WO2000055624A2 - Elisa kit for the determination of metabolic phenotypes - Google Patents
Elisa kit for the determination of metabolic phenotypes Download PDFInfo
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- WO2000055624A2 WO2000055624A2 PCT/CA2000/000246 CA0000246W WO0055624A2 WO 2000055624 A2 WO2000055624 A2 WO 2000055624A2 CA 0000246 W CA0000246 W CA 0000246W WO 0055624 A2 WO0055624 A2 WO 0055624A2
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/94—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving narcotics or drugs or pharmaceuticals, neurotransmitters or associated receptors
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N2800/00—Detection or diagnosis of diseases
- G01N2800/52—Predicting or monitoring the response to treatment, e.g. for selection of therapy based on assay results in personalised medicine; Prognosis
Definitions
- the invention relates to an enzyme linked immunosorbent assay (ELISA) kit for the rapid determination of metabolic phenotypes including but not limited to the following enzymes, CYP 1A2 , N-acetyltransferase-1 (NAT-1), CYP 2D6, CYP 2E1, and CYP 3A4.
- the ELISA kit uses may include but not be limited to, use on a routine basis m a clinical laboratory, and allowing a physician to a) individualize therapy for the numerous drugs metabolized by these enzymes, b) to predict susceptibility to carcinogen induced diseases including many cancers, and c) to reduce the number of patients undergoing clinical testing by selecting for patients with the appropriate phenotype most likely to respond.
- Two or three phe- notypes can be distinguished: poor metabolizers (PM) , extensive metabolizers (EM) , and ultra-extensive metabolizers (UEM) .
- PM poor metabolizers
- EM extensive metabolizers
- UDM ultra-extensive metabolizers
- Knowledge of the phenotype is useful clinically because: a) the phenotype is associated with toxicities m chemical plants, diseases and cancers. b) it allows physicians to prescribe a drug regimen on the individual basis. c) it provides a rationale m the design of therapeutic drugs.
- the phenotype is determined by measurements of the molar ratio of metabolites of the drug or a probe drug m the urine samples by high pressure liquid chromatography (HPLC) or capillary electrophoresis (CE) , hence using methods which are not readily available m a clinical laboratory.
- HPLC high pressure liquid chromatography
- CE capillary electrophoresis
- the enzymes NAT1, CYP1A2 , CYP2D6, CYP2E and CYP 3A4 are involved m the metabolism of large number of drugs.
- Table 1 lists the wide array of medications that are metabolized and the enzymes involved. These include drugs used for a variety of diseases, including asthma (theophylline) , malaria (dapsone) , breast cancer (tamoxifen) , cardiovascular disease (procainimide) , organ transplant (cyclospo ⁇ ne) , common medications such as painkillers (acetaminophen, codeine) , general anesthetics (lidocaine) , and anxiolitics (valium) .
- the wide array of medications to which screening is applicable with these enzymes demonstrates the potential and the impact that a rapid phenotype screening can have on the outcome and safety of a patient's treatment.
- CYP2D6 Psychotropic drugs amiflamme, ami ryptyline, clomipramme, clozapine, desipramme, halope ⁇ - dol, lmipramme , maprotiline, methoxyphenamme, mmaprme, nortriptylme, paroxetme, perphena- zme, remoxip ⁇ de, thio ⁇ dazme, tomoxetme, trifluperidol , zuclopenthixol .
- Cardiovascular agents bufuralol, deb ⁇ soqume, encainide, flecaimde, guanoxan, mdoramm, metoprolol, mexiletin, n-propyla ⁇ maline, propafenone, propranolol, sparteine, t molol, vera- pamil .
- Miscellaneous agents chlorpropamide, codeine, dextromethorphan, methamphetamine , perhexilene, phenformin.
- CYP3A4 Benzodiazepines, cyclospo ⁇ n, dextromethorphan dihydropy ⁇ dmes , doxorubicm, erythromycm, etoposide, lidocame, lovastatm, midazolam, paclitaxel, tamoxifen
- the metabolic enzymes are responsible for the metabolism of many carcinogenic compounds. Therefore, alterations in the activity of these enzymes alter the biological activity of many carcinogens.
- Table 2 lists the xenobiotics that are metabolized by the enzymes.
- CYP1A2 4 -aminobiphenyl, heterocyclic amines (MelQx, PhIP) 4-methylnitrosamino-l- (3 -pyridyl-1-butanone) (N K, tobacco smoke product)
- CYP2D6 Is involved in the metabolism of many carcinogens, however as yet is not reported as the major metabolizer for any
- CYP2E1 nitrosodimethylamine, nitrosopyrrolidone, benzene, carbon tetrachloride, 3-hydroxypyridine (tobacco smoke product) .
