WO1996008560A1 - Transduction of genes into human hematopoietic stem cells using recombinant adeno-associated viral vectors - Google Patents

Transduction of genes into human hematopoietic stem cells using recombinant adeno-associated viral vectors Download PDF

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WO1996008560A1
WO1996008560A1 PCT/US1995/011858 US9511858W WO9608560A1 WO 1996008560 A1 WO1996008560 A1 WO 1996008560A1 US 9511858 W US9511858 W US 9511858W WO 9608560 A1 WO9608560 A1 WO 9608560A1
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adeno
globin
cells
semi
gene product
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PCT/US1995/011858
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Tim M. Townes
Josef T. Prchal
Marian Luhovy
Steven L. Mccune
Jaroslav F. Prchal
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The Uab Research Foundation
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/63Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
    • C12N15/79Vectors or expression systems specially adapted for eukaryotic hosts
    • C12N15/85Vectors or expression systems specially adapted for eukaryotic hosts for animal cells
    • C12N15/86Viral vectors
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K47/00Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient
    • A61K47/50Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates
    • A61K47/69Medicinal preparations characterised by the non-active ingredients used, e.g. carriers or inert additives; Targeting or modifying agents chemically bound to the active ingredient the non-active ingredient being chemically bound to the active ingredient, e.g. polymer-drug conjugates the conjugate being characterised by physical or galenical forms, e.g. emulsion, particle, inclusion complex, stent or kit
    • A61K47/6901Conjugates being cells, cell fragments, viruses, ghosts, red blood cells or viral vectors
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K38/00Medicinal preparations containing peptides
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K48/00Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/795Porphyrin- or corrin-ring-containing peptides
    • C07K14/805Haemoglobins; Myoglobins
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N2750/00MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA ssDNA viruses
    • C12N2750/00011Details
    • C12N2750/14011Parvoviridae
    • C12N2750/14111Dependovirus, e.g. adenoassociated viruses
    • C12N2750/14141Use of virus, viral particle or viral elements as a vector
    • C12N2750/14143Use of virus, viral particle or viral elements as a vector viral genome or elements thereof as genetic vector

