible tumors were present after 24 h. Primary tumors were present after 24 h. Primary tumors were measured blindly using digital calipers on the days indicated.
  • Bovine capillary endothelial (BCE) cells were kindly provided by Dr. Judah Folkman and maintained in DME medium with 10% heat- inactivated bovine calf serum, antibiotics, and 3 ng/ml of recombinant human fibroblast growth factor-2(FGF-2, bFGF) (Scios Nova Inc. Mountainview, CA).
  • FGF-1 recombinant human fibroblast growth factor- 1 (FGF-1) was expressed and purified as previously described (28. Cao, Y. & Pettersson, R. F.
  • Murine T241 fibrosarcoma tumor cells were maintained in culture in DME medium supplemented with 10% FCS (Hyclone Laboratories, Logan UT) and antibiotics.
  • FCS Hyclone Laboratories, Logan UT
  • Male 5- 6-wk-old C57B16/J mice Male 5- 6-wk-old C57B16/J mice (MTC, Karolinska Institute, Sweden) were acclimated and caged in groups of six or less. Animals were anaesthetized in a methoxyflurane chamber before all ⁇ ocedures and killed with a lethal dose of methoxyflurane. All animal studies were reviewed and approved by the animal care and use committee of the Sweden. Preparation of proteolytic fragments of human Kl-5 and angiostatin.
  • N-terminal Glu 1 -Pgn was purified from outdated and citrated human blood plasma by affinity chromatography on L-Lysine-Sepharose, with a gradient of the ligand, 6-aminohexanoic acid (2. Cao, Y., Ko, R.-W., Davidson, D., Schaller, J., Marti, D., Sohndel, S., McCance, S. G., O'Reilly, M.S., Llinas, M. & Folkman, J. (1996) J. Chem.
  • Kl-5 was eluted from the column with a 0-25 m M linear gradient of 6-aminocapronic acid (Sigma).
  • the protein fraction containing Kl-5 was further purified with a Sephadex G- 75 column (2.6 x 90 cm). The purified Kl-5 was dialyzed against distilled H 2 0 and lyophilozed. The purity of Kl-5 was analyzed by SDS-PAGE.
  • the purified Kl-5 was analyzed by N-terminal and C-terminal sequencing.
  • Human angiostatin was prepared by diestion of Pgn with procine elastase and purified by affinity chromatography on lysine-Sepharose 4B as previously described (2. Cao, Y., Ko, R.-W., Davidson, D., Schaller, J., Marti, D., Sohndel, S., McCance, S. G., O'Reilly, M.S., Llinas, M. & Folkman, J. (1996) J. Biol. Chem. 271, 29461-19467.)
  • Bovine capillary endothelial (BCE) cells were isolated as described previously (30. Folkman, J., Haudenschild, C. C. & Zetter, B. R. (1979) Proc. Natl. Acad. Sci. USA. 76, 5217-5121.) BCE cells were maintained in DME medium containing 10% heat-inactivated bovie calf serum (BCS) and 3 ng/ml of recombinant human bFGF. Cells growing in gelatinized 6-well plates were dispersed in 0.05% solution and resuspended with DME medium containing 10% BCS.
  • BCS heat-inactivated bovie calf serum
  • Chick embryo chorioallantoic membrane (CAM) assay The CAM assay was carried out as previously described (31. Cao., Y., Chen, C, Weatherbee, J. A., Tsang, M. & Folkman, J. (1995) J. Exp. Med. 182, 2069-2077.) (32. Nguyen, M., Shing, Y. & Filk- man, . (1994) Microvascular Res. 47, 31-40.) Three-day-old fertilized white Leghorn eggs (OVA Production, Sorgarden, Sweden) were cracked and chick embryos with intact yolks were carefully placed in 20 x 100 mm plastic petri-dishes.
  • Mouse corneal micropocket assay The mouse corneal assay was performed as previously described (27. Cao, Y, O'Reilly, M. S., Marshall, B., Flynn, E., Ji, W. R. & Folkman, J. (1998) J. Clin. Invest. 101 , 1055-1063. 31. Cao, Y., Chen, C, Weatherbee, J. A., Tsang, M. & Folkman, J. (1995) J. Exp. Med. 182, 2069-2077. 34. Jain, R. K., Schlenger, K., Hockel, M. & F., Yuan. (1997) Nature Med. 3, 1203-1208).
  • Control group received daily subcutaneous injections of 100 ⁇ l of phosphate-buffered saline, including the day before pellet implantation.