- CYP3A4 N' -nitrosonornicotine (NN ) , 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone) (NNK), 5- ethylchrysene, 4 , 4 ' -methylene-bis (2 -chloroaniline) (tobacco smoke products)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- 5- ethylchrysene 4
- Table 3 lists the metabolic enzymes phenotyped by these enzymes and the cancers with which an altered phenotype is linked to an increased susceptibility.
- NAT1 N-acetyltransferase gene
- NAT1 N-acetyltransferase gene
- NAT1 has two phenotypes of slow and rapid metabolizers (e.g. NAT1*4 vs. NAT1*10 genotypes respectively. Measurement of the NAT1 activity is of clinical interest for the following reasons. Polymorphism
- NATl is polymorphic and two metabolic phenotypes can be distinguished: rapid, and slow metabolizers.
- NATl metabolizes several drugs and dietary constituents including p-aminobenzoic acid, p-aminosalicylic acid, and dapsone .
- NATl activates environmental pro- carcmogens especially diaminobenzidine, N-hydroxy-4- ammobiphenyl ; heterocyclic aromatic amines (MelQx and PhIP) .
- m another study they have an increased risk for bladder cancer (metabolize benzidme.
- NATl The activity of NATl varies broadly m a given population. Slow, and rapid NATl phenotypes have been distinguished.
- the NAT1*10 genotype that is associated with rapid metabolic phenotype was monitored m three different ethnic populations, Indian, Malaysian and Chinese. The frequency of NAT1*10 allele was 17%, 39% and 30% respectively. While the NAT1*4 genotype associated with slow metabolizers had a frequency m the same populations of 50%, 30% and 35% respectively. Therefore, it is reasonable that, m drug metabolism studies, each ethnic group can be studied separately for evidence of polymorphism and its antmode should not be extrapolated from one ethnic population to another. Dapsone
- Dapsone A classical example of the need for phenotyping in drug dosing is the case of Dapsone .
- Dapsone is used in the treatment of malaria and is being investigated for the treatment of Pneumocystis carinii pneumonia in AIDS patient.
- Adverse effects include rash, anemia, methemoglobinemia, agranulocytosis , and hepatic dysfunction.
- Dapsone is cleared from the body via the NATl metabolizing system.
- a study has shown a correlation between slow acetylation and increased adverse reactions to dapsone. (46% vs. 17% for slow and fast acetylators respectively. For, these reasons, the utility of a reliable phenotyping test is obvious.
- ELISA enzyme linked immunosorbent assay
- CYP 1A2 constitutes 15% of the total CYP 450 enzymes the human liver. Measurement of the CYP 1A2 activity is of clinical interest for the following reasons : Polymorphism
- CYP 1A2 may be polymorphic although it remains to be established firmly. Three metabolic phenotypes can be distinguished: rapid, intermediate and slow metabolizers. CYP 1A2 metabolizes several drugs and dietary constituents including acetaminophen, anti pyrme, 17 ⁇ -estradiol, caffeine, cloipramme, clozapine, flutamide (antiandrogenic) , lmipramme, paracetamol, phenacet , tacnne and theophylline.
- CYP 1A2 activates environmental pro-carcinogens especially heterocyclic amines and aromatic amines.
- CYP 1A2 is induced by a number of drugs and environmental factors such as omeprazole, lansoprasole, polyaromatic hydrocarbons and cigarette smoke. CYP 1A2 is inhibited by oral contraceptives, ketoconazole, ⁇ - napthoflavone, fluvoxamine (seronine uptake inhibitor), furafylline . Inter Ethnic Differences The activity of CYP 1A2 varies broadly (60 to 70 fold) in a given population. Slow, intermediate and rapid CYP 1A2 phenotypes have been distinguished.
- Theophylline is used in the treatment of asthma.
- theophylline toxicity continues to be a common clinical problem, and involves life-threatening cardiovascular and neurological toxicity.
- Theophylline is cleared from the body via the CYP 1A2 metabolizing system. Inhibition of CYP 1A2 by quinolone antibiotic agents or serotonine reuptake inhibitors, may result in theophyline toxicity.
- the utility of a reliable phenotyping test is obvious. Individualized Therapy It is well known that it is possible to individualize therapy for a large number of drugs -- . -i n -
- ELISA enzyme linked immunosorbent assay
- ELISA enzyme linked immunosorbent assay
- CYP 2D6 constitutes 1-3% of the total CYP 450 enzymes m the human liver. Measurement of the CYP 2D6 activity is of clinical interest for the following reasons : Polymorphism
- CYP 2D6 was the first P450 enzyme to demonstrate polymorphic expression m humans. Three metabolic phenotypes can be distinguished: poor, PM, extensive
- CYP 2D6 metabolizes a large variety of drugs and dietary constituents including: Psychotropic drugs : amiflamine, amitryptyline, clomipramine, clozapine, desipramine, haloperidol, imipramine, maprotiline, methoxyphenamine, minaprine, nortriptyline, paroxetine, perphenazine, remoxipride, thioridazine, tomoxetine, trifluperidol , zuclopenthixol .