Definitions

  • BagKqrQvmd. of the invention This invention relates to gene therapy of diseases of hematopoietic cells.
  • Hematopoietic stem cells have two unique characteristics. First, they are pluripotent; that is, they are capable of differentiating into all mature blood cell types. Second, they are self-renewing; that is, they are capable of dividing and maintaining their pluripotentiality. Hematopoietic stem cells were first characterized by Dexter and his group (Dexter and Spencer, Ann. Rev. Cell Biol. 3:423-441, 1987). Subsequently, many other investigators have contributed to the understanding of their developmental potential, functional characteristics, and requirements for maintenance in culture (see, e.g., Dexter and Spencer, Ann. Rev. Cell Biol.
  • Fig. 1 illustrates the pluripotent, hematopoietic stem cell and various myeloid and lymphoid lineages that are derived from this cell (Stamatoyannopoulos et al., The Molecular Basis of Blood Diseases. (Philadelphia; .B. Saunders Company) 88:108- 109, 1994).
  • the invention features a method of treating a disease of hematopoietic cells in a mammal involving introducing into the mammal hematopoietic cells, e.g., hematopoietic stem cells, containing an AAV vector containing a nucleic acid encoding a gene product capable of alleviating symptoms of the disease.
  • hematopoietic cells blood cells, including hematopoietic stem cells, and cells derived therefrom, including, without limitation, common lymphoid progenitor cells, T cells (e.g., helper, cytotoxic, and suppressor cells) , B cells, plasma cells, natural killer cells, common myeloid progenitor cells, monocytes, macrophages, mast cells, leukocytes, basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes.
  • T cells e.g., helper, cytotoxic, and suppressor cells
  • B cells plasma cells
  • natural killer cells common myeloid progenitor cells
  • monocytes e.g., monocytes, macrophages, mast cells
  • leukocytes e.g., basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes.
  • disease of a hematopoietic cell is meant any condition characterized by impairment of any normal function of a hematopoietic cell.
  • the diseases of hematopoietic cells that can be treated according to the method of the invention include genetic diseases (e.g., Adenosine Deaminase Deficiency, Fanconis' Anemia, and hemoglobinopathies, such as Sickle Cell Anemia, Thalassemias, and Hemoglobin C Disease) , as well as diseases acquired by infectious or non-infectious means (e.g., Acquired Immune Deficiency Syndrome and leukemias) .
  • genetic diseases e.g., Adenosine Deaminase Deficiency, Fanconis' Anemia, and hemoglobinopathies, such as Sickle Cell Anemia, Thalassemias, and Hemoglobin C Disease
  • diseases acquired by infectious or non-infectious means e.g., Acquired Immune Deficiency Syndrome and leuk
  • vector is meant a replicable nucleic acid construct.
  • An "adeno-associated viral vector” is a vector containing AAV inverted terminal repeats (iTRs) , and any modified versions thereof.
  • AAV vectors are described in general by Kotin et al. (Kotin et al., Proc. Natl. Acad. Sci. USA 87:2211-2215, 1990). Specific examples of AAV vectors are given below.
  • Appropriate regulatory sequences, such as enhancers and promoters are inserted into the vectors of the invention using standard methods known to those skilled in the art, for example, by homologous recombination (Graham et al., J. Gen. Virol.
  • Promoters are inserted into the vectors so that they are operably linked 5' to the nucleic acid sequence encoding the gene product.
  • operably linked is meant that a gene and a regulatory sequence, such as a promoter and/or enhancer, are connected in such a way as to permit gene expression when the appropriate molecules (e.g., transcriptional activator proteins) are bound to the regulatory sequence(s).
  • promoter is meant a minimal sequence sufficient to direct transcription.
  • Any promoter that is capable of directing initiation of transcription in a eukaryotic hematopoietic cell may be used in the invention.
  • general promoters such as the cytomegalovirus promoter may be used.
  • hematopoietic cell type-specific promoters e.g., globin promoters, may be used.
  • Gene product is meant a molecule that is produced as a result of transcription of a gene.
  • Gene products include RNA molecules transcribed from a gene, as well as proteins encoded by RNA transcribed from a gene.
  • Protein gene products that are included in the invention include, but are not limited to, anti-sickling hemoglobins, >9-globin, fetal ⁇ -globin, Fanconis' Anemia complementation gene products (e.g., the Fanconis' Anemia C gene), and adenosine deaminase.
  • RNA gene products included in the invention include RNAs that are antisense to target RNAs.
  • antisense describes the interaction of an RNA gene product with a nucleic acid target in a cell in a sequence-specific manner, more particularly, the interaction of the RNA gene product with complementary target RNA sequences, resulting in inhibition of transcription or translation of the target RNA.
  • the nucleic acid target may be a cellular nucleic acid or a nucleic acid derived from a pathogen (e.g., a virus, such as HIV) that has infected the cell.
  • the antisense RNA is antisense to HIV RNA.
  • the RNA gene product may also be a ribozyme that cleaves a target RNA which, as described above, may be a cellular nucleic acid or a nucleic acid derived from a pathogen (e.g., HIV) that has infected the cell.
  • a pathogen e.g., HIV
  • the gene product is a ribozyme that cleaves HIV RNA.
  • the invention features a hematopoietic stem cell containing an AAV vector containing a nucleic acid encoding a gene product capable of alleviating symptoms of a disease of hematopoietic cells.
  • the gene products contained in the hematopoietic stem cells of the invention include, but are not limited to, an anti-sickling hemoglobin, / 9-globin, fetal ⁇ - globin, adenosine deaminase, the Fanconis' Anemia C gene product, RNA that is antisense to HIV RNA, or a ribozyme that cleaves HIV RNA.
  • Mammals that can be treated using the methods of the invention include, but are not limited to, humans, cows, dogs, cats, sheep, goats, rabbits, rats, guinea pigs, hamsters, and mice.
  • the invention features an adeno-associated viral vector made in a semi-packaging cell line, and containing a nucleic acid encoding a therapeutic gene product, for use in therapy.
  • the invention features a hematopoietic cell (e.g., a hematopoietic stem cell) containing an adeno-associated viral vector made in a semi-packaging cell line, and containing a nucleic acid encoding a therapeutic gene product, for use in therapy.
  • the invention features the use of an adeno-associated viral vector for the preparation of a medicament for use in therapy for a disease of hematopoietic cells in a mammal.
  • the viral vector is made in a semi-packaging cell line and contains a nucleic acid encoding a gene product capable of alleviating a symptom of the disease.
  • the invention features a hematopoietic cell containing an adeno-associated viral vector for use in therapy for a disease of hematopoietic cells in a mammal.
  • the adeno-associated viral vector is made in a semi-packaging cell line and contains a nucleic acid encoding a gene product capable of alleviating a symptom of the disease.
  • the adeno-associated viral vectors used in the invention may be produced from the semi-packaging cell line at a titer of at least 10 7 or 10 8 plaque-forming units/milliliter.
  • the semi-packaging cell line may contain the rep or cap genes of adeno-associated virus on an episomal vector.
  • AAV vectors in gene therapy methods include (1) AAV are completely non- pathogenic, (2) AAV have a broad host range, (3) AAV particles can be concentrated to titers of 10 9 , (4) AAV inverted terminal repeats (ITRs) do not contain enhancers that can activate host genes (e.g., oncogenes) upon viral insertion, and (5) AAV are capable of infecting quiescent cells.
  • ITRs inverted terminal repeats
  • FIG. 1 is an illustration of the pathways of differentiation of hematopoietic stem cells.
  • Figs. 2A and 2B are schematic representations of pEBAVrc and pEBAVcmv/lac vectors, respectively.
  • Fig. 3 is agarose gel analysis of PCR reactions containing DNA extracted from twenty two separate BFU-E (burst-forming units-erythroid) which differentiated from hematopoietic stem cells transfected with pEBAVcmv/lac that were taken from a homozygous sickle cell patient .
  • Fig. 4 is an illustration of 5' HS 1-5 ⁇ l and HS 1-5 >9 AS constructs. One hundred kilobases of the human ⁇ - globin locus and 35 kilobases of the human ⁇ -globin locus are illustrated.
  • Cos ids containing HS 1-5 ⁇ l and HS 1-5 3 AS were constructed by fusing either the ⁇ l gene or a recombinant anti-sickling /3-globin gene downstream of the ⁇ -globin locus control region (LCR) .
  • the 26 kb inserts were purified from vector sequences, mixed at a 1:1 molar ratio (final DNA concentration was 2 ng/ ⁇ l) , and co- injected into fertilized mouse eggs.
  • Transgenic lines displaying high-level, balanced expression of the transgenes were established.
  • Figs. 5A-5D are graphs of chromatographs of hemolysates and HPLC-purified anti-sickling hemoglobins.
  • Fig. 5A is a graph of a chromatograph of hemolysate obtained from transgenic mice expressing Hb AS1. Hemoglobins were separated by non-denaturing HPLC. Twenty eight percent of the hemoglobin in erythrocytes of these animals is recombinant human ⁇ / 3 AS1 .
  • Fig. 5B is a graph of denaturing HPLC analysis of ⁇ j8 AS1 purified from the hemolysate shown in Fig. 5A. Purification was performed by preparative isoelectric focusing (IEF) .
  • IEF isoelectric focusing
  • Fig. 5C is a graph of a chromatograph of hemolysate obtained from transgenic mice expressing Hb AS2. Hemoglobins were separated by non-denaturing HPLC. O 96/08560 PC17US95/11858
  • Fig. 5D is a graph of denaturing HPLC analysis of a ⁇ 9 ⁇ 2 purified from the hemolysate shown in Fig. 5C. Purification was performed by preparative IEF. This hemoglobin lacks any contaminating urine globins. Hemoglobins purified by preparative IEF were used in all subsequent experiments.
  • Figs. 6A-6D are oxygen equilibrium curves (OECs) for purified human anti-sickling hemoglobins.
  • Fig. 6A is an OEC curve for Hb AS1 at pH 7.0 in 0.1 M potassium phosphate (KP0 4 ) buffer at 20 ⁇ C.
  • Fig. 6B is an OEC curve for Hb AS1 under the same conditions as those described in Fig. 6A, with the addition of 2 mM 2,3- diphosphoglycerate (DPG) .
  • Fig. 6C is an OEC curve for Hb AS2 at pH 7.0 in 0.1 M KP0 4 buffer at 20°C.
  • Fig. 6D is an OEC curve for Hb AS2 under the same conditions as those described in Fig. 6C with the addition of 2 mM 2,3- DPG.
  • Figs. 7A-7B are graphs showing polymerization delay times for deoxygenated mixtures of human hemoglobins.
  • Fig. 7A shows delay times for hemoglobin mixtures containing 100% Hb S or 75% Hb S, together with 25% Hb A, Hb AS1, Hb AS2, or Hb F. Curves were determined at a hemoglobin concentration of 60 mg/dl using the temperature jump method (Adachi et al., J. Biol. Chem. 254:7765, 1979).
  • the delay time is an indication of the ability of a hemoglobin to disrupt the polymerization of Hb S.
  • the delay time of Hb AS1 is between that of Hb A and Hb F, while the delay time of Hb AS2 is similar to that of Hb F at this hemoglobin concentration.
  • Fig. 7B shows delay time vs. hemoglobin concentration. The progression of the plots from left to right demonstrates the increased Hb concentrations which are required for polymerization to occur in the presence of the various non-S hemoglobins. The delay time plots for Hb AS2 and Hb F overlap, indicating that the anti- polymerization activities of Hb AS2 and Hb F are virtually identical.
  • Fig. 8 is an illustration of a retroviral vector useful for the production of anti-sickling hemoglobin.
  • Hematopoietic stem cells differentiate into a large number of different cells (Fig. 1) , including common lymphoid progenitor cells, T cells (e.g., T-helper cells, cytotoxic T cells, and suppressor T cells) , B cells, plasma cells, natural killer cells, common myeloid progenitor cells, monocytes, macrophages, mast cells, leukocytes, basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes.
  • T cells e.g., T-helper cells, cytotoxic T cells, and suppressor T cells
  • B cells plasma cells
  • natural killer cells common myeloid progenitor cells
  • monocytes e.g., monocytes, macrophages, mast cells
  • leukocytes e.g., basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes.
  • any disease that can be treated by the expression of a transgene in any of these cells can be treated using the methods of the present invention.
  • hemoglobinopathies such as / 3-thalassemia and sickle cell anemia
  • ⁇ -globin gene Kerlsson et al., Ann. Rev. Biochem. 54:1071- 1108, 1985, and references therein
  • ⁇ -thalassemia can be treated by using the ⁇ -globin gene.
  • Sickle cell anemia can also be treated by using an anti-sickling hemoglobin gene (see below) or a ⁇ -globin gene.
  • Fanconis' anemia can be treated using the Fanconis' C gene, or genes from other Fanconis complementation groups (dos Santos et al., Stem Cells 12:142-153, 1994). Further, adenosine deaminase deficiency (ADA) can be treated by using the adenosine deaminase gene (Blaese et al., Hum. Gene Ther. 4:521-7, 1993); and acquired immune deficiency syndrome (AIDS) can be treated by using anti ⁇ sense or ribozyme sequences designed to inhibit HIV replication (Tsuchuhashi et al.. Science 262:99-102, 1993; Lisziewicz et al., Proc. Natl. Acad. Sci. USA 90:8000-4, 1993) in the methods of the invention.