  • the other two groups were subcutaneously injected once daily with Kl-5 and angiostatin in 100 ⁇ l of PBS at the dose of 2 mg/kg, including pretreatment with the same dose the day before corenal implantation.
  • Corneal micropockets were created with a modified von Craefe cataract knife in both eyes of each mice.
  • a pellet containing approximately 80 ng of FGF and sucrose aluminium sulfate (Bukh Meditec, Copenhagen, Denmark) coated with hydron polymer type NCC (IFN Sciences, New Brunswick, NJ) was implanted.
  • the pellet was positioned approximately 1.5 mm from the corneal limbus.
  • the maximal vessel length, clock hours and the vascular area of corneas of all mice were measured, by means of a slit-lamp stereo-microscope at a magnification of 15, on the sixth day after corneal implantation.
  • mice Male 6-wk-old C57B 16/J mice were used for tumor studies. Approximately 1 x 10 6 murine T241 frbrosarcoma cells growing in log phase were harvested, resuspended in PBS, and a single cell solution in a volume of 100 ⁇ l was implanted subcutaneously in the middle dorsum of each animal. 5 mice were used in the treated and control groups, respectively. Systemic treatment by subcutaneous injections with either 100 ⁇ l of PBS or 2-2.5 mg/kg of Kl-5 and angiostatin in PBS was begun shrotly after implantation of tumor cells and continued once daily for a total of 18-20 treatments. Visible tumors were present 72 h after implantation.
  • Tumor volumes were calculated according to the formula: width 2 x length x 0.52 as previously reported (27. Cao, Y., O'Reilly, M. S., Marshall, B., Flynn, E., Ji, W. R. & Folkman, J. (1998) J. Clin. Invest. 101, 1055-1063).
  • Tumor bearing C57B16/J animals were killed by an overdose methoxyflurane on day 20 after tumor cell implantation, and viable tumor tissues were resected and fixed with 4% formalin in phosphate-buffed saline for 24 h. Tissues were imbedde in paraffin according to standard histological procedures (27. Cao, Y., O'Reilly, M. S., Marshall, B., Flynn, E., Ji, W. R. & Folkman, J. (1998; J. Clin. Invest. 101, 1055- 1063).
  • the sections of 5 ⁇ m thickness were processed and stained with a rabbit anti- human von Willebrand factor (Dako Co ⁇ ., Ca ⁇ interia, CA) antibody as previously described (27. Cao, Y., O'Reilly, M. S., Marshall, B., Flynn, E., Ji, W. R. & Folkman, J. (1998) J. Clin. Invest. 101 , 1055-1063.).
  • Microvessels were counted per high power field (x 40) in 5 random fields of tumors from 4 mice of each group.
  • proteolytic Kl-5 Serine proteases have recently been reported to be involed in the generation of angiogenesis inhibitors such as angiostatin (35. Gately, S., Twardowski, P., Stack, m. S., Patrick, M., Boggio, L., Cundiff, D. L., Schnaper, H. W., Madison, L., Volpert, O., Bouck, N., Enghild, J., Kwaan, H. C. & Soff, G. A. (1997) Canser Res. 56, 4887-4890). Plasmin is a serine protease and angiostatin is an internal fragment of Pgn.
  • angiostatin 35. Gately, S., Twardowski, P., Stack, m. S., Patrick, M., Boggio, L., Cundiff, D. L., Schnaper, H. W., Madison, L., Volpert, O., Bouck, N., Enghil
  • Glu'-Pgn was digested with urokinase-activated plasmin as described under "Materials and Methods" (Fig. 1A).
  • the proteolytic fragments were purified by affinity chromatography on lysine- Sepharose, followed by gel filtration through a Sephadex G-75 column. SDS-gel ele- trophoresis showed that a proteolytic fragment with a molecular mass of 55 kDa was purified to homogeneity (IB).
  • Kl-5 Inhibition of endothelial cell proliferation by Kl-5.
  • purified proteolytic Kl-5 was incubated with BCE cells stimulated by FGF-2 at the concentration of 1 ng/ml.
  • Kl-5 inhibited BCE cell growth in a dose-dependent manner (Fig. 2A).