- Psychotropic drugs amiflamine, amitryptyline, clomipramine, clozapine, desipramine, haloperidol, imipramine, maprotiline, methoxyphenamine, minaprine, nortriptyline, paroxetine, perphenazine, remoxipride, thioridazine, tomoxetine, trifluperidol , zuclopenth
- Cardiovascular agents bufuralol, debrisoquine, encainide, flecainide, guanoxan, indoramin, metoprolol, mexiletin, n- propylamaline, propafenone, propranolol, sparteine, timolol, verapamil .
- Miscellaneous agents chlorpropamide, codeine, dextromethorphan, methamphet - amine, perhexilene, phenformin.
- Induction and Inhibition CYP 2D6 is inhibited in vitro by quinidine and by viral protease inhibitors as well as by appetite suppressant drugs such as D- and L-fenfluramine .
- CYP 2D6 The activity of CYP 2D6 varies broadly in a given population. Poor (PM) , extensive (EM) and ultraextensive (UEM) phenotypes of CYP 2D6 have been distinguished.
- the PCYP 2D6 gene is inherited as an autosomal recessive trait and separates 90 and 10% of the white European and North American population into extensive (EM) and poor (PM) metabolizer phenotypes respectively.
- PM extensive American population into extensive
- PM poor
- the percentage of PM m different ethnic populations was observed, and white North Americans and Europeans have 5-10% PM's, American blacks, 1.8%, Native Thais, 1.2%, Chinese 1%, Native Malay population, 2.1%, while the PM phenotype appears to be completely absent the Japanese population. It is reasonable that, m drug metabolism studies, each ethnic group can be studied separately for evidence of polymorphism and its antinode should not be extrapolated from one ethnic population to another. Dextromethorphan/ Antide
- Dextromethorphan is a nonopioid antitussive with psychotropic effects.
- Dextromethorphan doses range from 0 to 6 mg/kg based on individual subject tolerance.
- Dextromethorphan is activated via the CYP 2D6 metabolizing system.
- Dextromethorphan produced qualitatively and quantitatively different objective and subjective effects m poor vs. extensive metabolizers (mean performance +/- SE, 95+/-0.5% for EMs vs. 86+/-6% for PMs ; p ⁇ 0.05.
- Another important drug for CYP 2D6 phenotyping is the t ⁇ cyclic antidepressants.
- PM individuals given standard doses of these drugs will develop toxic plasma concentrations, potentially leading to unpleasant side effects including dry mouth, hypotension, sedation, tremor, or in some cases life-threatening cardiotoxicity .
- administration of these drugs to UEM individuals may result in therapeutic failure because plasma concentrations of active drugs at standard doses are far too low. For, these reasons, the utility of a reliable phenotyping test is obvious.
- ELISA enzyme linked immunosorbent assay
- ELISA enzyme linked immunosorbent assay
- CYP 2E1 constitutes approximately 5% of the total CYP 450 enzymes m the human liver. Measurement of the CYP 2E1 activity is of clinical interest for the following reasons: Polymorphism
- CYP 2E1 metabolizes several drugs and dietary constituents including ethanol, acetone, acetaminophen, nitrosammes, nitrosodimethylam e , p-nitrophenol .
- CYP 2E1 activates environmental pro-carcmogens especially nitrosodimethylamme, nitrosopyrrolidone, benzene, carbon tetrachlo ⁇ de, 3- hydroxypy ⁇ dme (tobacco smoke product) .
- c2 CYP 2E1
- OR 23.6-25.7.
- Induction and Inhibition CYP 2E1 is induced by a number of drugs and environmental factors such as cigarette smoke as well as by starvation and m uncontrolled diabetes.
- CYP 2E1 is inhibited by chlormethiazole, trans- 1,2- dichloroethylene and by the isoflavonoids geissem and equol .
- the frequency of the rare c2 allele is about 4% in Caucasians and 20% in the Japanese and a study of a separate polymorphism described a rare C allele that has a frequency of about 10% in Caucasian and 25% in Japanese population.
- Japanese males had much lower levels of CYP2E1 activity as compared to Caucasian males.
- a Colombian population of mixed white (Spanish) and Asian (central American Indians) origins have an intermediate level of CYP 1A2 allele mutations as compared to the parent populations.
- Acetaminophen An example of the need for phenotyping in drug dosing is the case of acetaminophen.
- Acetaminophen is a widely used painkiller.
- acetaminophen causes hepatotoxicity at low frequency. The hepatotoxicity is due to its transformation via CYP 2E1, to a reactive metabolite (N-acetyl-p-benzoquinoneimine) which is capable of binding to nucleophiles .