  • ADA adenosine deaminase deficiency
  • AIDS acquired immune deficiency syndrome
  • AAV vectors are vectors that contain AAV inverted terminal repeats (ITRs) .
  • AAV belongs to the genus Dependovirus (family parvoviridae) , and is also known as adenosatellite and dependovirus. These viruses are antigenically unrelated to adenovirus, but require the presence of adenovirus in order to replicate. There are at least four serotypes, all sharing common antigens.
  • Dependoviruses are characterized in that they (1) are small and containing single-stranded DNA, (2) have virions of 18 to 26 nm in diameter, (3) are not enveloped, (4) are ether-resistant, (5) have capsids with cubic symmetry (with 32 capsomeres) , and (6) their replication and assembly occur in the nucleus of infected cells.
  • telomeres are shortened into the vectors of the present invention using standard methods in the art (see, e.g., Molecular Cloning: A Laboratory Manual, Sambrook et al., eds. Cold Spring Harbor Laboratory, 2nd Edition, Cold Spring Harbor, New York, 1989) .
  • Any promoter that is sufficient to direct the initiation of transcription in a hematopoietic cell may be used in the invention.
  • a preferred non-tissue specific promoter is the cytomegalovirus (CMV) promoter (DeBernardi et al., Proc. Natl. Acad. Sci. USA 88:9257-9261, 1991, and references therein).
  • CMV cytomegalovirus
  • hematopoietic cell-type specific promoter may also be used in the invention.
  • globin promoters such as the 0-globin promoter (Karlsson et al., Ann. Rev. Biochem. 54:1071-1108, 1985, and references therein) may be used.
  • the hematopoietic stem cells are obtained from the patient into which the stem cells are to be transplanted after AAV-infection.
  • Hematopoietic stem cells are obtained from patients and, after infection by AAV vectors, are introduced into patients using standard methods in the art (see, e.g., United States Patent
  • the most stringent experimental criterion for hematopoietic stem cells is the ability of these cells to reconstitute the entire blood system of a lethally irradiated animal. This experiment obviously cannot be carried out in humans and therefore other assays have been developed to demonstrate the pluripotentiality and self-renewing characteristics of human hematopoietic stem cells.
  • the most widely accepted assay for human hematopoietic stem cells is the Long Term Culture- Initiating Cell (LTC-IC) assay, which involves culturing bone marrow cells for 5 weeks and then analyzing the developmental potential of surviving cells by plating these cells in semi-solid medium (Eaves et al., J. Tiss. Cult. Meth. 13:55-62, 1991). After 14 days in semi-solid medium, colonies of all cell lineages are detectable if pluripotent, self-renewing cells were present when the long term culture was initiated.
  • LTC-IC Long Term Culture- Initiating Cell
  • the LTC-IC assay has been used to demonstrate that retroviral vectors are capable of transducing genes into human hematopoietic stem cells (Hughes et al., J. Clin. Invest. 89:1817-1824, 1992).
  • AAV vectors which, as described above, have several advantages for use in gene therapy, have not been previously tested in this system.
  • the receptor for AAV is not known; therefore, it was impossible to predict whether the virus would infect hematopoietic stem cells.
  • the "semi- packaging" cell line was established with a silent episomal vector (pEBAVrc; Fig. 2A) .
  • This vector contains an EBV replication origin and an EBNA1 gene.
  • the rep-cap genes of AAV are inserted into the vector with their natural control elements; therefore, these genes are activated only in the presence of adenovirus early gene products.
  • This arrangement provides a switch-system to regulate the expression of the rep gene, which has been found to have a cytostatic effect.
  • the vector also contains a hygromycin resistance gene to provide selection for cells that contain the vector.
  • the plasmid sequences of the vector contain an ampicillin resistance gene and a bacterial replication origin for replicating the DNA in bacteria.
  • the AAV vector containing the lacZ gene was inserted into a similar vector, pEBAVcmv/lac (Fig. 2B) .
  • This vector contains a CMV immediate-early transcriptional cassette containing the lacZ gene which is flanked by the two ITR sequences of AAV.
  • HeLa cells in 100 mm culture dishes were transfected with pEBAVrc. HeLa cells were seeded 24 hours prior to transfection, and allowed to reach 50-70% confluence at the time of transfection. Cells were washed once with serum-free DMEM (Gibco) . After removal of the medium, 8 ml of DMEM containing 10% fetal calf serum was added to the culture on the next day. At 12 hours after this medium change, cells were trypsinized and passed to three 100 mm dishes in DMEM containing 10% fetal calf serum and 270 u/ml of Hygromcyin (Sigma) . Special care should be taken to allow cells to settle at the bottom of the plate individually. Cells were selected with hygromycin for 10 to 15 days when individual colonies began to grow.
  • Colonies from 3 to 4 dishes were trypsinized and pooled into one 100 mm dish. Cells were kept at 60-70% confluence in medium containing 200 u/ml of hygromycin. When 90% confluence was reached cells were transferred into four 100 mm dishes in DMEM containing 10% DMEM without hygromycin. At 24 hours post-seeding, each 100 mm dish of cells was transfected with 5 ⁇ g each of pEBAVrc and pEBAVcmv/lac. At 3 hours after the addition of the transfection medium, wild-type adenovirus (HuAd5) was added to the cells at an MOI of 10, without removal of the transfection medium.
  • HuAd5 wild-type adenovirus
  • the medium was changed to DMEM containing 5% fetal calf serum and incubated for three days or until most of the cells showed cytopathic effects. All of the media except 1 ml was removed from each 100 mm dish. Cells were scraped off the plate and transferred into a 10 ml screw-cap tube. This viral lysate was stored at - 100°C until further treatment.
  • the viral lysate was thawed on ice, and sonicated for 10-15 minutes with pulse ultrasound. The tube was put back on ice periodically to prevent the sample from heating up. The viral lysate was then spun at 15,000 rp for 10 minutes in a JL-20 centrifuge (Beckman) . The supernatant was removed and aliquoted into freezing wells of 10 ml each and stored at -100°C. For infecting of hematopoietic stem cells, it was not necessary to remove or inactivate the adenovirus since stem cells lack receptor for adenovirus. For infection of cells that are susceptible to adenovirus infection, adenovirus should be removed by chromatography, of CsCl gradient centrifugation.
  • the titer of the virus was determined by the rate of transduction of HeLa cells with the lacZ gene.
  • One, two, and three ml of the viral stock were used to infect HeLa cells in 24-well plates. At 24 hours post infection, the cells were fixed with 0.1% glucoraldehyde at 4°C for 2 min, and washed thoroughly with DMEM. Cells were then stained with 0.3% X-gal with standard procedures. Percentages of the cells that stained blue were determined by light microscopy. There were 2 x 10 5 HeLa cells in each well and one half of the cells (1 x 10 5 ) stained blue. Therefore, the viral titer was at least 10 8 /ml.
  • the transfection procedure was as follows. For each 100 mm dish, 8-10 ⁇ g DNA was dissolved in 2 ml of DMEM or transfection medium from BRL. 90-100 ⁇ l of lipofectamine (BRL) was suspended in 2 ml of DMEM. The lipid containing medium was mixed with the DNA containing medium slowly and dropwise, while the tube was gently rotated. After mixing well by gently rotating the tube, the transfection mixture was incubated for 30 minutes at room temperature. The mixture was then diluted with DMEM to a total volume of 8 ml. The mixture was then added to the cells, which had been washed once or twice with DMEM without serum. Care should be taken to not allow the cells to dry between each wash. Purification of human hematopoietic stem cells
  • Bone marrow was obtained from individuals following the IRB approved protocol. Mononuclear cells were purified using density gradient centrifugation using standard procedures. The mononuclear bone marrow cells were isolated by Ficoll/Hypaque density gradient centrifugation (average yield 1-2 x 10 8 cells) . The recent development of magnetic activated cell sorting (MACS) allowed for rapid enrichment of CD34+ cells (Kato and Radbruch, Cytometry 14:384-392, 1993). The cells were labeled with anti-CD34+ antibodies that were conjugated with magnetic particles and run through the magnetic separation column from Miltenyi Biotec (Sunnyvale, CA) .
  • MCS magnetic activated cell sorting
  • CD34+ cells were further enriched by selecting for and against various surface molecules according to principles outlined by Baum et al. (Proc. Natl. Acad. Sci. USA 89:2804-2808, 1992).
  • the progenitors were labeled with FITC conjugated antibody that recognizes a different CD34+ epitope than the magnetic bead conjugated anti-CD34 antibody.
  • Lin- cells are isolated by a negative selection using a cocktail of PE labeled antibodies that recognize myeloid, B cells, T cells, and NK cell markers (CD 2, CD 14, CD 19, CD 56).
  • Thy+ cells were isolated by positive selection with biotinylated, anti-human Thy mouse monoclonal antibody that was labeled with steptavidin-conjugated, Texas red dye. Infection of hematopoietic stem cells
  • the molecular basis for sickle cell disease is an A to T transversion in the 6 th codon of the human ,9-globin gene. This simple transversion changes a polar glutamic acid residue to a non-polar valine (Ingram et al.. Nature 178:792, 1956; Ingram et al.. Nature 180:326, 1957) in the / 9-globin polypeptide and, thus, drastically decreases the solubility of this hemoglobin (termed Hb S) .
  • the ensuing disease is characterized by a chronic hemolytic anemia, episodes of severe pain, and tissue damage that can result in stroke, kidney failure, heart disease, infection, and other complications (Bunn et al., Hemoglobin: Molecular. Genetic, and Clinical Aspects. (W. B. Saunders, Philadelphia, 1986)).
  • Recombinant hemoglobins which contain anti- sickling mutations can be used to inhibit Hb S polymerization, and thus facilitate gene therapy of sickle cell anemia.
  • the glutamic acid to valine change at the 6 th position of the ⁇ B polypeptide creates a non- polar surface that readily interacts with a natural hydrophobic pocket in the ⁇ chain of a second tetramer. This natural pocket is formed primarily by phenylalanine (phe) at position 85 and leucine (leu) at position 88. This interaction leads to the formation of the complex 14-stranded fibers described above (Bunn et al.,
  • Hemoglobin Molecular. Genetic, and Clinical Aspects. 1986, W.B. Saunders, Philadelphia) .
  • the structure of the fiber that forms in sickle erythrocytes was derived from X-ray diffraction studies of Hb S crystals (Edelstein, J. Mol. Biol. 150:557, 1981).
  • Hb S tetramers are composed of two ⁇ -globin subunits ( ⁇ 2 ) and two >9 s -globin subunits ( ⁇ a 2 ) i and form the characteristic double-stranded fibers.
  • Hb S polymerization involves making a ,987 threonine (thr) to glutamine (gin) substitution that disrupts the hydrophobic pocket, without inhibiting ,9-globin function (Perutz et al.. Nature 219:902-909, 1968).
  • the long side chain of glutamine prevents the ,96 Val from interacting with the hydrophobic pocket.
  • Human ⁇ - and ⁇ "-globin polypeptides both have such a glutamine at position 87, and both Hb F ( ⁇ 2 ⁇ ) and Hb A2 ( ⁇ 2 «S 2 ) have potent anti- sickling activity (Nagel et al., Proc. Natl. Acad.
  • Hb D Ibadan Another naturally occurring human hemoglobin, designated Hb D Ibadan, also has anti- sickling activity (Watson-Williams et al.. Nature 205:1273, 1965). This hemoglobin has a lysine at position 87 and its long side chain also projects across the hydrophobic pocket and inhibits interactions with the ,96 Val.
  • the mutations described above are combined with a second mutation which interferes with an axial contact.
  • the side chains of the amino acids lysine-17 (lys) , asparagine-19 (asn) , and glutamic acid-22 (glu) project to form a surface which stabilizes the axial contact with another sickle hemoglobin tetramer (Dickerson et al.. Hemoglobin: Structure. Function. Evolution, and Pathology. (Benjamin/Cummings, Menlo Park, CA, 1983)).
  • amino acid 22 can be mutated from glutamic acid to alanine (ala) without an alteration in hemoglobin function (Bowman et al.. Biochemical and Biophysical Research Communications 26(4) :466-470, 1967; Bunn et al.. Hemoglobin: Molecular. Genetic, and Clinical Aspects. (W.B. Saunders, Philadelphia, 1986)).
  • the negative charge of the glutamic acid side chain at this position plays a key role in stabilizing the axial contact because it interacts with the positively charged imidazole group of a histidine at position 20 in the ⁇ chain of the neighboring tetramer.
  • Hb AS2 contains a glutamine at position 87 together with an alanine at position 22.
  • Hb AS1 has the same 022 alanine and asparagine at 080 is replaced by lysine. This 080 lysine significantly inhibits sickling when present as a single site mutation in Hb A (Nagel et al.. Nature 283:832, 1980).
  • the following 27-mer oligos were used for mutagenesis at the indicated amino acids in 0-gl ⁇ bin: 022, GTGAACGTGGATGCCGTTGGTGGTGAG (SEQ ID NO: 1); 080, GCTCACCTGGACAAGCTCAAGGGCACC (SEQ ID NO: 2); 087, GGCACCrTTTGCCCAGCTGAGTGAGCTG (SEQ ID NO: 3).
