WO1997021835A3 - Dna markers for shrimp selection - Google Patents

Dna markers for shrimp selection Download PDF

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Publication number
WO1997021835A3
WO1997021835A3 PCT/US1996/019568 US9619568W WO9721835A3 WO 1997021835 A3 WO1997021835 A3 WO 1997021835A3 US 9619568 W US9619568 W US 9619568W WO 9721835 A3 WO9721835 A3 WO 9721835A3
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WO
WIPO (PCT)
Prior art keywords
shrimp
repeated
cloned
useful
base pairs
Prior art date
Application number
PCT/US1996/019568
Other languages
French (fr)
Other versions
WO1997021835A2 (en
Inventor
Joseph C Bagshaw
Michael A Buckholt
Original Assignee
Worcester Polytech Inst
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Worcester Polytech Inst filed Critical Worcester Polytech Inst
Priority to AU16841/97A priority Critical patent/AU1684197A/en
Publication of WO1997021835A2 publication Critical patent/WO1997021835A2/en
Publication of WO1997021835A3 publication Critical patent/WO1997021835A3/en

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Farming Of Fish And Shellfish (AREA)

Abstract

Isolated DNA from Penaeus vannamei was digested with restriction enzymes, restriction fragments of genomic DNA inserted into a plasmid vector and screened for recombinant plasmids containing repeated sequences. Ten of the resulting isolates contained representatives of the same repeated element, a satellite sequence present in one or more blocks of tandemly repeated units. The cloned repeat units range in size from about 100 to 200 base pairs, more typically between about 139 to 188 base pairs. Embedded within each cloned repeat unit are 6 to 15 copies of a tandemly repeated pentanucleotide microsatellite. The genome of P. vannamei contains approximately one million copies of this satellite/microsatellite unit. The sequences are useful as markers for the selection of shrimp having a genetically-transmitted favorable growth characteristic, such as increased reproduction, enhanced growth rate, increased size, disease-resistance, and the ability to grow in colder waters, for improved aquacultured shrimp production. Hybridization of the marker to an isolated Peaneus shrimp mucleic acid molecule can be used to identify species, strains or individual shrimp having the desired characteristics. Once identified, these shrimps can be bred to shrimp having the same or an additional desired characteristic to produce a high quality, genetically superior seedstock or larvae useful for the economic production of farmed shrimp.
PCT/US1996/019568 1995-12-12 1996-12-12 Dna markers for shrimp selection WO1997021835A2 (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
AU16841/97A AU1684197A (en) 1995-12-12 1996-12-12 Dna markers for shrimp selection

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US57075195A 1995-12-12 1995-12-12
US08/570,751 1995-12-12

Publications (2)

Publication Number Publication Date
WO1997021835A2 WO1997021835A2 (en) 1997-06-19
WO1997021835A3 true WO1997021835A3 (en) 1997-07-24

Family

ID=24280914

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US1996/019568 WO1997021835A2 (en) 1995-12-12 1996-12-12 Dna markers for shrimp selection

Country Status (2)

Country Link
AU (1) AU1684197A (en)
WO (1) WO1997021835A2 (en)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2000034476A2 (en) * 1998-12-10 2000-06-15 Trustees Of Tufts College Nucleic acid molecules of shrimp
WO2007057915A1 (en) * 2005-11-21 2007-05-24 Bose Institute A micro satellite dna marker used for identifying disease resistant populations of penaeus monodon
KR101454060B1 (en) 2007-11-29 2014-10-28 몬산토 테크놀로지 엘엘씨 Meat products with increased levels of beneficial fatty acids
CN107385094A (en) * 2017-09-08 2017-11-24 中山大学 A kind of multiple PCR primer, method and application for Environment of Litopenaeus vannamei Low germplasm identification
CN107881246B (en) * 2017-12-01 2021-05-04 中国科学院南海海洋研究所 Litopenaeus vannamei EST-STR marker and amplification primer, detection method and application thereof
CN111849997B (en) * 2020-07-02 2022-09-20 中国科学院海洋研究所 Macrobrachium carinicauda compound eye development regulation gene and guide RNA as well as acquisition and application

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1994001585A1 (en) * 1992-07-14 1994-01-20 Worcester Polytechnic Institute Method of selecting genetically superior shrimp

Patent Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1994001585A1 (en) * 1992-07-14 1994-01-20 Worcester Polytechnic Institute Method of selecting genetically superior shrimp

Non-Patent Citations (12)

* Cited by examiner, † Cited by third party
Title
AQUACULTURE 127 (2-3). 1994. 131-144. ISSN: 0044-8486 *
AQUACULTURE 130 (2-3). 1995. 137-144. ISSN: 0044-8486 *
BAGSHAW ET AL.: "A novel satellite/microsatellite combination in the genome of the marine shrimp, Penaeus vannamei", GENE, vol. 184, 15 January 1997 (1997-01-15), AMSTERDAM NL, pages 211 - 214, XP002031605 *
BAGSHAW: "Repeated sequences in the genome of P. vannamei and other decapods", KEYSTONE SYMPOSIUM ON MOLECULAR APPROACHES TO MARINE ECOLOGY AND EVOLUTION, SANTA FE, NEW MEXICO, USA, 5 March 1995 (1995-03-05) - 11 March 1995 (1995-03-11), XP002031604 *
BUCKHOLT ET AL.: "A novel satellite-microsatellite in the genome of the marine shrimp Penaeus vannamei.", THIRTY-FIFTH ANNUAL MEETING OF THE AMERICAN SOCIETY FOR CELL BIOLOGY, WASHINGTON, D.C., USA, 9 December 1995 (1995-12-09) - 13 December 1995 (1995-12-13), XP000673924 *
BUCKHOLT ET AL.: "Satellite and microsatellite DNA sequence in the genome of the marine shrimp, P vannamei" *
DATABASE BIOSIS BIOSCIENCES INFORMATION SERVICE, PHILADELPHIA, PA, US; BOUCHON D ET AL: "Mitochondrial DNA variation and markers of species identity in two penaeid shrimp species: Penaeus monodon Fabricius and P. japonicus Bate.", XP002031607 *
DATABASE BIOSIS BIOSCIENCES INFORMATION SERVICE, PHILADELPHIA, PA, US; GARCIA D K ET AL: "RAPD markers of potential use in penaeid prawn ( Penaeus monodon) breeding programs.", XP002031608 *
DATABASE EMBL European Molecular Biology Lab.; 14 November 1994 (1994-11-14), XP002031606 *
GARCIA ET AL.: "Molecular analysis of a RAPD marke(B20) reveals two microsatellites and differential mRNA expression in Penaeus vannamei.", MOLECULAR MARINE BIOLOGY AND BIOTECHNOLOGY, vol. 5, no. 1, March 1996 (1996-03-01), pages 71 - 83, XP000673936 *
JOURNAL OF CELLULAR BIOCHEMISTRY SUPPLEMENT 0 (19B). 1995. 344 *
MOLECULAR BIOLOGY OF THE CELL 6 (SUPPL.). 1995. 303A. *

Also Published As

Publication number Publication date
AU1684197A (en) 1997-07-03
WO1997021835A2 (en) 1997-06-19

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