- CYP 2E1 CYP 2E1
- a reactive metabolite N-acetyl-p-benzoquinoneimine
- ELISA enzyme linked immunosorbent assay
- ELISA enzyme linked immunosorbent assay
- the CYP 3A family constitutes approximately 25% of the total CYP 450 enzymes in the human liver. Measurement of the CYP 3A4 activity is of clinical interest for the following reasons:
- CYP 3A4 metabolizes several drugs and dietary constituents including benzodiazepines, erythromycin, dextromethorphan dihydropyridines , cyclosporin, lidocaine, midazolam, nifedipine, terfenadine cyclosporine A.
- CYP 3A4 activates environmental pro-carcinogens especially N' -nitrosonornicotine (NNN) , 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone) (NNK), 5-Methylchrysene, 4 , 4 ' -methylene-bis (2- chloroaniline) (tobacco smoke products) .
- NNN N' -nitrosonornicotine
- NNK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NNK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosamino- 1 -(3- pyridyl- 1 -butanone)
- NK 4-methylnitrosa
- CYP 3A4 is induced by a number of drugs such as dexamethasone, phenobarbital , primidone and the antibiotic rifampicin. Conversely CYP 3A4 is inhibited by erythromycin, grapefruit juice, indinavir, ketoconazole, miconazole, quinine, and saquinavir. Cyclosporine
- Cyclosporine is an immunosuppressant administered post transplant to protect the new organ from being rejected. Plasma levels of this drug are critical as high levels lead to renal toxicity but low levels can lead to organ rejection. Cyclosporine is metabolized via the CYP 3A4 system. Several studies have indicated the importance of monitoring CYP 3A4 activity in maintaining an effective and safe cyclosporine dose. For, these reasons, the utility of a reliable phenotyping test is obvious . Individualized Therapy
- ELISA enzyme linked immunosorbent assay
- ELISA enzyme linked immunosorbent assay
- One aim of the present invention is to provide an enzyme linked immunosorbent assay (ELISA) kit for the rapid determination of metabolic enzyme phenotype, which can be used on a routine basis in a clinical laboratory.
- Another aim of the present invention is to provide an ELISA kit which allows a physician to: a) individualize therapy of drugs metabolized by these enzymes b) to predict susceptibility to carcinogen induced diseases such as various cancers.
- Another aim of the present invention is to provide a method for determining an individual's metabolic enzyme phenotype using a non-toxic drug so as to predict his/her response and side effects profile to a wide range of potentially toxic drugs.
- the ELISA phenotyping kits will use non-toxic probe drugs for the determination of the individuals spectrum of metabolic enzyme phenotypes. Table 4 lists the probe drugs that are to be used for each of the proposed enzymes. Table 4
- Fig. 1 illustrates p-aminosalicylic acid derivatives for NATl phenotyping by ELISA
- Fig. 2 illustrates caffeine derivatives for
- Fig. 3 illustrates 1 , 7dimethylxanthine derivatives for CYP1A2 phenotyping by ELISA
- Fig. 4 illustrates 1 , 7dimethyluric acid deriva- tives for CYP1A2 phenotyping by ELISA
- Fig. 5 illustrates dextromethorphan derivatives for CYP2D6 phenotyping by ELISA
- Fig. 6 illustrates chlorzoxazone derivatives for CYP2E1 phenotyping by ELISA
- Fig. 7 illustrates dextromethorphan derivatives for CYP3A4 phenotyping by ELISA
- Fig. 8 illustrates the synthetic routes for the production of caffeine and 1 , 7-dimethylxanthine derivatives for CYP1A2 phenotyping in accordance with one embodiment of the present invention
- Fig. 9 illustrates the synthetic routes for the production of caffeine and 1 , 7-dimethyluric acid derivatives for CYP1A2 phenotyping in accordance with one embodiment of the present invention
- Fig. 10 illustrates a pattern of samples to be pipetted in a Falcon 96-well microtest tissue culture plate . DETAILED DESCRIPTION OF THE INVENTION
- probe drugs can be used to determine the CYP 1A2 phenotype (caffeine, theophylline)
- suitable probe drugs include with out limitation, caffeine, theophylline or acetaminophen.
- Caffeine is widely consumed and relatively safe.
- the phenotype has been generally determined from the ratios of 1 , 7-dimethylxanthine (1,7 DMX) + 1, 7-dimethyluric acid (1,7 DMU) and 1,3,7- trimethylxanthine (1,3,7 TMX, caffeine).
- the subjects are given an oral dose of a caffeine containing-substance, and the urinary concentrations of the target metabolites determined by
- Enzyme linked immunosorbent assays have been successfully applied in the determination of low amounts of drugs and other antigenic compounds in plasma and urine samples and are simple to carry out .
- ELISA Enzyme linked immunosorbent assays
- NAT2 N- acetyltransferase-2
- the antibodies of the present invention can be polyclonal or monoclonal antibodies raised against caffeine and two different metabolites of caffeine, which allow the measurement of the molar ratio of caffeine and these metabolites.