  • Another anti-sickling mutation in the human 0- globin gene useful in the invention is the Hb G Szuhu mutation, a 080 asn to lys mutation which has significant anti-sickling activity (Nagel et al., Proc. Natl. Acad. Sci. USA 76(2) :670-672, 1979), but which does not impair hemoglobin function (Kaufman et al., Human Heredity 25:60-68, 1975).
  • This mutation is preferably combined with the 022 glu to ala mutation described above.
  • an ⁇ -globin mutation may be utilized to inhibit Hb S polymerization.
  • Hb Montgomery Bovine et al., Biochim. Biophys. Acta. 379(1) :28-32, 1975
  • Hb Montgomery contains an ⁇ 48 leucine to arginine mutation.
  • the 54 year old patient from which this mutation was isolated was homozygous for 0 s , but had no history of painful sickle cell crises, jaundice, leg ulcers, or stroke, and was only mildly anemic (Prchal et al., Am. J. Med. 86(2) :232-236, 1989).
  • Anti-sickling hemoglobin AS3 combines the mutations at 022 and 087, which are present in anti- sickling hemoglobin AS2, with an additional mutation which lowers the oxygen affinity of the recombinant hemoglobin.
  • the goal is to produce an anti-sickling hemoglobin which delivers oxygen to tissues prior to sickle hemoglobin (Hb S) .
  • Hb S sickle hemoglobin
  • the mutation which was selected to lower the oxygen affinity of the anti-sickling hemoglobin is a change from asparagine to lysine at position 108 of the -globin chain.
  • Hb AS3 has the following three mutations: (1) 022 glutamic acid to alanine, (2) 087 threonine to glutamine, and (3) 0108 asparagine to lysine.
  • Anti-sickling hemoglobins Hbs AS4 and AS5 combine the mutations present in AS2 with a mutation which increases the negative charge on the 0-globin subunit.
  • Hb AS4 has the following three mutations: (1) 022 glutamic acid to alanine, (2) 087 threonine to glutamine, and (3) 095 lysine to glutamic acid.
  • Hb J-Baltimore An additional mutation which occurs naturally and which is known to increase the ability of the 0-globin subunit to compete for the ⁇ -globin subunit is known as Hb J-Baltimore.
  • This mutation consists of a change from glycine to aspartic acid at position 16 of the 0-globin subunit. While this mutation adds only one additional negative charge to the 0-globin chain (compared to the two negative charges added by the N-Baltimore mutation described above) , the location of the negative charge is significant. In fact, Hb J-Baltimore competes even more effectively than Hb N-Baltimore for the ⁇ -globin subunit.
  • Hb AS5 has the following three mutations: (1) 016 glycine to aspartic acid, (2) 022 glutamic acid to alanine, and (3) 087 threonine to glutamine.
  • the invention includes the use of anti-sickling hemoglobins that contain any combinations of the individual mutations described above.
  • the 0108, 095, and 016 mutations may occur either alone, in combination with the 022 mutation, or in combination with the 022 mutation and either the 080 or either of the above-described 087 mutations.
  • Mutations may be introduced into the normal human ⁇ - and 0-globin genes by site-directed mutagenesis. For example, a 3.8 kb Bglll-EcoRI fragment containing the human ⁇ -globin gene or a 4.1 kb Hpal-Xbal fragment containing the human 0-globin gene may be cloned into the pSELECT plasmid (Lewis et al., Nucl. Acids. Res.
  • an oligonucleotide which corrects a mutation in the ampicillin resistance gene in the pSELECT plasmid is used simultaneously with one or more oligonucleotides designed to create mutations in the globin gene insert.
  • E. coli (JM109; ATCC# 53323) containing the pSELECT plasmid with globin gene inserts are infected with helper phage (M13K07) . After growing the culture overnight (about 12-16 hours) , phage obtained from the supernatant are extracted with phenol:chloroform, and single-stranded DNA is isolated by standard methods.
  • Oligonucleotides containing each of the mutations are annealed to single-stranded DNA together with the wild- type ampicillin oligonucleotide, and these primers are extended with Klenow for about 90 minutes at 37°C.
  • Double-stranded DNA is transformed into E. coli (BMH 71- 18 mutS) , and the culture is grown overnight in L- broth containing 75 ⁇ g/ml ampicillin. DNA obtained from rapid lysis preparations of these cultures is transfected into E. coli (JM109) , and colonies are selected on ampicillin plates (75 ⁇ g/ml) . Double-stranded DNA obtained from rapid lysis preparations of these colonies is sequenced (Sanger et al., Proc. Natl. Acad. Sci. USA 74:5463-5467, 1977) using oligonucleotide primers located upstream of the mutagenic oligonucleotides. Mutants are clearly identified by comparison to wild-type sequence.
  • the DNA constructs used for microinjection to produce transgenic animals are shown in Fig. 4, and were prepared as described by Behringer et al. (Science 245:971, 1989), except that the gene for sickle hemoglobin is replaced with genes encoding anti-sickling hemoglobins. Mutations are introduced into the human 0- globin gene by site-specific mutagenesis, as described above, and the mutant sequences are inserted downstream of a 22 kb DNA fragment containing the DNAse hypersensitive sites 1-5 (5' HS 1-5) of the 0-globin LCR (Lewis et al., Nucleic Acids Res. 18:3439, 1990), as described in further detail below.
  • mutant genes are excised from pSELECT plasmids and subcloned into "right arm" plasmids containing a Cos site. Specifically, a 1.2 kb Ncol-Xbal fragment from the ⁇ -globin pSELECT plasmids and a 1.4 kb Clal-BamHI fragment from the 0-globin pSELECT plasmids are inserted into right arm plasmids in place of the corresponding ⁇ - and 0-globin gene wild-type fragments.
  • the ⁇ -globin right arm plasmids are digested with Clal and Mlul, and 4.8 kb fragments containing mutant ⁇ -globin genes which are linked to Cos sites are purified by agarose gel electrophoresis.
  • the 0-globin right arm plasmids are digested with Clal and Hindlll, and 6.5 kb fragments containing mutant 0-globin genes which are linked to Cos sites are purified similarly. Cosmids containing these fragments are constructed in four way ligations (Ryan et al.. Genes Dev. 3:314-323, 1989).
  • the left arms are 9.0 kb Mlul-Sall fragments obtained from the cosmid vector pCVOOl (Lau et al., Proc. Natl. Acad. Sci. U.S.A. 80:5225-5229, 1983).
  • This fragment contains a Cos site, an ampicillin resistance gene, a ColEl origin and the SVneo gene.
  • the two internal fragments are a 10.7 kb Sall-Kpnl fragment containing DNase I super-hypersensitive (HS) sites V, IV and III, and a 10.9 kb KpnI-Clal fragment containing HS II and I.
  • the four fragments are ligated together in a 2:1:1:2 molar ratio of vector arms to inserts and packaged (Packagene; Promega, Madison, WI) .
  • E. coli ED8767 is infected with the packaged cosmids and is plated onto ampicillin plates. Large scale cultures of ampicillin resistant colonies are grown, and cosmids are prepared by standard procedures.
  • Cosmid DNA is prepared by standard procedures. HS I-V ⁇ and HS I-V 0 cosmids containing the mutations described above are either injected directly into fertilized mouse eggs, or the constructs are digested with Sail and insert DNA is separated from plasmid DNA by agarose gel electrophoresis prior to injection. The injected eggs and transferred to pseudopregnant foster mothers (Brinster et al., Proc. Natl. Acad. Sci. USA 82:4438-4442, 1985), and transgenic progeny are identified by Southern blot hybridization of tail DNA.
  • large animal eggs can be injected with the same constructs and transferred to foster mothers as described by Pursel et al. (Science 244:1281- 1288, 1989).
  • human ⁇ - and 0-globin genes are cloned into expression vectors designed to direct high levels of ⁇ - and 0-globin synthesis in erythroid cells of transgenic animals. These constructs are co-injected into fertilized mouse eggs and expression is analyzed in transgenic animals that develop.
  • Blood collected from transgenic animals is washed with saline, and hemolysates prepared as described by Ryan et al. (Science 245:971-973, 1990). Hemoglobin is analyzed on isoelectric focusing (IEF) gels (Ryan et al. , Science 245:971-973, 1990) to demonstrate that a complete human hemoglobin is formed in adult erythrocytes, and to identify transgenic animals which synthesize high levels of human hemoglobin (Ryan et al.. Science 247:566, 1990; Behringer et al.. Science 245:971, 1989).
  • IEF isoelectric focusing
  • Human hemoglobin bands are excised from IEF gels and analyzed on urea cellulose acetate strips to demonstrate that the human hemoglobin band is composed of human ⁇ - and 0- globin polypeptides. It is noted that if human hemoglobin is difficult to separate from endogenous hemoglobins, mutations that increase or decrease the isoelectric point (pi) of human hemoglobin can be introduced into the ⁇ - and 0-globin genes. Increases in pi are accomplished by introducing basic (positively charged) amino acids into the protein, while decreases in pi are accomplished by introducing acidic (negatively charged) amino acids. These charged amino acids are introduced at positions which do not disturb the structure or function of the protein. Oxygen equilibrium curves (OECs) of human hemoglobin purified from the transgenic mice are determined as described by Ryan et al. (Science 247:566-568, 1990).
  • the anti-sickling properties of the AS hemoglobins can be quantitated by in vitro solubility assays as described, e.g., by Benesch et al. (J. Biol. Chem. 254:8169, 1979). Briefly, the anti- sickling hemoglobin is mixed with Hb S. The solution is cooled to 0°C, deoxygenated, and then incubated at 30°C for 2 to 3 hours. Insoluble polymers are pelleted by ultracentrifugation, and the concentration of hemoglobin in the supernatant is determined spectrophotometrically. The solubility of mutant hemoglobin/Hb S mixtures is compared with Hb A/Hb S and Hb F/Hb S solutions.
  • Transgenic lines expressing ASl or AS2 were established, and hemolysates obtained from several animals were analyzed by anion exchange high performance liquid chromatography (HPLC) to quantitate the amounts of human, mouse, and hybrid hemoglobins (Ip et al.. Anal. Biochem. 156:348, 1986; Hemoglobin tetramers were separated by anion exchange HPLC utilizing a Synchropak AN 300 (4.6 mm x 25 mm) column (SynChrom, Lafayette, IN)).
  • Figs. 5A and 5C show that 28% of total hemoglobin was Hb ASl in one ⁇ 0 AS1 transgenic line, and 18% of total hemoglobin was Hb AS2 in one ⁇ 2 transgenic line.
  • Hemoglobins ASl and AS2 were isolated by preparative IEF (Behringer et al.. Science 245:971, 1989) and the purity of the human hemoglobins was assessed by denaturing reverse phase (HPLC) which separates the ⁇ - and 0-globin subunits (Adachi et al. , J. Chromat. 419:303, 1987. Mouse and human globins were separated by RP-HPLC using a Dionex Series 4500i HPLC system (Sunnyvale, CA) .
  • Figs. 5B and 5D show that Hb ASl was approximately 90% pure, while Hb AS2 was purified to homogeneity.
  • Oxygen equilibrium curves (OEC) for purified Hb ASl and Hb AS2 are illustrated in Figs. 6A and 6C (Asakura et al. in Oxygen Transport in Red Blood Cells f C. Nicolau Ed. (Pergamin, New York, 1986) .
  • Oxygen equilibrium curves were measured with a Hemox Analyzer (TCS, Victoria, PA). The OEC were determined in 0.1 M potassium phosphate buffer, pH 7.0 at 20°C) .
  • the sigmoidally shaped curves demonstrate the normal cooperativity of oxygen binding (Figs. 6A and 6C) .
  • the P 50 value which measures the partial pressure of oxygen at which hemoglobin is half-saturated, was determined for Hb ASl and Hb AS2 and compared with Hb A and Hb F (Table 1) .
  • the P 50 for Hb ASl is slightly elevated, but within the normal range, and this hemoglobin responds normally to the allosteric effector 2,3-diphosphoglycerate (2,3- DPG) ; that is, oxygen affinity is decreased in the presence of 2 mM 2,3-DPG (Fig. 6B) .
  • the P 50 for Hb AS2 is slightly lower than normal (6.7 mm Hg) but 2,3-DPG raises this value to 8.4 mm Hg.
  • the oxygen affinity of Hb AS2 is functionally equivalent to Hb F in the presence of 2 mM 2,3-DPG (Fig. 6D) and, therefore, Hb AS2 should adequately bind and deliver oxygen in vivo.
  • Fig. 7A shows that Hb S polymerizes relatively rapidly and that Hb A, ASl, AS2, and F delay Hb S polymerization to different extents.
  • Hb ASl inhibits Hb A polymerization more efficiently than Hb A; however, Hb ASl inhibits much less effectively than Hb F which is known to inhibit sickling in vivo at a 3:1 ratio (Noguchi et al., New Eng. J. Med. 318:96, 1988).
  • Hb AS2 inhibits Hb S polymerization at approximately the same level as Hb F. This result strongly suggests that Hb AS2 will inhibit Hb S polymerization in vivo if expression of AS2 at a level of 25% of total hemoglobin can be achieved.
  • Fig. 7A The delay times determined in Fig. 7A were all measured at a concentration of 60 mg/dl.
  • Fig. 7B shows the results of similar experiments performed at variable concentrations of total hemoglobin. The ratio of Hb S to Hb A, ASl, AS2 or F in all of these experiments was 3:1. In this figure the log of the reciprocal of the delay time and the log of hemoglobin concentration are plotted. As reported previously (Hofrichter et al., Proc. Natl. Acad. Sci. USA 71:4864, 1974; Wishner et al., J. Mol. Biol. 98:179, 1975; Crepeau et al., Nature 274:616, 1978; Dykes et al., J. Mol. Biol.
  • Hb AS2 human hemoglobin
  • GENERAL INFORMATION (i) APPLICANT: Townes, Tim M. Prchal, Josef T. Luhovy, Marian McCune, Steven L. Prchal, Jaraslov F.