  • the concentration of Kl-5 required to reach 50% inhibiton (IC 50 ) was approximately 50 pM and the maximal inhibiton was observed at the concentration of 200 pM (2B). Higher concentrations did not further increase the inhibitory effect of Kl-5 (2B and C) on the cells.
  • the IC 50 appears to be at least 50-fold lower than that of proteolytic human angiostatin.
  • Kl-5 In the presence of Kl-5, the mo ⁇ hology of BCE cells appeared to be similar to that of untreated cells. In addition, cell proliferation ca be rescued with FGF-2 stimulation after removal of Kl-5 at a high concentration of 132 nM (2D). These data suggested that Kl-5 was not toxic to BCE cells even at a high concentration.
  • K5 of human and mouse Pgn has recently been reported to be a potent endothelial inhibitor (23. Cao, Y., Chen, A, An, S. S. A., Ji, R. W. D., Davidson, D., Cao, Y. M. & Llinas, M. (1997) J. Biol. Chem. 272, 22924-22928). Since the structure of Kl-5 contains angiostatin (Kl-4) and K5, the enhancing effect of angiostatin and K5 on inhibition of BCE cell proliferation was tested.
  • proteolytic human angiostatin did not significantly inhibit BCE cell proliferation, and approximately less than 50% inhibitory effect of BCE cell proliferation by human proteolytic K5 was observed (Fig. 3 A and B).
  • a synergistic efficacy of inhibition which was approximately the maximal inhibition (>95%), was detected when both fragments at the concentration of 1 nM were added together to BCE cells (3 A and B).
  • this synergistic inhibitory efficacy is comparable to that produced by Kl-5 alone (3B).
  • High concentrations of K5 and angiostatin did not significantly show synergistic effects on suppression of BCE cell proliferation because K5 alone displayed nearly a maximal inhibition with increased concentrations (data not shown).
  • angiostatin at the same dose did not significantly inhibit the FGF-induced corneal vascularization (5B, D, E and F) as compared with the PBS-treated group (A, D, E, and F).
  • the treated mice did not experience weight loss or unusual behavior over the course of the treatment, indicating that Kl-5 was not toxic at the dose used in our experiments.
  • Kl-5 inhibited neovascularization in vivo and tumor growth requires angiogenesis (9. Folk- man, J. (1995a) Nature Med. 1, 27-31), we determined the antitumor activity of Kl-5.
  • Proteolytic human Kl-5 was used to systemically treat C57B16/J mice bearing subcutaneously implanted primary T241 fibrosarcomas. Kl-5 at the dose of 2.5 mg/kg/day was subcutaneously injected once daily in the ventral abdomen, whereas subcutaneous tumors were growing in the midline dorsum of each mouse.
  • the complementary DNA (cDNA) sequence encoding K5 and the cDNA encoding Kl are cloned.
  • the cloning is performed by PCR technology. Once these two part of cDNA fragments have been cloned, they are fused by either PCR or enzymatic ligation. Such fusion has to be in frame in terms of amino acid translation.
  • the fused cDNA is cloned into expression vectors that can be used to produce recombinant proteins in either mammalian cells, insect cells, yeast cells and bacterial cells.
  • the proteins are fused by use of chemical compounds. Some chemicals allow the fusion of proteins directly.
  • the fusion of kringle structures also includes self fusion of the same kringle structure. For example, a Kringle 5 polymer that displays a more potent effect may be prepared. Thus, these kringle 5 or kringle 1 polymers contain several kringle 5 or kringle 1.
  • kringle l will include the first animo acid of glutamine (Glul) of plasminogen and kringle 5 will include the proline 544 (Pro544). This fragment between Glu 1-544 will cover everything needed to produce Kl-5.