- the molar ratio of caffeine metabolites is used to determine the CYP 1A2 phenotype of the individual as follows :
- N-acetyl-p-aminophenol (acetaminophen), dioxane, formic acid 98-100 % glass redistilled and isobutyl chloroformate are purchased from A&C American Chemicals
- % (dry basis) on activated carbon o- phenylenediamine hydrochloride, polyoxyethylene sorbitan monolaurate (Tween 20), porcine skin gelatin, protein A-Sepharose 4B, Sephadex TM G25 fine, sodium hydride, sodium methoxide, theophylline, tributylamine, Tween TM 20, are purchased from Sigma-Aldrich (St- Louis, Missouri, USA); Silica gel particle size 0.040- 0.063 mm (230-400 mesh) ASTM Emerck Darmstadt, Germany was purchased from VWR (Montreal, Que., Canada) . Dioxane is dried by refluxing over calcium hydride for 4 hours and distilled before use. Other reagents were ACS grade .
- ID Compound II is synthesized by a procedure similar to that of Daly et al . (Daly, J.W., Mueller, C, Shamin, M. (1991) Pharmacology, 42: 309-321). 320 mg of theophylline (I) (1.78 mmole) is dissolved in 7 mL of dry dimethylformamide and 290 mg of potassium carbonate (2.1 mmole) is added to the reaction mixture. 358 ⁇ L of ethyl 6-bromohexanoate (2.02 mmole) is slowly added and the suspension is heated at 60°C for 14 hours.
- Compound V is synthesized as follows. 116 mg of 1-methyxanthine (IV) (0.7 mmole) is dissolved in 4 mL of dimethylformamide . 129 mg of potassium carbonate (0.93 mmole) is added and the resulting solution is stirred. 125 ⁇ L of ethyl-6-bromohexanoate (0.7 mmole) in 0.4 mL dimethylformamide is slowly added in three portions. The reaction mixture is heated at 50 °C for 1.5 hours and at 65 °C for 1 hour. After cooling, the suspension is filtered and the filtrate is evaporated under reduced pressure with a rotary evaporator and a high vacuum pump. The product is purified by flash chromatography on a silica gel column (40 x 1 cm) using an ethyl acetate-hexane solution (9:1, v/v) as the eluent.
- Compound VI is synthesized as follows. 31 mg of compound V (0.1 mmol) is dissolved in 1 mL of dimethyl - formamide and 660 ⁇ L of a 10% NaOH is added. The resulting solution is refluxed for 30 min (100-120 °C) . After cooling at room temperature, the solvent is evaporated under reduced pressure with a rotary evaporator and a high vacuum pump. The residue is dissolved m water and acidified to pH 4 with a 6N HC1 solution. Upon cooling, the solution yields white needle-like crystals, which are filtered and dried. 23 mg of the product (0.082 mmole) is obtained, corresponding to a yield of 82%. Synthesis of 6-amino-1-benzyl uracil (IX)
- Compound IX is synthesized according to the procedure similar of that of Hutzenlaub and Pfeiderer (Hutzenlaub, W., and Pfeiderer, W. (1979) . Liebigs Ann. Chem. 1847-1854) as follows. 8.64g of sodium methoxide (160 mmol) is dissolved m 71mL methanol . The solution is stirred and 7.55g of benzylurea (50 mmol) and 4.71mL methyl cyanoacetate (53.4 mmol) are added. The suspension is refluxed 5.5 hours at 68-70°C and cooled at room temperature. After filtration, the methanol is evaporated under reduced pressure with a rotary evaporator.
- Compound X is synthesized according to the procedure of Hutzenlaub and Pfeiderer (Hutzenlaub, W., and Pfeiderer, W. (1979) . Liebigs Ann. Chem. 1847-1854) as follows. 3.2g of 6-ammo-l-benzylurac ⁇ l (15.8 mmol) is dissolved at 100° C m 60 mL acetic acid and 3 mL acetic anhydride. 2.85 g of N-bromosuccinimide (16 mmol) is added in small portions over the next 30 minutes. The reaction mixture is stirred for 1 hour and cooled at room temperature. The precipitate is filtered and washed with small amount of cold ethanol and dried.
- the resulting oil is dissolved in a minimal amount of ethyl acetate-methanol solution (4:1; v/v) and is purified by dry flash chromatography on a silica gel packed in a sintered glass funnel (150 mL) with ethyl acetate-methanol solutions as the eluents. At each successive fraction, the solvent polarity was increased, varying from 60% ethylacetate/40% methanol to 45% ethylacetate/55% methanol (v/v) . The product is isolated as a light yellow oil. The amount of purified product obtained is 1.69g (6.1 mmol), corresponding to a yield of 57%.
- Compound XII is synthesized as follows. 1.63g of compound XI (5.9 mmol) is dissolved in 5.4 mL of 1 N NaOH solution. 270 mg of sodium bicarbonate (3.2 mmol) and 2.7 mL of water are added. 5.4 mL of di-tert-butyl dicarbonate solution in isopropanol (1.88g (8.61 mmol) is dissolved in 5.4 mL isopropanol) is added slowly to the solution of compound XI . After stirring for 3 hours at room temperature, 13.4 mL of water is added and the unreacted di-tert-butyl dicarbonate is extracted twice with 20mL of petroleum ether.