Abstract

The invention features a method of treating a disease of hematopoietic cells in a mammal involving introducing into the mammal hematopoietic stem cells containing an adeno-associated viral vector containing a nucleic acid encoding a gene product capable of alleviating symptoms of the disease.

Description

TRANSDUCTION OF GENES INTO HUMAN HEMATOPOIETIC STEM CELLS USING RECOMBINANT ADENO-ASSOCIATED VIRAL VECTORS
BagKqrQvmd. of the invention This invention relates to gene therapy of diseases of hematopoietic cells.
Hematopoietic stem cells have two unique characteristics. First, they are pluripotent; that is, they are capable of differentiating into all mature blood cell types. Second, they are self-renewing; that is, they are capable of dividing and maintaining their pluripotentiality. Hematopoietic stem cells were first characterized by Dexter and his group (Dexter and Spencer, Ann. Rev. Cell Biol. 3:423-441, 1987). Subsequently, many other investigators have contributed to the understanding of their developmental potential, functional characteristics, and requirements for maintenance in culture (see, e.g., Dexter and Spencer, Ann. Rev. Cell Biol. 3:423-441, 1987; Lemisch a et al., Cell 45:917-927, 1986). Fig. 1 illustrates the pluripotent, hematopoietic stem cell and various myeloid and lymphoid lineages that are derived from this cell (Stamatoyannopoulos et al., The Molecular Basis of Blood Diseases. (Philadelphia; .B. Saunders Company) 88:108- 109, 1994).
Summary of the Invention We have shown that adeno-associated viral (AAV) vectors are effective at transducing genes into pluripotent hematopoietic stem cells. Accordingly, in a first aspect, the invention features a method of treating a disease of hematopoietic cells in a mammal involving introducing into the mammal hematopoietic cells, e.g., hematopoietic stem cells, containing an AAV vector containing a nucleic acid encoding a gene product capable of alleviating symptoms of the disease.
By "hematopoietic cells" is meant blood cells, including hematopoietic stem cells, and cells derived therefrom, including, without limitation, common lymphoid progenitor cells, T cells (e.g., helper, cytotoxic, and suppressor cells) , B cells, plasma cells, natural killer cells, common myeloid progenitor cells, monocytes, macrophages, mast cells, leukocytes, basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes.
By "disease of a hematopoietic cell" is meant any condition characterized by impairment of any normal function of a hematopoietic cell. The diseases of hematopoietic cells that can be treated according to the method of the invention include genetic diseases (e.g., Adenosine Deaminase Deficiency, Fanconis' Anemia, and hemoglobinopathies, such as Sickle Cell Anemia, Thalassemias, and Hemoglobin C Disease) , as well as diseases acquired by infectious or non-infectious means (e.g., Acquired Immune Deficiency Syndrome and leukemias) .
By "vector" is meant a replicable nucleic acid construct. An "adeno-associated viral vector" is a vector containing AAV inverted terminal repeats (iTRs) , and any modified versions thereof. AAV vectors are described in general by Kotin et al. (Kotin et al., Proc. Natl. Acad. Sci. USA 87:2211-2215, 1990). Specific examples of AAV vectors are given below. Appropriate regulatory sequences, such as enhancers and promoters, are inserted into the vectors of the invention using standard methods known to those skilled in the art, for example, by homologous recombination (Graham et al., J. Gen. Virol. 36:59-72, 1977) or other appropriate methods (Molecular Cloning: A Laboratory Manual, Sambrook et al. , eds. Cold Spring Harbor Laboratory, 2nd Edition, Cold Spring Harbor, New York, 1989) . Promoters are inserted into the vectors so that they are operably linked 5' to the nucleic acid sequence encoding the gene product. By "operably linked" is meant that a gene and a regulatory sequence, such as a promoter and/or enhancer, are connected in such a way as to permit gene expression when the appropriate molecules (e.g., transcriptional activator proteins) are bound to the regulatory sequence(s). By "promoter" is meant a minimal sequence sufficient to direct transcription. Any promoter that is capable of directing initiation of transcription in a eukaryotic hematopoietic cell may be used in the invention. For example, general promoters, such as the cytomegalovirus promoter may be used. Alternatively, hematopoietic cell type-specific promoters, e.g., globin promoters, may be used.
By "gene product" is meant a molecule that is produced as a result of transcription of a gene. Gene products include RNA molecules transcribed from a gene, as well as proteins encoded by RNA transcribed from a gene. Protein gene products that are included in the invention include, but are not limited to, anti-sickling hemoglobins, >9-globin, fetal γ-globin, Fanconis' Anemia complementation gene products (e.g., the Fanconis' Anemia C gene), and adenosine deaminase. RNA gene products included in the invention include RNAs that are antisense to target RNAs. The term "antisense", as used herein, describes the interaction of an RNA gene product with a nucleic acid target in a cell in a sequence-specific manner, more particularly, the interaction of the RNA gene product with complementary target RNA sequences, resulting in inhibition of transcription or translation of the target RNA. The nucleic acid target may be a cellular nucleic acid or a nucleic acid derived from a pathogen (e.g., a virus, such as HIV) that has infected the cell. In a preferred embodiment, the antisense RNA is antisense to HIV RNA. For a general review of the therapeutic applications of antisense nucleic acids, see, e.g., Le Doan et al., Bull. Cancer 76:849, 1989; Donick, Biochem. Pharmacol. 40:671, 1990; Crooke, Annu. Rev. Pharmacol. Toxicol. 32:329, 1992. The RNA gene product may also be a ribozyme that cleaves a target RNA which, as described above, may be a cellular nucleic acid or a nucleic acid derived from a pathogen (e.g., HIV) that has infected the cell. In a preferred embodiment, the gene product is a ribozyme that cleaves HIV RNA.
In a second aspect, the invention features a hematopoietic stem cell containing an AAV vector containing a nucleic acid encoding a gene product capable of alleviating symptoms of a disease of hematopoietic cells. The gene products contained in the hematopoietic stem cells of the invention include, but are not limited to, an anti-sickling hemoglobin, /9-globin, fetal γ- globin, adenosine deaminase, the Fanconis' Anemia C gene product, RNA that is antisense to HIV RNA, or a ribozyme that cleaves HIV RNA. Mammals that can be treated using the methods of the invention include, but are not limited to, humans, cows, dogs, cats, sheep, goats, rabbits, rats, guinea pigs, hamsters, and mice.
In a third aspect, the invention features an adeno-associated viral vector made in a semi-packaging cell line, and containing a nucleic acid encoding a therapeutic gene product, for use in therapy. In a fourth aspect, the invention features a hematopoietic cell (e.g., a hematopoietic stem cell) containing an adeno-associated viral vector made in a semi-packaging cell line, and containing a nucleic acid encoding a therapeutic gene product, for use in therapy. In a fifth aspect, the invention features the use of an adeno-associated viral vector for the preparation of a medicament for use in therapy for a disease of hematopoietic cells in a mammal. The viral vector is made in a semi-packaging cell line and contains a nucleic acid encoding a gene product capable of alleviating a symptom of the disease.
In a sixth aspect, the invention features a hematopoietic cell containing an adeno-associated viral vector for use in therapy for a disease of hematopoietic cells in a mammal. The adeno-associated viral vector is made in a semi-packaging cell line and contains a nucleic acid encoding a gene product capable of alleviating a symptom of the disease. The adeno-associated viral vectors used in the invention may be produced from the semi-packaging cell line at a titer of at least 107 or 108 plaque-forming units/milliliter. The semi-packaging cell line may contain the rep or cap genes of adeno-associated virus on an episomal vector.
The advantages of using AAV vectors in gene therapy methods include (1) AAV are completely non- pathogenic, (2) AAV have a broad host range, (3) AAV particles can be concentrated to titers of 109, (4) AAV inverted terminal repeats (ITRs) do not contain enhancers that can activate host genes (e.g., oncogenes) upon viral insertion, and (5) AAV are capable of infecting quiescent cells.
Other features and advantages of the invention will become apparent from the following detailed description, the drawings, and the claims.
Detailed Description The drawings are first described. Drawings Fig. 1 is an illustration of the pathways of differentiation of hematopoietic stem cells.
Figs. 2A and 2B are schematic representations of pEBAVrc and pEBAVcmv/lac vectors, respectively. Fig. 3 is agarose gel analysis of PCR reactions containing DNA extracted from twenty two separate BFU-E (burst-forming units-erythroid) which differentiated from hematopoietic stem cells transfected with pEBAVcmv/lac that were taken from a homozygous sickle cell patient . Fig. 4 is an illustration of 5' HS 1-5 αl and HS 1-5 >9AS constructs. One hundred kilobases of the human β- globin locus and 35 kilobases of the human α-globin locus are illustrated. Cos ids containing HS 1-5 αl and HS 1-5 3AS were constructed by fusing either the αl gene or a recombinant anti-sickling /3-globin gene downstream of the β-globin locus control region (LCR) . The 26 kb inserts were purified from vector sequences, mixed at a 1:1 molar ratio (final DNA concentration was 2 ng/μl) , and co- injected into fertilized mouse eggs. Transgenic lines displaying high-level, balanced expression of the transgenes were established.
Figs. 5A-5D are graphs of chromatographs of hemolysates and HPLC-purified anti-sickling hemoglobins. Fig. 5A is a graph of a chromatograph of hemolysate obtained from transgenic mice expressing Hb AS1. Hemoglobins were separated by non-denaturing HPLC. Twenty eight percent of the hemoglobin in erythrocytes of these animals is recombinant human α/3AS1. Fig. 5B is a graph of denaturing HPLC analysis of αj8AS1 purified from the hemolysate shown in Fig. 5A. Purification was performed by preparative isoelectric focusing (IEF) . Approximately 10% of the /9-globin chains were of urine origin. Fig. 5C is a graph of a chromatograph of hemolysate obtained from transgenic mice expressing Hb AS2. Hemoglobins were separated by non-denaturing HPLC. O 96/08560 PC17US95/11858
- 7 -
Eighteen percent of the hemoglobin in the erythrocytes of these animals is recombinant human aβ1^2. Fig. 5D is a graph of denaturing HPLC analysis of aβ9^2 purified from the hemolysate shown in Fig. 5C. Purification was performed by preparative IEF. This hemoglobin lacks any contaminating urine globins. Hemoglobins purified by preparative IEF were used in all subsequent experiments.
Figs. 6A-6D are oxygen equilibrium curves (OECs) for purified human anti-sickling hemoglobins. Fig. 6A is an OEC curve for Hb AS1 at pH 7.0 in 0.1 M potassium phosphate (KP04) buffer at 20βC. Fig. 6B is an OEC curve for Hb AS1 under the same conditions as those described in Fig. 6A, with the addition of 2 mM 2,3- diphosphoglycerate (DPG) . Fig. 6C is an OEC curve for Hb AS2 at pH 7.0 in 0.1 M KP04 buffer at 20°C. Fig. 6D is an OEC curve for Hb AS2 under the same conditions as those described in Fig. 6C with the addition of 2 mM 2,3- DPG.
Figs. 7A-7B are graphs showing polymerization delay times for deoxygenated mixtures of human hemoglobins. Fig. 7A shows delay times for hemoglobin mixtures containing 100% Hb S or 75% Hb S, together with 25% Hb A, Hb AS1, Hb AS2, or Hb F. Curves were determined at a hemoglobin concentration of 60 mg/dl using the temperature jump method (Adachi et al., J. Biol. Chem. 254:7765, 1979). The delay time is an indication of the ability of a hemoglobin to disrupt the polymerization of Hb S. The delay time of Hb AS1 is between that of Hb A and Hb F, while the delay time of Hb AS2 is similar to that of Hb F at this hemoglobin concentration. Fig. 7B shows delay time vs. hemoglobin concentration. The progression of the plots from left to right demonstrates the increased Hb concentrations which are required for polymerization to occur in the presence of the various non-S hemoglobins. The delay time plots for Hb AS2 and Hb F overlap, indicating that the anti- polymerization activities of Hb AS2 and Hb F are virtually identical. Fig. 8 is an illustration of a retroviral vector useful for the production of anti-sickling hemoglobin.
Gene Transfer into Hematopoietic Stem Cells
We have shown that AAV vectors are capable of transducing genes into hematopoietic stem cells. Hematopoietic stem cells differentiate into a large number of different cells (Fig. 1) , including common lymphoid progenitor cells, T cells (e.g., T-helper cells, cytotoxic T cells, and suppressor T cells) , B cells, plasma cells, natural killer cells, common myeloid progenitor cells, monocytes, macrophages, mast cells, leukocytes, basophils, neutrophils, eosinophils, megakaryocytes, platelets, and erythrocytes. Gene transfer into hematopoietic stem cells, therefore, potentially results in gene transfer into all of these cells. Thus, any disease that can be treated by the expression of a transgene in any of these cells can be treated using the methods of the present invention. For example, hemoglobinopathies, such as /3-thalassemia and sickle cell anemia, can be treated by using, e.g, the β- globin gene (Karlsson et al., Ann. Rev. Biochem. 54:1071- 1108, 1985, and references therein), while α-thalassemia can be treated by using the α-globin gene. Sickle cell anemia can also be treated by using an anti-sickling hemoglobin gene (see below) or a γ-globin gene. Fanconis' anemia can be treated using the Fanconis' C gene, or genes from other Fanconis complementation groups (dos Santos et al., Stem Cells 12:142-153, 1994). Further, adenosine deaminase deficiency (ADA) can be treated by using the adenosine deaminase gene (Blaese et al., Hum. Gene Ther. 4:521-7, 1993); and acquired immune deficiency syndrome (AIDS) can be treated by using anti¬ sense or ribozyme sequences designed to inhibit HIV replication (Tsuchuhashi et al.. Science 262:99-102, 1993; Lisziewicz et al., Proc. Natl. Acad. Sci. USA 90:8000-4, 1993) in the methods of the invention.
AAV vectors are vectors that contain AAV inverted terminal repeats (ITRs) . AAV belongs to the genus Dependovirus (family parvoviridae) , and is also known as adenosatellite and dependovirus. These viruses are antigenically unrelated to adenovirus, but require the presence of adenovirus in order to replicate. There are at least four serotypes, all sharing common antigens. Dependoviruses are characterized in that they (1) are small and containing single-stranded DNA, (2) have virions of 18 to 26 nm in diameter, (3) are not enveloped, (4) are ether-resistant, (5) have capsids with cubic symmetry (with 32 capsomeres) , and (6) their replication and assembly occur in the nucleus of infected cells.
Appropriate promoters and genes are introduced into the vectors of the present invention using standard methods in the art (see, e.g., Molecular Cloning: A Laboratory Manual, Sambrook et al., eds. Cold Spring Harbor Laboratory, 2nd Edition, Cold Spring Harbor, New York, 1989) . Any promoter that is sufficient to direct the initiation of transcription in a hematopoietic cell may be used in the invention. For example, a preferred non-tissue specific promoter is the cytomegalovirus (CMV) promoter (DeBernardi et al., Proc. Natl. Acad. Sci. USA 88:9257-9261, 1991, and references therein). Any hematopoietic cell-type specific promoter may also be used in the invention. For example, globin promoters, such as the 0-globin promoter (Karlsson et al., Ann. Rev. Biochem. 54:1071-1108, 1985, and references therein) may be used.
Any appropriate source may be used to obtain the hematopoietic stem cells used in the invention. Preferably, the hematopoietic stem cells are obtained from the patient into which the stem cells are to be transplanted after AAV-infection. Hematopoietic stem cells are obtained from patients and, after infection by AAV vectors, are introduced into patients using standard methods in the art (see, e.g., United States Patent
5,061,620; Rubenstein et al., (eds.) Scientific American Medicine, Scientific American, Inc. (New York, 1978) , and references therein) .
The most stringent experimental criterion for hematopoietic stem cells is the ability of these cells to reconstitute the entire blood system of a lethally irradiated animal. This experiment obviously cannot be carried out in humans and therefore other assays have been developed to demonstrate the pluripotentiality and self-renewing characteristics of human hematopoietic stem cells. The most widely accepted assay for human hematopoietic stem cells is the Long Term Culture- Initiating Cell (LTC-IC) assay, which involves culturing bone marrow cells for 5 weeks and then analyzing the developmental potential of surviving cells by plating these cells in semi-solid medium (Eaves et al., J. Tiss. Cult. Meth. 13:55-62, 1991). After 14 days in semi-solid medium, colonies of all cell lineages are detectable if pluripotent, self-renewing cells were present when the long term culture was initiated.