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Abstract

L'invention concerne des compositions et des protéines capables de réguler la prolifération des cellules endothéliales ainsi que leurs diverses utilisations. Ces compositions et ces protéines sont caractérisées par l'inclusion de séquences d'acides aminés associées aux Kringles des mammifères 1, 2 et/ou 3 dans la même séquence que la séquence d'acide aminé du Kringle 5 ou elles consistent en fragments peptidiques actifs du point de vue anti-angiogénique ou en leurs dérivés protégés. La protéine selon l'invention présente un poids moléculaire d'environ 50-75, par exemple 50-60 kDa, de préférence environ 55 kDa, et comporte une séquence d'acide aminé qui est sensiblement semblable à celle d'un fragment de plasminogène constitué de Lys 78-Arg 530 d'une molécule de plasminogène.
PCT/SE2000/000719 1999-04-14 2000-04-14 Domaines kringle du plasminogene capables de moduler l'angiogenese in vivo WO2000061179A1 (fr)

Priority Applications (1)

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AU44451/00A AU4445100A (en) 1999-04-14 2000-04-14 Kringle domains of plasminogen, capable of modulating angiogenesis in vivo

Applications Claiming Priority (2)

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US29120099A 1999-04-14 1999-04-14
US09/291,200 1999-04-14

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WO2000061179A1 true WO2000061179A1 (fr) 2000-10-19

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WO2001044294A2 (fr) * 1999-12-15 2001-06-21 Entremed, Inc. Compositions et procedes d'inhibition de la proliferation de cellules endotheliales
WO2002040510A2 (fr) * 2000-11-02 2002-05-23 Bristol-Myers Squibb Company Fragments peptidiques modifies apparentes au plasminogene et utilisations de ces derniers en tant qu'inhibiteurs de l'angiogenese
WO2003054550A2 (fr) * 2001-12-19 2003-07-03 Abbott Laboratories Utilisations d'un recepteur des cellules endotheliales
US7008921B2 (en) 2000-09-05 2006-03-07 Karolinska Innovations Ab Materials and methods relating to endothelial cell growth inhibitors
WO2006039173A2 (fr) * 2004-09-22 2006-04-13 Abbott Laboratories Utilisations d'un recepteur des cellules endotheliales
US7144854B1 (en) 1999-09-10 2006-12-05 Conjuchem, Inc. Long lasting anti-angiogenic peptides
EP1790354A3 (fr) * 2001-09-06 2007-10-24 Omnio AB Utilisation de plasminogène pour promouvoir la guérison de plaies
US7741286B2 (en) 1999-05-17 2010-06-22 Conjuchem Biotechnologies Inc. Long lasting anti-angiogenic peptides

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Cited By (15)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7741286B2 (en) 1999-05-17 2010-06-22 Conjuchem Biotechnologies Inc. Long lasting anti-angiogenic peptides
US7144854B1 (en) 1999-09-10 2006-12-05 Conjuchem, Inc. Long lasting anti-angiogenic peptides
WO2001044294A2 (fr) * 1999-12-15 2001-06-21 Entremed, Inc. Compositions et procedes d'inhibition de la proliferation de cellules endotheliales
WO2001044294A3 (fr) * 1999-12-15 2002-02-07 Entremed Inc Compositions et procedes d'inhibition de la proliferation de cellules endotheliales
US7008921B2 (en) 2000-09-05 2006-03-07 Karolinska Innovations Ab Materials and methods relating to endothelial cell growth inhibitors
WO2002040510A3 (fr) * 2000-11-02 2003-06-05 Bristol Myers Squibb Co Fragments peptidiques modifies apparentes au plasminogene et utilisations de ces derniers en tant qu'inhibiteurs de l'angiogenese
WO2002040510A2 (fr) * 2000-11-02 2002-05-23 Bristol-Myers Squibb Company Fragments peptidiques modifies apparentes au plasminogene et utilisations de ces derniers en tant qu'inhibiteurs de l'angiogenese
EP1790354A3 (fr) * 2001-09-06 2007-10-24 Omnio AB Utilisation de plasminogène pour promouvoir la guérison de plaies
US8637010B2 (en) 2001-09-06 2014-01-28 Omnio Healer Ab Method of accelerating wound healing by administration of plasminogen
US8679482B2 (en) 2001-09-06 2014-03-25 Omnio Healer Ab Method of promoting healing of a tympanic membrane perforation using plasminogen
WO2003054550A3 (fr) * 2001-12-19 2004-05-27 Abbott Lab Utilisations d'un recepteur des cellules endotheliales
WO2003054550A2 (fr) * 2001-12-19 2003-07-03 Abbott Laboratories Utilisations d'un recepteur des cellules endotheliales
AU2002358265B2 (en) * 2001-12-19 2008-07-03 Abbott Laboratories Uses of an endothelial cell receptor
WO2006039173A2 (fr) * 2004-09-22 2006-04-13 Abbott Laboratories Utilisations d'un recepteur des cellules endotheliales
WO2006039173A3 (fr) * 2004-09-22 2006-07-20 Abbott Lab Utilisations d'un recepteur des cellules endotheliales

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