- Compound XV is synthesized as follows. 440mg of compound XIV (1.02 mmol) is dissolved in 12 mL methanol and mixed with 252mg ammonium formate (4 mmol) . 240mg of palladium-on-charcoal (10%) are added under nitrogen atmosphere. The catalytic hydrogenation is performed at room temperature for 3 hours. The catalyst is removed by filtration and the filtrate is evaporated under reduced pressure with a rotary evaporator and a high vacuum pump. 341 mg of the product is obtained (0.99 mmol) corresponding to a yield of 97%. Synthesis of 7- (4' aminobutyl) -1-methyluric acid (XVI)
- Compound XVI is synthesized as follows. 300mg of compound XV (0.875 mmol) is dissolved in 4.5mL dry dimethylformamide and mixed with 144 mg of sodium hydride (6 mmol) . The mixture is stirred at room temperature for 20 min and at 110-115 °C for 30 min. The color changes slowly to a dark yellow. After cooling, 6.5mL of water are added and the solution is acidified to pH 0 with a 6N HC1 solution. The solvents are evaporated under reduced pressure with a rotary evaporator and a high vacuum pump, and the crude product is dissolved in a ethyl acetate-methanol solution (1:4, v/v) .
- the inorganic salt is removed by filtration and the yellow filtrate is purified by flash chromatography on a silica gel column (40 x 1 cm) using a solution of ethyl acetate-methanol (3:7, v/v) as the eluent.
- the fraction containing the pure product was evaporated under reduced pressure with a rotary evaporator. After titration of the residue with isopropanol, the product is obtained as a pale yellow solid. 98.9 mg of the product is obtained (0.391 mmol) corresponding to a yield of 45%.
- ⁇ H NMR spectra of synthesized were obtained using a 500 mHz spectrophotometer (Varian XL 500 mHz, Varian Analytical Instruments, San Fernando, CA, USA) .
- Caffeine-BSA, 1 , 7-Dimethylanthine-BSA conjugates are prepared by procedure similar to that of Rojo et al. (Rojo et al . (1986) J Immunol. 137: 904-910). Fifteen mg of BSA is dissolved in 6 mL of a caffeine derivative (or 1 , 7-dimethylxanthine derivative) solution (1.25 ⁇ moles/mL of water) in a 25-mL erlenmeyer flask followed by the addition of 1.43 mL of an EDAC solution (10 mg/mL of water) . The solution is stirred overnight at room temperature and dialyzed against 500 mL water at room temperature for 48 h with two changes per day of the water.
- the conjugates are stored as 0.5 mL-aliquots at -20° C.
- the 1,7- Dimethyluric acid conjugate is prepared by the method of Peskar et al . (Peskar (1972) Eur . J. Biochem. 26: 191-195). 7.5 mg of 1,7 dimethyluric acid (0.03 mmole) is placed in a 5 mL round bottom flask and is dissolved with 1 mL of a 0. 1M Na 2 P0 4 -NaH 2 P0 4 buffer, pH 7.0.
- a volume of 500 ⁇ L of a 0.021 M glutaraldehyde solution (42.5 ⁇ L 50 % glutaraldehyde (v/v) per 10 mL of water) is added to the stirred solution.
- 100 ⁇ L of a 1M lysine in 0. 1M Na 2 P0 4 -NaH 2 P0 4 buffer, pH 7.0 is added.
- the solution is stirred for one hour and dialyzed against 250 mL of a 150 mM NaCl, 5 mM Na 2 P0 4 -NaH 2 P0 4 buffer, pH 7.0 for 48 hours with 2-3 changes per day of the buffer.
- Caffeine-KLH and 1,7- dimethylxanthine-KLH conjugates are prepared as follows. 20 mg of lyophilized powder of KLH is dissolved with 2 mL of a 0.9 M NaCl solution and dialyzed against 100 mL for 10 hours with 2 changes of the solution. To 1.1 mL KLH solution ( approximately 10 mg/mL) in a 25-mL erlenmeyer flask, is added 0.8 mL of the caffeine derivative or the 1.7-dimethylxanthine derivative ( 2.5 ⁇ mol/mL of a 0.9 M NaCl) .
- Solutions Solution A 2g Na 2 C0 3 is dissolved in 50 mL water, 10 mL of 10% SDS and 10 mL IN NaOH, bring to 100 mL volume with water. Freshly prepared.
- Solution E 98 mL Solution A, 1 mL Solution B, 1 mL
- This method gives an approximate estimate. It is useful because it allows the determination of whether the coupling proceeded as expected.