The LTC-IC assay has been used to demonstrate that retroviral vectors are capable of transducing genes into human hematopoietic stem cells (Hughes et al., J. Clin. Invest. 89:1817-1824, 1992). AAV vectors, which, as described above, have several advantages for use in gene therapy, have not been previously tested in this system. The receptor for AAV is not known; therefore, it was impossible to predict whether the virus would infect hematopoietic stem cells. We purified human hematopoietic stem cells by the procedures described below and infected these cells with recombinant AAV. Production of high titer, recombinant AAV
We developed a packaging line that is capable of producing a high titer (107 pfu/ml) stock of AAV-derived vector containing a CMV/lacZ reporter gene. The "semi- packaging" cell line was established with a silent episomal vector (pEBAVrc; Fig. 2A) . This vector contains an EBV replication origin and an EBNA1 gene. This arrangement enables the vector to be established as an episome and replicate to high copy numbers. The rep-cap genes of AAV are inserted into the vector with their natural control elements; therefore, these genes are activated only in the presence of adenovirus early gene products. This arrangement provides a switch-system to regulate the expression of the rep gene, which has been found to have a cytostatic effect. The vector also contains a hygromycin resistance gene to provide selection for cells that contain the vector. The plasmid sequences of the vector contain an ampicillin resistance gene and a bacterial replication origin for replicating the DNA in bacteria.
The AAV vector containing the lacZ gene was inserted into a similar vector, pEBAVcmv/lac (Fig. 2B) . This vector contains a CMV immediate-early transcriptional cassette containing the lacZ gene which is flanked by the two ITR sequences of AAV.
To establish the semi-packaging cell line, HeLa cells in 100 mm culture dishes were transfected with pEBAVrc. HeLa cells were seeded 24 hours prior to transfection, and allowed to reach 50-70% confluence at the time of transfection. Cells were washed once with serum-free DMEM (Gibco) . After removal of the medium, 8 ml of DMEM containing 10% fetal calf serum was added to the culture on the next day. At 12 hours after this medium change, cells were trypsinized and passed to three 100 mm dishes in DMEM containing 10% fetal calf serum and 270 u/ml of Hygromcyin (Sigma) . Special care should be taken to allow cells to settle at the bottom of the plate individually. Cells were selected with hygromycin for 10 to 15 days when individual colonies began to grow.
Colonies from 3 to 4 dishes were trypsinized and pooled into one 100 mm dish. Cells were kept at 60-70% confluence in medium containing 200 u/ml of hygromycin. When 90% confluence was reached cells were transferred into four 100 mm dishes in DMEM containing 10% DMEM without hygromycin. At 24 hours post-seeding, each 100 mm dish of cells was transfected with 5 μg each of pEBAVrc and pEBAVcmv/lac. At 3 hours after the addition of the transfection medium, wild-type adenovirus (HuAd5) was added to the cells at an MOI of 10, without removal of the transfection medium. At 12 hours after the transfection, the medium was changed to DMEM containing 5% fetal calf serum and incubated for three days or until most of the cells showed cytopathic effects. All of the media except 1 ml was removed from each 100 mm dish. Cells were scraped off the plate and transferred into a 10 ml screw-cap tube. This viral lysate was stored at - 100°C until further treatment.
The viral lysate was thawed on ice, and sonicated for 10-15 minutes with pulse ultrasound. The tube was put back on ice periodically to prevent the sample from heating up. The viral lysate was then spun at 15,000 rp for 10 minutes in a JL-20 centrifuge (Beckman) . The supernatant was removed and aliquoted into freezing wells of 10 ml each and stored at -100°C. For infecting of hematopoietic stem cells, it was not necessary to remove or inactivate the adenovirus since stem cells lack receptor for adenovirus. For infection of cells that are susceptible to adenovirus infection, adenovirus should be removed by chromatography, of CsCl gradient centrifugation.
The titer of the virus was determined by the rate of transduction of HeLa cells with the lacZ gene. One, two, and three ml of the viral stock were used to infect HeLa cells in 24-well plates. At 24 hours post infection, the cells were fixed with 0.1% glucoraldehyde at 4°C for 2 min, and washed thoroughly with DMEM. Cells were then stained with 0.3% X-gal with standard procedures. Percentages of the cells that stained blue were determined by light microscopy. There were 2 x 105 HeLa cells in each well and one half of the cells (1 x 105) stained blue. Therefore, the viral titer was at least 108/ml.
The transfection procedure was as follows. For each 100 mm dish, 8-10 μg DNA was dissolved in 2 ml of DMEM or transfection medium from BRL. 90-100 μl of lipofectamine (BRL) was suspended in 2 ml of DMEM. The lipid containing medium was mixed with the DNA containing medium slowly and dropwise, while the tube was gently rotated. After mixing well by gently rotating the tube, the transfection mixture was incubated for 30 minutes at room temperature. The mixture was then diluted with DMEM to a total volume of 8 ml. The mixture was then added to the cells, which had been washed once or twice with DMEM without serum. Care should be taken to not allow the cells to dry between each wash. Purification of human hematopoietic stem cells
Bone marrow was obtained from individuals following the IRB approved protocol. Mononuclear cells were purified using density gradient centrifugation using standard procedures. The mononuclear bone marrow cells were isolated by Ficoll/Hypaque density gradient centrifugation (average yield 1-2 x 108 cells) . The recent development of magnetic activated cell sorting (MACS) allowed for rapid enrichment of CD34+ cells (Kato and Radbruch, Cytometry 14:384-392, 1993). The cells were labeled with anti-CD34+ antibodies that were conjugated with magnetic particles and run through the magnetic separation column from Miltenyi Biotec (Sunnyvale, CA) . A single passage of mononuclear human bone marrow cells through the magnetic column yielded CD34+ cells that were greater than 90% pure. Hematopoietic stem cells were further enriched by selecting for and against various surface molecules according to principles outlined by Baum et al. (Proc. Natl. Acad. Sci. USA 89:2804-2808, 1992). The progenitors were labeled with FITC conjugated antibody that recognizes a different CD34+ epitope than the magnetic bead conjugated anti-CD34 antibody. Lin- cells are isolated by a negative selection using a cocktail of PE labeled antibodies that recognize myeloid, B cells, T cells, and NK cell markers (CD 2, CD 14, CD 19, CD 56). Thy+ cells were isolated by positive selection with biotinylated, anti-human Thy mouse monoclonal antibody that was labeled with steptavidin-conjugated, Texas red dye. Infection of hematopoietic stem cells
Ten thousand CD34+, Lin-, Thy+ cells were suspended in 200 μl of DMEM without serum and dispensed into a single well of a 96 well plate. Ten microliters of the recombinant virus (AAV cmv/lacZ; 108 u/ml) were added to the cells and incubated at 37°C for 16 hours. The cells were then washed 3 times with DMEM without serum and plated into long term culture as described by Eaves et al. (J. Tiss. Cult. Meth. 13:55-62, 1991). Analysis of cells
After 6 weeks in long term culture, cells were removed and plated in methylcellulose for clonogenic progenitor assays (Eaves and Eaves, Blood 52:1196-1210, 1978) . BFU-E were picked after 14 days, DNA was extracted and PCR was performed with primers specific for lacZ. PCR products were run on agarose gels, blotted to nitrocellulose and hybridized with radiolabeled, lacZ sequences. Fig. 3 demonstrates that at least 5 of 22 (22%) BFU-E contained the transduced lacZ gene.
Anti-sickling ,9-globin βenes Designed to Inhibit Hb 8 Polymerization
The molecular basis for sickle cell disease is an A to T transversion in the 6th codon of the human ,9-globin gene. This simple transversion changes a polar glutamic acid residue to a non-polar valine (Ingram et al.. Nature 178:792, 1956; Ingram et al.. Nature 180:326, 1957) in the /9-globin polypeptide and, thus, drastically decreases the solubility of this hemoglobin (termed Hb S) . When the intracellular concentration of Hb S is high and the partial pressure of oxygen in the capillary beds is low, the non-polar valine, which is on the surface of the hemoglobin molecule, interacts with two other non-polar residues on the surface of a second hemoglobin molecule, and initiates aggregation (Padlan et al., J. Biol. Chem. 260:8280-8291, 1985; Wishner et al., J. Mol. Biol. 98:179-194, 1975). Once approximately 10 hemoglobin monomers interact, long polymers rapidly accumulate, and complex 14-stranded fibers are formed (Crepeau et al., Nature 274:616-617, 1978; Dykes et al., J. Mol. Biol. 130:451-472, 1979; Eaton et al., Blood 70:1245-1266, 1987; Hofrichter et al., Proc. Natl. Acad. Sci. USA 71:4864-4868, 1974). The formation of these fibers reduces the flexibility of red blood cells, leading to the occlusion of small capillaries. Intracellular fiber formation also results in erythrocyte membrane damage and increased red cell lysis (Noguchi et al., Blood 58:1057, 1981; Brittenham et al., Blood 65:183, 1985). The ensuing disease is characterized by a chronic hemolytic anemia, episodes of severe pain, and tissue damage that can result in stroke, kidney failure, heart disease, infection, and other complications (Bunn et al., Hemoglobin: Molecular. Genetic, and Clinical Aspects. (W. B. Saunders, Philadelphia, 1986)). Recombinant hemoglobins which contain anti- sickling mutations can be used to inhibit Hb S polymerization, and thus facilitate gene therapy of sickle cell anemia. The glutamic acid to valine change at the 6th position of the βB polypeptide creates a non- polar surface that readily interacts with a natural hydrophobic pocket in the β chain of a second tetramer. This natural pocket is formed primarily by phenylalanine (phe) at position 85 and leucine (leu) at position 88. This interaction leads to the formation of the complex 14-stranded fibers described above (Bunn et al.,
Hemoglobin: Molecular. Genetic, and Clinical Aspects. 1986, W.B. Saunders, Philadelphia) . The structure of the fiber that forms in sickle erythrocytes was derived from X-ray diffraction studies of Hb S crystals (Edelstein, J. Mol. Biol. 150:557, 1981). Hb S tetramers are composed of two α-globin subunits (α2) and two >9s-globin subunits (βa 2) i and form the characteristic double-stranded fibers. Interactions along the long axis of the fiber are termed axial contacts, while interactions along the sides of tetramers are lateral contacts (Bunn et al., Hemoglobin: Molecular. Genetic, and Clinical Aspects. (W.B. Saunders, Philadelphia, 1986)). The 06 valine plays a critical role in the lateral contact by interacting with the hydrophobic residues /385 phenylalanine and ,988 leucine. Accordingly, to interfere with detrimental Hb S polymerization, this interaction and, thus, hydrophobic pocket formation should be disrupted. Because Hb A (α2ι92) has these same hydrophobic residues and is readily incorporated into sickle fibers, it cannot be used for this purpose. Moreover, although disruption of this pocket represents the best approach for inhibiting Hb S polymerization, certain strategies have detrimental side effects. For example, although amino acid substitutions at ,985 phe and ,988 leu would interfere with pocket formation, these amino acids are also important for correct positioning of the heme moiety, and cannot be mutated without severely altering oxygen affinity (Dickerson et al., Hemoglobin: Structure. Function. Evolution, and Pathology. (Benjamin/Cummings, Menlo Park, CA, 1983)).
A better approach for inhibiting Hb S polymerization involves making a ,987 threonine (thr) to glutamine (gin) substitution that disrupts the hydrophobic pocket, without inhibiting ,9-globin function (Perutz et al.. Nature 219:902-909, 1968). The long side chain of glutamine prevents the ,96 Val from interacting with the hydrophobic pocket. Human γ- and ό"-globin polypeptides both have such a glutamine at position 87, and both Hb F (α2γ ) and Hb A2 (α2«S2) have potent anti- sickling activity (Nagel et al., Proc. Natl. Acad. Sci., USA 76(2) :670-672, 1979). Another naturally occurring human hemoglobin, designated Hb D Ibadan, also has anti- sickling activity (Watson-Williams et al.. Nature 205:1273, 1965). This hemoglobin has a lysine at position 87 and its long side chain also projects across the hydrophobic pocket and inhibits interactions with the ,96 Val.
Preferably, to produce a recombinant anti-sickling hemoglobins, the mutations described above (which interfere with a major lateral contact) are combined with a second mutation which interferes with an axial contact. The side chains of the amino acids lysine-17 (lys) , asparagine-19 (asn) , and glutamic acid-22 (glu) , project to form a surface which stabilizes the axial contact with another sickle hemoglobin tetramer (Dickerson et al.. Hemoglobin: Structure. Function. Evolution, and Pathology. (Benjamin/Cummings, Menlo Park, CA, 1983)). Although mutations at residues 17 or 19 are detrimental, amino acid 22 can be mutated from glutamic acid to alanine (ala) without an alteration in hemoglobin function (Bowman et al.. Biochemical and Biophysical Research Communications 26(4) :466-470, 1967; Bunn et al.. Hemoglobin: Molecular. Genetic, and Clinical Aspects. (W.B. Saunders, Philadelphia, 1986)). The negative charge of the glutamic acid side chain at this position plays a key role in stabilizing the axial contact because it interacts with the positively charged imidazole group of a histidine at position 20 in the α chain of the neighboring tetramer. The shorter nonpolar alanine side chain fails to stabilize this interaction, thus disrupting the axial contacts between sickle hemoglobin tetramers. Hb AS2 contains a glutamine at position 87 together with an alanine at position 22. Hb AS1 has the same 022 alanine and asparagine at 080 is replaced by lysine. This 080 lysine significantly inhibits sickling when present as a single site mutation in Hb A (Nagel et al.. Nature 283:832, 1980). The following 27-mer oligos were used for mutagenesis at the indicated amino acids in 0-glθbin: 022, GTGAACGTGGATGCCGTTGGTGGTGAG (SEQ ID NO: 1); 080, GCTCACCTGGACAAGCTCAAGGGCACC (SEQ ID NO: 2); 087, GGCACCrTTTGCCCAGCTGAGTGAGCTG (SEQ ID NO: 3).
Another anti-sickling mutation in the human 0- globin gene useful in the invention is the Hb G Szuhu mutation, a 080 asn to lys mutation which has significant anti-sickling activity (Nagel et al., Proc. Natl. Acad. Sci. USA 76(2) :670-672, 1979), but which does not impair hemoglobin function (Kaufman et al., Human Heredity 25:60-68, 1975). This mutation is preferably combined with the 022 glu to ala mutation described above. Alternatively, an α-globin mutation may be utilized to inhibit Hb S polymerization. One example of such an α-globin mutation is provided by the hemoglobin designated Hb Montgomery (Brimhall et al., Biochim. Biophys. Acta. 379(1) :28-32, 1975), which contains an α48 leucine to arginine mutation. The 54 year old patient from which this mutation was isolated was homozygous for 0s, but had no history of painful sickle cell crises, jaundice, leg ulcers, or stroke, and was only mildly anemic (Prchal et al., Am. J. Med. 86(2) :232-236, 1989). Anti-sickling hemoglobin AS3 combines the mutations at 022 and 087, which are present in anti- sickling hemoglobin AS2, with an additional mutation which lowers the oxygen affinity of the recombinant hemoglobin. The goal is to produce an anti-sickling hemoglobin which delivers oxygen to tissues prior to sickle hemoglobin (Hb S) . We have termed this concept "preferential deoxygenation." If the anti-sickling hemoglobin delivers oxygen preferentially, Hb S will remain oxygenated and, therefore, will not polymerize. The mutation which was selected to lower the oxygen affinity of the anti-sickling hemoglobin is a change from asparagine to lysine at position 108 of the -globin chain. This is the mutation which is present in the naturally-occurring Hb Presbyterian (Moo-Penn et al. , FEBS Letters 92:53-56, 1978). Hb AS3 has the following three mutations: (1) 022 glutamic acid to alanine, (2) 087 threonine to glutamine, and (3) 0108 asparagine to lysine.
Two additional anti-sickling hemoglobins, AS4 and AS5, have been made which combine the mutations present in Hb AS2 at 022 and 087, with additional mutations which cause the 0-globin subunit to become more negatively charged. In red blood cells, surface charge is a key determinant of the ability of α-globin and 0-globin monomers to associate with each other to form dimers (Bunn, Blood 69:1-6, 1987). The alpha subunit is somewhat positively-charged, while the beta subunit is somewhat negatively-charged. By increasing the negative charge on the 0-globin subunit, it is possible to increase its affinity for the α-globin subunit.
Introduction of an additional negative charge in the anti-sickling hemoglobin will provide 0AS polypeptides with a competitive advantage for interacting with α- globin polypeptides. Consequently, α20AS 2 tetramers will form more efficiently than α 0s 2 tetramers.