- UV ultraviolet spectrum
- the wells of a microtiter plate were coated with 10 ⁇ g mL -1 of bovine serum albumin-caffeine (or 1,7-dimethyl xanthine, 1 , 7-dimethyluric acid) conjugate in 100 mM sodium carbonate buffer, pH 9.6) overnight at 4° C (150 ⁇ L/well) . They were then washed three times with TPBS (phosphate buffer saline containing 0.05 % Tween 20) using a Nunc Immuno Wash 12 autoclavable . Unoccupied sites were blocked by an incubation with 150 ⁇ L/well of TPBS containing 0.05 % porcine gelatin for 2 h at room temperature.
- TPBS phosphate buffer saline containing 0.05 % Tween 20
- the wells were washed three times with TPBS and 150 ⁇ L of antiserum diluted m TPBS was added. After 2 h at room temperature, the wells were washed three times with TPBS, and 100 ⁇ L of goat antl-rabbit IgGs-alkalme phosphatase conjugate diluted m PBS containing 1% BSA was added. After 1 h at room temperature, the wells were washed three times with TPBS and three times with water. To the wells were added 150 ⁇ L of a solution containing MgCl2 (0. 5 mM) and p-nitrophenol phosphate (3.85 mM) m diethanolamme buffer (10 mM, pH 9.8). After 30 mm at room temperature, the absorbency was read at 405 nm with a microplate reader.
- the antibody titer is defined as the dilution required to change the absorbance by one unit (1 au) .
- Rabbit IgG antibodies against KLH conjugates were purified by affinity chromatography on a Protein A-Sepharose 4B column as follows. A 0.9 x 15 cm Pharmacia chromatographic column was packed with Protein A-Sepharose 4B suspension to a volume of 1 mL . The column was washed generously with a 0.01 M Na 2 HP0 4 - NaH 2 P0 4 buffer, pH 8.0 containing 0.15M NaCl (PBS) and then washed with 3-4 mL of a 0.1 M trisodium citrate buffer, pH 3.0. The column was then washed generously with PBS. 1 mL of rabbit antiserum is diluted with 1 mL PBS, and the resulting solution is slowly applied to the column.
- PBS 0.01 M Na 2 HP0 4 - NaH 2 P0 4 buffer
- the column is washed with 15 mL PBS and eluted with a 0.1 M trisodium citrate buffer, pH 3.0. Three fractions of 2.2 mL were collected in 15 -mL graduated tubes containing 0.8 mL of 1 M Tris-HCl buffer, pH 8.5. The purified rabbit IgG antibodies were stored at 4 ° C in the presence at 0.01 % sodium azide.
- Competitive antigen ELISA
- Buffers and water without additives are filtered trough 0.45 ⁇ M millipore filters and kept for one week, except the substrate buffer which was freshly prepared.
- BSA, antibodies, TweenTM 20 and horse radish peroxidase are added to buffers and water just prior to use.
- Urine samples are usually collected four hours after drinking a cup of coffee (instant or brewed with approximately 100 mg of caffeine per cup) and stored at -20°C as 1-mL aliquots in 1.5-mL microtubes.
- the urine samples are diluted with isotonic sodium phosphate buffer, pH 7.5 (310 mosM) to give concentrations of caffeine, 1.7-DMX and 1,7-DMU no higher than 3 x 10 "6 M in the microtiter plate wells.
- Wells of the ELISA plate were washed with a Nunc-Immuno wash 12 washer.
- the substrate buffer without the hydrogen peroxide and o-phenylenediamme hydrochloride is prepared (25 mM citric acid and 50 mM sodium phosphate dibasic buffer, pH 5.0).
- the microtiter plate is washed 3 times with the IPBT solution and 3 times with a 0.05% TweenTM solution and drained.
- 50 ⁇ L of hydrogen peroxide and 40 mg of o- phenylenediamme are added to the substrate buffer.
- One hundred fifty microliters (150 ⁇ L) of the substrate buffer solution is then added to each wells using a eight channel pipet (Brinkmann TransferpetteTM-8 50-200 ⁇ L) and 200 ⁇ L Flex tips (Brinkmann) .
- microtiter plate is covered and shaken for 25-30 min at room temperature and the enzymatic reaction is stopped by adding 50 ⁇ L/well a 2.5 M HCl solution using an eight channel pipet (Brinkmann TransferpetteTM-8 50-200 ⁇ L) and 200 ⁇ L Flex tips (Brinkmann) . After gently shaking for 3 min. , the absorbance is read at 490 nm with a microplate reader.
- Standard solutions of Caffeine, 1,7 -DMX and 1,7- Dimethyluric acid solutions for ELISA Prepare a 100 mL stock solution of caffeine, 1,7 -DMX and 1,7-DMU acid at concentrations of 6.00 x 10 "4 M in the 310 mosM sodium phosphate buffer, pH 7.5 (IPB) in a 100 mL volumetric flask. Stirring the solution to insure complete solubilization.