Anti-sickling hemoglobins Hbs AS4 and AS5 combine the mutations present in AS2 with a mutation which increases the negative charge on the 0-globin subunit. One mutation which increases the negative charge on the 0-globin subunit, but which does not affect the normal functioning of the hemoglobin molecule, is a change from lysine to glutamic acid at position 95. This mutation occurs naturally and is known as Hb N-Baltimore. The resulting change in charge is -2, since a positively- charged lysine is replaced by a negatively-charged glutamic acid. This change in charge also allows Hb AS4 and Hb S to be distinguished by isoelectric focusing. Hb AS4 has the following three mutations: (1) 022 glutamic acid to alanine, (2) 087 threonine to glutamine, and (3) 095 lysine to glutamic acid.
An additional mutation which occurs naturally and which is known to increase the ability of the 0-globin subunit to compete for the α-globin subunit is known as Hb J-Baltimore. This mutation consists of a change from glycine to aspartic acid at position 16 of the 0-globin subunit. While this mutation adds only one additional negative charge to the 0-globin chain (compared to the two negative charges added by the N-Baltimore mutation described above) , the location of the negative charge is significant. In fact, Hb J-Baltimore competes even more effectively than Hb N-Baltimore for the α-globin subunit. Hb AS5 has the following three mutations: (1) 016 glycine to aspartic acid, (2) 022 glutamic acid to alanine, and (3) 087 threonine to glutamine. The invention includes the use of anti-sickling hemoglobins that contain any combinations of the individual mutations described above. For example, the 0108, 095, and 016 mutations may occur either alone, in combination with the 022 mutation, or in combination with the 022 mutation and either the 080 or either of the above-described 087 mutations. Mutagenesis of Human α- and 0-globin Genes
Mutations may be introduced into the normal human α- and 0-globin genes by site-directed mutagenesis. For example, a 3.8 kb Bglll-EcoRI fragment containing the human α-globin gene or a 4.1 kb Hpal-Xbal fragment containing the human 0-globin gene may be cloned into the pSELECT plasmid (Lewis et al., Nucl. Acids. Res. 18:3439- 3443, 1990; pSELECT is available from the American Type Culture Collection, Rockville, Maryland, ATCC# 68196) using standard methods (see e.g., Maniatis et al., 1989, Molecular Clpnjng; A Laboratory Manual, Cold Spring Harbor Laboratory, Cold Spring Harbor, NY) . Oligonucleotide mutagenesis is performed, e.g., as described by Lewis et al. (Nucl. Acids. Res. 18:3439-
3443, 1990). In this procedure, an oligonucleotide which corrects a mutation in the ampicillin resistance gene in the pSELECT plasmid is used simultaneously with one or more oligonucleotides designed to create mutations in the globin gene insert. Briefly, E. coli (JM109; ATCC# 53323) containing the pSELECT plasmid with globin gene inserts are infected with helper phage (M13K07) . After growing the culture overnight (about 12-16 hours) , phage obtained from the supernatant are extracted with phenol:chloroform, and single-stranded DNA is isolated by standard methods. Oligonucleotides containing each of the mutations are annealed to single-stranded DNA together with the wild- type ampicillin oligonucleotide, and these primers are extended with Klenow for about 90 minutes at 37°C.
Double-stranded DNA is transformed into E. coli (BMH 71- 18 mutS) , and the culture is grown overnight in L- broth containing 75 μg/ml ampicillin. DNA obtained from rapid lysis preparations of these cultures is transfected into E. coli (JM109) , and colonies are selected on ampicillin plates (75 μg/ml) . Double-stranded DNA obtained from rapid lysis preparations of these colonies is sequenced (Sanger et al., Proc. Natl. Acad. Sci. USA 74:5463-5467, 1977) using oligonucleotide primers located upstream of the mutagenic oligonucleotides. Mutants are clearly identified by comparison to wild-type sequence.
Construction of Cosmid Clones
The DNA constructs used for microinjection to produce transgenic animals are shown in Fig. 4, and were prepared as described by Behringer et al. (Science 245:971, 1989), except that the gene for sickle hemoglobin is replaced with genes encoding anti-sickling hemoglobins. Mutations are introduced into the human 0- globin gene by site-specific mutagenesis, as described above, and the mutant sequences are inserted downstream of a 22 kb DNA fragment containing the DNAse hypersensitive sites 1-5 (5' HS 1-5) of the 0-globin LCR (Lewis et al., Nucleic Acids Res. 18:3439, 1990), as described in further detail below.
In order to construct cos id clones containing mutant α- and 0-globin genes, the mutant genes are excised from pSELECT plasmids and subcloned into "right arm" plasmids containing a Cos site. Specifically, a 1.2 kb Ncol-Xbal fragment from the α-globin pSELECT plasmids and a 1.4 kb Clal-BamHI fragment from the 0-globin pSELECT plasmids are inserted into right arm plasmids in place of the corresponding α- and 0-globin gene wild-type fragments. The α-globin right arm plasmids are digested with Clal and Mlul, and 4.8 kb fragments containing mutant α-globin genes which are linked to Cos sites are purified by agarose gel electrophoresis. The 0-globin right arm plasmids are digested with Clal and Hindlll, and 6.5 kb fragments containing mutant 0-globin genes which are linked to Cos sites are purified similarly. Cosmids containing these fragments are constructed in four way ligations (Ryan et al.. Genes Dev. 3:314-323, 1989). The left arms are 9.0 kb Mlul-Sall fragments obtained from the cosmid vector pCVOOl (Lau et al., Proc. Natl. Acad. Sci. U.S.A. 80:5225-5229, 1983). This fragment contains a Cos site, an ampicillin resistance gene, a ColEl origin and the SVneo gene. The two internal fragments are a 10.7 kb Sall-Kpnl fragment containing DNase I super-hypersensitive (HS) sites V, IV and III, and a 10.9 kb KpnI-Clal fragment containing HS II and I. The four fragments are ligated together in a 2:1:1:2 molar ratio of vector arms to inserts and packaged (Packagene; Promega, Madison, WI) . E. coli ED8767 is infected with the packaged cosmids and is plated onto ampicillin plates. Large scale cultures of ampicillin resistant colonies are grown, and cosmids are prepared by standard procedures. Transgenic animal assays - Characterization of anti- sickling hemoglobins
The effects of anti-sickling hemoglobin can be analyzed using transgenic animals. Cosmid DNA is prepared by standard procedures. HS I-V α and HS I-V 0 cosmids containing the mutations described above are either injected directly into fertilized mouse eggs, or the constructs are digested with Sail and insert DNA is separated from plasmid DNA by agarose gel electrophoresis prior to injection. The injected eggs and transferred to pseudopregnant foster mothers (Brinster et al., Proc. Natl. Acad. Sci. USA 82:4438-4442, 1985), and transgenic progeny are identified by Southern blot hybridization of tail DNA. Similarly, large animal eggs can be injected with the same constructs and transferred to foster mothers as described by Pursel et al. (Science 244:1281- 1288, 1989). Typically, human α- and 0-globin genes are cloned into expression vectors designed to direct high levels of α- and 0-globin synthesis in erythroid cells of transgenic animals. These constructs are co-injected into fertilized mouse eggs and expression is analyzed in transgenic animals that develop.
Blood collected from transgenic animals is washed with saline, and hemolysates prepared as described by Ryan et al. (Science 245:971-973, 1990). Hemoglobin is analyzed on isoelectric focusing (IEF) gels (Ryan et al. , Science 245:971-973, 1990) to demonstrate that a complete human hemoglobin is formed in adult erythrocytes, and to identify transgenic animals which synthesize high levels of human hemoglobin (Ryan et al.. Science 247:566, 1990; Behringer et al.. Science 245:971, 1989). Human hemoglobin bands are excised from IEF gels and analyzed on urea cellulose acetate strips to demonstrate that the human hemoglobin band is composed of human α- and 0- globin polypeptides. It is noted that if human hemoglobin is difficult to separate from endogenous hemoglobins, mutations that increase or decrease the isoelectric point (pi) of human hemoglobin can be introduced into the α- and 0-globin genes. Increases in pi are accomplished by introducing basic (positively charged) amino acids into the protein, while decreases in pi are accomplished by introducing acidic (negatively charged) amino acids. These charged amino acids are introduced at positions which do not disturb the structure or function of the protein. Oxygen equilibrium curves (OECs) of human hemoglobin purified from the transgenic mice are determined as described by Ryan et al. (Science 247:566-568, 1990).
The anti-sickling properties of the AS hemoglobins (purified from erythrocytes of the above-described transgenic animals) can be quantitated by in vitro solubility assays as described, e.g., by Benesch et al. (J. Biol. Chem. 254:8169, 1979). Briefly, the anti- sickling hemoglobin is mixed with Hb S. The solution is cooled to 0°C, deoxygenated, and then incubated at 30°C for 2 to 3 hours. Insoluble polymers are pelleted by ultracentrifugation, and the concentration of hemoglobin in the supernatant is determined spectrophotometrically. The solubility of mutant hemoglobin/Hb S mixtures is compared with Hb A/Hb S and Hb F/Hb S solutions.
Characterisation of anti-sickling hemoglobins ASl and AS2 produced in transgenic mice
Transgenic lines expressing ASl or AS2 were established, and hemolysates obtained from several animals were analyzed by anion exchange high performance liquid chromatography (HPLC) to quantitate the amounts of human, mouse, and hybrid hemoglobins (Ip et al.. Anal. Biochem. 156:348, 1986; Hemoglobin tetramers were separated by anion exchange HPLC utilizing a Synchropak AN 300 (4.6 mm x 25 mm) column (SynChrom, Lafayette, IN)). Figs. 5A and 5C show that 28% of total hemoglobin was Hb ASl in one α0AS1 transgenic line, and 18% of total hemoglobin was Hb AS2 in one αø^2 transgenic line. Hemoglobins ASl and AS2 were isolated by preparative IEF (Behringer et al.. Science 245:971, 1989) and the purity of the human hemoglobins was assessed by denaturing reverse phase (HPLC) which separates the α- and 0-globin subunits (Adachi et al. , J. Chromat. 419:303, 1987. Mouse and human globins were separated by RP-HPLC using a Dionex Series 4500i HPLC system (Sunnyvale, CA) .
Approximately 25-30 μg of hemoglobin was injected into a Vydac C4 reversed phase column (4.6 mm x 250 mm; Hibernia, CA) and eluted with a linear gradient of acetonitrile and 0.3% trifluoroacetic acid as described in Shelton et al., J. Liq. Chrom. 7:1969, 1977). Figs. 5B and 5D show that Hb ASl was approximately 90% pure, while Hb AS2 was purified to homogeneity.
Oxygen equilibrium curves (OEC) for purified Hb ASl and Hb AS2 are illustrated in Figs. 6A and 6C (Asakura et al. in Oxygen Transport in Red Blood Cellsf C. Nicolau Ed. (Pergamin, New York, 1986) . Oxygen equilibrium curves were measured with a Hemox Analyzer (TCS, Southampton, PA). The OEC were determined in 0.1 M potassium phosphate buffer, pH 7.0 at 20°C) . The sigmoidally shaped curves demonstrate the normal cooperativity of oxygen binding (Figs. 6A and 6C) . The P50 value, which measures the partial pressure of oxygen at which hemoglobin is half-saturated, was determined for Hb ASl and Hb AS2 and compared with Hb A and Hb F (Table 1) . The P50 for Hb ASl is slightly elevated, but within the normal range, and this hemoglobin responds normally to the allosteric effector 2,3-diphosphoglycerate (2,3- DPG) ; that is, oxygen affinity is decreased in the presence of 2 mM 2,3-DPG (Fig. 6B) . The P50 for Hb AS2 is slightly lower than normal (6.7 mm Hg) but 2,3-DPG raises this value to 8.4 mm Hg. The oxygen affinity of Hb AS2 is functionally equivalent to Hb F in the presence of 2 mM 2,3-DPG (Fig. 6D) and, therefore, Hb AS2 should adequately bind and deliver oxygen in vivo.
Table 1. P50 values for recombinant and naturally- occurring human hemoglobins
Sample P50 (mm Hg) without PPG with PPG
Hb ASl 10.5 15.0
Hb AS2 6.7 8.4
Hb A 8.7 13.3
Hb F 8.8 10.0
Anti-sickling Properties of ASl and AS2 hemoglobins Hb S (100%) or mixtures of Hb S (75%) and Hb A, ASl, AS2, or F (25%) were deoxygenated and polymerization as a function of time was measured spectrophotometrically as the temperature of the hemoglobin solution was raised from 0°C to 30βC (Adachi et al., J. Biol. Chem. 254:7765, 1979; Adachi et al. , J. Biol. Chem. 255:7595, 1980; Kinetics of polymerization were determined in 1.8 M potassium phosphate buffer. Polymerization was initiated using the temperature jump method in which the temperature of deoxygenated hemoglobin solutions is rapidly changed from 0°C to 30°C and the time course of aggregation is monitored turbidimetrically at 700 nm) . Fig. 7A shows that Hb S polymerizes relatively rapidly and that Hb A, ASl, AS2, and F delay Hb S polymerization to different extents. Hb ASl inhibits Hb A polymerization more efficiently than Hb A; however, Hb ASl inhibits much less effectively than Hb F which is known to inhibit sickling in vivo at a 3:1 ratio (Noguchi et al., New Eng. J. Med. 318:96, 1988). Finally, Hb AS2 inhibits Hb S polymerization at approximately the same level as Hb F. This result strongly suggests that Hb AS2 will inhibit Hb S polymerization in vivo if expression of AS2 at a level of 25% of total hemoglobin can be achieved.
The delay times determined in Fig. 7A were all measured at a concentration of 60 mg/dl. Fig. 7B shows the results of similar experiments performed at variable concentrations of total hemoglobin. The ratio of Hb S to Hb A, ASl, AS2 or F in all of these experiments was 3:1. In this figure the log of the reciprocal of the delay time and the log of hemoglobin concentration are plotted. As reported previously (Hofrichter et al., Proc. Natl. Acad. Sci. USA 71:4864, 1974; Wishner et al., J. Mol. Biol. 98:179, 1975; Crepeau et al., Nature 274:616, 1978; Dykes et al., J. Mol. Biol. 130:451, 1979; Padlan et al., J. Biol. Chem. 260:8280, 198; and Eaton et al., Blood 70:1245, 1987) , an empirical relationship between delay time and hemoglobin concentration can be described by the following equation: l/td=γSn, where S=[Hb] otal/[Hb]soluble, and γ is an experimental constant. The n value is related to the size of nuclei formed during polymerization. The n values of the data shown in Fig. 7B are between 2 and 3, which agree well with those shown previously in high phosphate buffer (Adachi et al., J. Biol. Chem. 254:7765, 1979). At higher concentrations of hemoglobin, the delay times for Hb AS2 and Hb F overlap, indicating that Hb AS2 and Hb F have virtually identical anti-polymerization activity.
The results described above demonstrate that the genetic modification of two surface amino acids in Hb A produces a unique human hemoglobin (Hb AS2) that inhibits Hb S polymerization as effectively as Hb F. As discussed above, the 0-globin LCR enhances 0-globin gene expression much more effectively than γ-globin gene expression in adult erythroid cells. Therefore 0AS2, which is a 0- globin gene with the anti-polymerization properties of γ- globin, is a useful molecule for use in the method of the present invention.
It is understood that the examples and embodiments described herein are for illustrative purposes only and that various modifications or changes in light thereof will be suggested to persons skilled in the art and are to be included within the spirit and purview of this application and scope of the appended claims.
SEQUENCE LISTING (1) GENERAL INFORMATION: (i) APPLICANT: Townes, Tim M. Prchal, Josef T. Luhovy, Marian McCune, Steven L. Prchal, Jaraslov F.
(ϋ) TITLE OF INVENTION: TRANSDUCTION OF GENES INTO HUMAN HEMATOPOIETIC STEM CELLS USING RECOMBINANT ADENO- ASSOCIATED VIRAL VECTORS
(ϋi) NUMBER OF SEQUENCES: (iv) CORRESPONDENCE ADDRESS!
(A) ADDRESSEE: Fish & Richardson
(B) STREET: 225 Franklin Street
(C) CITY: Boston
(D) STATE: Massachusetts
(E) COUNTRY: U.S.A.
(F) ZIP: 02110-2804
(V) COMPUTER READABLE FORM:
(A) MEDIUM TYPE: 3.5" Diskette, 1.44 Mb
(B) COMPUTER: IBM PS/2 Model 50Z or 5SX
(C) OPERATING SYSTEM: MS-DOS (Version 5.0)
(D) SOFTWARE: WordPerfect (Version 5.1)
(Vi) CURRENT APPLICATION DATA:
(A) APPLICATION NUMBER:
(B) FILING DATE:
(C) CLASSIFICATION:
(Vϋ) PRIOR APPLICATION DATA:
(A) APPLICATION NUMBER:
(B) FILING DATE:
(Viii) ATTORNEY/AGENT INFORMATION:
(A) NAME: Clark, Paul T.
(B) REGISTRATION NUMBER: 30,162
(C) REFERENCE/DOCKET NUMBER:04005/012001 (ix) TELECOMMUNICATION INFORMATION:
(A) TELEPHONE: (617) 542-5070
(B) TELEFAX: (617) 542-8906
(C) TELEX: 200154 (2) INFORMATION FOR SEQUENCE IDENTIFICATION NUMBER: 1: (i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 27
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single (D) TOPOLOGY: linear
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 1: GTGAACGTGG ATGCCGTTGG TGGTGAG 27
(2) INFORMATION FOR SEQUENCE IDENTIFICATION NUMBER: 2:
(i) SEQUENCE CHARACTERISTICS: (A) LENGTH: 27
(B) TYPE: nucleic acid
(C) STRANDEDNESS: single
(D) TOPOLOGY: linear
( i) SEQUENCE DESCRIPTION: SEQ ID NO: 2: GCTCACCTGG ACAAGCTCAA GGGCACC 27
(2) INFORMATION FOR SEQUENCE IDENTIFICATION NUMBER: 3: (i) SEQUENCE CHARACTERISTICS:
(A) LENGTH: 27
(B) TYPE: nucleic acid (C) STRANDEDNESS: single
(D) TOPOLOGY: linear
(xi) SEQUENCE DESCRIPTION: SEQ ID NO: 3: GGCACCTTTG CCCAGCTGAG TGAGCTG 27
What is claimed is:

Claims

1. An adeno-associated viral vector made in a semi-packaging cell line, and comprising a nucleic acid encoding a therapeutic gene product, for use in therapy.
2. A hematopoietic cell comprising an adeno- associated viral vector made in a semi-packaging cell line, and comprising a nucleic acid encoding a therapeutic gene product, for use in therapy.
3. Use of an adeno-associated viral vector for the preparation of a medicament for use in therapy for a disease of hematopoietic cells in a mammal, said viral vector being made in a semi-packaging cell line and comprising a nucleic acid encoding a gene product capable of alleviating a symptom of said disease.
4. A hematopoietic cell comprising an adeno- associated viral vector for use in therapy for a disease of hematopoietic cells in a mammal, said adeno-associated viral vector being made in a semi-packaging cell line and comprising a nucleic acid encoding a gene product capable of alleviating a symptom of said disease.
5. The use of claim 2 or 4, wherein said hematopoietic cell comprising said adeno-associated viral vector is a hematopoietic stem cell.
6. The use of claim 3 or 4, wherein said disease is a hemoglobinopathy, Fanconis' anemia, adenosine deaminase deficiency, or acquired immune deficiency syndrome.
7. The use of claim 6, wherein said hemoglobinopathy is sickle cell anemia or 0-Thalassemia.
8. The use of claim 1, 2, 3, or 4, wherein said gene product is an anti-sickling hemoglobin, 0-globin, fetal γ-globin, the gene product of the Fanconis' Anemia C gene, adenosine deaminase, a ribozyme that cleaves HIV RNA, or RNA that is antisense to HIV RNA.
9. The use of claim 1, 2, 3, or 4, wherein said adeno-associated viral vector is produced from said semi- packaging cell line at a titer of at least 107 or
10s plaque-forming units/milliliter.
10. The use of claim l, 2 , 3 , or 4, wherein said semi-packaging cell line comprises the rep or cap genes of adeno-associated virus on an episomal vector.
11. A hematopoietic stem cell comprising an adeno-associated viral vector made in a semi-packaging cell line and comprising a nucleic acid encoding a gene product capable of alleviating a symptom of a disease of hematopoietic cells.
12. The hematopoietic stem cell of claim 11, wherein said gene product is an anti-sickling hemoglobin, 0-globin, fetal γ-globin, the gene product of the
Fanconis' Anemia C gene, adenosine deaminase, a ribozyme that cleaves HIV RNA, or RNA that is antisense to HIV RNA.
13. The hematopoietic stem cell of claim 11, wherein said adeno-associated viral vector is produced from said semi-packaging cell line at a titer of at least 107 or 108 plaque-forming units/milliliter.
14. The hematopoietic stem cell of claim 11, wherein said semi-packaging cell line comprises the rep or cap genes of adeno-associated virus on an episomal vector.
15. An adeno-associated viral vector made in a semi-packaging cell line and comprising a nucleic acid encoding a gene product capable of alleviating a symptom of a disease of hematopoietic cells.
16. The vector of claim 15, wherein said gene product is an anti-sickling hemoglobin, 0-globin, fetal γ-globin, the gene product of the Fanconis' Anemia C gene, adenosine deaminase, a ribozyme that cleaves HIV RNA, or RNA that is antisense to HIV RNA.
17. The vector of claim 15, wherein said adeno- associated viral vector is produced from said semi- packaging cell line at a titer of at least 107 or 108 plaque-forming units/milliliter.
18. The vector of claim 15, wherein said semi- packaging cell line comprises the rep or cap genes of adeno-associated virus on an episomal vector.
PCT/US1995/011858 1994-09-16 1995-09-18 Transduction of genes into human hematopoietic stem cells using recombinant adeno-associated viral vectors WO1996008560A1 (en)

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Cited By (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998024924A1 (en) * 1996-12-05 1998-06-11 Introgene B.V. Genetic modification of primate hemopoietic repopulating stem cells
WO2000034495A2 (en) * 1998-12-04 2000-06-15 City Of Hope A method of genetically modifying very primitive quiescent human hematopoietic stem cells
US6919209B1 (en) 1998-12-04 2005-07-19 City Of Hope Method of genetically modifying very primitive quiescent human hematopoietic stem cells
US10610606B2 (en) 2018-02-01 2020-04-07 Homology Medicines, Inc. Adeno-associated virus compositions for PAH gene transfer and methods of use thereof
US11306329B2 (en) 2018-02-19 2022-04-19 City Of Hope Adeno-associated virus compositions for restoring F8 gene function and methods of use thereof
US11952585B2 (en) 2020-01-13 2024-04-09 Homology Medicines, Inc. Methods of treating phenylketonuria

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPS5225834A (en) * 1975-08-20 1977-02-26 Hitachi Cable Ltd Adhesive
JPS6092379A (en) * 1983-10-27 1985-05-23 Daiabondo Kogyo Kk Hot-melt sealing agent composition for headlamp
WO1989006669A1 (en) * 1988-01-21 1989-07-27 Uniroyal Plastics Company, Inc. Adhesive for bonding cured epdm rubber
JPH06116539A (en) * 1991-10-01 1994-04-26 Shoei Kagaku Kogyo Kk Aqueous adhesive for polyolefin foam

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JPS5225834A (en) * 1975-08-20 1977-02-26 Hitachi Cable Ltd Adhesive
JPS6092379A (en) * 1983-10-27 1985-05-23 Daiabondo Kogyo Kk Hot-melt sealing agent composition for headlamp
WO1989006669A1 (en) * 1988-01-21 1989-07-27 Uniroyal Plastics Company, Inc. Adhesive for bonding cured epdm rubber
JPH06116539A (en) * 1991-10-01 1994-04-26 Shoei Kagaku Kogyo Kk Aqueous adhesive for polyolefin foam

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
DATABASE WPIL, no. 77-025 735, DERWENT PUBLICATIONS LTD., London; & JP,A,52 025 834 (HITACHI CABLE KK), *
DATABASE WPIL, no. 85-162 229, DERWENT PUBLICATIONS LTD., London; & JP,A,60 092 379 (DIABOND KOGYO KK), *
DATABASE WPIL, no. 94-173 978, DERWENT PUBLICATIONS LTD., London; & JP,A,06 116 539 (SHOEI KAGAKU KOGYO KK), *

Cited By (9)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO1998024924A1 (en) * 1996-12-05 1998-06-11 Introgene B.V. Genetic modification of primate hemopoietic repopulating stem cells
WO2000034495A2 (en) * 1998-12-04 2000-06-15 City Of Hope A method of genetically modifying very primitive quiescent human hematopoietic stem cells
WO2000034495A3 (en) * 1998-12-04 2002-09-26 Hope City A method of genetically modifying very primitive quiescent human hematopoietic stem cells
US6919209B1 (en) 1998-12-04 2005-07-19 City Of Hope Method of genetically modifying very primitive quiescent human hematopoietic stem cells
US10610606B2 (en) 2018-02-01 2020-04-07 Homology Medicines, Inc. Adeno-associated virus compositions for PAH gene transfer and methods of use thereof
US11951183B2 (en) 2018-02-01 2024-04-09 Homology Medicines, Inc. Adeno-associated virus compositions for PAH gene transfer and methods of use thereof
US11306329B2 (en) 2018-02-19 2022-04-19 City Of Hope Adeno-associated virus compositions for restoring F8 gene function and methods of use thereof
US11891619B2 (en) 2018-02-19 2024-02-06 City Of Hope Adeno-associated virus compositions for restoring F8 gene function and methods of use thereof
US11952585B2 (en) 2020-01-13 2024-04-09 Homology Medicines, Inc. Methods of treating phenylketonuria

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