- the antibodies must have specificity for their individual caffeine metabolites, with little or no recognition of other derivatives. To ensure their selectivity an ELISA will be performed with standard solutions of the compounds listed in
- AAMU f 0 0 0 AADMU 9 0 0 0 a The number 0 indicates either an absence of inhibition or an inhibition no higher than 40% at the highest concentration tested m the ELISA (5 x 10 "3 M) ; concentrations of caffeine, 1,7 -Dimethyl Xanthine and 1, 7 -Dimethyluric acid required for 50% inhibition m the competitive antigen ELISA will be determined; b, 1,3 -Dimethyl Xanthine, theophylline; c, 1,7 -Dimethyl Xanthine, paraxanthme ; d, 3, 7 -Dimethyl Xanthine, theobromme; e, AAU, 5-acetam ⁇ do-6-ammourac ⁇ l ; f, AAMU, 5-acetam ⁇ do-6-ammo-3-methylurac ⁇ l; f, AADMU, 5- acetam ⁇ do-6-ammo-l , 3-d ⁇ methylxanth
- a competitive antigen ELISA will be developed for CYP 1A2 phenotyping using caffeine as the probe drug. Contrary to current methods used for phenotyping, the assay is sensitive, rapid and can be readily carried out on a routine basis by a technician with a minimum of training m a clinical laboratory.
- the dilutions of urine samples required for determinations of caffeine, 1,7-DMX and 1,7-DMU are a function of the sensitivity of the competitive antigen ELISA and of caffeine, 1,7-DMX and 1,7-DMU concentrations in urine samples . It is suggested to dilute the urine samples by a factor so that AAMU and IX are about 3 x 10 " 6 M in the well of the microtiter plate .
- Buffer B dissolve the content of 1 vial B/ lOOmL
- the substrate is carcinogenic. Wear surgical gloves when handling Buffer E (substrate buffer) . Each sample is determined in duplicate. An excellent pipeting technique is required. When this technique is mastered the absorbency values of duplicates should be within less than 5%. Buffers C, D, E are freshly prepared. Buffer E-H 2 0 2 is prepared just prior to pipeting in the microtiter plate wells. Preparation of samples: Prepare table 8 with a computer and print it.
- This table shows the contents of each well of a 96 well microtiter plate. Enter the name of the urine sample
- Buffer C Dissolve the content of one vial C/50 mL .
- TweenTM 20 Pipet 25 mL of TweenTM 20 in a 100 mL erlenmeyer flask containing 50 mL of water. 2.5N HCl: 41.75 mL of 12N HCl/200 mL . Store in a 250 mL glass bottle
- Caffeine-HRP conjugate Pipet 9 mL of Buffer C in a 15 mL glass test tube. Pipet 90 ⁇ L of caffeine-HRP stock solution.
- 1,7-DMX-HRP conjugate Pipet 9 mL of Buffer C in a 15 mL glass test tube. Pipet 90 ⁇ L of 1,7-DMX-HRP stock solution.
- 1,7-DMU-HRP conjugate Pipet 9 mL of the 2% BSA solution in a 15 mL glass test tube. Pipet 90 ⁇ L of 1,7- DMU-HRP stock solution. Buffer E - H 2 0 2 : Dissolve the contents of 1 vial E- substrate/50 mL water. Pipet 25 ⁇ L of a 30% H 2 0 2 solution (prepared fresh) .
- H 2 0 2 (prepared just prior to pipeting in the microtiter plate wells) . Shake for 20-30 min. at room temperature using an orbital shaker. Pipet 50 ⁇ L/well of a 2.5N HCl solution. Shake 3 min. with the orbital shaker at room temperature . Read the absorbance of the wells with a microtiter plate reader at 490 nm. Print the sheet of data and properly label .
Abstract
Description
Claims
Priority Applications (4)
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AU31388/00A AU3138800A (en) | 1999-03-15 | 2000-03-09 | Elisa kit for the determination of metabolic phenotypes |
JP2000605205A JP2002539450A (en) | 1999-03-15 | 2000-03-09 | ELISA kit for metabolic phenotyping |
CA002366085A CA2366085A1 (en) | 1999-03-15 | 2000-03-09 | Elisa kit for the determination of metabolic phenotypes |
EP00908867A EP1163518A2 (en) | 1999-03-15 | 2000-03-09 | Elisa kit for the determination of metabolic phenotypes |
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US12448899P | 1999-03-15 | 1999-03-15 | |
US60/124,488 | 1999-03-15 |
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EP (1) | EP1163518A2 (en) |
JP (1) | JP2002539450A (en) |
AU (1) | AU3138800A (en) |
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WO (1) | WO2000055624A2 (en) |
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- 2000-03-09 CA CA002366085A patent/CA2366085A1/en not_active Abandoned
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Also Published As
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WO2000055624A3 (en) | 2001-02-01 |
CA2366085A1 (en) | 2000-09-21 |
EP1163518A2 (en) | 2001-12-19 |
JP2002539450A (en) | 2002-11-19 |
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